ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags13j12 |
|---|---|
| Clone Library Name | barley_pub |
>VATH_ARATH (Q9LX65) Probable vacuolar ATP synthase subunit H (EC 3.6.3.14)| (V-ATPase H subunit) (Vacuolar proton pump H subunit) (Vacuolar proton pump subunit SFD) Length = 441 Score = 257 bits (656), Expect = 2e-68 Identities = 127/190 (66%), Positives = 153/190 (80%) Frame = +2 Query: 26 VFLNILRSISKEETVEYVLALIDEMLAANPKRAALFYDKSLSGEDIYDPFLRLLLKGNWF 205 +F++ILR I KEETVEYVLALI EML+ANP RA LF+D+SL+ ED Y+PFLRLL KGNWF Sbjct: 60 LFVSILRDIFKEETVEYVLALIYEMLSANPTRARLFHDESLANEDTYEPFLRLLWKGNWF 119 Query: 206 VQEKSCKILTHLISARPKLQNGMVPNGEASNSKSKLTSIHDVLKGLVDWLCSQLRNPTHP 385 +QEKSCKIL +ISARPK N ++ NG I DVLKGLV+WLC+QL+ P+HP Sbjct: 120 IQEKSCKILAWIISARPKAGNAVIGNG-----------IDDVLKGLVEWLCAQLKQPSHP 168 Query: 386 NCSIPTATHCLATLLKETYVRTLFVQADGVKLLIPLISPASTQQSIQLLYETCLCIWLLS 565 +P A CL++LLKE VR+ FVQADGVKLL+PLISPASTQQSIQLLYETCLCIWLLS Sbjct: 169 TRGVPIAISCLSSLLKEPVVRSSFVQADGVKLLVPLISPASTQQSIQLLYETCLCIWLLS 228 Query: 566 FYDAAVDYLS 595 +Y+ A++YL+ Sbjct: 229 YYEPAIEYLA 238
>VATH_MANSE (Q9U5N0) Vacuolar ATP synthase subunit H (EC 3.6.3.14) (V-ATPase H| subunit) (Vacuolar proton pump H subunit) (Vacuolar proton pump subunit SFD) Length = 475 Score = 86.7 bits (213), Expect = 5e-17 Identities = 54/181 (29%), Positives = 95/181 (52%) Frame = +2 Query: 26 VFLNILRSISKEETVEYVLALIDEMLAANPKRAALFYDKSLSGEDIYDPFLRLLLKGNWF 205 VFLN+L ISK+ T++Y+L LID++L+ + R +F + SG +I+ PFL LL + + F Sbjct: 83 VFLNLLTHISKDHTIQYILVLIDDILSEDKSRVKIFRETKYSG-NIWQPFLNLLNRQDEF 141 Query: 206 VQEKSCKILTHLISARPKLQNGMVPNGEASNSKSKLTSIHDVLKGLVDWLCSQLRNPTHP 385 VQ + +I+ L P+L + + +H L WL QL+ + Sbjct: 142 VQHMTARIIAKLACWHPQLMD--------------KSDLHFYL----SWLKDQLK--MNN 181 Query: 386 NCSIPTATHCLATLLKETYVRTLFVQADGVKLLIPLISPASTQQSIQLLYETCLCIWLLS 565 N I + CL +L+ R F+ DG+ L+ ++ +++ + Q+ Y+ C+W+L+ Sbjct: 182 NDYIQSVARCLQMMLRVDEYRFAFLSVDGISTLLSIL---ASRVNFQVQYQLVFCLWVLT 238 Query: 566 F 568 F Sbjct: 239 F 239
>VATH_MOUSE (Q8BVE3) Vacuolar ATP synthase subunit H (EC 3.6.3.14) (V-ATPase H| subunit) (Vacuolar proton pump H subunit) Length = 483 Score = 72.4 bits (176), Expect = 9e-13 Identities = 51/189 (26%), Positives = 98/189 (51%), Gaps = 1/189 (0%) Frame = +2 Query: 29 FLNILRSISKEETVEYVLALIDEMLAANPKRAALFYDKSLSGEDIYDP-FLRLLLKGNWF 205 F+N++ ISKE+TV+Y+L ++D+ML N +R ++F+D + + P FL +L + + F Sbjct: 77 FINLMTHISKEQTVQYILTMVDDMLQENHQRVSIFFDYAKRSKSTAWPYFLPMLNRQDPF 136 Query: 206 VQEKSCKILTHLISARPKLQNGMVPNGEASNSKSKLTSIHDVLKGLVDWLCSQLRNPTHP 