Clone Information

BLAST Search Result

Clone Name	bags13j06
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	GDIA_RAT (P50398) Rab GDP dissociation inhibitor alpha (Rab GDI ...	223	3e-58
2	GDIA_PONPY (Q7YQM0) Rab GDP dissociation inhibitor alpha (Rab GD...	223	3e-58
3	GDIA_PANTR (P60028) Rab GDP dissociation inhibitor alpha (Rab GD...	223	3e-58
4	GDIA_MACFA (Q8HXX7) Rab GDP dissociation inhibitor alpha (Rab GD...	223	3e-58
5	GDIA_HUMAN (P31150) Rab GDP dissociation inhibitor alpha (Rab GD...	223	3e-58
6	GDIB_HUMAN (P50395) Rab GDP dissociation inhibitor beta (Rab GDI...	223	4e-58
7	GDIB_PONPY (Q5RCE1) Rab GDP dissociation inhibitor beta (Rab GDI...	221	9e-58
8	GDIA_MOUSE (P50396) Rab GDP dissociation inhibitor alpha (Rab GD...	221	1e-57
9	GDIA_CANFA (O97555) Rab GDP dissociation inhibitor alpha (Rab GD...	221	2e-57
10	GDIA_BOVIN (P21856) Rab GDP dissociation inhibitor alpha (Rab GD...	221	2e-57
11	GDIB_RAT (P50399) Rab GDP dissociation inhibitor beta (Rab GDI b...	221	2e-57
12	GDIB_PIG (Q6Q7J2) Rab GDP dissociation inhibitor beta (Rab GDI b...	221	2e-57
13	GDIB_MOUSE (Q61598) Rab GDP dissociation inhibitor beta (Rab GDI...	221	2e-57
14	GDIB_CANFA (O97556) Rab GDP dissociation inhibitor beta (Rab GDI...	219	4e-57
15	GDI1_SCHPO (Q10305) Probable secretory pathway GDP dissociation ...	218	1e-56
16	GDI1_YEAST (P39958) Rab GDP-dissociation inhibitor (Rab GDI) (Se...	216	5e-56
17	GDIB_BOVIN (P50397) Rab GDP dissociation inhibitor beta (Rab GDI...	213	3e-55
18	RAEP_YEAST (P32864) Rab proteins geranylgeranyltransferase compo...	82	2e-15
19	RABEP_DROME (Q9V8W3) Rab proteins geranylgeranyltransferase comp...	77	4e-14
20	RAEP_CANAL (O93831) Rab proteins geranylgeranyltransferase compo...	77	5e-14
21	RAE2_HUMAN (P26374) Rab proteins geranylgeranyltransferase compo...	57	4e-08
22	RAE2_MOUSE (Q9QZD5) Rab proteins geranylgeranyltransferase compo...	55	1e-07
23	RAE1_HUMAN (P24386) Rab proteins geranylgeranyltransferase compo...	54	3e-07
24	RAE1_MOUSE (Q9QXG2) Rab proteins geranylgeranyltransferase compo...	54	4e-07
25	RAE1_RAT (P37727) Rab proteins geranylgeranyltransferase compone...	53	8e-07
26	RL27A_EUPCR (P48161) 60S ribosomal protein L27a (L29)	34	0.28
27	FIXC_AZOCA (P26484) Protein fixC	33	0.48
28	AOFN_ASPNG (P46882) Monoamine oxidase N (EC 1.4.3.4) (MAO-N)	33	0.48
29	3O1D_COMTE (Q06401) 3-oxosteroid 1-dehydrogenase (EC 1.3.99.4)	33	0.48
30	CRTS2_ONCHC (Q52QW2) Carotenoid isomerase 2, chloroplast precurs...	33	0.48
31	CRTS1_ONCHC (Q52QW3) Carotenoid isomerase 1, chloroplast precurs...	33	0.48
32	CRTSO_DAUCA (Q2VEX9) Carotenoid isomerase, chloroplast precursor...	32	1.1
33	FIXC_RHIME (P09820) Protein fixC	32	1.4
34	GLF_MYCPN (P75499) UDP-galactopyranose mutase (EC 5.4.99.9)	32	1.4
35	FIXC_RHISN (Q53208) Protein fixC	32	1.8
36	FIXC_BRAJA (P10331) Protein fixC	32	1.8
37	GLF_MYCGE (Q49398) UDP-galactopyranose mutase (EC 5.4.99.9)	32	1.8
38	ALOX_CANBO (Q00922) Alcohol oxidase (EC 1.1.3.13) (AOX) (Methano...	31	3.1
39	CRTSO_LYCES (Q8S4R4) Carotenoid isomerase, chloroplast precursor...	31	3.1
40	RETST_BRARE (Q5BLE8) Putative all-trans-retinol 13,14-reductase ...	30	4.0
41	ERG1_SCHPO (Q9C1W3) Probable squalene monooxygenase (EC 1.14.99....	30	4.0
42	FIXC_AZOVI (P53572) Protein fixC	30	5.3
43	GPDM_RAT (P35571) Glycerol-3-phosphate dehydrogenase, mitochondr...	30	6.9
44	ATL2C_ARATH (Q9ZV53) Putative RING-H2 finger protein ATL2C	30	6.9
45	IAPL_ASFM2 (O11453) IAP-like protein p27	29	9.0
46	CRTI_PHYBL (P54982) Phytoene dehydrogenase (EC 1.14.99.-) (Phyto...	29	9.0
47	HELX_SULSO (P95949) Putative ATP-dependent helicase SSO0112 (EC ...	29	9.0

>GDIA_RAT (P50398) Rab GDP dissociation inhibitor alpha (Rab GDI alpha)|
           (Guanosine diphosphate dissociation inhibitor 1) (GDI-1)
          Length = 447

 Score =  223 bits (568), Expect = 3e-58
 Identities = 104/182 (57%), Positives = 143/182 (78%), Gaps = 1/182 (0%)
 Frame = +3

Query: 51  EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLN-LNQLWKKFRGEDKP 227
           EEYDVIVLGTGL ECILSG++SV+G KVLHMDRN YYGG+S+S+  L +L+K+F+  + P
Sbjct: 3   EEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLEGP 62

Query: 228 PAHLGSSKDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFKAVDGSFVFSKGKIHKVPAT 407
           P  +G  +D+NVD++PKF+MANG LV+ L++T+VT+YL FK V+GSFV+  GKI+KVP+T
Sbjct: 63  PESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIYKVPST 122

Query: 408 DMEAVKSPLMGLFEKRRARNFFIYVQNYDEADPKTHQGLDLTTLTTKELIAKHGLSDDTV 587
           + EA+ S LMG+FEKRR R F ++V N+DE DPKT +G+D  T + +++  K  L  D +
Sbjct: 123 ETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGVDPQTTSMRDVYRKFDLGQDVI 182

