ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags13j01 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK070578.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023061F14, full insert sequence Length = 1367 Score = 539 bits (272), Expect = e-150 Identities = 370/400 (92%), Gaps = 2/400 (0%) Strand = Plus / Plus Query: 4 cttatcacgaag-caaggcacgatggccagaactacgtgtttgctcttcttactggttac 62 |||||||||||| |||||||| ||||||||||||| |||||||||||||||||||||||| Sbjct: 736 cttatcacgaaggcaaggcacaatggccagaactatgtgtttgctcttcttactggttac 795 Query: 63 catgacccacctgctggtgttcagattcgtgagggtctgcattacaatccctacttccct 122 | ||| |||||||| ||||||||||| ||||||||| ||||||||||||||||||||||| Sbjct: 796 cgtgatccacctgccggtgttcagatccgtgagggtttgcattacaatccctacttccct 855 Query: 123 ggtggtgccatagccatgcctaagatgcttatggatggagctattgagtatgaagatggt 182 |||||||||||||| ||||| ||||||||||| ||||||||| |||| |||||||||||| Sbjct: 856 ggtggtgccatagctatgcccaagatgcttatagatggagctgttgaatatgaagatggt 915 Query: 183 actcctgcaactgaagcccagatgggcaaggatgtcgtgtcgttcttgtcgtgggcagct 242 |||||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||| Sbjct: 916 actcctgccactgaagcccagatgggcaaggatgtcgtttcgttcttgtcatgggcagct 975 Query: 243 gagcctgaaatggaagagaggaaactgatgggtgtcaaatggatcttcctactgtcactt 302 || ||||| ||||||||||||||||||||||| || |||||||||||||||||||||||| Sbjct: 976 gaacctgagatggaagagaggaaactgatgggagtgaaatggatcttcctactgtcactt 1035 Query: 303 gctcttctccaagccgcatactaccgtcgcatgaggtggtctgtcctcaagtcccgcaag 362 || |||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||| Sbjct: 1036 gcacttctccaagccgcatactaccgtcgcatgaggtggtccgtcctgaagtcacgcaag 1095 Query: 363 ctggtcctggacgtcgtcaact-agtgaccattgtttctt 401 |||||||| || || ||||||| || ||||| |||||||| Sbjct: 1096 ctggtccttgatgttgtcaactgagggaccactgtttctt 1135 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 513 tgttttcttcctctgctgcaaaagcattt 541 ||||||||||||||||||||||||||||| Sbjct: 1234 tgttttcttcctctgctgcaaaagcattt 1262
>gb|AY090551.1| Deschampsia antarctica clone Dacor 1.1 cytochrome c1 precursor mRNA, 3' UTR and partial cds Length = 418 Score = 515 bits (260), Expect = e-143 Identities = 369/404 (91%), Gaps = 1/404 (0%) Strand = Plus / Plus Query: 159 ggagctattgagtatgaagatggtactcctgcaactgaagcccagatgggcaaggatgtc 218 |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ggagctgttgagtatgaagatggtactcctgcaactgaagcccagatgggcaaggatgtt 60 Query: 219 gtgtcgttcttgtcgtgggcagctgagcctgaaatggaagagaggaaactgatgggtgtc 278 ||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gtgtcattcttgtcatgggcggctgagcctgaaatggaagagaggaaactgatgggtgtc 120 Query: 279 aaatggatcttcctactgtcacttgctcttctccaagccgcatactaccgtcgcatgagg 338 |||||||||||||||||||||||||| ||| ||||||| ||||||||||||||||||||| Sbjct: 121 aaatggatcttcctactgtcacttgcacttatccaagctgcatactaccgtcgcatgagg 180 Query: 339 tggtctgtcctcaagtcccgcaagctggtcctggacgtcgtcaactagtgaccattgttt 398 ||||| ||||||||||||||||||||||||||||| |||||||||| |||||||||||| Sbjct: 181 tggtcggtcctcaagtcccgcaagctggtcctggatgtcgtcaactgatgaccattgttt 240 Query: 399 cttctttctattgcaacatcgagtctttaagcagaagcgatcgaaataaggactttccgt 458 ||||||| || | |||| | |||||||||||||||||| |||||||||| ||||||| || Sbjct: 241 cttctttttactacaacgttgagtctttaagcagaagctatcgaaataatgactttctgt 300 Query: 459 tgtatattttgctactctggttgtctcccatcataccttgggtacaatctcttttgtttt 518 |||| ||||||| ||| |||||||||||||||| || || || ||| |||| |||||| Sbjct: 301 tgtacattttgccactggggttgtctcccatcatcccctgcctagaatttcttctgtttt 360 Query: 519 cttcctctgctgcaaaagcatttctcttaagggagcagttattt 562 | || ||||||||||||||||||||| |||||||||||||||| Sbjct: 361 cctcttctgctgcaaaagcatttctc-caagggagcagttattt 403
>gb|BT016510.1| Zea mays clone Contig343 mRNA sequence Length = 1417 Score = 448 bits (226), Expect = e-122 Identities = 334/370 (90%) Strand = Plus / Plus Query: 15 gcaaggcacgatggccagaactacgtgtttgctcttcttactggttaccatgacccacct 74 ||||||||| |||| |||||||| || || |||||||||||||| || ||||| |||||| Sbjct: 665 gcaaggcacaatggtcagaactatgttttcgctcttcttactggatatcatgatccacct 724 Query: 75 gctggtgttcagattcgtgagggtctgcattacaatccctacttccctggtggtgccata 134 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 725 gctggtgttcagattcgtgagggtctgcactacaatccctacttccctggtggtgccata 784 Query: 135 gccatgcctaagatgcttatggatggagctattgagtatgaagatggtactcctgcaact 194 |||||||| |||||||||| ||||||||| |||||||||| |||||||| ||||||||| Sbjct: 785 gccatgccgaagatgcttaatgatggagctgttgagtatgaggatggtacacctgcaact 844 Query: 195 gaagcccagatgggcaaggatgtcgtgtcgttcttgtcgtgggcagctgagcctgaaatg 254 |||||||||||||| ||||||||||| || ||| | |||||||||||||||||||| ||| Sbjct: 845 gaagcccagatgggtaaggatgtcgtatcattcctttcgtgggcagctgagcctgagatg 904 Query: 255 gaagagaggaaactgatgggtgtcaaatggatcttcctactgtcacttgctcttctccaa 314 |||||||| || |||||||| || ||||||||||| ||||| ||||| || ||||||||| Sbjct: 905 gaagagagaaagctgatgggagtgaaatggatctttctactatcactagcgcttctccaa 964 Query: 315 gccgcatactaccgtcgcatgaggtggtctgtcctcaagtcccgcaagctggtcctggac 374 || || |||||||| |||||||||||||| ||||| |||||||| |||||||||||||| Sbjct: 965 gctgcctactaccgccgcatgaggtggtcagtcctgaagtcccgaaagctggtcctggat 1024 Query: 375 gtcgtcaact 384 |||||||||| Sbjct: 1025 gtcgtcaact 1034
>gb|AY103572.1| Zea mays PCO092029 mRNA sequence Length = 1394 Score = 408 bits (206), Expect = e-111 Identities = 329/370 (88%) Strand = Plus / Plus Query: 15 gcaaggcacgatggccagaactacgtgtttgctcttcttactggttaccatgacccacct 74 ||||||||| |||| |||||||| || || |||||||||||||| |||| ||| |||||| Sbjct: 709 gcaaggcacaatggtcagaactatgttttcgctcttcttactggataccgtgatccacct 768 Query: 75 gctggtgttcagattcgtgagggtctgcattacaatccctacttccctggtggtgccata 134 ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| Sbjct: 769 gctggtgttcagattcgtgagggtctgcactacaacccctacttccctggtggtgccata 828 Query: 135 gccatgcctaagatgcttatggatggagctattgagtatgaagatggtactcctgcaact 194 |||||||| |||||||| | ||||||||| |||||||||| |||||||||||||||||| Sbjct: 829 gccatgcccaagatgctcaatgatggagctgttgagtatgaggatggtactcctgcaact 888 Query: 195 gaagcccagatgggcaaggatgtcgtgtcgttcttgtcgtgggcagctgagcctgaaatg 254 |||||||||||||| |||||||| || || ||| | || ||||||||||||||||| ||| Sbjct: 889 gaagcccagatgggtaaggatgttgtatcattcctttcatgggcagctgagcctgagatg 948 Query: 255 gaagagaggaaactgatgggtgtcaaatggatcttcctactgtcacttgctcttctccaa 314 |||||||| || |||||||| || ||||||||||| ||||| ||||| || ||||| ||| Sbjct: 949 gaagagagaaagctgatgggagtgaaatggatctttctactatcactagcgcttcttcaa 1008 Query: 315 gccgcatactaccgtcgcatgaggtggtctgtcctcaagtcccgcaagctggtcctggac 374 || ||||||||||| |||||||||||||| ||| | |||||||| |||||||||||||| Sbjct: 1009 gctgcatactaccgccgcatgaggtggtcagtcttgaagtcccgtaagctggtcctggat 1068 Query: 375 gtcgtcaact 384 || ||||||| Sbjct: 1069 gttgtcaact 1078
>ref|NM_190059.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 915 Score = 327 bits (165), Expect = 2e-86 Identities = 306/353 (86%) Strand = Plus / Plus Query: 18 aggcacgatggccagaactacgtgtttgctcttcttactggttaccatgacccacctgct 77 |||||| ||||||||||||| || ||||||||||| |||||||| | ||| ||||||||| Sbjct: 547 aggcacaatggccagaactatgtttttgctcttctcactggttatcgtgatccacctgct 606 Query: 78 ggtgttcagattcgtgagggtctgcattacaatccctacttccctggtggtgccatagcc 137 |||||| ||||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct: 607 ggtgtttcgattcgtgaaggcttgcattacaatccctacttccctggtggtgccatagcc 666 Query: 138 atgcctaagatgcttatggatggagctattgagtatgaagatggtactcctgcaactgaa 197 ||||| ||||||||||| |||||||| | |||||||||||||| ||||| || || ||| Sbjct: 667 atgcccaagatgcttattgatggagcagtcgagtatgaagatggcactccagctacagaa 726 Query: 198 gcccagatgggcaaggatgtcgtgtcgttcttgtcgtgggcagctgagcctgaaatggaa 257 ||||||||||| || ||||| || ||||||||||| ||||| || |||||||| |||||| Sbjct: 727 gcccagatgggaaaagatgttgtctcgttcttgtcatgggcggcggagcctgagatggaa 786 Query: 258 gagaggaaactgatgggtgtcaaatggatcttcctactgtcacttgctcttctccaagcc 317 ||||| ||||||||||| || |||||||| || ||||| || || || ||||| ||||| Sbjct: 787 gagagaaaactgatgggagtgaaatggatttttctactctccctcgcacttctgcaagct 846 Query: 318 gcatactaccgtcgcatgaggtggtctgtcctcaagtcccgcaagctggtcct 370 ||||| ||||| ||||||| |||||| ||| |||||| |||||||||||||| Sbjct: 847 gcatattaccggcgcatgaagtggtccgtctacaagtcgcgcaagctggtcct 899