385 + +I+ L + +L G N + K++L+S L+G + + + + Sbjct: 137 TVHMAARIIAKLAAWGKELMEGSDLNYYFNWIKTQLSS--QKLRGSGVAVETGTISSSDS 194 Query: 386 NCSIPTATHCLATLLKETYVRTLFVQADGVKLLIPLISPASTQQSIQLLYETCLCIWLLS 565 + + CL +L+ R +V+ADGV ++ ++ S + QL Y+ IWLL+ Sbjct: 195 SQYVQCVAGCLQLMLRVNEYRFAWVEADGVNCIMGVL---SNKCGFQLQYQMIFSIWLLA 251 Query: 566 FYDAAVDYL 592 F ++L Sbjct: 252 FSPQMCEHL 260
>VATH_DROME (Q9V3J1) Vacuolar ATP synthase subunit H (EC 3.6.3.14) (V-ATPase H| subunit) (Vacuolar proton pump H subunit) (Vacuolar proton pump subunit SFD) Length = 468 Score = 72.0 bits (175), Expect = 1e-12 Identities = 54/185 (29%), Positives = 88/185 (47%), Gaps = 1/185 (0%) Frame = +2 Query: 17 VCSVFLNILRSISKEETVEYVLALIDEMLAANPKRAALFYDKS-LSGEDIYDPFLRLLLK 193 V LN++ +SK+ T++Y+L L+D++L + R LF+D + + I+ PFL LL + Sbjct: 70 VVKTLLNLVSHLSKDSTIQYILVLLDDLLQEDRSRVDLFHDTAGKLKQCIWGPFLNLLNR 129 Query: 194 GNWFVQEKSCKILTHLISARPKLQNGMVPNGEASNSKSKLTSIHDVLKGLVDWLCSQLRN 373 + F+ S +IL G + KS L LK D L S Sbjct: 130 QDGFIVNMSSRILAKFACW-----------GHETMPKSDLNFYLQFLK---DQLAS---- 171 Query: 374 PTHPNCSIPTATHCLATLLKETYVRTLFVQADGVKLLIPLISPASTQQSIQLLYETCLCI 553 + N I + CL +L+ R FV DG+ LI ++ ST+ + Q+ Y+ C+ Sbjct: 172 --NNNEYIQSVARCLQMMLRVDEYRFAFVGVDGISTLIRIL---STRVNFQVQYQLIFCL 226 Query: 554 WLLSF 568 W+L+F Sbjct: 227 WVLTF 231
>VATH_HUMAN (Q9UI12) Vacuolar ATP synthase subunit H (EC 3.6.3.14) (V-ATPase H| subunit) (Vacuolar proton pump H subunit) (V-ATPase 50/57 kDa subunits) (Vacuolar proton pump subunit SFD) (VMA13) (Nef-binding protein 1) (NBP1) Length = 483 Score = 70.9 bits (172), Expect = 3e-12 Identities = 50/189 (26%), Positives = 98/189 (51%), Gaps = 1/189 (0%) Frame = +2 Query: 29 FLNILRSISKEETVEYVLALIDEMLAANPKRAALFYDKSLSGEDIYDP-FLRLLLKGNWF 205 F+N++ I KE+TV+Y+L ++D+ML N +R ++F+D + ++ P FL +L + + F Sbjct: 77 FINLMTHICKEQTVQYILTMVDDMLQENHQRVSIFFDYARCSKNTAWPYFLPMLNRQDPF 136 Query: 206 VQEKSCKILTHLISARPKLQNGMVPNGEASNSKSKLTSIHDVLKGLVDWLCSQLRNPTHP 385 + +I+ L + +L G N + K++L+S L+G + + + + Sbjct: 137 TVHMAARIIAKLAAWGKELMEGSDLNYYFNWIKTQLSS--QKLRGSGVAVETGTVSSSDS 194 Query: 386 NCSIPTATHCLATLLKETYVRTLFVQADGVKLLIPLISPASTQQSIQLLYETCLCIWLLS 565 + + CL +L+ R +V+ADGV ++ ++ S + QL Y+ IWLL+ Sbjct: 195 SQYVQCVAGCLQLMLRVNEYRFAWVEADGVNCIMGVL---SNKCGFQLQYQMIFSIWLLA 251 Query: 566 FYDAAVDYL 592 F ++L Sbjct: 252 FSPQMCEHL 260
