>gb|AY549888.2| Triticum aestivum putative proteinase inhibitor-related protein
           (wrsi5-1) mRNA, complete cds
          Length = 608

 Score =  476 bits (240), Expect = e-131
 Identities = 304/325 (93%), Gaps = 1/325 (0%)
 Strand = Plus / Plus

                                                                       
Query: 27  accgcacaggtaaagctcgagctttgcgctaagagagttcatcggcagccatgaagagca 86
           ||||||||||| |||   |||||||||||||| || ||||||| |||  |||||||||||
Sbjct: 38  accgcacaggtgaagtgagagctttgcgctaa-agggttcatcagcaagcatgaagagca 96

                                                                       
Query: 87  ccaagctcgcggcgatcctgatcctccaggccgtcctggtcatggggatcctctcccacg 146
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 97  ccaagctcgcggcgatcctgatcctccaggccgtcctggtcatggggatcctctcacacg 156

                                                                       
Query: 147 ttaacgccgacttcttccccaagtgctgcaacaactgcaggtccttctcgggggtcgacg 206
           | ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 157 tgaacgccgacttcttccccaagtgctgcaacaactgcaggtccttctccggggtcgacg 216

                                                                       
Query: 207 tctgcgacgacgcccacccccagtgccccaagggctgctccgcctgccgcgtggtgaccc 266
           |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 217 tctgcgacgacgcccacccccagtgccccaagggctgctcggcctgccgcgtggtgacgc 276

                                                                       
Query: 267 cgagccctcacaagacgttccgctgcgccgacatgaagagcaccgtnnacggcacctgcg 326
           | |||||||||||||||||||| |||||||||||||||||||||||  | ||||||||||
Sbjct: 277 ccagccctcacaagacgttccggtgcgccgacatgaagagcaccgtcgatggcacctgcg 336

                                    
Query: 327 gnggcccatgcaaaaagcactgatc 351
           | || ||||||||||||||||||||
Sbjct: 337 gcgggccatgcaaaaagcactgatc 361

>emb|Z48729.1|HVBSI1 H.vulgare Bsi1 gene for putative protease inhibitor
          Length = 498

 Score =  305 bits (154), Expect = 5e-80
 Identities = 255/289 (88%), Gaps = 3/289 (1%)
 Strand = Plus / Plus

                                                                       
Query: 66  catcggcagccatgaagagcaccaagctcgcggcgatcctgatcctccaggccgtcctgg 125
           |||| ||| |||||||| ||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1   catcagcaaccatgaagggcaccaagctcgcggcgattctgatcctccaggccgtcctgg 60

                                                                       
Query: 126 tcatggggatcctctcccacgttaacgccgacttcttccccaagtgctgcaacaactgca 185
           |||||||  ||||||| ||||| ||||||| ||  ||||||| |||||||||||||||||
Sbjct: 61  tcatgggagtcctctcgcacgtgaacgccgtctatttccccacgtgctgcaacaactgca 120

                                                                       
Query: 186 ggtccttctcgggggtcgacgtctgcgacgacgcccacccccagtgccccaagggctgct 245
           |||||||||| |||||||||||||||||||||||||| || ||||||||||  |||||||
Sbjct: 121 ggtccttctccggggtcgacgtctgcgacgacgcccatccgcagtgccccaccggctgct 180

                                                                       
Query: 246 ccgcctgccgcgtggtgaccccgagccctcacaagacgttccgctgcgccgacatgaaga 305
           | || ||||||||||||||| ||| |||   | |||||||||||||||||||||||||  
Sbjct: 181 cggcgtgccgcgtggtgaccacgaaccc---ccagacgttccgctgcgccgacatgaaag 237

                                                            
Query: 306 gcaccgtnnacggcacctgcggnggcccatgcaaaaagcactgatcgct 354
            ||||||  ||||||||||||| || |||||||| ||| ||||||||||
Sbjct: 238 ccaccgtcgacggcacctgcggcgggccatgcaagaagtactgatcgct 286

>gb|L11882.1|WHTWALI5A Triticum aestivum protein of unknown function (wali5) mRNA,
           complete cds
          Length = 520

 Score =  278 bits (140), Expect = 1e-71
 Identities = 176/188 (93%)
 Strand = Plus / Plus

                                                                       
Query: 75  ccatgaagagcaccaagctcgcggcgatcctgatcctccaggccgtcctggtcatgggga 134
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  
Sbjct: 71  ccatgaagggcaccaagctcgcggcgatcctgatcctccaggccgtcctggtcatgggac 130