Query: 588 DF 593
           DF
Sbjct: 183 DF 184

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>GDIA_PONPY (Q7YQM0) Rab GDP dissociation inhibitor alpha (Rab GDI alpha)|
           (Guanosine diphosphate dissociation inhibitor 1) (GDI-1)
          Length = 447

 Score =  223 bits (568), Expect = 3e-58
 Identities = 104/182 (57%), Positives = 143/182 (78%), Gaps = 1/182 (0%)
 Frame = +3

Query: 51  EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLN-LNQLWKKFRGEDKP 227
           EEYDVIVLGTGL ECILSG++SV+G KVLHMDRN YYGG+S+S+  L +L+K+F+  + P
Sbjct: 3   EEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLEGP 62

Query: 228 PAHLGSSKDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFKAVDGSFVFSKGKIHKVPAT 407
           P  +G  +D+NVD++PKF+MANG LV+ L++T+VT+YL FK V+GSFV+  GKI+KVP+T
Sbjct: 63  PESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIYKVPST 122

Query: 408 DMEAVKSPLMGLFEKRRARNFFIYVQNYDEADPKTHQGLDLTTLTTKELIAKHGLSDDTV 587
           + EA+ S LMG+FEKRR R F ++V N+DE DPKT +G+D  T + +++  K  L  D +
Sbjct: 123 ETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGVDPQTTSMRDVYRKFDLGQDVI 182

Query: 588 DF 593
           DF
Sbjct: 183 DF 184

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>GDIA_PANTR (P60028) Rab GDP dissociation inhibitor alpha (Rab GDI alpha)|
           (Guanosine diphosphate dissociation inhibitor 1) (GDI-1)
          Length = 447

 Score =  223 bits (568), Expect = 3e-58
 Identities = 104/182 (57%), Positives = 143/182 (78%), Gaps = 1/182 (0%)
 Frame = +3

Query: 51  EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLN-LNQLWKKFRGEDKP 227
           EEYDVIVLGTGL ECILSG++SV+G KVLHMDRN YYGG+S+S+  L +L+K+F+  + P
Sbjct: 3   EEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLEGP 62

Query: 228 PAHLGSSKDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFKAVDGSFVFSKGKIHKVPAT 407
           P  +G  +D+NVD++PKF+MANG LV+ L++T+VT+YL FK V+GSFV+  GKI+KVP+T
Sbjct: 63  PESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIYKVPST 122

Query: 408 DMEAVKSPLMGLFEKRRARNFFIYVQNYDEADPKTHQGLDLTTLTTKELIAKHGLSDDTV 587
           + EA+ S LMG+FEKRR R F ++V N+DE DPKT +G+D  T + +++  K  L  D +
Sbjct: 123 ETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGVDPQTTSMRDVYRKFDLGQDVI 182

Query: 588 DF 593
           DF
Sbjct: 183 DF 184

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>GDIA_MACFA (Q8HXX7) Rab GDP dissociation inhibitor alpha (Rab GDI alpha)|
           (Guanosine diphosphate dissociation inhibitor 1) (GDI-1)
          Length = 447

 Score =  223 bits (568), Expect = 3e-58
 Identities = 104/182 (57%), Positives = 143/182 (78%), Gaps = 1/182 (0%)
 Frame = +3

Query: 51  EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLN-LNQLWKKFRGEDKP 227
           EEYDVIVLGTGL ECILSG++SV+G KVLHMDRN YYGG+S+S+  L +L+K+F+  + P
Sbjct: 3   EEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLEGP 62

Query: 228 PAHLGSSKDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFKAVDGSFVFSKGKIHKVPAT 407
           P  +G  +D+NVD++PKF+MANG LV+ L++T+VT+YL FK V+GSFV+  GKI+KVP+T
Sbjct: 63  PESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIYKVPST 122

Query: 408 DMEAVKSPLMGLFEKRRARNFFIYVQNYDEADPKTHQGLDLTTLTTKELIAKHGLSDDTV 587
           + EA+ S LMG+FEKRR R F ++V N+DE DPKT +G+D  T + +++  K  L  D +
Sbjct: 123 ETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGVDPQTTSMRDVYRKFDLGQDVI 182

Query: 588 DF 593
           DF
Sbjct: 183 DF 184

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>GDIA_HUMAN (P31150) Rab GDP dissociation inhibitor alpha (Rab GDI alpha)|
           (Guanosine diphosphate dissociation inhibitor 1) (GDI-1)
           (XAP-4) (Oligophrenin-2)
          Length = 447

 Score =  223 bits (568), Expect = 3e-58
 Identities = 104/182 (57%), Positives = 143/182 (78%), Gaps = 1/182 (0%)
 Frame = +3

Query: 51  EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLN-LNQLWKKFRGEDKP 227
           EEYDVIVLGTGL ECILSG++SV+G KVLHMDRN YYGG+S+S+  L +L+K+F+  + P
Sbjct: 3   EEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLEGP 62

Query: 228 PAHLGSSKDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFKAVDGSFVFSKGKIHKVPAT 407
           P  +G  +D+NVD++PKF+MANG LV+ L++T+VT+YL FK V+GSFV+  GKI+KVP+T
Sbjct: 63  PESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIYKVPST 122

Query: 408 DMEAVKSPLMGLFEKRRARNFFIYVQNYDEADPKTHQGLDLTTLTTKELIAKHGLSDDTV 587
           + EA+ S LMG+FEKRR R F ++V N+DE DPKT +G+D  T + +++  K  L  D +
Sbjct: 123 ETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGVDPQTTSMRDVYRKFDLGQDVI 182

Query: 588 DF 593
           DF
Sbjct: 183 DF 184

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>GDIB_HUMAN (P50395) Rab GDP dissociation inhibitor beta (Rab GDI beta)|
           (Guanosine diphosphate dissociation inhibitor 2) (GDI-2)
          Length = 445

 Score =  223 bits (567), Expect = 4e-58
 Identities = 104/182 (57%), Positives = 138/182 (75%), Gaps = 1/182 (0%)
 Frame = +3

Query: 51  EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLN-LNQLWKKFRGEDKP 227
           EEYDVIVLGTGL ECILSG++SV+G KVLHMDRN YYGG+S S+  L  L+K+F+    P
Sbjct: 3   EEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESASITPLEDLYKRFKIPGSP 62

Query: 228 PAHLGSSKDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFKAVDGSFVFSKGKIHKVPAT 407
           P  +G  +D+NVD++PKF+MANG LV+ L++T+VT+YL FK  +GSFV+  GKI+KVP+T
Sbjct: 63  PESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVTEGSFVYKGGKIYKVPST 122

Query: 408 DMEAVKSPLMGLFEKRRARNFFIYVQNYDEADPKTHQGLDLTTLTTKELIAKHGLSDDTV 587
           + EA+ S LMGLFEKRR R F +YV N+DE DP+T +G+D    T +++  K  L  D +
Sbjct: 123 EAEALASSLMGLFEKRRFRKFLVYVANFDEKDPRTFEGIDPKKTTMRDVYKKFDLGQDVI 182