>dbj|AK069403.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023013M20, full insert sequence Length = 1379 Score = 327 bits (165), Expect = 2e-86 Identities = 306/353 (86%) Strand = Plus / Plus Query: 18 aggcacgatggccagaactacgtgtttgctcttcttactggttaccatgacccacctgct 77 |||||| ||||||||||||| || ||||||||||| |||||||| | ||| ||||||||| Sbjct: 695 aggcacaatggccagaactatgtttttgctcttctcactggttatcgtgatccacctgct 754 Query: 78 ggtgttcagattcgtgagggtctgcattacaatccctacttccctggtggtgccatagcc 137 |||||| ||||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct: 755 ggtgtttcgattcgtgaaggcttgcattacaatccctacttccctggtggtgccatagcc 814 Query: 138 atgcctaagatgcttatggatggagctattgagtatgaagatggtactcctgcaactgaa 197 ||||| ||||||||||| |||||||| | |||||||||||||| ||||| || || ||| Sbjct: 815 atgcccaagatgcttattgatggagcagtcgagtatgaagatggcactccagctacagaa 874 Query: 198 gcccagatgggcaaggatgtcgtgtcgttcttgtcgtgggcagctgagcctgaaatggaa 257 ||||||||||| || ||||| || ||||||||||| ||||| || |||||||| |||||| Sbjct: 875 gcccagatgggaaaagatgttgtctcgttcttgtcatgggcggcggagcctgagatggaa 934 Query: 258 gagaggaaactgatgggtgtcaaatggatcttcctactgtcacttgctcttctccaagcc 317 ||||| ||||||||||| || |||||||| || ||||| || || || ||||| ||||| Sbjct: 935 gagagaaaactgatgggagtgaaatggatttttctactctccctcgcacttctgcaagct 994 Query: 318 gcatactaccgtcgcatgaggtggtctgtcctcaagtcccgcaagctggtcct 370 ||||| ||||| ||||||| |||||| ||| |||||| |||||||||||||| Sbjct: 995 gcatattaccggcgcatgaagtggtccgtctacaagtcgcgcaagctggtcct 1047
>gb|AY805120.1| Ornithogalum virens clone 3OvF39 putative cytochrome c1 precursor protein mRNA, partial cds Length = 923 Score = 260 bits (131), Expect = 5e-66 Identities = 290/343 (84%) Strand = Plus / Plus Query: 25 atggccagaactacgtgtttgctcttcttactggttaccatgacccacctgctggtgttc 84 |||| |||||||| || ||||||||||||||||| |||| ||| || |||||||||||| Sbjct: 197 atggacagaactatgtatttgctcttcttactggctaccgtgatcctcctgctggtgttt 256 Query: 85 agattcgtgagggtctgcattacaatccctacttccctggtggtgccatagccatgccta 144 |||||| || || ||||| |||||||| ||||| ||||||||||| ||||| ||||| | Sbjct: 257 cgattcgagaaggactgcactacaatccatactttcctggtggtgctatagctatgccca 316 Query: 145 agatgcttatggatggagctattgagtatgaagatggtactcctgcaactgaagcccaga 204 | |||||||| ||||||||| | ||||||||||||||||| |||||||||||||| |||| Sbjct: 317 aaatgcttatagatggagctttagagtatgaagatggtacccctgcaactgaagctcaga 376 Query: 205 tgggcaaggatgtcgtgtcgttcttgtcgtgggcagctgagcctgaaatggaagagagga 264 |||| ||||| ||||| || || || ||||||||||| ||||| || ||||||||| | | Sbjct: 377 tggggaaggacgtcgtttcatttttatcgtgggcagcggagcccgagatggaagagcgca 436 Query: 265 aactgatgggtgtcaaatggatcttcctactgtcacttgctcttctccaagccgcatact 324 |||||||||| |||||||||| ||| | || ||||| || || || ||||| | ||| | Sbjct: 437 aactgatgggattcaaatggattttcgtgctatcactggcgctccttcaagctggatatt 496 Query: 325 accgtcgcatgaggtggtctgtcctcaagtcccgcaagctggt 367 ||||||| || ||||||||||| ||||||| ||||||||||| Sbjct: 497 accgtcgtttgcggtggtctgtcttcaagtcacgcaagctggt 539
>gb|BT012926.1| Lycopersicon esculentum clone 114089R, mRNA sequence Length = 1382 Score = 238 bits (120), Expect = 2e-59 Identities = 294/352 (83%) Strand = Plus / Plus Query: 33 aactacgtgtttgctcttcttactggttaccatgacccacctgctggtgttcagattcgt 92 ||||| || ||||||||||| ||||| |||| ||||| |||||| |||| |||||| Sbjct: 779 aactatgtttttgctcttctaactggctaccgggaccctcctgcttgtgtctcgattcgg 838 Query: 93 gagggtctgcattacaatccctacttccctggtggtgccatagccatgcctaagatgctt 152 || ||||| || || || || |||||||||||||| || ||||| |||||||| |||||| Sbjct: 839 gaaggtcttcactataacccttacttccctggtggagctatagcaatgcctaaaatgctt 898 Query: 153 atggatggagctattgagtatgaagatggtactcctgcaactgaagcccagatgggcaag 212 | ||||| ||| |||||||||||||||||| ||||||||||| || || ||||| || Sbjct: 899 aatgatggtgctgttgagtatgaagatggtatacctgcaactgaggcacaaatgggaaaa 958 Query: 213 gatgtcgtgtcgttcttgtcgtgggcagctgagcctgaaatggaagagaggaaactgatg 272 ||||| |||||||||||||| ||||| |||||||| |||||||||||||| || |||||| Sbjct: 959 gatgttgtgtcgttcttgtcatgggctgctgagccagaaatggaagagagaaagctgatg 1018 Query: 273 ggtgtcaaatggatcttcctactgtcacttgctcttctccaagccgcatactaccgtcgc 332 ||| |||||||||| ||| | | |||||||| ||||||||||| || |||||||||||| Sbjct: 1019 ggtttcaaatggatattcgtcttatcacttgcacttctccaagcagcttactaccgtcgc 1078 Query: 333 atgaggtggtctgtcctcaagtcccgcaagctggtcctggacgtcgtcaact 384 |||| ||||||||||| || || ||||| ||||||| || || ||||||| Sbjct: 1079 ctgagatggtctgtcctgaaatctcgcaaattggtcctcgatgttgtcaact 1130
>gb|BT014041.1| Lycopersicon esculentum clone 133106F, mRNA sequence Length = 1437 Score = 210 bits (106), Expect = 4e-51 Identities = 280/338 (82%) Strand = Plus / Plus Query: 33 aactacgtgtttgctcttcttactggttaccatgacccacctgctggtgttcagattcgt 92 ||||| |||||||||||||||||||| || | ||| || |||||||||||| ||||||| Sbjct: 729 aactatgtgtttgctcttcttactggctatcgtgatcctcctgctggtgtttcgattcgt 788 Query: 93 gagggtctgcattacaatccctacttccctggtggtgccatagccatgcctaagatgctt 152 || || ||||| |||||||| |||||||||||||| || || || ||||| || |||||| Sbjct: 789 gaaggactgcactacaatccttacttccctggtggagctattgcaatgccaaaaatgctt 848 Query: 153 atggatggagctattgagtatgaagatggtactcctgcaactgaagcccagatgggcaag 212 | ||||| ||| ||||||||||||||||| |||||||| ||||| |||||||| || Sbjct: 849 aatgatggtgctgttgagtatgaagatggtgtccctgcaacagaagctcagatggggaaa 908 Query: 213 gatgtcgtgtcgttcttgtcgtgggcagctgagcctgaaatggaagagaggaaactgatg 272 ||||| ||||| || || | ||||| ||||| || |||||||||||||| ||||||||| Sbjct: 909 gatgtggtgtcatttttaacttgggctgctgaaccagaaatggaagagagaaaactgatg 968 Query: 273 ggtgtcaaatggatcttcctactgtcacttgctcttctccaagccgcatactaccgtcgc 332 || |||| ||||| || ||||||| ||||| || || ||||| || |||||| | || Sbjct: 969 ggcttcaagtggatatttgtactgtcccttgcactgcttcaagctgcttactacaggcgt 1028 Query: 333 atgaggtggtctgtcctcaagtcccgcaagctggtcct 370 ||||||||||||| |||||||| || ||||||||||| Sbjct: 1029 ttgaggtggtctgttctcaagtcacgtaagctggtcct 1066
>emb|X79597.1|STCYC1 S.tuberosum (Desiree) cyc1 II mRNA. for cytochrome c1 Length = 1014 Score = 202 bits (102), Expect = 1e-48 Identities = 279/338 (82%) Strand = Plus / Plus Query: 33 aactacgtgtttgctcttcttactggttaccatgacccacctgctggtgttcagattcgt 92 ||||| |||||||||||||||||||| || | ||| || |||||||||||| ||||||| Sbjct: 432 aactatgtgtttgctcttcttactggctatcgtgatcctcctgctggtgtttcgattcgt 491 Query: 93 gagggtctgcattacaatccctacttccctggtggtgccatagccatgcctaagatgctt 152 || || ||||| |||||||| |||||||||||||| || || || ||||| || |||||| Sbjct: 492 gaaggactgcactacaatccttacttccctggtggagctattgcaatgccaaaaatgctt 551 Query: 153 atggatggagctattgagtatgaagatggtactcctgcaactgaagcccagatgggcaag 212 | ||||| ||| ||||||||||||||||| |||||||| ||||| |||||||| || Sbjct: 552 aatgatggtgctgttgagtatgaagatggtgtccctgcaacagaagctcagatggggaaa 611 Query: 213 gatgtcgtgtcgttcttgtcgtgggcagctgagcctgaaatggaagagaggaaactgatg 272 ||||| ||||| || || | ||||| ||||| || || ||||||||||| ||||||||| Sbjct: 612 gatgtggtgtcatttttaacttgggctgctgaaccagagatggaagagagaaaactgatg 671 Query: 273 ggtgtcaaatggatcttcctactgtcacttgctcttctccaagccgcatactaccgtcgc 332 || |||| ||||| || ||||||| ||||| || || ||||| || |||||| | || Sbjct: 672 ggcttcaagtggatatttgtactgtcccttgcactacttcaagctgcttactacaggcgt 731 Query: 333 atgaggtggtctgtcctcaagtcccgcaagctggtcct 370 ||||||||||||| |||||||| || ||||||||||| Sbjct: 732 ttgaggtggtctgttctcaagtcacggaagctggtcct 769
>gb|AC093953.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OJ1057_C01, complete sequence Length = 142752 Score = 172 bits (87), Expect = 9e-40 Identities = 111/119 (93%) Strand = Plus / Minus Query: 85 agattcgtgagggtctgcattacaatccctacttccctggtggtgccatagccatgccta 144 |||| ||||||||| ||||||||||||||||||||||||||||||||||||| ||||| | Sbjct: 93790 agatccgtgagggtttgcattacaatccctacttccctggtggtgccatagctatgccca 93731 Query: 145 agatgcttatggatggagctattgagtatgaagatggtactcctgcaactgaagcccag 203 |||||||||| ||||||||| |||| |||||||||||||||||||| |||||||||||| Sbjct: 93730 agatgcttatagatggagctgttgaatatgaagatggtactcctgccactgaagcccag 93672 Score = 163 bits (82), Expect = 8e-37 Identities = 122/134 (91%), Gaps = 1/134 (0%) Strand = Plus / Minus Query: 269 gatgggtgtcaaatggatcttcctactgtcacttgctcttctccaagccgcatactaccg 328 |||||| || |||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 93428 gatgggagtgaaatggatcttcctactgtcacttgcacttctccaagccgcatactaccg 93369 Query: 329 tcgcatgaggtggtctgtcctcaagtcccgcaagctggtcctggacgtcgtcaact-agt 387 ||||||||||||||| ||||| ||||| |||||||||||||| || || ||||||| || Sbjct: 93368 tcgcatgaggtggtccgtcctgaagtcacgcaagctggtccttgatgttgtcaactgagg 93309 Query: 388 gaccattgtttctt 401 ||||| |||||||| Sbjct: 93308 gaccactgtttctt 93295 Score = 105 bits (53), Expect = 2e-19 Identities = 65/69 (94%) Strand = Plus / Minus Query: 201 cagatgggcaaggatgtcgtgtcgttcttgtcgtgggcagctgagcctgaaatggaagag 260 |||||||||||||||||||| ||||||||||| ||||||||||| ||||| ||||||||| Sbjct: 93580 cagatgggcaaggatgtcgtttcgttcttgtcatgggcagctgaacctgagatggaagag 93521 Query: 261 aggaaactg 269 ||||||||| Sbjct: 93520 aggaaactg 93512 Score = 103 bits (52), Expect = 7e-19 Identities = 67/72 (93%) Strand = Plus / Minus Query: 15 gcaaggcacgatggccagaactacgtgtttgctcttcttactggttaccatgacccacct 74 ||||||||| ||||||||||||| ||||||||||||||||||||||||| ||| |||||| Sbjct: 94356 gcaaggcacaatggccagaactatgtgtttgctcttcttactggttaccgtgatccacct 94297 Query: 75 gctggtgttcag 86 || ||||||||| Sbjct: 94296 gccggtgttcag 94285 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 513 tgttttcttcctctgctgcaaaagcattt 541 ||||||||||||||||||||||||||||| Sbjct: 93196 tgttttcttcctctgctgcaaaagcattt 93168