                                                                       
Query: 135 tcctctcccacgttaacgccgacttcttccccaagtgctgcaacaactgcaggtccttct 194
           ||||||| ||||| |||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 131 tcctctcacacgtgaacgccgattttttccccaagtgctgcaacaactgcaggtccttct 190

                                                                       
Query: 195 cgggggtcgacgtctgcgacgacgcccacccccagtgccccaagggctgctccgcctgcc 254
           |||||||||||||||||||||||||||||||| |||| ||| |||||||||| || ||||
Sbjct: 191 cgggggtcgacgtctgcgacgacgcccaccccaagtgtccccagggctgctcggcgtgcc 250

                   
Query: 255 gcgtggtg 262
           ||||||||
Sbjct: 251 gcgtggtg 258

>gb|L28009.1|WHTWALIA Triticum aestivum (wali6) mRNA, complete cds
          Length = 585

 Score =  117 bits (59), Expect = 3e-23
 Identities = 133/157 (84%), Gaps = 3/157 (1%)
 Strand = Plus / Plus

                                                                       
Query: 77  atgaagagcaccaagctcgcggcgatcctgatcctccaggccgtcctggtcatggggatc 136
           |||||||| | || ||||| |||||||||||| ||||||||||||||||||||||| |||
Sbjct: 76  atgaagagtagcacgctcgtggcgatcctgattctccaggccgtcctggtcatgggaatc 135

                                                                       
Query: 137 ctctcccacgttaacgccgacttcttccccaagtgctgcaacaactgcaggtccttctcg 196
           ||||| || |  ||||||||    ||||| || |||||| |||||||||||| |||||||
Sbjct: 136 ctctcacaggcgaacgccga---gttcccgaaatgctgcgacaactgcaggttcttctcg 192

                                                
Query: 197 ggggtcgacgtctgcgacgacgcccacccccagtgcc 233
           |||| ||  |||||||||||||||  |||| ||||||
Sbjct: 193 ggggccgtggtctgcgacgacgccggccccaagtgcc 229

>gb|L11881.1|WHTWALI3A Triticum aestivum protein of unknown function (wali3) mRNA,
           complete cds
          Length = 564

 Score =  109 bits (55), Expect = 6e-21
 Identities = 114/133 (85%), Gaps = 3/133 (2%)
 Strand = Plus / Plus

                                                                       
Query: 101 atcctgatcctccaggccgtcctggtcatggggatcctctcccacgttaacgccgacttc 160
           ||||||||||| |||||||||||||||||||| |||||||| || |  |||||||| |||
Sbjct: 79  atcctgatccttcaggccgtcctggtcatgggaatcctctcacaggcgaacgccgagttc 138

                                                                       
Query: 161 ttccccaagtgctgcaacaactgcaggtccttctcgggggtcgacgtctgcgacgacgcc 220
              |||||||||||| |||||||||||| ||||||||||| ||  |||||||| ||||||
Sbjct: 139 ---cccaagtgctgcgacaactgcaggttcttctcgggggccgtggtctgcgatgacgcc 195

                        
Query: 221 cacccccagtgcc 233
             |||| ||||||
Sbjct: 196 ggccccaagtgcc 208

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 55/62 (88%)
 Strand = Plus / Minus

                                                                           
Query: 74      gccatgaagagcaccaagctcgcggcgatcctgatcctccaggccgtcctggtcatgggg 133
               ||||||||||||| || ||||  || ||||||| | ||||||||||||||||||||||||
Sbjct: 1757733 gccatgaagagcagcacgctcatggtgatcctggttctccaggccgtcctggtcatgggg 1757674

                 
Query: 134     at 135
               ||
Sbjct: 1757673 at 1757672

>dbj|AP002526.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0504H10
          Length = 143515

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 55/62 (88%)
 Strand = Plus / Minus

                                                                          
Query: 74     gccatgaagagcaccaagctcgcggcgatcctgatcctccaggccgtcctggtcatgggg 133
              ||||||||||||| || ||||  || ||||||| | ||||||||||||||||||||||||
Sbjct: 100076 gccatgaagagcagcacgctcatggtgatcctggttctccaggccgtcctggtcatgggg 100017

                
Query: 134    at 135
              ||
Sbjct: 100016 at 100015

>ref|NM_184249.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 306

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 52/59 (88%)
 Strand = Plus / Plus