>VATH_BOVIN (O46563) Vacuolar ATP synthase subunit H (EC 3.6.3.14) (V-ATPase H| subunit) (Vacuolar proton pump H subunit) (V-ATPase 50/57 kDa subunits) (Vacuolar proton pump subunit SFD) Length = 483 Score = 70.5 bits (171), Expect = 4e-12 Identities = 50/189 (26%), Positives = 95/189 (50%), Gaps = 1/189 (0%) Frame = +2 Query: 29 FLNILRSISKEETVEYVLALIDEMLAANPKRAALFYD-KSLSGEDIYDPFLRLLLKGNWF 205 F+N++ ISKE+TV+Y+L L+D+ L N +R ++F+D S + FL +L + + F Sbjct: 77 FINLMTHISKEQTVQYILTLVDDTLQENHQRVSIFFDYAKRSKNTAWSYFLPMLNRQDLF 136 Query: 206 VQEKSCKILTHLISARPKLQNGMVPNGEASNSKSKLTSIHDVLKGLVDWLCSQLRNPTHP 385 + +I+ L + +L G N + K++L+S L+G + + + Sbjct: 137 TVHMTARIIAKLAAWGKELMEGSDLNYYFNWIKTQLSS--QKLRGSGVTAETGTVSSSDS 194 Query: 386 NCSIPTATHCLATLLKETYVRTLFVQADGVKLLIPLISPASTQQSIQLLYETCLCIWLLS 565 + + CL +L+ R +V+ADGV ++ ++ S + QL Y+ +WLL+ Sbjct: 195 SQYVQCVAGCLQLMLRVNEYRFAWVEADGVNCIMGVL---SNKCGFQLQYQMIFSVWLLA 251 Query: 566 FYDAAVDYL 592 F ++L Sbjct: 252 FSPQMCEHL 260
>VATH_PIG (Q9TVC1) Vacuolar ATP synthase subunit H (EC 3.6.3.14) (V-ATPase H| subunit) (Vacuolar proton pump H subunit) (V-ATPase 50/57 kDa subunits) (Vacuolar proton pump subunit SFD) Length = 483 Score = 70.1 bits (170), Expect = 5e-12 Identities = 50/189 (26%), Positives = 95/189 (50%), Gaps = 1/189 (0%) Frame = +2 Query: 29 FLNILRSISKEETVEYVLALIDEMLAANPKRAALFYD-KSLSGEDIYDPFLRLLLKGNWF 205 F+N++ ISKE+TV+Y+L ++D+ L N +R ++F+D S + FL +L + + F Sbjct: 77 FINLMTHISKEQTVQYILTMVDDTLQENHQRVSIFFDYAKRSKNTAWSYFLPMLNRQDLF 136 Query: 206 VQEKSCKILTHLISARPKLQNGMVPNGEASNSKSKLTSIHDVLKGLVDWLCSQLRNPTHP 385 + +I+ L + +L G N + K++L S L+G + + + + Sbjct: 137 TVHMAARIIAKLAAWGKELMEGSDLNYYFNWIKTQLAS--QKLRGSGVAVETGTVSSSDS 194 Query: 386 NCSIPTATHCLATLLKETYVRTLFVQADGVKLLIPLISPASTQQSIQLLYETCLCIWLLS 565 + + CL +L+ R +V+ADGV ++ ++ S + QL Y+ IWLL+ Sbjct: 195 SQYVQCVAGCLQLMLRVNEYRFAWVEADGVNCIMGVL---SNKCGFQLQYQMIFSIWLLA 251 Query: 566 FYDAAVDYL 592 F ++L Sbjct: 252 FSPQMCEHL 260
>VATH2_CAEEL (Q22494) Probable vacuolar ATP synthase subunit H 2 (EC 3.6.3.14)| (V-ATPase H subunit 2) (Vacuolar proton pump H subunit 2) (Vacuolar proton pump subunit SFD 2) Length = 470 Score = 57.4 bits (137), Expect = 3e-08 Identities = 43/179 (24%), Positives = 78/179 (43%), Gaps = 1/179 (0%) Frame = +2 Query: 35 NILRSISKEETVEYVLALIDEMLAANPKRAALFYDKSL-SGEDIYDPFLRLLLKGNWFVQ 211 N++ ++K++ V YVL L D+ML + R LF+ + ++ +L +L + + F+ Sbjct: 83 NLITQVAKDQNVRYVLTLFDDMLQEDKSRVELFHSAAARQKRTVWSQYLGILQRQDNFIV 142 Query: 212 EKSCKILTHLISARPKLQNGMVPNGEASNSKSKLTSIHDVLKGLVDWLCSQLRNPTHPNC 391 + I+ L G L+ +L QL+N T N Sbjct: 143 NQMSSIIAKLACFGTTRMEG------------------QDLQYYFSFLKEQLKNST-TND 183 Query: 392 SIPTATHCLATLLKETYVRTLFVQADGVKLLIPLISPASTQQSIQLLYETCLCIWLLSF 568 + T CL +L+ R FV +DGV+ L+ + + + + QL Y+ +W L+F Sbjct: 184 YMNTTARCLQMMLRHDEYRHEFVDSDGVQTLVTAL---NGKTNFQLQYQLIFAVWCLTF 239