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 172 bits (87), Expect = 9e-40 Identities = 111/119 (93%) Strand = Plus / Minus Query: 85 agattcgtgagggtctgcattacaatccctacttccctggtggtgccatagccatgccta 144 |||| ||||||||| ||||||||||||||||||||||||||||||||||||| ||||| | Sbjct: 13410327 agatccgtgagggtttgcattacaatccctacttccctggtggtgccatagctatgccca 13410268 Query: 145 agatgcttatggatggagctattgagtatgaagatggtactcctgcaactgaagcccag 203 |||||||||| ||||||||| |||| |||||||||||||||||||| |||||||||||| Sbjct: 13410267 agatgcttatagatggagctgttgaatatgaagatggtactcctgccactgaagcccag 13410209 Score = 163 bits (82), Expect = 8e-37 Identities = 122/134 (91%), Gaps = 1/134 (0%) Strand = Plus / Minus Query: 269 gatgggtgtcaaatggatcttcctactgtcacttgctcttctccaagccgcatactaccg 328 |||||| || |||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 13409965 gatgggagtgaaatggatcttcctactgtcacttgcacttctccaagccgcatactaccg 13409906 Query: 329 tcgcatgaggtggtctgtcctcaagtcccgcaagctggtcctggacgtcgtcaact-agt 387 ||||||||||||||| ||||| ||||| |||||||||||||| || || ||||||| || Sbjct: 13409905 tcgcatgaggtggtccgtcctgaagtcacgcaagctggtccttgatgttgtcaactgagg 13409846 Query: 388 gaccattgtttctt 401 ||||| |||||||| Sbjct: 13409845 gaccactgtttctt 13409832 Score = 105 bits (53), Expect = 2e-19 Identities = 65/69 (94%) Strand = Plus / Minus Query: 201 cagatgggcaaggatgtcgtgtcgttcttgtcgtgggcagctgagcctgaaatggaagag 260 |||||||||||||||||||| ||||||||||| ||||||||||| ||||| ||||||||| Sbjct: 13410117 cagatgggcaaggatgtcgtttcgttcttgtcatgggcagctgaacctgagatggaagag 13410058 Query: 261 aggaaactg 269 ||||||||| Sbjct: 13410057 aggaaactg 13410049 Score = 103 bits (52), Expect = 7e-19 Identities = 67/72 (93%) Strand = Plus / Minus Query: 15 gcaaggcacgatggccagaactacgtgtttgctcttcttactggttaccatgacccacct 74 ||||||||| ||||||||||||| ||||||||||||||||||||||||| ||| |||||| Sbjct: 13410893 gcaaggcacaatggccagaactatgtgtttgctcttcttactggttaccgtgatccacct 13410834 Query: 75 gctggtgttcag 86 || ||||||||| Sbjct: 13410833 gccggtgttcag 13410822 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 513 tgttttcttcctctgctgcaaaagcattt 541 ||||||||||||||||||||||||||||| Sbjct: 13409733 tgttttcttcctctgctgcaaaagcattt 13409705
>gb|DQ294620.1| Arachis hypogaea cytochrome c1-like mRNA, partial sequence Length = 615 Score = 163 bits (82), Expect = 8e-37 Identities = 208/250 (83%) Strand = Plus / Plus Query: 25 atggccagaactacgtgtttgctcttcttactggttaccatgacccacctgctggtgttc 84 |||| ||||| || |||||||| ||||| |||||||| | ||| || |||||||||||| Sbjct: 257 atggtcagaattatgtgtttgcccttctaactggttatcgtgatccccctgctggtgttt 316 Query: 85 agattcgtgagggtctgcattacaatccctacttccctggtggtgccatagccatgccta 144 |||| | ||||||||||| || || || || ||||||||||||||||| |||||||||| Sbjct: 317 cgattagagagggtctgcactataacccttatttccctggtggtgccattgccatgccta 376 Query: 145 agatgcttatggatggagctattgagtatgaagatggtactcctgcaactgaagcccaga 204 | ||||||| ||||| ||| |||| ||||| ||||||||||| || |||||| | |||| Sbjct: 377 aaatgcttaacgatggtgctgttgaatatgaggatggtactcccgccactgaatctcaga 436 Query: 205 tgggcaaggatgtcgtgtcgttcttgtcgtgggcagctgagcctgaaatggaagagagga 264 |||| || ||||| ||||| ||||| || ||||| || || || || ||||||||||| | Sbjct: 437 tggggaaagatgttgtgtcattcttatcttgggctgccgaaccggagatggaagagagaa 496 Query: 265 aactgatggg 274 |||||||||| Sbjct: 497 aactgatggg 506 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 321 tactaccgtcgcatgaggtggtctgtcctcaagtcccgcaagctggtcctggacgtcgtc 380 |||||||||||| | ||||||||||| || ||||| ||||||||||| || || |||||| Sbjct: 553 tactaccgtcgccttaggtggtctgttctaaagtctcgcaagctggttcttgatgtcgtc 612 Query: 381 aa 382 || Sbjct: 613 aa 614
>gb|AY088099.1| Arabidopsis thaliana clone 41320 mRNA, complete sequence Length = 1361 Score = 153 bits (77), Expect = 8e-34 Identities = 230/281 (81%) Strand = Plus / Plus Query: 105 tacaatccctacttccctggtggtgccatagccatgcctaagatgcttatggatggagct 164 |||||||| || |||||||| || || || || ||||| || ||||| | |||| |||| Sbjct: 756 tacaatccttatttccctgggggagcaattgctatgccgaaaatgctcaatgatgaagct 815 Query: 165 attgagtatgaagatggtactcctgcaactgaagcccagatgggcaaggatgtcgtgtcg 224 ||||||||||||||||| || || || || || |||||||| || ||| | || || Sbjct: 816 gttgagtatgaagatggtgtccccgccacagaggcacagatgggtaaagatattgtatca 875 Query: 225 ttcttgtcgtgggcagctgagcctgaaatggaagagaggaaactgatgggtgtcaaatgg 284 |||||| | ||||||||||| || ||||||||||||||||||||||||||| |||||||| Sbjct: 876 ttcttggcctgggcagctgaaccagaaatggaagagaggaaactgatgggtttcaaatgg 935 Query: 285 atcttcctactgtcacttgctcttctccaagccgcatactaccgtcgcatgaggtggtct 344 || |||||||| || || |||||||||||||| || |||||| | || ||| ||||| Sbjct: 936 atattcctactctctctcgctcttctccaagctgcttactacaggcgactgaaatggtcg 995 Query: 345 gtcctcaagtcccgcaagctggtcctggacgtcgtcaacta 385 || |||||||||||||||||||| || ||||| || ||||| Sbjct: 996 gttctcaagtcccgcaagctggttcttgacgtggttaacta 1036
>emb|X62124.1|STCYC1G S.tuberosum cycl gene encoding cytochrome c1 Length = 1264 Score = 151 bits (76), Expect = 3e-33 Identities = 283/352 (80%) Strand = Plus / Plus Query: 33 aactacgtgtttgctcttcttactggttaccatgacccacctgctggtgttcagattcgt 92 ||||| || ||||||||||| |||| |||| ||||| ||||||||||| |||||| Sbjct: 722 aactatgtttttgctcttctaactgcgtaccgcgaccctcctgctggtgtctcgattcga 781 Query: 93 gagggtctgcattacaatccctacttccctggtggtgccatagccatgcctaagatgctt 152 || || || || || ||||| |||||||||||||| || ||||| |||||||| |||||| Sbjct: 782 gaaggacttcactataatccttacttccctggtggagctatagcaatgcctaaaatgctt 841 Query: 153 atggatggagctattgagtatgaagatggtactcctgcaactgaagcccagatgggcaag 212 | ||||| || |||||||||| ||||| | |||||||| || || |||||||| || Sbjct: 842 aatgatggtgccgttgagtatgaggatggcatccctgcaaccgaggcacagatgggaaaa 901 Query: 213 gatgtcgtgtcgttcttgtcgtgggcagctgagcctgaaatggaagagaggaaactgatg 272 ||||| || || |||||||| ||||| || ||||| || ||||||||||| || |||||| Sbjct: 902 gatgttgtctcattcttgtcctgggctgcggagccagagatggaagagagaaagctgatg 961 Query: 273 ggtgtcaaatggatcttcctactgtcacttgctcttctccaagccgcatactaccgtcgc 332 ||| |||||||||| || | | || || || ||||||||||| || |||||||| || Sbjct: 962 ggtttcaaatggatatttgttttatctctcgcacttctccaagcagcttactaccgccgt 1021 Query: 333 atgaggtggtctgtcctcaagtcccgcaagctggtcctggacgtcgtcaact 384 |||| |||||||||||||| || |||||| |||| || || || ||||||| Sbjct: 1022 ttgagatggtctgtcctcaaatctcgcaagttggttcttgatgttgtcaact 1073
>ref|NM_113638.2| Arabidopsis thaliana electron transporter/ electron transporter, transferring electrons within CoQH2-cytochrome c reductase complex AT3G27240 mRNA, complete cds Length = 1414 Score = 145 bits (73), Expect = 2e-31 Identities = 229/281 (81%) Strand = Plus / Plus Query: 105 tacaatccctacttccctggtggtgccatagccatgcctaagatgcttatggatggagct 164 |||||||| || |||||||| || || || || ||||| || ||||| | |||| |||| Sbjct: 778 tacaatccttatttccctgggggagcaattgctatgccgaaaatgctcaatgatgaagct 837 Query: 165 attgagtatgaagatggtactcctgcaactgaagcccagatgggcaaggatgtcgtgtcg 224 ||||||||||||||||| || || || || || |||||||| || ||| | || || Sbjct: 838 gttgagtatgaagatggtgtccccgccacagaggcacagatgggtaaagatattgtatca 897 Query: 225 ttcttgtcgtgggcagctgagcctgaaatggaagagaggaaactgatgggtgtcaaatgg 284 |||||| | ||||||||||| || ||||||||||||||||||||||||||| |||||||| Sbjct: 898 ttcttggcctgggcagctgaaccagaaatggaagagaggaaactgatgggtttcaaatgg 957 Query: 285 atcttcctactgtcacttgctcttctccaagccgcatactaccgtcgcatgaggtggtct 344 || |||||||| || || |||||||||||||| || |||||| | || | | ||||| Sbjct: 958 atattcctactctctctcgctcttctccaagctgcttactacaggcgactaaaatggtcg 1017 Query: 345 gtcctcaagtcccgcaagctggtcctggacgtcgtcaacta 385 || |||||||||||||||||||| || ||||| || ||||| Sbjct: 1018 gttctcaagtcccgcaagctggttcttgacgtggttaacta 1058