                                                                      
Query: 77  atgaagagcaccaagctcgcggcgatcctgatcctccaggccgtcctggtcatggggat 135
           |||||||||| || ||||  || ||||||| | ||||||||||||||||||||||||||
Sbjct: 1   atgaagagcagcacgctcatggtgatcctggttctccaggccgtcctggtcatggggat 59

>gb|AY641412.1| Hordeum vulgare subsp. vulgare retrotransposon Sandra5, complete
             sequence; splicing factor SF2-like protein (SF2) and
             universal stress protein (USP1) genes and Hv
             receptor-kinase-like pseudogene, complete cds; and
             retrotransposons Sandra6 and Sandra7, complete sequence
          Length = 82293

 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                                 
Query: 108   tcctccaggccgtcctggtcatggggatcctctccc 143
             ||||||||||| ||||||||||||| ||||||||||
Sbjct: 71810 tcctccaggccatcctggtcatgggaatcctctccc 71845

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 46.1 bits (23), Expect = 0.076
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                       
Query: 120      tcctggtcatggggatcctctcc 142
                |||||||||||||||||||||||
Sbjct: 25930562 tcctggtcatggggatcctctcc 25930540

>dbj|AP003568.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0017B12
          Length = 157424

 Score = 46.1 bits (23), Expect = 0.076
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 120   tcctggtcatggggatcctctcc 142
             |||||||||||||||||||||||
Sbjct: 85660 tcctggtcatggggatcctctcc 85638

>dbj|AK070101.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023044I16, full
           insert sequence
          Length = 2261

 Score = 46.1 bits (23), Expect = 0.076
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 120 tcctggtcatggggatcctctcc 142
           |||||||||||||||||||||||
Sbjct: 818 tcctggtcatggggatcctctcc 840

>gb|CP000133.1| Rhizobium etli CFN 42, complete genome
          Length = 4381608

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 95      gcggcgatcctgatcctccaggccg 119
               |||||||||||||||||||| ||||
Sbjct: 1946744 gcggcgatcctgatcctccacgccg 1946720

>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 166     caagtgctgcaacaactgca 185
               ||||||||||||||||||||
Sbjct: 2027891 caagtgctgcaacaactgca 2027872

>ref|XM_753018.1| Ustilago maydis 521 hypothetical protein (UM01964.1) partial mRNA
          Length = 1812

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 70  ggcagccatgaagagcacca 89
           ||||||||||||||||||||
Sbjct: 267 ggcagccatgaagagcacca 248

>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 283    gttccgctgcgccgacatga 302
              ||||||||||||||||||||
Sbjct: 807673 gttccgctgcgccgacatga 807692

>dbj|BS000238.1| Pan troglodytes chromosome 22 clone:PTB-016O01, map 22, complete
              sequences
          Length = 168017

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 216    acgcccacccccagtgcccc 235
              ||||||||||||||||||||
Sbjct: 156620 acgcccacccccagtgcccc 156639

>gb|AF042096.3|AF042096 Bradyrhizobium japonicum UbiE (ubiE) gene, partial cds; AarF (aarF),
            panthotenate metabolism flavoprotein (dfp),
            deoxyuridine-triphosphatase (dut), putative sensor
            protein (bdfA), GalF-like (galF), hypothetical protein
            genes, complete cds; putative helicase 2 gene, partial
            cds; and unknown genes
          Length = 13289

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 283  gttccgctgcgccgacatga 302
            ||||||||||||||||||||
Sbjct: 8366 gttccgctgcgccgacatga 8347

>emb|AL954242.1|PTB109N16 Pan troglodytes chromosome 22 BAC PTB-109N16, complete sequence
          Length = 190477

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 216   acgcccacccccagtgcccc 235
             ||||||||||||||||||||
Sbjct: 61446 acgcccacccccagtgcccc 61465

>emb|AM118080.1| Ustilago hordei mating type region MAT-1, strain 364
          Length = 526707

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 72     cagccatgaagagcaccaagctcg 95
              ||||||||||||| ||||||||||
Sbjct: 158311 cagccatgaagaggaccaagctcg 158334


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,162,006
Number of Sequences: 3902068
Number of extensions: 2162006
Number of successful extensions: 41008
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 40822
Number of HSP's gapped (non-prelim): 182
length of query: 354
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 332
effective length of database: 17,147,199,772
effective search space: 5692870324304
effective search space used: 5692870324304
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)