ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags13i20
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1GT3_ARATH (Q9LF80) Putative glycosyltransferase 3 (EC 2.4.-.-) (... 209 3e-54
2GT4_ARATH (Q9M9U0) Putative glycosyltransferase 4 (EC 2.4.-.-) (... 209 6e-54
3GT5_ARATH (Q9CA75) Putative glycosyltransferase 5 (EC 2.4.-.-) (... 204 1e-52
4GT2_ARATH (O22775) Putative glycosyltransferase 2 (EC 2.4.-.-) (... 184 1e-46
5XT1_ARATH (Q9LZJ3) Xyloglucan 6-xylosyltransferase (EC 2.4.2.39)... 179 6e-45
6GT6_ARATH (Q9SZG1) Putative glycosyltransferase 6 (EC 2.4.-.-) (... 77 3e-14
7GT7_ARATH (O81007) Putative glycosyltransferase 7 (EC 2.4.-.-) (... 75 1e-13
8AMHR2_HUMAN (Q16671) Anti-Muellerian hormone type-2 receptor pre... 32 0.93
9SAV_DROME (Q9VCR6) Scaffold protein salvador (Shar-pei) 32 1.6
10CDSN_MACMU (Q5TM45) Corneodesmosin precursor 31 2.7
11YHR8_SCHPO (Q8WZK2) Protein C839.08c in chromosome II precursor 31 2.7
12EMB_HUMAN (Q6PCB8) Embigin precursor 30 3.5

>GT3_ARATH (Q9LF80) Putative glycosyltransferase 3 (EC 2.4.-.-) (AtGT3)|
          Length = 457

 Score =  209 bits (533), Expect = 3e-54
 Identities = 90/121 (74%), Positives = 104/121 (85%)
 Frame = +3

Query: 12  KEKWMDKVYIENSYYLHGFWAGLVDKYEEMMENHHPGLGDERWPFVTHFVGCKPCGSYGD 191
           KE WM+KV++EN YYLHGFW GLVDKYEEMME +HPGLGDERWPF+THFVGCKPCGSY D
Sbjct: 330 KETWMEKVFVENQYYLHGFWEGLVDKYEEMMEKYHPGLGDERWPFITHFVGCKPCGSYAD 389

Query: 192 YPVDRCLKSMERAFNFADNQVLRLYGFAHKGLESPKIKRIRSQTTKPINDKENLDVKAKM 371
           Y V+RCLKSMERAFNFADNQVL+LYGF H+GL SPKIKRIR++TT P+   +  D++   
Sbjct: 390 YAVERCLKSMERAFNFADNQVLKLYGFGHRGLLSPKIKRIRNETTFPLKFVDRFDIRRTT 449

Query: 372 P 374
           P
Sbjct: 450 P 450



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>GT4_ARATH (Q9M9U0) Putative glycosyltransferase 4 (EC 2.4.-.-) (AtGT4)|
          Length = 513

 Score =  209 bits (531), Expect = 6e-54
 Identities = 88/117 (75%), Positives = 103/117 (88%)
 Frame = +3

Query: 12  KEKWMDKVYIENSYYLHGFWAGLVDKYEEMMENHHPGLGDERWPFVTHFVGCKPCGSYGD 191
           KEKW++KVY+EN YYLHGFW GLVD+YEEM+E +HPGLGDERWPFVTHFVGCKPCGSY D
Sbjct: 389 KEKWIEKVYVENQYYLHGFWEGLVDRYEEMIEKYHPGLGDERWPFVTHFVGCKPCGSYAD 448

Query: 192 YPVDRCLKSMERAFNFADNQVLRLYGFAHKGLESPKIKRIRSQTTKPINDKENLDVK 362
           Y VDRC KSMERAFNFADNQVL+LYGF+H+GL SPKIKRIR++T  P+   +  D++
Sbjct: 449 YAVDRCFKSMERAFNFADNQVLKLYGFSHRGLLSPKIKRIRNETVSPLESVDKFDIR 505



