ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal9j10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AL4A1_HUMAN (P30038) Delta-1-pyrroline-5-carboxylate dehydrogena... 27 9.3

>AL4A1_HUMAN (P30038) Delta-1-pyrroline-5-carboxylate dehydrogenase,|
           mitochondrial precursor (EC 1.5.1.12) (P5C
           dehydrogenase) (Aldehyde dehydrogenase 4A1)
          Length = 563

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 22/82 (26%), Positives = 34/82 (41%), Gaps = 1/82 (1%)
 Frame = +3

Query: 12  EWPEHGTKITSRAYLSYQNCDXSTGLFFTD*SIQLCSVHFQ-PKTVILRQKKLIPPS*NE 188
           +W EH     S   L+   CD S G F     ++ C V  + P+  I++++   P     
Sbjct: 402 KWLEHARSSPSLTILAGGKCDDSVGYF-----VEPCIVESKDPQEPIMKEEIFGPVLSVY 456

Query: 189 VREGQVYSEVVLLKNSXCKQGL 254
           V     Y E + L +S    GL
Sbjct: 457 VYPDDKYKETLQLVDSTTSYGL 478


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,421,885
Number of Sequences: 219361
Number of extensions: 843437
Number of successful extensions: 1655
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1642
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1655
length of database: 80,573,946
effective HSP length: 97
effective length of database: 59,295,929
effective search space used: 1423102296
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top