Query: 588 DF 593
           DF
Sbjct: 183 DF 184

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>GDIB_PONPY (Q5RCE1) Rab GDP dissociation inhibitor beta (Rab GDI beta)|
           (Guanosine diphosphate dissociation inhibitor 2) (GDI-2)
          Length = 445

 Score =  221 bits (564), Expect = 9e-58
 Identities = 103/182 (56%), Positives = 138/182 (75%), Gaps = 1/182 (0%)
 Frame = +3

Query: 51  EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLN-LNQLWKKFRGEDKP 227
           EEYDVIVLGTGL ECILSG++SV+G KVLHMDRN YYGG+S S+  L  L+K+++    P
Sbjct: 3   EEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESASITPLEDLYKRYKIPGSP 62

Query: 228 PAHLGSSKDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFKAVDGSFVFSKGKIHKVPAT 407
           P  +G  +D+NVD++PKF+MANG LV+ L++T+VT+YL FK  +GSFV+  GKI+KVP+T
Sbjct: 63  PESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVTEGSFVYKGGKIYKVPST 122

Query: 408 DMEAVKSPLMGLFEKRRARNFFIYVQNYDEADPKTHQGLDLTTLTTKELIAKHGLSDDTV 587
           + EA+ S LMGLFEKRR R F +YV N+DE DP+T +G+D    T +++  K  L  D +
Sbjct: 123 EAEALASSLMGLFEKRRFRKFLVYVANFDEKDPRTFEGIDPKKTTMRDVYKKFDLGQDVI 182

Query: 588 DF 593
           DF
Sbjct: 183 DF 184

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>GDIA_MOUSE (P50396) Rab GDP dissociation inhibitor alpha (Rab GDI alpha)|
           (Guanosine diphosphate dissociation inhibitor 1) (GDI-1)
          Length = 447

 Score =  221 bits (563), Expect = 1e-57
 Identities = 103/182 (56%), Positives = 142/182 (78%), Gaps = 1/182 (0%)
 Frame = +3

Query: 51  EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLN-LNQLWKKFRGEDKP 227
           EEYDVIVLGTGL ECILSG++SV+G KVLHMDRN YYGG+S+S+  L +L+K+F+  + P
Sbjct: 3   EEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQILEGP 62

Query: 228 PAHLGSSKDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFKAVDGSFVFSKGKIHKVPAT 407
           P  +G  +D+NVD++PKF+MANG LV+ L++T+VT+YL FK V+GSFV+  GKI+KVP+T
Sbjct: 63  PESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIYKVPST 122

Query: 408 DMEAVKSPLMGLFEKRRARNFFIYVQNYDEADPKTHQGLDLTTLTTKELIAKHGLSDDTV 587
           + EA+ S LMG+FEKRR R F ++V N+DE DPKT +G+D    + +++  K  L  D +
Sbjct: 123 ETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGVDPQNTSMRDVYRKFDLGQDVI 182

Query: 588 DF 593
           DF
Sbjct: 183 DF 184

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>GDIA_CANFA (O97555) Rab GDP dissociation inhibitor alpha (Rab GDI alpha)|
           (Guanosine diphosphate dissociation inhibitor 1) (GDI-1)
          Length = 447

 Score =  221 bits (562), Expect = 2e-57
 Identities = 102/182 (56%), Positives = 143/182 (78%), Gaps = 1/182 (0%)
 Frame = +3

Query: 51  EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLN-LNQLWKKFRGEDKP 227
           EEYDVIVLGTGL ECILSG++SV+G KVLHMDRN YYGG+S+S+  L +L+K+F+  + P
Sbjct: 3   EEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLEGP 62

Query: 228 PAHLGSSKDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFKAVDGSFVFSKGKIHKVPAT 407
           P  +G  +D+NVD++PKF+MANG LV+ L++T+VT+YL FK V+GSF++  GKI+KVP+T
Sbjct: 63  PEAMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFIYKGGKIYKVPST 122

Query: 408 DMEAVKSPLMGLFEKRRARNFFIYVQNYDEADPKTHQGLDLTTLTTKELIAKHGLSDDTV 587
           + EA+ S LMG+FEKRR R F ++V N+DE DPKT +G+D  + + +++  K  L  D +
Sbjct: 123 ETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGVDPQSTSMRDVYRKFDLGQDVI 182

Query: 588 DF 593
           DF
Sbjct: 183 DF 184

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>GDIA_BOVIN (P21856) Rab GDP dissociation inhibitor alpha (Rab GDI alpha)|
           (Guanosine diphosphate dissociation inhibitor 1) (GDI-1)
           (SMG p25A GDI)
          Length = 447

 Score =  221 bits (562), Expect = 2e-57
 Identities = 103/182 (56%), Positives = 142/182 (78%), Gaps = 1/182 (0%)
 Frame = +3

Query: 51  EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLN-LNQLWKKFRGEDKP 227
           EEYDVIVLGTGL ECILSG++SV+G KVLHMDRN YYGG+S+S+  L +L+K+F+  + P
Sbjct: 3   EEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLEGP 62

Query: 228 PAHLGSSKDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFKAVDGSFVFSKGKIHKVPAT 407
           P  +G  +D+NVD++PKF+MANG LV+ L++T+VT+YL FK V+GSFV+  GKI+KVP+T
Sbjct: 63  PETMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIYKVPST 122

Query: 408 DMEAVKSPLMGLFEKRRARNFFIYVQNYDEADPKTHQGLDLTTLTTKELIAKHGLSDDTV 587
           + EA+ S LMG+FEKRR R F ++V N+DE DPKT +G+D    + +++  K  L  D +
Sbjct: 123 ETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGVDPQNTSMRDVYRKFDLGQDVI 182

Query: 588 DF 593
           DF
Sbjct: 183 DF 184

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>GDIB_RAT (P50399) Rab GDP dissociation inhibitor beta (Rab GDI beta)|
           (Guanosine diphosphate dissociation inhibitor 2) (GDI-2)
           (GDI-3)
          Length = 445

 Score =  221 bits (562), Expect = 2e-57
 Identities = 102/182 (56%), Positives = 140/182 (76%), Gaps = 1/182 (0%)
 Frame = +3

Query: 51  EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLN-LNQLWKKFRGEDKP 227
           EEYDVIVLGTGL ECILSG++SV+G KVLHMD+N YYGG+S S+  L  L+K+F+   +P
Sbjct: 3   EEYDVIVLGTGLTECILSGIMSVNGKKVLHMDQNPYYGGESASITPLEDLYKRFKLPGQP 62

Query: 228 PAHLGSSKDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFKAVDGSFVFSKGKIHKVPAT 407
           PA +G  +D+NVD++PKF+MANG LV+ L+ T+VT+Y+ FK ++GSFV+  GKI+KVP+T
Sbjct: 63  PASMGRGRDWNVDLIPKFLMANGQLVKMLLFTEVTRYMDFKVIEGSFVYKGGKIYKVPST 122