>VATH1_CAEEL (Q20666) Probable vacuolar ATP synthase subunit H 1 (EC 3.6.3.14)| (V-ATPase H subunit 1) (Vacuolar proton pump H subunit 1) (Vacuolar proton pump subunit SFD 1) Length = 451 Score = 52.8 bits (125), Expect = 8e-07 Identities = 49/187 (26%), Positives = 80/187 (42%), Gaps = 1/187 (0%) Frame = +2 Query: 29 FLNILRSISKEETVEYVLALIDEMLAANPKRAALFYDKS-LSGEDIYDPFLRLLLKGNWF 205 F++++ ISK++ V Y L LID+ML + R +F D + L + F+ LL + + + Sbjct: 72 FVHLMSQISKDDYVRYTLTLIDDMLREDVTRTIIFEDVAVLLKRSPFSFFMGLLHRQDQY 131 Query: 206 VQEKSCKILTHLISARPKLQNGMVPNGEASNSKSKLTSIHDVLKGLVDWLCSQLRNPTHP 385 + + ILT M G S +L LK + N Sbjct: 132 IVHITFSILTK-----------MAVFGNIKLSGDELDYCMGSLK--------EAMNRGTN 172 Query: 386 NCSIPTATHCLATLLKETYVRTLFVQADGVKLLIPLISPASTQQSIQLLYETCLCIWLLS 565 N I TA C+ TL + R FV +G L + ++ + Q+ Y+ C+WLL+ Sbjct: 173 NDYIVTAVRCMQTLFRFDPYRVSFVNINGYDSLTHALY-STRKCGFQIQYQIIFCMWLLT 231 Query: 566 FYDAAVD 586 F A + Sbjct: 232 FNGHAAE 238
>XPO4_MOUSE (Q9ESJ0) Exportin-4 (Exp4)| Length = 1151 Score = 31.6 bits (70), Expect = 1.8 Identities = 22/59 (37%), Positives = 32/59 (54%) Frame = +2 Query: 71 EYVLALIDEMLAANPKRAALFYDKSLSGEDIYDPFLRLLLKGNWFVQEKSCKILTHLIS 247 +YV I +A KR +L DKS+ + I+ +L+ GN VQ +C ILT L+S Sbjct: 109 KYVREQILLAVAVIVKRGSL--DKSIDCKSIFHEVSQLISSGNPTVQTLACSILTALLS 165
>XPO4_HUMAN (Q9C0E2) Exportin-4 (Exp4)| Length = 1151 Score = 31.6 bits (70), Expect = 1.8 Identities = 22/59 (37%), Positives = 32/59 (54%) Frame = +2 Query: 71 EYVLALIDEMLAANPKRAALFYDKSLSGEDIYDPFLRLLLKGNWFVQEKSCKILTHLIS 247 +YV I +A KR +L DKS+ + I+ +L+ GN VQ +C ILT L+S Sbjct: 109 KYVREQILLAVAVIVKRGSL--DKSIDCKSIFHEVSQLISSGNPTVQTLACSILTALLS 165
>Y1756_XYLFT (Q87AR6) Hypothetical UPF0169 lipoprotein PD1756 precursor| Length = 293 Score = 31.6 bits (70), Expect = 1.8 Identities = 26/84 (30%), Positives = 31/84 (36%) Frame = +2 Query: 137 DKSLSGEDIYDPFLRLLLKGNWFVQEKSCKILTHLISARPKLQNGMVPNGEASNSKSKLT 316 D + E +YD L+ KGNW E S K L P + MV N A K Sbjct: 36 DDGMPVEHLYDKAHTLMKKGNWAGAELSFKRLIAQYPYGPYTEQAMVENAYAQYKSGK-- 93 Query: 317 SIHDVLKGLVDWLCSQLRNPTHPN 388 HD +D PTH N Sbjct: 94 --HDDAVSSIDRFIRTY--PTHHN 113
>Y938_XYLFA (Q9PEU0) Hypothetical UPF0169 lipoprotein Xf0938 precursor| Length = 292 Score = 31.6 bits (70), Expect = 1.8 Identities = 26/84 (30%), Positives = 31/84 (36%) Frame = +2 Query: 137 DKSLSGEDIYDPFLRLLLKGNWFVQEKSCKILTHLISARPKLQNGMVPNGEASNSKSKLT 316 D + E +YD L+ KGNW E S K L P + MV N A K Sbjct: 36 DDGMPVEHLYDKAHTLMKKGNWAGAEVSFKRLIAQYPYGPYTEQAMVENAYAQYKSGK-- 93 Query: 317 SIHDVLKGLVDWLCSQLRNPTHPN 388 HD +D PTH N Sbjct: 94 --HDDAVSSIDRFIRTY--PTHHN 113