>gb|AF458338.1|AF458338 Arabidopsis thaliana AT3g27240/K17E12_6 mRNA, complete cds Length = 924 Score = 145 bits (73), Expect = 2e-31 Identities = 229/281 (81%) Strand = Plus / Plus Query: 105 tacaatccctacttccctggtggtgccatagccatgcctaagatgcttatggatggagct 164 |||||||| || |||||||| || || || || ||||| || ||||| | |||| |||| Sbjct: 643 tacaatccttatttccctgggggagcaattgctatgccgaaaatgctcaatgatgaagct 702 Query: 165 attgagtatgaagatggtactcctgcaactgaagcccagatgggcaaggatgtcgtgtcg 224 ||||||||||||||||| || || || || || |||||||| || ||| | || || Sbjct: 703 gttgagtatgaagatggtgtccccgccacagaggcacagatgggtaaagatattgtatca 762 Query: 225 ttcttgtcgtgggcagctgagcctgaaatggaagagaggaaactgatgggtgtcaaatgg 284 |||||| | ||||||||||| || ||||||||||||||||||||||||||| |||||||| Sbjct: 763 ttcttggcctgggcagctgaaccagaaatggaagagaggaaactgatgggtttcaaatgg 822 Query: 285 atcttcctactgtcacttgctcttctccaagccgcatactaccgtcgcatgaggtggtct 344 || |||||||| || || |||||||||||||| || |||||| | || | | ||||| Sbjct: 823 atattcctactctctctcgctcttctccaagctgcttactacaggcgactaaaatggtcg 882 Query: 345 gtcctcaagtcccgcaagctggtcctggacgtcgtcaacta 385 || |||||||||||||||||||| || ||||| || ||||| Sbjct: 883 gttctcaagtcccgcaagctggttcttgacgtggttaacta 923
>gb|AY054246.1| Arabidopsis thaliana AT3g27240/K17E12_6 mRNA, complete cds Length = 1414 Score = 145 bits (73), Expect = 2e-31 Identities = 229/281 (81%) Strand = Plus / Plus Query: 105 tacaatccctacttccctggtggtgccatagccatgcctaagatgcttatggatggagct 164 |||||||| || |||||||| || || || || ||||| || ||||| | |||| |||| Sbjct: 778 tacaatccttatttccctgggggagcaattgctatgccgaaaatgctcaatgatgaagct 837 Query: 165 attgagtatgaagatggtactcctgcaactgaagcccagatgggcaaggatgtcgtgtcg 224 ||||||||||||||||| || || || || || |||||||| || ||| | || || Sbjct: 838 gttgagtatgaagatggtgtccccgccacagaggcacagatgggtaaagatattgtatca 897 Query: 225 ttcttgtcgtgggcagctgagcctgaaatggaagagaggaaactgatgggtgtcaaatgg 284 |||||| | ||||||||||| || ||||||||||||||||||||||||||| |||||||| Sbjct: 898 ttcttggcctgggcagctgaaccagaaatggaagagaggaaactgatgggtttcaaatgg 957 Query: 285 atcttcctactgtcacttgctcttctccaagccgcatactaccgtcgcatgaggtggtct 344 || |||||||| || || |||||||||||||| || |||||| | || | | ||||| Sbjct: 958 atattcctactctctctcgctcttctccaagctgcttactacaggcgactaaaatggtcg 1017 Query: 345 gtcctcaagtcccgcaagctggtcctggacgtcgtcaacta 385 || |||||||||||||||||||| || ||||| || ||||| Sbjct: 1018 gttctcaagtcccgcaagctggttcttgacgtggttaacta 1058
>emb|BX824887.1|CNS0A6WM Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH80ZA02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1297 Score = 145 bits (73), Expect = 2e-31 Identities = 229/281 (81%) Strand = Plus / Plus Query: 105 tacaatccctacttccctggtggtgccatagccatgcctaagatgcttatggatggagct 164 |||||||| || |||||||| || || || || ||||| || ||||| | |||| |||| Sbjct: 727 tacaatccttatttccctgggggagcaattgctatgccgaaaatgctcaatgatgaagct 786 Query: 165 attgagtatgaagatggtactcctgcaactgaagcccagatgggcaaggatgtcgtgtcg 224 ||||||||||||||||| || || || || || |||||||| || ||| | || || Sbjct: 787 gttgagtatgaagatggtgtccccgccacagaggcacagatgggtaaagatattgtatca 846 Query: 225 ttcttgtcgtgggcagctgagcctgaaatggaagagaggaaactgatgggtgtcaaatgg 284 |||||| | ||||||||||| || ||||||||||||||||||||||||||| |||||||| Sbjct: 847 ttcttggcctgggcagctgaaccagaaatggaagagaggaaactgatgggtttcaaatgg 906 Query: 285 atcttcctactgtcacttgctcttctccaagccgcatactaccgtcgcatgaggtggtct 344 || |||||||| || || |||||||||||||| || |||||| | || | | ||||| Sbjct: 907 atattcctactctctctcgctcttctccaagctgcttactacaggcgactaaaatggtcg 966 Query: 345 gtcctcaagtcccgcaagctggtcctggacgtcgtcaacta 385 || |||||||||||||||||||| || ||||| || ||||| Sbjct: 967 gttctcaagtcccgcaagctggttcttgacgtggttaacta 1007
>emb|BX824618.1|CNS0A4TF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH60ZA03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1238 Score = 145 bits (73), Expect = 2e-31 Identities = 229/281 (81%) Strand = Plus / Plus Query: 105 tacaatccctacttccctggtggtgccatagccatgcctaagatgcttatggatggagct 164 |||||||| || |||||||| || || || || ||||| || ||||| | |||| |||| Sbjct: 726 tacaatccttatttccctgggggagcaattgctatgccgaaaatgctcaatgatgaagct 785 Query: 165 attgagtatgaagatggtactcctgcaactgaagcccagatgggcaaggatgtcgtgtcg 224 ||||||||||||||||| || || || || || |||||||| || ||| | || || Sbjct: 786 gttgagtatgaagatggtgtccccgccacagaggcacagatgggtaaagatattgtatca 845 Query: 225 ttcttgtcgtgggcagctgagcctgaaatggaagagaggaaactgatgggtgtcaaatgg 284 |||||| | ||||||||||| || ||||||||||||||||||||||||||| |||||||| Sbjct: 846 ttcttggcctgggcagctgaaccagaaatggaagagaggaaactgatgggtttcaaatgg 905 Query: 285 atcttcctactgtcacttgctcttctccaagccgcatactaccgtcgcatgaggtggtct 344 || |||||||| || || |||||||||||||| || |||||| | || | | ||||| Sbjct: 906 atattcctactctctctcgctcttctccaagctgcttactacaggcgactaaaatggtcg 965 Query: 345 gtcctcaagtcccgcaagctggtcctggacgtcgtcaacta 385 || |||||||||||||||||||| || ||||| || ||||| Sbjct: 966 gttctcaagtcccgcaagctggttcttgacgtggttaacta 1006
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 141 bits (71), Expect = 3e-30 Identities = 107/119 (89%) Strand = Plus / Plus Query: 85 agattcgtgagggtctgcattacaatccctacttccctggtggtgccatagccatgccta 144 |||||||||| || ||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 41070824 agattcgtgaaggcttgcattacaatccctacttccctggtggtgccatagccatgccca 41070883 Query: 145 agatgcttatggatggagctattgagtatgaagatggtactcctgcaactgaagcccag 203 |||||||||| |||||||| | |||||||||||||| ||||| || || ||||||||| Sbjct: 41070884 agatgcttattgatggagcagtcgagtatgaagatggcactccagctacagaagcccag 41070942 Score = 75.8 bits (38), Expect = 2e-10 Identities = 59/66 (89%) Strand = Plus / Plus Query: 18 aggcacgatggccagaactacgtgtttgctcttcttactggttaccatgacccacctgct 77 |||||| ||||||||||||| || ||||||||||| |||||||| | ||| ||||||||| Sbjct: 41069569 aggcacaatggccagaactatgtttttgctcttctcactggttatcgtgatccacctgct 41069628 Query: 78 ggtgtt 83 |||||| Sbjct: 41069629 ggtgtt 41069634 Score = 67.9 bits (34), Expect = 4e-08 Identities = 85/102 (83%) Strand = Plus / Plus Query: 269 gatgggtgtcaaatggatcttcctactgtcacttgctcttctccaagccgcatactaccg 328 |||||| || |||||||| || ||||| || || || ||||| ||||| ||||| ||||| Sbjct: 41071188 gatgggagtgaaatggatttttctactctccctcgcacttctgcaagctgcatattaccg 41071247 Query: 329 tcgcatgaggtggtctgtcctcaagtcccgcaagctggtcct 370 ||||||| |||||| ||| |||||| |||||||||||||| Sbjct: 41071248 gcgcatgaagtggtccgtctacaagtcgcgcaagctggtcct 41071289 Score = 63.9 bits (32), Expect = 6e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 202 agatgggcaaggatgtcgtgtcgttcttgtcgtgggcagctgagcctgaaatggaagaga 261 ||||||| || ||||| || ||||||||||| ||||| || |||||||| |||||||||| Sbjct: 41071037 agatgggaaaagatgttgtctcgttcttgtcatgggcggcggagcctgagatggaagaga 41071096 Query: 262 ggaaactg 269 | |||||| Sbjct: 41071097 gaaaactg 41071104 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 488 atcataccttgggtacaatct 508 ||||||||||||||||||||| Sbjct: 13388389 atcataccttgggtacaatct 13388369
>dbj|AP003266.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0492G09 Length = 142239 Score = 141 bits (71), Expect = 3e-30 Identities = 107/119 (89%) Strand = Plus / Plus Query: 85 agattcgtgagggtctgcattacaatccctacttccctggtggtgccatagccatgccta 144 |||||||||| || ||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 107754 agattcgtgaaggcttgcattacaatccctacttccctggtggtgccatagccatgccca 107813 Query: 145 agatgcttatggatggagctattgagtatgaagatggtactcctgcaactgaagcccag 203 |||||||||| |||||||| | |||||||||||||| ||||| || || ||||||||| Sbjct: 107814 agatgcttattgatggagcagtcgagtatgaagatggcactccagctacagaagcccag 107872 Score = 75.8 bits (38), Expect = 2e-10 Identities = 59/66 (89%) Strand = Plus / Plus Query: 18 aggcacgatggccagaactacgtgtttgctcttcttactggttaccatgacccacctgct 77 |||||| ||||||||||||| || ||||||||||| |||||||| | ||| ||||||||| Sbjct: 106499 aggcacaatggccagaactatgtttttgctcttctcactggttatcgtgatccacctgct 106558 Query: 78 ggtgtt 83 |||||| Sbjct: 106559 ggtgtt 106564 Score = 67.9 bits (34), Expect = 4e-08 Identities = 85/102 (83%) Strand = Plus / Plus Query: 269 gatgggtgtcaaatggatcttcctactgtcacttgctcttctccaagccgcatactaccg 328 |||||| || |||||||| || ||||| || || || ||||| ||||| ||||| ||||| Sbjct: 108118 gatgggagtgaaatggatttttctactctccctcgcacttctgcaagctgcatattaccg 108177 Query: 329 tcgcatgaggtggtctgtcctcaagtcccgcaagctggtcct 370 ||||||| |||||| ||| |||||| |||||||||||||| Sbjct: 108178 gcgcatgaagtggtccgtctacaagtcgcgcaagctggtcct 108219 Score = 63.9 bits (32), Expect = 6e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 202 agatgggcaaggatgtcgtgtcgttcttgtcgtgggcagctgagcctgaaatggaagaga 261 ||||||| || ||||| || ||||||||||| ||||| || |||||||| |||||||||| Sbjct: 107967 agatgggaaaagatgttgtctcgttcttgtcatgggcggcggagcctgagatggaagaga 108026 Query: 262 ggaaactg 269 | |||||| Sbjct: 108027 gaaaactg 108034