Query: 408 DMEAVKSPLMGLFEKRRARNFFIYVQNYDEADPKTHQGLDLTTLTTKELIAKHGLSDDTV 587
           + EA+ S LMGLFEKRR R F +YV N+DE DP+T +G+D    + +++  K  L  D +
Sbjct: 123 EAEALASSLMGLFEKRRFRKFLVYVANFDEKDPRTFEGVDPKKTSMRDVYKKFDLGQDVI 182

Query: 588 DF 593
           DF
Sbjct: 183 DF 184

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>GDIB_PIG (Q6Q7J2) Rab GDP dissociation inhibitor beta (Rab GDI beta)|
           (Guanosine diphosphate dissociation inhibitor 2) (GDI-2)
          Length = 445

 Score =  221 bits (562), Expect = 2e-57
 Identities = 105/182 (57%), Positives = 136/182 (74%), Gaps = 1/182 (0%)
 Frame = +3

Query: 51  EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLN-LNQLWKKFRGEDKP 227
           EEYDVIVLGTGL ECILSG++SV+G KVLHMDRN YYGG+S S+  L  L+K+F     P
Sbjct: 3   EEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESASITPLEDLYKRFNIPGAP 62

Query: 228 PAHLGSSKDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFKAVDGSFVFSKGKIHKVPAT 407
           PA +G  +D+NVD++PKF+MANG LV+ L+ T+VT+YL FK  +GSFV+  GKI+KVP+T
Sbjct: 63  PASMGRGRDWNVDLIPKFLMANGQLVKMLLFTEVTRYLDFKVTEGSFVYKGGKIYKVPST 122

Query: 408 DMEAVKSPLMGLFEKRRARNFFIYVQNYDEADPKTHQGLDLTTLTTKELIAKHGLSDDTV 587
           + EA+ S LMGLFEKRR R F +YV N+DE DP+T +G+D      +E+  K  L  D +
Sbjct: 123 EAEALASSLMGLFEKRRFRKFLVYVANFDENDPRTFEGVDPKKTAMREVYKKFDLGQDVI 182

Query: 588 DF 593
           DF
Sbjct: 183 DF 184

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>GDIB_MOUSE (Q61598) Rab GDP dissociation inhibitor beta (Rab GDI beta)|
           (Guanosine diphosphate dissociation inhibitor 2) (GDI-2)
           (GDI-3)
          Length = 445

 Score =  221 bits (562), Expect = 2e-57
 Identities = 102/182 (56%), Positives = 140/182 (76%), Gaps = 1/182 (0%)
 Frame = +3

Query: 51  EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLN-LNQLWKKFRGEDKP 227
           EEYDVIVLGTGL ECILSG++SV+G KVLHMD+N YYGG+S S+  L  L+K+F+   +P
Sbjct: 3   EEYDVIVLGTGLTECILSGIMSVNGKKVLHMDQNPYYGGESASITPLEDLYKRFKLPGQP 62

Query: 228 PAHLGSSKDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFKAVDGSFVFSKGKIHKVPAT 407
           PA +G  +D+NVD++PKF+MANG LV+ L+ T+VT+Y+ FK ++GSFV+  GKI+KVP+T
Sbjct: 63  PASMGRGRDWNVDLIPKFLMANGQLVKMLLFTEVTRYMDFKVIEGSFVYKGGKIYKVPST 122

Query: 408 DMEAVKSPLMGLFEKRRARNFFIYVQNYDEADPKTHQGLDLTTLTTKELIAKHGLSDDTV 587
           + EA+ S LMGLFEKRR R F +YV N+DE DP+T +G+D    + +++  K  L  D +
Sbjct: 123 EAEALASSLMGLFEKRRFRKFLVYVANFDEKDPRTFEGVDPKKTSMRDVYKKFDLGQDVI 182

Query: 588 DF 593
           DF
Sbjct: 183 DF 184

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>GDIB_CANFA (O97556) Rab GDP dissociation inhibitor beta (Rab GDI beta)|
           (Guanosine diphosphate dissociation inhibitor 2) (GDI-2)
          Length = 445

 Score =  219 bits (559), Expect = 4e-57
 Identities = 103/182 (56%), Positives = 137/182 (75%), Gaps = 1/182 (0%)
 Frame = +3

Query: 51  EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLN-LNQLWKKFRGEDKP 227
           EEYDVIVLGTGL ECILSG+++V+G KVLHMDRN YYGG+S S+  L  L+K+F+    P
Sbjct: 3   EEYDVIVLGTGLTECILSGIMTVNGKKVLHMDRNPYYGGESASITPLEDLYKRFKIPGAP 62

Query: 228 PAHLGSSKDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFKAVDGSFVFSKGKIHKVPAT 407
           PA +G  +D+N+D++PKF+MANG LV+ L++T+VT+YL FK  +GSFV+  GKI+KVP+T
Sbjct: 63  PASMGRGRDWNLDLIPKFLMANGQLVKMLLYTEVTRYLDFKVTEGSFVYKGGKIYKVPST 122

Query: 408 DMEAVKSPLMGLFEKRRARNFFIYVQNYDEADPKTHQGLDLTTLTTKELIAKHGLSDDTV 587
           + EA+ S LMGLFEKRR R F +YV N+DE DP+T +G+D       E+  K  L  D +
Sbjct: 123 EAEALASSLMGLFEKRRFRKFLVYVANFDEKDPRTFEGIDPKKTAIGEVYKKFDLGQDVI 182

Query: 588 DF 593
           DF
Sbjct: 183 DF 184

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>GDI1_SCHPO (Q10305) Probable secretory pathway GDP dissociation inhibitor 1|
          Length = 440

 Score =  218 bits (554), Expect = 1e-56
 Identities = 106/182 (58%), Positives = 134/182 (73%)
 Frame = +3

Query: 51  EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLNLNQLWKKFRGEDKPP 230
           EEYDVIVLGTGL EC+LSGLLSVDG KVLH+DRNDYYG DS SLNL QL+  FR  ++ P
Sbjct: 3   EEYDVIVLGTGLTECVLSGLLSVDGKKVLHIDRNDYYGADSASLNLTQLYALFRPGEQRP 62

Query: 231 AHLGSSKDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFKAVDGSFVFSKGKIHKVPATD 410
             LG  +D+ VD+VPKF+MANG L   LI+TDVT+Y+ FK + GS+V+  G+I KVP  +
Sbjct: 63  ESLGRDRDWCVDLVPKFLMANGDLTNILIYTDVTRYIEFKQIAGSYVYRDGRIAKVPGNE 122

Query: 411 MEAVKSPLMGLFEKRRARNFFIYVQNYDEADPKTHQGLDLTTLTTKELIAKHGLSDDTVD 590
           MEA+KSPLM LFEKRRA+ F  +V NY E DP T++ +++   + + +  K GL   T D
Sbjct: 123 MEALKSPLMSLFEKRRAKKFLEWVNNYREDDPSTYKDINIDRDSMESVFKKFGLQSGTQD 182