>RBM10_RAT (P70501) RNA-binding protein 10 (RNA-binding motif protein 10)| (S1-1 protein) Length = 852 Score = 30.4 bits (67), Expect = 4.0 Identities = 18/47 (38%), Positives = 26/47 (55%) Frame = +2 Query: 269 GMVPNGEASNSKSKLTSIHDVLKGLVDWLCSQLRNPTHPNCSIPTAT 409 G G A+NS+S VLK S+L++PTHP+ ++P AT Sbjct: 436 GSSGQGTATNSQSYTIMSPAVLK-------SELQSPTHPSSALPPAT 475
>RBM10_HUMAN (P98175) RNA-binding protein 10 (RNA-binding motif protein 10)| (DXS8237E) Length = 929 Score = 30.0 bits (66), Expect = 5.3 Identities = 17/42 (40%), Positives = 25/42 (59%) Frame = +2 Query: 284 GEASNSKSKLTSIHDVLKGLVDWLCSQLRNPTHPNCSIPTAT 409 G A+NS+S VLK S+L++PTHP+ ++P AT Sbjct: 518 GTAANSQSYTIMSPAVLK-------SELQSPTHPSSALPPAT 552
>COAT_FCVC6 (P27404) Capsid protein precursor (Coat protein)| Length = 668 Score = 30.0 bits (66), Expect = 5.3 Identities = 22/65 (33%), Positives = 34/65 (52%) Frame = -3 Query: 418 EAMGSSRNRTVRVGGVPELRTEPINQAL*HIMN*CKLAL*I*SLSIWNHAVLKLRSRTY* 239 EA+G+ R+R VR+ +PE N + H N KL I S+ ++N +L SR Sbjct: 538 EAIGADRDRVVRISVLPERGARGGNHPIFH-KNSIKLGYVIRSIDVFNSQILH-TSRQLS 595 Query: 238 VSQYL 224 ++ YL Sbjct: 596 LNHYL 600
>SPG2_STRSG (P19909) Immunoglobulin G binding protein G precursor (IgG binding| protein G) Length = 593 Score = 30.0 bits (66), Expect = 5.3 Identities = 19/39 (48%), Positives = 24/39 (61%), Gaps = 3/39 (7%) Frame = +2 Query: 50 ISKEETVEYVLALIDEMLAANPKR---AALFYDKSLSGE 157 I+ +TVE V ALIDE+LAA PK + K+L GE Sbjct: 278 INNAKTVEGVKALIDEILAALPKTDTYKLILNGKTLKGE 316
>CML1_MOUSE (P97468) Chemokine receptor-like 1 (G-protein coupled receptor DEZ)| Length = 371 Score = 29.6 bits (65), Expect = 6.9 Identities = 12/33 (36%), Positives = 22/33 (66%) Frame = +2 Query: 473 VKLLIPLISPASTQQSIQLLYETCLCIWLLSFY 571 + +L+P+ S +SI+L Y TC +W+L+F+ Sbjct: 137 ISVLLPVWS--QNHRSIRLAYMTCSAVWVLAFF 167
>GPMI_ANTSP (Q06464) 2,3-bisphosphoglycerate-independent phosphoglycerate| mutase (EC 5.4.2.1) (Phosphoglyceromutase) (BPG-independent PGAM) (iPGM) Length = 510 Score = 29.6 bits (65), Expect = 6.9 Identities = 30/102 (29%), Positives = 42/102 (41%), Gaps = 3/102 (2%) Frame = +2 Query: 32 LNILRSISKEETVEYVLALIDEMLAANPKRAALFYDKSLSGEDIYDPFLR---LLLKGNW 202 L L ISK+ V L LI + PK+A LF + + DI D + G + Sbjct: 132 LKALIQISKQYKVMTCLHLITDGRDTLPKQAKLFVKEII---DIIDENYNTEICTISGRY 188 Query: 203 FVQEKSCKILTHLISARPKLQNGMVPNGEASNSKSKLTSIHD 328 + ++ C+ S K MV N NS S + SI D Sbjct: 189 YSMDRDCR-----WSRTEKAYKAMVENSCNQNSSSDILSIID 225