>emb|BX823783.1|CNS0A6LU Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS75ZC04 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1366 Score = 137 bits (69), Expect = 5e-29 Identities = 228/281 (81%) Strand = Plus / Plus Query: 105 tacaatccctacttccctggtggtgccatagccatgcctaagatgcttatggatggagct 164 |||||||| || |||||||| || || || || ||||| || ||||| | |||| |||| Sbjct: 744 tacaatccttatttccctgggggagcaattgctatgccgaaaatgctcaatgatgaagct 803 Query: 165 attgagtatgaagatggtactcctgcaactgaagcccagatgggcaaggatgtcgtgtcg 224 ||||||||||||||||| || || || || || |||||||| || ||| | || || Sbjct: 804 gttgagtatgaagatggtgtccccgccacagaggcacagatgggtaaagatattgtatca 863 Query: 225 ttcttgtcgtgggcagctgagcctgaaatggaagagaggaaactgatgggtgtcaaatgg 284 ||||| | ||||||||||| || ||||||||||||||||||||||||||| |||||||| Sbjct: 864 ttcttcgcctgggcagctgaaccagaaatggaagagaggaaactgatgggtctcaaatgg 923 Query: 285 atcttcctactgtcacttgctcttctccaagccgcatactaccgtcgcatgaggtggtct 344 || |||||||| || || |||||||||||||| || |||||| | || | | ||||| Sbjct: 924 atattcctactctctctcgctcttctccaagctgcttactacaggcgactaaaatggtcg 983 Query: 345 gtcctcaagtcccgcaagctggtcctggacgtcgtcaacta 385 || |||||||||||||||||||| || ||||| || ||||| Sbjct: 984 gttctcaagtcccgcaagctggttcttgacgtggttaacta 1024
>ref|NM_123446.3| Arabidopsis thaliana electron transporter/ electron transporter, transferring electrons within CoQH2-cytochrome c reductase complex AT5G40810 mRNA, complete cds Length = 1366 Score = 131 bits (66), Expect = 3e-27 Identities = 162/194 (83%) Strand = Plus / Plus Query: 105 tacaatccctacttccctggtggtgccatagccatgcctaagatgcttatggatggagct 164 |||||||| || ||||||||||| || || || ||||| || ||||| | |||| |||| Sbjct: 768 tacaatccttatttccctggtggagcaatcgctatgccaaaaatgctcaacgatgaagct 827 Query: 165 attgagtatgaagatggtactcctgcaactgaagcccagatgggcaaggatgtcgtgtcg 224 | || ||||||||||| ||||||||||| ||||| |||||||| || ||||| || || Sbjct: 828 gtggaatatgaagatggaactcctgcaacagaagcacagatgggtaaagatgttgtatcc 887 Query: 225 ttcttgtcgtgggcagctgagcctgaaatggaagagaggaaactgatgggtgtcaaatgg 284 |||||||| ||||||||||| || || ||||||||||||||| ||||||| |||||||| Sbjct: 888 ttcttgtcctgggcagctgaaccagagatggaagagaggaaattgatggggttcaaatgg 947 Query: 285 atcttcctactgtc 298 || ||| ||||||| Sbjct: 948 atattcttactgtc 961
>gb|AY116937.1| Arabidopsis thaliana AT5g40810/MHK7_4 mRNA, complete cds Length = 924 Score = 131 bits (66), Expect = 3e-27 Identities = 162/194 (83%) Strand = Plus / Plus Query: 105 tacaatccctacttccctggtggtgccatagccatgcctaagatgcttatggatggagct 164 |||||||| || ||||||||||| || || || ||||| || ||||| | |||| |||| Sbjct: 643 tacaatccttatttccctggtggagcaatcgctatgccaaaaatgctcaacgatgaagct 702 Query: 165 attgagtatgaagatggtactcctgcaactgaagcccagatgggcaaggatgtcgtgtcg 224 | || ||||||||||| ||||||||||| ||||| |||||||| || ||||| || || Sbjct: 703 gtggaatatgaagatggaactcctgcaacagaagcacagatgggtaaagatgttgtatcc 762 Query: 225 ttcttgtcgtgggcagctgagcctgaaatggaagagaggaaactgatgggtgtcaaatgg 284 |||||||| ||||||||||| || || ||||||||||||||| ||||||| |||||||| Sbjct: 763 ttcttgtcctgggcagctgaaccagagatggaagagaggaaattgatggggttcaaatgg 822 Query: 285 atcttcctactgtc 298 || ||| ||||||| Sbjct: 823 atattcttactgtc 836
>gb|AY050340.1| Arabidopsis thaliana AT5g40810/MHK7_4 mRNA, complete cds Length = 1238 Score = 131 bits (66), Expect = 3e-27 Identities = 162/194 (83%) Strand = Plus / Plus Query: 105 tacaatccctacttccctggtggtgccatagccatgcctaagatgcttatggatggagct 164 |||||||| || ||||||||||| || || || ||||| || ||||| | |||| |||| Sbjct: 715 tacaatccttatttccctggtggagcaatcgctatgccaaaaatgctcaacgatgaagct 774 Query: 165 attgagtatgaagatggtactcctgcaactgaagcccagatgggcaaggatgtcgtgtcg 224 | || ||||||||||| ||||||||||| ||||| |||||||| || ||||| || || Sbjct: 775 gtggaatatgaagatggaactcctgcaacagaagcacagatgggtaaagatgttgtatcc 834 Query: 225 ttcttgtcgtgggcagctgagcctgaaatggaagagaggaaactgatgggtgtcaaatgg 284 |||||||| ||||||||||| || || ||||||||||||||| ||||||| |||||||| Sbjct: 835 ttcttgtcctgggcagctgaaccagagatggaagagaggaaattgatggggttcaaatgg 894 Query: 285 atcttcctactgtc 298 || ||| ||||||| Sbjct: 895 atattcttactgtc 908
>emb|BX829693.1|CNS0A056 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB2ZE01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1241 Score = 131 bits (66), Expect = 3e-27 Identities = 162/194 (83%) Strand = Plus / Plus Query: 105 tacaatccctacttccctggtggtgccatagccatgcctaagatgcttatggatggagct 164 |||||||| || ||||||||||| || || || ||||| || ||||| | |||| |||| Sbjct: 768 tacaatccttatttccctggtggagcaatcgctatgccaaaaatgctcaacgatgaagct 827 Query: 165 attgagtatgaagatggtactcctgcaactgaagcccagatgggcaaggatgtcgtgtcg 224 | || ||||||||||| ||||||||||| ||||| |||||||| || ||||| || || Sbjct: 828 gtggaatatgaagatggaactcctgcaacagaagcacagatgggtaaagatgttgtatcc 887 Query: 225 ttcttgtcgtgggcagctgagcctgaaatggaagagaggaaactgatgggtgtcaaatgg 284 |||||||| ||||||||||| || || ||||||||||||||| ||||||| |||||||| Sbjct: 888 ttcttgtcctgggcagctgaaccagagatggaagagaggaaattgatggggttcaaatgg 947 Query: 285 atcttcctactgtc 298 || ||| ||||||| Sbjct: 948 atattcttactgtc 961
>dbj|AK073125.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033010L17, full insert sequence Length = 2109 Score = 117 bits (59), Expect = 4e-23 Identities = 74/79 (93%) Strand = Plus / Plus Query: 85 agattcgtgagggtctgcattacaatccctacttccctggtggtgccatagccatgccta 144 |||||||||| || ||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 2026 agattcgtgaaggcttgcattacaatccctacttccctggtggtgccatagccatgccca 2085 Query: 145 agatgcttatggatggagc 163 |||||||||| |||||||| Sbjct: 2086 agatgcttattgatggagc 2104 Score = 75.8 bits (38), Expect = 2e-10 Identities = 59/66 (89%) Strand = Plus / Plus Query: 18 aggcacgatggccagaactacgtgtttgctcttcttactggttaccatgacccacctgct 77 |||||| ||||||||||||| || ||||||||||| |||||||| | ||| ||||||||| Sbjct: 771 aggcacaatggccagaactatgtttttgctcttctcactggttatcgtgatccacctgct 830 Query: 78 ggtgtt 83 |||||| Sbjct: 831 ggtgtt 836
>emb|BX824810.1|CNS0A6Y4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH74ZE04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1267 Score = 113 bits (57), Expect = 7e-22 Identities = 181/221 (81%), Gaps = 1/221 (0%) Strand = Plus / Plus Query: 166 ttgagtatgaagatggtactcctgcaactgaagcccagatgggcaaggatgtcgtgtcgt 225 ||||||||||||||||| || || || || || |||||||| || ||| | || || | Sbjct: 762 ttgagtatgaagatggtgtccccgccacagaggcacagatgggtaaagatattgtatcat 821 Query: 226 tcttgtcgtgggcagctgagcctgaaatggaagagaggaaactga-tgggtgtcaaatgg 284 ||||| | ||||||||||| || |||||||||||||||||||||| ||||| |||||||| Sbjct: 822 tcttggcctgggcagctgaaccagaaatggaagagaggaaactgattgggtttcaaatgg 881 Query: 285 atcttcctactgtcacttgctcttctccaagccgcatactaccgtcgcatgaggtggtct 344 || |||||||| | || |||||||||||||| || |||||| | || | | ||||| Sbjct: 882 atattcctactatatctcgctcttctccaagctgcttactacaggcgactaaaatggtcg 941 Query: 345 gtcctcaagtcccgcaagctggtcctggacgtcgtcaacta 385 || |||||||||||||||||||| || ||||| || ||||| Sbjct: 942 gttctcaagtcccgcaagctggttcttgacgtggttaacta 982