Query: 591 FI 596
           FI
Sbjct: 183 FI 184

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>GDI1_YEAST (P39958) Rab GDP-dissociation inhibitor (Rab GDI) (Secretory|
           pathway GDP dissociation inhibitor)
          Length = 451

 Score =  216 bits (549), Expect = 5e-56
 Identities = 102/185 (55%), Positives = 139/185 (75%), Gaps = 4/185 (2%)
 Frame = +3

Query: 54  EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLNLNQLWKKFR----GED 221
           +YDVIVLGTG+ ECILSGLLSVDG KVLH+D+ D+YGG++ S+ L+QL++KF+     ++
Sbjct: 9   DYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGEAASVTLSQLYEKFKQNPISKE 68

Query: 222 KPPAHLGSSKDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFKAVDGSFVFSKGKIHKVP 401
           +  +  G  +D+NVD++PKF+MANG L   LIHTDVT+Y+ FK V GS+VF +GKI+KVP
Sbjct: 69  ERESKFGKDRDWNVDLIPKFLMANGELTNILIHTDVTRYVDFKQVSGSYVFKQGKIYKVP 128

Query: 402 ATDMEAVKSPLMGLFEKRRARNFFIYVQNYDEADPKTHQGLDLTTLTTKELIAKHGLSDD 581
           A ++EA+ SPLMG+FEKRR + F  ++ +Y E D  THQGLDL   T  E+  K GL + 
Sbjct: 129 ANEIEAISSPLMGIFEKRRMKKFLEWISSYKEDDLSTHQGLDLDKNTMDEVYYKFGLGNS 188

Query: 582 TVDFI 596
           T +FI
Sbjct: 189 TKEFI 193

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>GDIB_BOVIN (P50397) Rab GDP dissociation inhibitor beta (Rab GDI beta)|
           (Guanosine diphosphate dissociation inhibitor 2) (GDI-2)
          Length = 445

 Score =  213 bits (543), Expect = 3e-55
 Identities = 102/182 (56%), Positives = 135/182 (74%), Gaps = 1/182 (0%)
 Frame = +3

Query: 51  EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLN-LNQLWKKFRGEDKP 227
           EEYDVIVLG    ECILSG++SV+G KVLHMDRN YYGG+S S+  L  L+K+F+    P
Sbjct: 3   EEYDVIVLGHTGTECILSGIMSVNGKKVLHMDRNPYYGGESASITPLEDLYKRFKIPGAP 62

Query: 228 PAHLGSSKDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFKAVDGSFVFSKGKIHKVPAT 407
           PA +G  +D+NVD++PKF+MANG LV+ L+ T+VT+YL FK  +GSFV+  GKI+KVP+T
Sbjct: 63  PASMGRGRDWNVDLIPKFLMANGQLVKMLLFTEVTRYLDFKVTEGSFVYKGGKIYKVPST 122

Query: 408 DMEAVKSPLMGLFEKRRARNFFIYVQNYDEADPKTHQGLDLTTLTTKELIAKHGLSDDTV 587
           + EA+ S LMGLFEKRR R F +YV N+DE DP+T +G+D    + +E+  K  L  D +
Sbjct: 123 EAEALASSLMGLFEKRRFRKFLVYVANFDENDPRTFEGIDPKKTSMREVYKKFDLGQDVI 182

Query: 588 DF 593
           DF
Sbjct: 183 DF 184

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>RAEP_YEAST (P32864) Rab proteins geranylgeranyltransferase component A (Rab|
           escort protein) (REP)
          Length = 603

 Score = 81.6 bits (200), Expect = 2e-15
 Identities = 50/174 (28%), Positives = 82/174 (47%), Gaps = 16/174 (9%)
 Frame = +3

Query: 21  DKLAAPPPWXEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLNLNQL- 197
           D L A  P  ++ DV++ GTG+ E +L+  L+  G  VLH+D+NDYYG  S +L ++Q+ 
Sbjct: 37  DPLPATTP--DKVDVLIAGTGMVESVLAAALAWQGSNVLHIDKNDYYGDTSATLTVDQIK 94

Query: 198 -WKKFRGEDKPPAHLG--------------SSKDYNVDMVPKFMMANGTLVRTLIHTDVT 332
            W     E     +                SS+D+ +D+ PK + A   L+  LI + V 
Sbjct: 95  RWVNEVNEGSVSCYKNAKLYVSTLIGSGKYSSRDFGIDLSPKILFAKSDLLSILIKSRVH 154

Query: 333 KYLSFKAVDGSFVFSKGKIHKVPATDMEAVKSPLMGLFEKRRARNFFIYVQNYD 494
           +YL F+++     +      K+  T  E      + L  KR    F  +V N++
Sbjct: 155 QYLEFQSLSNFHTYENDCFEKLTNTKQEIFTDQNLPLMTKRNLMKFIKFVLNWE 208

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>RABEP_DROME (Q9V8W3) Rab proteins geranylgeranyltransferase component A (Rab|
           escort protein homolog) (REP)
          Length = 511

 Score = 77.0 bits (188), Expect = 4e-14
 Identities = 47/176 (26%), Positives = 82/176 (46%), Gaps = 27/176 (15%)
 Frame = +3

Query: 51  EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLNLNQL----------- 197
           E++D++V+GTG  E  ++   S  G  VLH+D N+YYG   +S +++ L           
Sbjct: 7   EQFDLVVIGTGFTESCIAAAGSRIGKSVLHLDSNEYYGDVWSSFSMDALCARLDQEVEPH 66

Query: 198 ---------WKKFRGEDKPPAH-------LGSSKDYNVDMVPKFMMANGTLVRTLIHTDV 329
                    W     E +  A        L  S+ +++D+ P+ + A G LV+ LI +++
Sbjct: 67  SALRNARYTWHSMEKESETDAQSWNRDSVLAKSRRFSLDLCPRILYAAGELVQLLIKSNI 126

Query: 330 TKYLSFKAVDGSFVFSKGKIHKVPATDMEAVKSPLMGLFEKRRARNFFIYVQNYDE 497
            +Y  F+AVD   +   G+I  VP +  +   +  + + EKR    F     +Y E
Sbjct: 127 CRYAEFRAVDHVCMRHNGEIVSVPCSRSDVFNTKTLTIVEKRLLMKFLTACNDYGE 182

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>RAEP_CANAL (O93831) Rab proteins geranylgeranyltransferase component A (Rab|
           escort protein) (REP)
          Length = 640

 Score = 76.6 bits (187), Expect = 5e-14
 Identities = 51/160 (31%), Positives = 79/160 (49%), Gaps = 19/160 (11%)
 Frame = +3

Query: 60  DVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLNLNQLWKKFRGE------- 218
           DV+++GTGL+E IL+  LS  G +VLH+D N YYG   ++L + QL KK+ G+       
Sbjct: 5   DVLIIGTGLQESILAAALSWQGTQVLHIDSNTYYGDSCSTLTIEQL-KKWCGDVNSGKIH 63