>COAT_FCVF4 (P27405) Capsid protein precursor (Coat protein)| Length = 668 Score = 29.6 bits (65), Expect = 6.9 Identities = 22/65 (33%), Positives = 34/65 (52%) Frame = -3 Query: 418 EAMGSSRNRTVRVGGVPELRTEPINQAL*HIMN*CKLAL*I*SLSIWNHAVLKLRSRTY* 239 EA+GS+R+R VR+ +PE N + N KL I S+ ++N +L SR Sbjct: 538 EAIGSNRDRVVRISVLPEAGARGGNHPI-FYKNSIKLGYVIRSIDVFNSQILH-TSRQLS 595 Query: 238 VSQYL 224 ++ YL Sbjct: 596 LNHYL 600
>IL6_RABIT (Q9MZR1) Interleukin-6 precursor (IL-6)| Length = 241 Score = 29.6 bits (65), Expect = 6.9 Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 14/73 (19%) Frame = +2 Query: 224 KILTHLISA-RPKLQN-------------GMVPNGEASNSKSKLTSIHDVLKGLVDWLCS 361 K + HLI RPK++N ++ N + N K T+IH +L+GL ++L Sbjct: 147 KNIQHLIKTLRPKVKNLNEEATLKPAVAVSLMENLQQKNQWLKTTTIHFILRGLTNFLEF 206 Query: 362 QLRNPTHPNCSIP 400 LR C P Sbjct: 207 TLRAVDLMECGCP 219
>O10Q1_HUMAN (Q8NGQ4) Olfactory receptor 10Q1| Length = 319 Score = 29.3 bits (64), Expect = 9.0 Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 4/56 (7%) Frame = +3 Query: 432 RRHMLEPCLFRQMV*----NCSFL*YLQPQHNSQFSSSTKLAFVYGFYPSMMQPLI 587 RR C F V C L YL+P+ ++ +++A VY F ++ PL+ Sbjct: 239 RRRAFSTCSFHLTVVLLQYGCCSLVYLRPRSSTSEDEDSQIALVYTFVTPLLNPLL 294
>M3K1_HUMAN (Q13233) Mitogen-activated protein kinase kinase kinase 1 (EC| 2.7.11.25) (MAPK/ERK kinase kinase 1) (MEK kinase 1) (MEKK 1) (Fragment) Length = 1495 Score = 29.3 bits (64), Expect = 9.0 Identities = 35/159 (22%), Positives = 65/159 (40%), Gaps = 29/159 (18%) Frame = +2 Query: 155 EDIYDPFLRL--------LLKGNWFVQEKSCKILTHLISARPKLQN-----------GMV 277 +D+ +P++++ L NW V+E + + L+H +S L N G Sbjct: 535 KDLAEPWIQVFGMELVGCLFSRNWNVREMALRRLSHDVSGALLLANGESTGNSGGSSGSS 594 Query: 278 PNGEASNSKSKLTSIHDVLKGLVDWLCSQLRNPTHPNCSIPTATHCLATLLKETYVRTLF 457 P+G A++ S+ + DV++ L +P + A L +L T +L Sbjct: 595 PSGGATSGSSQTSISGDVVEACCSVLSMVCADPVYK--VYVAALKTLRAMLVYTPCHSLA 652 Query: 458 VQADGVKLLIPLI----------SPASTQQSIQLLYETC 544 + +LL P++ + ++Q SI L E C Sbjct: 653 ERIKLQRLLQPVVDTILVKCADANSRTSQLSISTLLELC 691 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 84,738,076 Number of Sequences: 219361 Number of extensions: 1691223 Number of successful extensions: 4219 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 4073 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4210 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5196311029 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