>gb|AC185524.1| Medicago truncatula clone mth2-62g23, complete sequence Length = 40651 Score = 111 bits (56), Expect = 3e-21 Identities = 89/100 (89%) Strand = Plus / Plus Query: 100 tgcattacaatccctacttccctggtggtgccatagccatgcctaagatgcttatggatg 159 ||||||||||||| |||||||||||||| ||||| ||||||||||||||||||| |||| Sbjct: 10240 tgcattacaatccttacttccctggtggagccattgccatgcctaagatgcttaatgatg 10299 Query: 160 gagctattgagtatgaagatggtactcctgcaactgaagc 199 | ||| |||| |||||||||||||| ||||| || ||||| Sbjct: 10300 gcgctgttgaatatgaagatggtacccctgctaccgaagc 10339 Score = 58.0 bits (29), Expect = 4e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 201 cagatgggcaaggatgtcgtgtcgttcttgtcgtgggcagctgagcctgaaatggaagag 260 |||||||| || ||||| ||||| || ||||| |||||||| || ||||| ||||||||| Sbjct: 10454 cagatggggaaagatgttgtgtcatttttgtcttgggcagcggaacctgagatggaagag 10513 Query: 261 aggaaactg 269 || |||||| Sbjct: 10514 agaaaactg 10522 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 25 atggccagaactacgtgtttgctcttcttactggttaccatgacccacctgctggtgtt 83 |||| |||||||| ||||||||||| || || ||||| | |||||| |||||||||||| Sbjct: 9561 atggtcagaactatgtgtttgctctcctaaccggttatcgtgacccccctgctggtgtt 9619 Score = 46.1 bits (23), Expect = 0.14 Identities = 62/75 (82%) Strand = Plus / Plus Query: 312 caagccgcatactaccgtcgcatgaggtggtctgtcctcaagtcccgcaagctggtcctg 371 |||||||||||||| ||||| | |||||||||| || ||||| |||||| |||| || Sbjct: 10646 caagccgcatactatcgtcgtcttcggtggtctgttcttaagtctcgcaagttggttctt 10705 Query: 372 gacgtcgtcaactag 386 || || ||||||||| Sbjct: 10706 gatgttgtcaactag 10720
>gb|AC138464.19| Medicago truncatula clone mth2-29i23, complete sequence Length = 134105 Score = 111 bits (56), Expect = 3e-21 Identities = 89/100 (89%) Strand = Plus / Plus Query: 100 tgcattacaatccctacttccctggtggtgccatagccatgcctaagatgcttatggatg 159 ||||||||||||| |||||||||||||| ||||| ||||||||||||||||||| |||| Sbjct: 106632 tgcattacaatccttacttccctggtggagccattgccatgcctaagatgcttaatgatg 106691 Query: 160 gagctattgagtatgaagatggtactcctgcaactgaagc 199 | ||| |||| |||||||||||||| ||||| || ||||| Sbjct: 106692 gcgctgttgaatatgaagatggtacccctgctaccgaagc 106731 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 25 atggccagaactacgtgtttgctcttcttactggttaccatgacccacctgctggtgtt 83 |||| |||||||||||||||||||||||||| ||||| | |||||| |||||||||||| Sbjct: 77401 atggtcagaactacgtgtttgctcttcttaccggttatcgtgacccccctgctggtgtt 77459 Score = 65.9 bits (33), Expect = 1e-07 Identities = 84/101 (83%) Strand = Plus / Plus Query: 99 ctgcattacaatccctacttccctggtggtgccatagccatgcctaagatgcttatggat 158 ||||| || ||||| || || |||||||| ||||| ||||||||||| ||||||| || Sbjct: 77844 ctgcactataatccttattttcctggtggagccattgccatgcctaaaatgcttaatgac 77903 Query: 159 ggagctattgagtatgaagatggtactcctgcaactgaagc 199 || ||| |||| |||||||||||||| ||||| || ||||| Sbjct: 77904 ggtgctgttgaatatgaagatggtacccctgctaccgaagc 77944 Score = 58.0 bits (29), Expect = 4e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 201 cagatgggcaaggatgtcgtgtcgttcttgtcgtgggcagctgagcctgaaatggaagag 260 |||||||| || ||||| ||||| || ||||| |||||||| || ||||| ||||||||| Sbjct: 106846 cagatggggaaagatgttgtgtcatttttgtcttgggcagcggaacctgagatggaagag 106905 Query: 261 aggaaactg 269 || |||||| Sbjct: 106906 agaaaactg 106914 Score = 58.0 bits (29), Expect = 4e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 201 cagatgggcaaggatgtcgtgtcgttcttgtcgtgggcagctgagcctgaaatggaagag 260 |||||||| || ||||| ||||| || ||||| |||||||| || ||||| ||||||||| Sbjct: 78037 cagatggggaaagatgttgtgtcatttttgtcttgggcagcagaacctgagatggaagag 78096 Query: 261 aggaaactg 269 || |||||| Sbjct: 78097 agaaaactg 78105 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 25 atggccagaactacgtgtttgctcttcttactggttaccatgacccacctgctggtgtt 83 |||| |||||||| ||||||||||| || || ||||| | |||||| |||||||||||| Sbjct: 105953 atggtcagaactatgtgtttgctctcctaaccggttatcgtgacccccctgctggtgtt 106011 Score = 46.1 bits (23), Expect = 0.14 Identities = 62/75 (82%) Strand = Plus / Plus Query: 312 caagccgcatactaccgtcgcatgaggtggtctgtcctcaagtcccgcaagctggtcctg 371 |||||||||||||| ||||| | |||||||||| || ||||| |||||| |||| || Sbjct: 107038 caagccgcatactatcgtcgtcttcggtggtctgttcttaagtctcgcaagttggttctt 107097 Query: 372 gacgtcgtcaactag 386 || || ||||||||| Sbjct: 107098 gatgttgtcaactag 107112
>gb|L41695.1|PS300038E Eucalyptus globulus bicostata symbiont (F00060) mRNA, ESTun038 Length = 330 Score = 93.7 bits (47), Expect = 6e-16 Identities = 152/187 (81%) Strand = Plus / Plus Query: 100 tgcattacaatccctacttccctggtggtgccatagccatgcctaagatgcttatggatg 159 |||| |||||||| || || |||||||| || || || ||||| | |||||||| |||| Sbjct: 47 tgcactacaatccatattttcctggtggagcaattgcaatgccgcaaatgcttattgatg 106 Query: 160 gagctattgagtatgaagatggtactcctgcaactgaagcccagatgggcaaggatgtcg 219 | ||| | |||||||||||||| || || ||||| ||||| |||||||| || ||||||| Sbjct: 107 gtgctgtcgagtatgaagatgggaccccagcaacagaagctcagatggggaaagatgtcg 166 Query: 220 tgtcgttcttgtcgtgggcagctgagcctgaaatggaagagaggaaactgatgggtgtca 279 | | ||||| || ||||| || || |||||||||||||| || || |||||||| ||| Sbjct: 167 taacattcttatcatgggctgcagaacctgaaatggaagaaagaaagctgatgggattca 226 Query: 280 aatggat 286 ||||||| Sbjct: 227 aatggat 233
>dbj|AP000381.1| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone:K17E12 Length = 63604 Score = 73.8 bits (37), Expect = 6e-10 Identities = 97/117 (82%) Strand = Plus / Minus Query: 269 gatgggtgtcaaatggatcttcctactgtcacttgctcttctccaagccgcatactaccg 328 ||||||| |||||||||| |||||||| || || |||||||||||||| || |||||| | Sbjct: 20130 gatgggtttcaaatggatattcctactctctctcgctcttctccaagctgcttactacag 20071 Query: 329 tcgcatgaggtggtctgtcctcaagtcccgcaagctggtcctggacgtcgtcaacta 385 || | | ||||| || |||||||||||||||||||| || ||||| || ||||| Sbjct: 20070 gcgactaaaatggtcggttctcaagtcccgcaagctggttcttgacgtggttaacta 20014 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 225 ttcttgtcgtgggcagctgagcctgaaatggaagagaggaaactg 269 |||||| | ||||||||||| || ||||||||||||||||||||| Sbjct: 20472 ttcttggcctgggcagctgaaccagaaatggaagagaggaaactg 20428 Score = 44.1 bits (22), Expect = 0.53 Identities = 64/78 (82%) Strand = Plus / Minus Query: 105 tacaatccctacttccctggtggtgccatagccatgcctaagatgcttatggatggagct 164 |||||||| || |||||||| || || || || ||||| || ||||| | |||| |||| Sbjct: 20692 tacaatccttatttccctgggggagcaattgctatgccgaaaatgctcaatgatgaagct 20633 Query: 165 attgagtatgaagatggt 182 ||||||||||||||||| Sbjct: 20632 gttgagtatgaagatggt 20615
>gb|S66866.1|S66866 Solanum tuberosum cytochrome c1 precursor, gene, complete cds; mitochondrial gene for mitochondrial product Length = 6007 Score = 61.9 bits (31), Expect = 2e-06 Identities = 67/79 (84%) Strand = Plus / Plus Query: 306 cttctccaagccgcatactaccgtcgcatgaggtggtctgtcctcaagtcccgcaagctg 365 ||||||||||| || |||||||| || |||| |||||||||||||| || |||||| || Sbjct: 5463 cttctccaagcagcttactaccgccgtttgagatggtctgtcctcaaatctcgcaagttg 5522 Query: 366 gtcctggacgtcgtcaact 384 ||||| || || ||||||| Sbjct: 5523 gtccttgatgttgtcaact 5541 Score = 60.0 bits (30), Expect = 9e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 108 aatccctacttccctggtggtgccatagccatgcctaagatgcttatggatggagctatt 167 ||||| |||||||||||||| || ||||| |||||||| ||||||| ||||| || || Sbjct: 4878 aatccttacttccctggtggagctatagcaatgcctaaaatgcttaatgatggtgccgtt 4937 Query: 168 gagtatgaagatgg 181 |||||||| ||||| Sbjct: 4938 gagtatgaggatgg 4951 Score = 46.1 bits (23), Expect = 0.14 Identities = 50/59 (84%) Strand = Plus / Plus Query: 204 atgggcaaggatgtcgtgtcgttcttgtcgtgggcagctgagcctgaaatggaagagag 262 ||||| || ||||| || || |||||||| ||||| |||||||| || ||||||||||| Sbjct: 5058 atgggaaaagatgttgtctcattcttgtcatgggctgctgagccagagatggaagagag 5116 Score = 44.1 bits (22), Expect = 0.53 Identities = 43/50 (86%) Strand = Plus / Plus Query: 33 aactacgtgtttgctcttcttactggttaccatgacccacctgctggtgt 82 ||||| || ||||||||||| ||||| |||| ||||| ||||||||||| Sbjct: 4496 aactatgtttttgctcttctaactggctaccgcgaccctcctgctggtgt 4545
>dbj|AB011477.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MHK7 Length = 78181 Score = 60.0 bits (30), Expect = 9e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 201 cagatgggcaaggatgtcgtgtcgttcttgtcgtgggcagctgagcctgaaatggaagag 260 |||||||| || ||||| || || |||||||| ||||||||||| || || ||||||||| Sbjct: 16113 cagatgggtaaagatgttgtatccttcttgtcctgggcagctgaaccagagatggaagag 16172 Query: 261 aggaaa 266 |||||| Sbjct: 16173 aggaaa 16178 Score = 54.0 bits (27), Expect = 6e-04 Identities = 78/95 (82%) Strand = Plus / Plus Query: 105 tacaatccctacttccctggtggtgccatagccatgcctaagatgcttatggatggagct 164 |||||||| || ||||||||||| || || || ||||| || ||||| | |||| |||| Sbjct: 15897 tacaatccttatttccctggtggagcaatcgctatgccaaaaatgctcaacgatgaagct 15956 Query: 165 attgagtatgaagatggtactcctgcaactgaagc 199 | || ||||||||||| ||||||||||| ||||| Sbjct: 15957 gtggaatatgaagatggaactcctgcaacagaagc 15991