Query: 219 ----------DKPPAHLGSSKDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFKAVDGSF 368
                         ++  +SKDY +D+ PK M     L+  LI + V +YL F+++    
Sbjct: 64  QFQDAQIYIPGGKQSNQYTSKDYGIDLTPKIMFCQSDLLSLLIKSRVYRYLEFQSLSNFH 123

Query: 369 VFSKGKI-HKVPATDMEAV-KSPLMGLFEKRRARNFFIYV 482
           VF       KV AT  + +     + L  KR    F  ++
Sbjct: 124 VFENDDFQQKVNATTKQDIFTDKSLSLMTKRYLMKFLKFL 163

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>RAE2_HUMAN (P26374) Rab proteins geranylgeranyltransferase component A 2 (Rab|
           escort protein 2) (REP-2) (Choroideraemia-like protein)
          Length = 656

 Score = 57.0 bits (136), Expect = 4e-08
 Identities = 25/81 (30%), Positives = 45/81 (55%)
 Frame = +3

Query: 255 YNVDMVPKFMMANGTLVRTLIHTDVTKYLSFKAVDGSFVFSKGKIHKVPATDMEAVKSPL 434
           +N+D+V K + + G L+  LI +DV++Y+ FK V     F +GK+ +VP +  +   S  
Sbjct: 229 FNIDLVSKLLYSQGLLIDLLIKSDVSRYVEFKNVTRILAFREGKVEQVPCSRADVFNSKE 288

Query: 435 MGLFEKRRARNFFIYVQNYDE 497
           + + EKR    F  +   Y++
Sbjct: 289 LTMVEKRMLMKFLTFCLEYEQ 309



 Score = 50.4 bits (119), Expect = 4e-06
 Identities = 24/53 (45%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
 Frame = +3

Query: 54  EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLNLNQL--WKK 206
           E+DV+++GTGL E IL+   S  G +VLH+D   YYGG+  S + + L  W K
Sbjct: 8   EFDVVIIGTGLPESILAAACSRSGQRVLHIDSRSYYGGNWASFSFSGLLSWLK 60

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>RAE2_MOUSE (Q9QZD5) Rab proteins geranylgeranyltransferase component A 2 (Rab|
           escort protein 2) (REP-2) (Choroideraemia-like protein)
          Length = 621

 Score = 55.5 bits (132), Expect = 1e-07
 Identities = 25/84 (29%), Positives = 48/84 (57%)
 Frame = +3

Query: 246 SKDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFKAVDGSFVFSKGKIHKVPATDMEAVK 425
           S+ +N+D+V K + + G+L+  LI ++V++Y  FK V     F +GK+ +VP +  +   
Sbjct: 225 SRRFNIDLVSKPLYSQGSLIDLLIKSNVSRYAEFKNVTRILAFWEGKVEQVPCSRADVFN 284

Query: 426 SPLMGLFEKRRARNFFIYVQNYDE 497
           S  + + EKR    F  +  +Y++
Sbjct: 285 SKELSMVEKRMLMKFLTFCLDYEQ 308



 Score = 50.4 bits (119), Expect = 4e-06
 Identities = 24/53 (45%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
 Frame = +3

Query: 54  EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLNLN--QLWKK 206
           E+DV+++GTGL E IL+   S  G +VLH+D   YYGG+  S +    Q W K
Sbjct: 8   EFDVVIIGTGLPESILAAACSRSGQRVLHVDSRSYYGGNWASFSFTGLQSWLK 60

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>RAE1_HUMAN (P24386) Rab proteins geranylgeranyltransferase component A 1 (Rab|
           escort protein 1) (REP-1) (Choroideraemia protein) (TCD
           protein)
          Length = 653

 Score = 54.3 bits (129), Expect = 3e-07
 Identities = 26/94 (27%), Positives = 49/94 (52%)
 Frame = +3

Query: 255 YNVDMVPKFMMANGTLVRTLIHTDVTKYLSFKAVDGSFVFSKGKIHKVPATDMEAVKSPL 434
           +N+D+V K + + G L+  LI ++V++Y  FK +     F +G++ +VP +  +   S  
Sbjct: 227 FNIDLVSKLLYSRGLLIDLLIKSNVSRYAEFKNITRILAFREGRVEQVPCSRADVFNSKQ 286

Query: 435 MGLFEKRRARNFFIYVQNYDEADPKTHQGLDLTT 536
           + + EKR    F  +   Y E  P  ++G +  T
Sbjct: 287 LTMVEKRMLMKFLTFCMEY-EKYPDEYKGYEEIT 319



 Score = 50.4 bits (119), Expect = 4e-06
 Identities = 25/53 (47%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
 Frame = +3

Query: 54  EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLNLNQL--WKK 206
           E+DVIV+GTGL E I++   S  G +VLH+D   YYGG+  S + + L  W K
Sbjct: 8   EFDVIVIGTGLPESIIAAACSRSGRRVLHVDSRSYYGGNWASFSFSGLLSWLK 60

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>RAE1_MOUSE (Q9QXG2) Rab proteins geranylgeranyltransferase component A 1 (Rab|
           escort protein 1) (REP-1) (Choroideraemia protein
           homolog)
          Length = 665

 Score = 53.5 bits (127), Expect = 4e-07
 Identities = 25/96 (26%), Positives = 50/96 (52%)
 Frame = +3

Query: 255 YNVDMVPKFMMANGTLVRTLIHTDVTKYLSFKAVDGSFVFSKGKIHKVPATDMEAVKSPL 434
           +N+D+V K + + G L+  LI ++V++Y  FK +     F +G + +VP +  +   S  
Sbjct: 239 FNIDLVSKLLYSRGLLIDLLIKSNVSRYAEFKNITRILAFREGTVEQVPCSRADVFNSKQ 298

Query: 435 MGLFEKRRARNFFIYVQNYDEADPKTHQGLDLTTLT 542
           + + EKR    F  +   Y++  P  ++  + TT +
Sbjct: 299 LTMVEKRMLMKFLTFCVEYED-HPDEYKAYEETTFS 333



 Score = 50.4 bits (119), Expect = 4e-06
 Identities = 44/140 (31%), Positives = 60/140 (42%), Gaps = 18/140 (12%)
 Frame = +3

Query: 54  EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLNLNQL--WKKFRGE--- 218
           ++DVIV+GTGL E I++   S  G +VLH+D   YYGG+  S + + L  W K   E   
Sbjct: 8   DFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNWASFSFSGLLSWLKEYQENSD 67

Query: 219 -------------DKPPAHLGSSKDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFKAVD 359
                        +   A L SSKD  +  V  F  A+  L     H DV +        
Sbjct: 68  VVTENSMWQEQILENEEAILLSSKDKTIQHVEVFCYASQDL-----HKDVEE-------- 114

Query: 360 GSFVFSKGKIHKVPATDMEA 419
                  G + K PA+ M A
Sbjct: 115 ------AGALQKNPASVMSA 128

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>RAE1_RAT (P37727) Rab proteins geranylgeranyltransferase component A 1 (Rab|
           escort protein 1) (REP-1) (Choroideraemia protein
           homolog)
          Length = 650

