ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal9j12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1DB130_PANTR (Q30KJ9) Beta-defensin 130 precursor (Defensin, beta... 30 6.8
2DB130_HUMAN (Q30KQ2) Beta-defensin 130 precursor (Defensin, beta... 30 6.8

>DB130_PANTR (Q30KJ9) Beta-defensin 130 precursor (Defensin, beta 130)|
          Length = 79

 Score = 30.0 bits (66), Expect = 6.8
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -3

Query: 592 CNRVRSCCRRWWL 554
           CN  + CCRRWW+
Sbjct: 53  CNEGKKCCRRWWI 65



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>DB130_HUMAN (Q30KQ2) Beta-defensin 130 precursor (Defensin, beta 130)|
           (Beta-defensin 30) (DEFB-30)
          Length = 79

 Score = 30.0 bits (66), Expect = 6.8
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -3

Query: 592 CNRVRSCCRRWWL 554
           CN  + CCRRWW+
Sbjct: 53  CNEGKKCCRRWWI 65


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 97,351,431
Number of Sequences: 219361
Number of extensions: 1973331
Number of successful extensions: 4540
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4397
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4540
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6712189044
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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