>emb|AJ417788.2|CRE417788 Chlamydomonas reinhardtii mitochondrion cyc1 gene for cytochrome c1 Length = 6404 Score = 48.1 bits (24), Expect = 0.034 Identities = 57/68 (83%) Strand = Plus / Plus Query: 84 cagattcgtgagggtctgcattacaatccctacttccctggtggtgccatagccatgcct 143 ||||| || ||||| ||| | ||||| ||||||||||| || || ||||| |||||||| Sbjct: 4095 cagatccgcgagggcctgtactacaacccctacttcccgggcggcgccatcgccatgccc 4154 Query: 144 aagatgct 151 |||||||| Sbjct: 4155 aagatgct 4162
>gb|AY433126.1| Aedes aegypti ASAP ID: 36451 cytochrome c1 mRNA sequence Length = 528 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 103 attacaatccctacttccctggtggtgccat 133 ||||||||||||||||||| || |||||||| Sbjct: 107 attacaatccctacttcccgggaggtgccat 137
>gb|DQ440286.1| Aedes aegypti clone AET-364 mitochondrial cytochrome c1 mRNA, complete cds; nuclear gene for mitochondrial product Length = 756 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 103 attacaatccctacttccctggtggtgccat 133 ||||||||||||||||||| || |||||||| Sbjct: 470 attacaatccctacttcccgggaggtgccat 500
>gb|AF245393.1|AF245393 Chlamydomonas reinhardtii cytochrome c1 mRNA, complete cds; nuclear gene for mitochondrial product Length = 1809 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Plus Query: 105 tacaatccctacttccctggtggtgccatagccatgcctaagatgct 151 ||||| ||||||||||| || || ||||| |||||||| |||||||| Sbjct: 708 tacaacccctacttcccgggcggcgccatcgccatgcccaagatgct 754
>emb|AL354853.12| Human DNA sequence from clone RP11-555F9 on chromosome 9q22.1-22.33 Contains the 5' end of a novel gene and the 3' end of a novel gene, complete sequence Length = 176422 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 506 tctcttttgttttcttcctctg 527 |||||||||||||||||||||| Sbjct: 83099 tctcttttgttttcttcctctg 83078
>emb|AL844199.8| Mouse DNA sequence from clone RP23-39F22 on chromosome 4, complete sequence Length = 205589 Score = 44.1 bits (22), Expect = 0.53 Identities = 31/34 (91%) Strand = Plus / Plus Query: 240 gctgagcctgaaatggaagagaggaaactgatgg 273 |||||| ||||||||||| |||||||||||||| Sbjct: 36878 gctgagactgaaatggaaatgaggaaactgatgg 36911
>gb|AC137924.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0095K08, complete sequence Length = 180999 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 488 atcataccttgggtacaatct 508 ||||||||||||||||||||| Sbjct: 84537 atcataccttgggtacaatct 84517
>gb|AC123047.3| Mus musculus BAC clone RP24-378B22 from chromosome 7, complete sequence Length = 157795 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 258 gagaggaaactgatgggtgtc 278 ||||||||||||||||||||| Sbjct: 66559 gagaggaaactgatgggtgtc 66539
>emb|BX927158.14| Zebrafish DNA sequence from clone DKEY-106K1 in linkage group 5, complete sequence Length = 144909 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 476 tggttgtctcccatcataccttggg 500 |||| |||||||||||||||||||| Sbjct: 34603 tggtggtctcccatcataccttggg 34579
>gb|AE014823.1| Plasmodium falciparum 3D7 chromosome 14 section 8 of 13 of the complete sequence Length = 249943 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 505 atctcttttgttttcttcctc 525 ||||||||||||||||||||| Sbjct: 186991 atctcttttgttttcttcctc 186971
>emb|BX067366.1|CNS09O56 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC51AB05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 810 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 93 gagggtctgcattacaatccctacttccctggtggtgccat 133 ||||||| | ||||||| || |||||||| ||||||||||| Sbjct: 750 gagggtcagtattacaacccgtacttccccggtggtgccat 790
>emb|BX065413.1|CNS09MMX Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC49BC02 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 930 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 93 gagggtctgcattacaatccctacttccctggtggtgccat 133 ||||||| | ||||||| || |||||||| ||||||||||| Sbjct: 740 gagggtcagtattacaacccgtacttccccggtggtgccat 780
>emb|BX059655.1|CNS09I6Z Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC4CE01 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 934 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Minus Query: 93 gagggtctgcattacaatccctacttccctggtggtgccat 133 ||||||| | ||||||| || |||||||| ||||||||||| Sbjct: 615 gagggtcagtattacaacccgtacttccccggtggtgccat 575
>emb|BX058738.1|CNS09HHI Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC39BB12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 977 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Minus Query: 93 gagggtctgcattacaatccctacttccctggtggtgccat 133 ||||||| | ||||||| || |||||||| ||||||||||| Sbjct: 644 gagggtcagtattacaacccgtacttccccggtggtgccat 604
>emb|BX058737.1|CNS09HHH Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC39BB12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 975 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 93 gagggtctgcattacaatccctacttccctggtggtgccat 133 ||||||| | ||||||| || |||||||| ||||||||||| Sbjct: 733 gagggtcagtattacaacccgtacttccccggtggtgccat 773
>emb|BX033568.1|CNS08Y2C Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA5AD11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 991 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Minus Query: 93 gagggtctgcattacaatccctacttccctggtggtgccat 133 ||||||| | ||||||| || |||||||| ||||||||||| Sbjct: 988 gagggtcagtattacaacccgtacttccccggtggtgccat 948
>emb|BX028780.1|CNS08UDC Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA42DH08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 520 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Minus Query: 93 gagggtctgcattacaatccctacttccctggtggtgccat 133 ||||||| | ||||||| || |||||||| ||||||||||| Sbjct: 233 gagggtcagtattacaacccgtacttccccggtggtgccat 193
>emb|BX028779.1|CNS08UDB Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA42DH08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1046 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 93 gagggtctgcattacaatccctacttccctggtggtgccat 133 ||||||| | ||||||| || |||||||| ||||||||||| Sbjct: 643 gagggtcagtattacaacccgtacttccccggtggtgccat 683
>emb|BX027537.1|CNS08TET Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA41AH05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 830 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Minus Query: 93 gagggtctgcattacaatccctacttccctggtggtgccat 133 ||||||| | ||||||| || |||||||| ||||||||||| Sbjct: 738 gagggtcagtattacaacccgtacttccccggtggtgccat 698
>emb|BX027536.1|CNS08TES Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA41AH05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 592 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 93 gagggtctgcattacaatccctacttccctggtggtgccat 133 ||||||| | ||||||| || |||||||| ||||||||||| Sbjct: 322 gagggtcagtattacaacccgtacttccccggtggtgccat 362
>emb|BX014168.1|CNS08J3G Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA21BA07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 778 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Minus Query: 93 gagggtctgcattacaatccctacttccctggtggtgccat 133 ||||||| | ||||||| || |||||||| ||||||||||| Sbjct: 725 gagggtcagtattacaacccgtacttccccggtggtgccat 685
>emb|BX014167.1|CNS08J3F Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA21BA07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 906 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 93 gagggtctgcattacaatccctacttccctggtggtgccat 133 ||||||| | ||||||| || |||||||| ||||||||||| Sbjct: 300 gagggtcagtattacaacccgtacttccccggtggtgccat 340
>emb|BX011244.1|CNS08GU8 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA17DH03 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 928 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 93 gagggtctgcattacaatccctacttccctggtggtgccat 133 ||||||| | ||||||| || |||||||| ||||||||||| Sbjct: 372 gagggtcagtattacaacccgtacttccccggtggtgccat 412
>emb|AL590503.11| Mouse DNA sequence from clone RP23-128M23 on chromosome 13, complete sequence Length = 169547 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 277 tcaaatggatcttcctactgt 297 ||||||||||||||||||||| Sbjct: 112358 tcaaatggatcttcctactgt 112378
>gb|AC021549.9| Homo sapiens chromosome 18, clone RP11-650P15, complete sequence Length = 183066 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 247 ctgaaatggaagagaggaaac 267 ||||||||||||||||||||| Sbjct: 103592 ctgaaatggaagagaggaaac 103612