 Score = 52.8 bits (125), Expect = 8e-07
 Identities = 25/96 (26%), Positives = 50/96 (52%)
 Frame = +3

Query: 255 YNVDMVPKFMMANGTLVRTLIHTDVTKYLSFKAVDGSFVFSKGKIHKVPATDMEAVKSPL 434
           +N+D+V + + + G L+  LI ++V++Y  FK +     F +G + +VP +  +   S  
Sbjct: 224 FNIDLVSQLLYSRGLLIDLLIKSNVSRYAEFKNITRILAFREGTVEQVPCSRADVFNSKQ 283

Query: 435 MGLFEKRRARNFFIYVQNYDEADPKTHQGLDLTTLT 542
           + + EKR    F  +   Y+E  P  ++  + TT +
Sbjct: 284 LTMVEKRMLMKFLTFCVEYEE-HPDEYRAYEGTTFS 318



 Score = 49.7 bits (117), Expect = 6e-06
 Identities = 36/111 (32%), Positives = 52/111 (46%), Gaps = 19/111 (17%)
 Frame = +3

Query: 54  EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLNL--------------- 188
           ++DVIV+GTGL E I++   S  G +VLH+D   YYGG+  S +                
Sbjct: 8   DFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNWASFSFSGLLSWLKEYQENND 67

Query: 189 ----NQLWKKFRGEDKPPAHLGSSKDYNVDMVPKFMMANGTLVRTLIHTDV 329
               N +W++   E++    L SSKD  +  V  F  A+  L     H DV
Sbjct: 68  VVTENSMWQEQILENEEAIPL-SSKDKTIQHVEVFCYASQDL-----HKDV 112

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>RL27A_EUPCR (P48161) 60S ribosomal protein L27a (L29)|
          Length = 148

 Score = 34.3 bits (77), Expect = 0.28
 Identities = 18/56 (32%), Positives = 29/56 (51%)
 Frame = +3

Query: 105 GLLSVDGLKVLHMDRNDYYGGDSTSLNLNQLWKKFRGEDKPPAHLGSSKDYNVDMV 272
           G +   G++  H+ RN YY     S+NL++LW     E++  A    SK   +D+V
Sbjct: 51  GHIGKHGMRHFHLMRNQYY---CPSINLSKLWSLVTEEERQKAQTDKSKVILIDVV 103

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>FIXC_AZOCA (P26484) Protein fixC|
          Length = 435

 Score = 33.5 bits (75), Expect = 0.48
 Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 6/78 (7%)
 Frame = +3

Query: 51  EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDST------SLNLNQLWKKFR 212
           E++D IV+G G+     +  L+  GLKVL ++R +Y G  +       +  L +L   FR
Sbjct: 4   EKFDAIVVGAGMAGNAATLTLARRGLKVLQLERGEYSGSKNVQGAILYADMLEKLVPDFR 63

Query: 213 GEDKPPAHLGSSKDYNVD 266
              +  AHL   + + +D
Sbjct: 64  ETRRWSAHLVEQRFWMLD 81

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>AOFN_ASPNG (P46882) Monoamine oxidase N (EC 1.4.3.4) (MAO-N)|
          Length = 495

 Score = 33.5 bits (75), Expect = 0.48
 Identities = 34/120 (28%), Positives = 49/120 (40%), Gaps = 3/120 (2%)
 Frame = +3

Query: 42  PWXEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLNLNQLWKKFRGED 221
           PW    DVIV+G G      +  L+V G K L ++  D  GG S S N+          D
Sbjct: 39  PW----DVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGGRSWSSNI----------D 84

Query: 222 KPPAHLGSSKDYNVDMVPKFMMANGTLV---RTLIHTDVTKYLSFKAVDGSFVFSKGKIH 392
             P  +G                 GT V   ++ +  ++T+Y    A+  SF FS+G  H
Sbjct: 85  GYPYEMG-----------------GTWVHWHQSHVWREITRYKMHNALSPSFNFSRGVNH 127

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>3O1D_COMTE (Q06401) 3-oxosteroid 1-dehydrogenase (EC 1.3.99.4)|
          Length = 573

 Score = 33.5 bits (75), Expect = 0.48
 Identities = 17/50 (34%), Positives = 29/50 (58%)
 Frame = +3

Query: 51  EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLNLNQLW 200
           +EYD+IV+G+G   C         GLK L +++ + +GG S +L+   +W
Sbjct: 4   QEYDLIVVGSGAGACWAPIRAQEQGLKTLVVEKTELFGGTS-ALSGGGIW 52

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>CRTS2_ONCHC (Q52QW2) Carotenoid isomerase 2, chloroplast precursor (EC 5.-.-.-)|
           (CrtISO2) (OcrtISO24)
          Length = 587

 Score = 33.5 bits (75), Expect = 0.48
 Identities = 16/41 (39%), Positives = 26/41 (63%)
 Frame = +3

Query: 51  EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDS 173
           EEYD IV+G+G+   + +  L+V G +VL +++    GG S
Sbjct: 68  EEYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSS 108

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>CRTS1_ONCHC (Q52QW3) Carotenoid isomerase 1, chloroplast precursor (EC 5.-.-.-)|
           (CrtISO1) (OcrtISO22)
          Length = 587

 Score = 33.5 bits (75), Expect = 0.48
 Identities = 16/41 (39%), Positives = 26/41 (63%)
 Frame = +3

Query: 51  EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDS 173
           EEYD IV+G+G+   + +  L+V G +VL +++    GG S
Sbjct: 68  EEYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSS 108

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>CRTSO_DAUCA (Q2VEX9) Carotenoid isomerase, chloroplast precursor (EC 5.-.-.-)|
           (CrtISO)
          Length = 615

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 16/40 (40%), Positives = 25/40 (62%)
 Frame = +3

Query: 54  EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDS 173
           EYD IV+G+G+   + +  L+V G KVL +++    GG S
Sbjct: 97  EYDAIVIGSGIGGLVAATQLAVKGAKVLVLEKYLIPGGSS 136

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>FIXC_RHIME (P09820) Protein fixC|
          Length = 435

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 14/38 (36%), Positives = 24/38 (63%)
 Frame = +3

Query: 51  EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYG 164
           E++D IV+G G+     +  ++  GLKVL ++R +Y G
Sbjct: 4   EKFDAIVVGAGMSGNAAAYAMASRGLKVLQLERGEYPG 41

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>GLF_MYCPN (P75499) UDP-galactopyranose mutase (EC 5.4.99.9)|
          Length = 399

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 14/39 (35%), Positives = 25/39 (64%)
 Frame = +3

Query: 54  EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGD 170
           ++D IVLG G+   +LS +L+  G  VL +++ +  GG+
Sbjct: 14  KFDFIVLGAGISGIVLSHVLAQHGKSVLLLEKRNQLGGN 52

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>FIXC_RHISN (Q53208) Protein fixC|
          Length = 435

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 14/38 (36%), Positives = 23/38 (60%)
 Frame = +3

Query: 51  EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYG 164
           E +D IV+G G+     +  ++  GLKVL ++R +Y G
Sbjct: 4   ERFDAIVVGAGMSGNAAAYTMASRGLKVLQLERGEYPG 41

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>FIXC_BRAJA (P10331) Protein fixC|
          Length = 435

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 6/78 (7%)
 Frame = +3

Query: 51  EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDST------SLNLNQLWKKFR 212
           E +D IV+G G+     +  ++  G+KVL ++R +Y G  +       +  + +L  +FR
Sbjct: 4   ERFDAIVVGAGMAGNAAALTMAKQGMKVLQLERGEYPGSKNVQGAILYADMMEKLIPEFR 63

Query: 213 GEDKPPAHLGSSKDYNVD 266
            E     HL   + + +D
Sbjct: 64  EEAPLERHLIEQRFWMMD 81

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>GLF_MYCGE (Q49398) UDP-galactopyranose mutase (EC 5.4.99.9)|
          Length = 404

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 10/38 (26%), Positives = 26/38 (68%)
 Frame = +3

Query: 57  YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGD 170
           +D++++G G+   +L+ +L+    +VL +++ D+ GG+
Sbjct: 21  FDILIVGAGISGIVLANILANHNKRVLIVEKRDHIGGN 58

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>ALOX_CANBO (Q00922) Alcohol oxidase (EC 1.1.3.13) (AOX) (Methanol oxidase)|
           (MOX)
          Length = 663

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
 Frame = +3

Query: 51  EEYDVIVLGTGLKECILSG-LLSVD-GLKVLHMDRNDYYGGDSTSLNLNQLW 200
           EE+DVIV G G   C+++G L +VD  LKVL ++  +         NLN  W
Sbjct: 5   EEFDVIVCGGGSTGCVIAGRLANVDENLKVLLIENGEN--------NLNNPW 48

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>CRTSO_LYCES (Q8S4R4) Carotenoid isomerase, chloroplast precursor (EC 5.-.-.-)|
           (CrtISO) (Protein tangerine)
          Length = 615

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 15/39 (38%), Positives = 24/39 (61%)
 Frame = +3

Query: 57  YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDS 173
           YD IV+G+G+   + +  L+V G KVL +++    GG S
Sbjct: 98  YDAIVIGSGIGGLVAATQLAVKGAKVLVLEKYVIPGGSS 136

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>RETST_BRARE (Q5BLE8) Putative all-trans-retinol 13,14-reductase precursor (EC|
           1.3.99.23) (All-trans-13,14-dihydroretinol saturase)
           (RetSat)
          Length = 607

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 14/39 (35%), Positives = 26/39 (66%)
 Frame = +3

Query: 51  EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGG 167
           E+ D +V+G+G+    ++ LL+  G KVL ++++D  GG
Sbjct: 61  EDLDAVVVGSGIGGLAIAVLLAKVGKKVLVLEQHDRAGG 99

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>ERG1_SCHPO (Q9C1W3) Probable squalene monooxygenase (EC 1.14.99.7) (Squalene|
           epoxidase) (SE)
          Length = 457

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = +3

Query: 51  EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRN 152
           ++ D+I++G G+  C L   L   G KVL ++R+
Sbjct: 4   QDADIIIIGAGITGCALGAALGRQGRKVLVLERD 37

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>FIXC_AZOVI (P53572) Protein fixC|
          Length = 427

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 15/38 (39%), Positives = 23/38 (60%)
 Frame = +3

Query: 51  EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYG 164
           E +DVIV+G G+     +  L+  GLKVL ++R +  G
Sbjct: 3   ERFDVIVVGAGMAGNAAAYTLAKGGLKVLQIERGETPG 40

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>GPDM_RAT (P35571) Glycerol-3-phosphate dehydrogenase, mitochondrial|
           precursor (EC 1.1.99.5) (GPD-M) (GPDH-M)
          Length = 727

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = +3

Query: 54  EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDST 176
           E+D++V+G G   C  +      GLK   ++RND+  G S+
Sbjct: 69  EFDILVIGGGATGCGCALDAVTRGLKTALVERNDFASGTSS 109

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>ATL2C_ARATH (Q9ZV53) Putative RING-H2 finger protein ATL2C|
          Length = 423

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 15/50 (30%), Positives = 24/50 (48%)
 Frame = +3

Query: 87  KECILSGLLSVDGLKVLHMDRNDYYGGDSTSLNLNQLWKKFRGEDKPPAH 236
           K  I     +VDG + L M   +Y      +L ++   KK  G+D+ P+H
Sbjct: 265 KNSISGNSKNVDGRRCLSMGSYEYIMDQEATLKVHVSTKKLSGKDRVPSH 314

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>IAPL_ASFM2 (O11453) IAP-like protein p27|
          Length = 238

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 30/115 (26%), Positives = 53/115 (46%), Gaps = 5/115 (4%)
 Frame = +3

Query: 51  EEYDVIVLGTGLKEC-ILSGLLSVDGLKVLHMDRNDYYGGDSTSLNLNQLWKKFRGEDKP 227
           E++ + V G   + C  +   L + GLK +    NDY+  + +  + N+++   R ED  
Sbjct: 89  EKHPLQVHGFWSRNCGFMRATLGIIGLKKMIDSYNDYFTNEVSVKHKNRVYTHKRLED-- 146

Query: 228 PAHLGSSKDYNVDMVPKFMMANGTL--VRTLIHTDV--TKYLSFKAVDGSFVFSK 380
              +G SK +      +F++AN  +   R  IH  +   +Y +FK V     F K
Sbjct: 147 ---MGFSKSF-----MRFILANAFMPPYRKYIHKIILNERYFTFKFVAYLLSFHK 193

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>CRTI_PHYBL (P54982) Phytoene dehydrogenase (EC 1.14.99.-) (Phytoene|
           desaturase)
          Length = 583

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 13/43 (30%), Positives = 26/43 (60%)
 Frame = +3

Query: 63  VIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLNLN 191
           VI++G G      +  L+ +G+KV  +++N++ GG  + +N N
Sbjct: 7   VIIIGAGAGGTATAARLAREGIKVTVVEKNNFGGGRCSLINHN 49

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>HELX_SULSO (P95949) Putative ATP-dependent helicase SSO0112 (EC 3.6.1.-)|
          Length = 875

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 11/34 (32%), Positives = 21/34 (61%)
 Frame = -3

Query: 494 IVILDINEEVPCSAFLKKAHQRRLHSLHISRGNL 393
           ++++D ++ V CS   K A  R++ S+HI +  L
Sbjct: 385 VIVVDRDDLVECSVLAKLARDRKIDSIHIPKNPL 418


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80,609,606
Number of Sequences: 219361
Number of extensions: 1609517
Number of successful extensions: 4339
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 4204
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4318
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5196311029
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result