>gb|CP000236.1| Ehrlichia chaffeensis str. Arkansas, complete genome Length = 1176248 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 233 gtgggcagctgagcctgaaatggaa 257 |||||||||||||||||| |||||| Sbjct: 522260 gtgggcagctgagcctgagatggaa 522284
>gb|AC151841.5| Mus musculus BAC clone RP23-128P10 from chromosome 7, complete sequence Length = 212484 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 258 gagaggaaactgatgggtgtc 278 ||||||||||||||||||||| Sbjct: 15264 gagaggaaactgatgggtgtc 15284
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 488 atcataccttgggtacaatct 508 ||||||||||||||||||||| Sbjct: 7913411 atcataccttgggtacaatct 7913431
>gb|AY177663.1| Homo sapiens desmoglein 4 preproprotein (DSG4) gene, complete cds Length = 37140 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 247 ctgaaatggaagagaggaaac 267 ||||||||||||||||||||| Sbjct: 29300 ctgaaatggaagagaggaaac 29280
>dbj|AP003337.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1111_G12 Length = 112664 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 488 atcataccttgggtacaatct 508 ||||||||||||||||||||| Sbjct: 32942 atcataccttgggtacaatct 32922
>dbj|AP003331.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1088D01 Length = 146144 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 488 atcataccttgggtacaatct 508 ||||||||||||||||||||| Sbjct: 128747 atcataccttgggtacaatct 128727
>ref|XM_308821.2| Anopheles gambiae str. PEST ENSANGP00000021712 (ENSANGG00000019223), partial mRNA Length = 795 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 93 gagggtctgcattacaatccctacttccctggtggtgccat 133 ||||||| | ||||||| || |||||||| ||||||||||| Sbjct: 499 gagggtcagtattacaacccgtacttccccggtggtgccat 539
>dbj|AP003499.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-178H8, complete sequence Length = 193227 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 390 ccattgtttcttctttctatt 410 ||||||||||||||||||||| Sbjct: 31087 ccattgtttcttctttctatt 31107
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 488 atcataccttgggtacaatct 508 ||||||||||||||||||||| Sbjct: 7983498 atcataccttgggtacaatct 7983518
>emb|AL773525.5| Mouse DNA sequence from clone RP23-169L4 on chromosome 2, complete sequence Length = 188772 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 241 ctgagcctgaaatggaagagaggaa 265 ||||||||||||||| ||||||||| Sbjct: 154647 ctgagcctgaaatgggagagaggaa 154671
>gb|AY439902.1| Armigeres subalbatus ASAP ID: 38945 cytochrome C1 mRNA sequence Length = 1114 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 103 attacaatccctacttccctggtggtgc 130 ||||||||||||||||||| || ||||| Sbjct: 700 attacaatccctacttcccaggaggtgc 727
>gb|AE017197.1| Rickettsia typhi str. Wilmington complete genome Length = 1111496 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 234 tgggcagctgagcctgaaatggaa 257 |||||||||||||| ||||||||| Sbjct: 332057 tgggcagctgagccggaaatggaa 332080
>gb|AC137511.3| Mus musculus BAC clone RP24-313I8 from chromosome 5, complete sequence Length = 168197 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 253 tggaagagaggaaactgatgggtg 276 ||||||||||||||||||| |||| Sbjct: 123518 tggaagagaggaaactgatcggtg 123541
>gb|AC119158.10| Mus musculus chromosome 19, clone RP23-434C14, complete sequence Length = 209459 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 506 tctcttttgttttcttcctctgct 529 ||||||| |||||||||||||||| Sbjct: 187567 tctctttagttttcttcctctgct 187590
>gb|CP000053.1| Rickettsia felis URRWXCal2, complete genome Length = 1485148 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 234 tgggcagctgagcctgaaatggaa 257 |||||||||||||| ||||||||| Sbjct: 1068537 tgggcagctgagccagaaatggaa 1068514
>emb|AL365444.11| Human DNA sequence from clone RP11-115P16 on chromosome 1 Contains the 3' UTR of a novel gene (DKFZp761P211), the ITPKB gene for inositol 1,4,5-trisphosphate 3-kinase B, two novel genes, a ribosomal protein S27 (metallopanstimulin 1) (RPS27) pseudogene and a CpG island, complete sequence Length = 181144 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 338 gtggtctgtcctcaagtccc 357 |||||||||||||||||||| Sbjct: 144686 gtggtctgtcctcaagtccc 144667
>ref|XM_786458.1| PREDICTED: Strongylocentrotus purpuratus similar to cytochrome c-1 (LOC586686), mRNA Length = 1373 Score = 40.1 bits (20), Expect = 8.3 Identities = 44/52 (84%) Strand = Plus / Plus Query: 31 agaactacgtgtttgctcttcttactggttaccatgacccacctgctggtgt 82 |||||||| | ||||||||||| ||||| ||| ||| || ||||||||||| Sbjct: 101 agaactacatctttgctcttctgactggatactgtgaacctcctgctggtgt 152
>emb|AL133475.14| Human DNA sequence from clone RP3-357D13 on chromosome 6 Contains the 5' end of the ELOVL4 gene for elongation of very long chain fatty acids (FEN1/ELo2, SUR4/ELo3, yeast)-like 4, a GAPD (glyceraldehyde-3-phosphate dehydrogenase) pseudogene, an RPL35A (60S ribosomal protein L35A) pseudogene, the TTK gene for TTK protein kinase and a putative CpG island, complete sequence Length = 119318 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 458 ttgtatattttgctactctg 477 |||||||||||||||||||| Sbjct: 52518 ttgtatattttgctactctg 52499
>ref|XM_961529.1| PREDICTED: Tribolium castaneum similar to CG9924-PC, isoform C (LOC655033), mRNA Length = 1563 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 tgaaatggaagagaggaaac 267 |||||||||||||||||||| Sbjct: 918 tgaaatggaagagaggaaac 937
>gb|AC145218.29| Medicago truncatula clone mth2-34l18, complete sequence Length = 134519 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 397 ttcttctttctattgcaaca 416 |||||||||||||||||||| Sbjct: 18098 ttcttctttctattgcaaca 18079
>gb|AC109821.5| Homo sapiens BAC clone RP11-509D19 from 4, complete sequence Length = 106123 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 473 ctctggttgtctcccatcat 492 |||||||||||||||||||| Sbjct: 20747 ctctggttgtctcccatcat 20728
>gb|AC095053.3| Homo sapiens BAC clone RP11-352E8 from 4, complete sequence Length = 112123 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 ctgcaactgaagcccagatg 206 |||||||||||||||||||| Sbjct: 20691 ctgcaactgaagcccagatg 20710
>gb|CP000235.1| Anaplasma phagocytophilum HZ, complete genome Length = 1471282 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 233 gtgggcagctgagcctgaaatgga 256 |||||| ||||||||||||||||| Sbjct: 416142 gtgggctgctgagcctgaaatgga 416165
>gb|AC008147.31| Homo sapiens 12 BAC RP3-405J10 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 115345 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 386 gtgaccattgtttcttcttt 405 |||||||||||||||||||| Sbjct: 43413 gtgaccattgtttcttcttt 43432
>dbj|AK024933.1| Homo sapiens cDNA: FLJ21280 fis, clone COL01884 Length = 2604 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 386 gtgaccattgtttcttcttt 405 |||||||||||||||||||| Sbjct: 2197 gtgaccattgtttcttcttt 2178
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 agtgaccattgtttcttctt 404 |||||||||||||||||||| Sbjct: 3750921 agtgaccattgtttcttctt 3750940
>emb|AL133168.6|CNS01DU7 Human chromosome 14 DNA sequence BAC R-187K17 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 195115 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 508 tcttttgttttcttcctctg 527 |||||||||||||||||||| Sbjct: 52220 tcttttgttttcttcctctg 52201
>emb|AL669851.8| Mouse DNA sequence from clone RP23-18K13 on chromosome X, complete sequence Length = 204557 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 507 ctcttttgttttcttcctct 526 |||||||||||||||||||| Sbjct: 22494 ctcttttgttttcttcctct 22475 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,992,970 Number of Sequences: 3902068 Number of extensions: 5992970 Number of successful extensions: 124836 Number of sequences better than 10.0: 88 Number of HSP's better than 10.0 without gapping: 89 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 124445 Number of HSP's gapped (non-prelim): 381 length of query: 613 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 590 effective length of database: 17,143,297,704 effective search space: 10114545645360 effective search space used: 10114545645360 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