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>GT5_ARATH (Q9CA75) Putative glycosyltransferase 5 (EC 2.4.-.-) (AtGT5)|
          Length = 457

 Score =  204 bits (519), Expect = 1e-52
 Identities = 86/117 (73%), Positives = 103/117 (88%)
 Frame = +3

Query: 12  KEKWMDKVYIENSYYLHGFWAGLVDKYEEMMENHHPGLGDERWPFVTHFVGCKPCGSYGD 191
           K+ WM+KV++EN YYLHGFW GLVD+YEEM+E +HPGLGDERWPFVTHFVGCKPCGSY D
Sbjct: 331 KDTWMEKVFVENQYYLHGFWEGLVDRYEEMIEKYHPGLGDERWPFVTHFVGCKPCGSYAD 390

Query: 192 YPVDRCLKSMERAFNFADNQVLRLYGFAHKGLESPKIKRIRSQTTKPINDKENLDVK 362
           Y V+RCLKSMERAFNFADNQVL+LYGF+H+GL SPKIKRIR++T  P+   +  D++
Sbjct: 391 YAVERCLKSMERAFNFADNQVLKLYGFSHRGLLSPKIKRIRNETVSPLEFVDKFDIR 447



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>GT2_ARATH (O22775) Putative glycosyltransferase 2 (EC 2.4.-.-) (AtGT2)|
          Length = 461

 Score =  184 bits (467), Expect = 1e-46
 Identities = 74/114 (64%), Positives = 96/114 (84%)
 Frame = +3

Query: 12  KEKWMDKVYIENSYYLHGFWAGLVDKYEEMMENHHPGLGDERWPFVTHFVGCKPCGSYGD 191
           ++ W +KVY+E+ YYLHG+W  LVD+YEEM+EN+HPGLGD RWP VTHFVGCKPCG +GD
Sbjct: 331 RDAWGNKVYLESGYYLHGYWGILVDRYEEMIENYHPGLGDHRWPLVTHFVGCKPCGKFGD 390

Query: 192 YPVDRCLKSMERAFNFADNQVLRLYGFAHKGLESPKIKRIRSQTTKPINDKENL 353
           YPV+RCLK M+RAFNF DNQ+L++YGF HK L S K+KR+R++T+ P+  K+ L
Sbjct: 391 YPVERCLKQMDRAFNFGDNQILQIYGFTHKSLASRKVKRVRNETSNPLEMKDEL 444



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>XT1_ARATH (Q9LZJ3) Xyloglucan 6-xylosyltransferase (EC 2.4.2.39) (AtXT1)|
          Length = 460

 Score =  179 bits (453), Expect = 6e-45
 Identities = 76/130 (58%), Positives = 99/130 (76%), Gaps = 6/130 (4%)
 Frame = +3

Query: 12  KEKWMDKVYIENSYYLHGFWAGLVDKYEEMMENHHPGLGDERWPFVTHFVGCKPCGSYGD 191
           +EKW  KVY+E+ YYLHG+W  LVD+YEEM+ENH PG GD RWP VTHFVGCKPCG +GD
Sbjct: 330 REKWGGKVYLESGYYLHGYWGILVDRYEEMIENHKPGFGDHRWPLVTHFVGCKPCGKFGD 389

Query: 192 YPVDRCLKSMERAFNFADNQVLRLYGFAHKGLESPKIKRIRSQTTKPINDKENLDV---- 359
           YPV+RCL+ M+RAFNF DNQ+L++YGF HK L S ++K  R+QT +P++ K+   +    
Sbjct: 390 YPVERCLRQMDRAFNFGDNQILQMYGFTHKSLGSRRVKPTRNQTDRPLDAKDEFGLLHPP 449

Query: 360 --KAKMPTTS 383
              AK+ TT+
Sbjct: 450 FKAAKLSTTT 459



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>GT6_ARATH (Q9SZG1) Putative glycosyltransferase 6 (EC 2.4.-.-) (AtGT6)|
          Length = 432

 Score = 77.0 bits (188), Expect = 3e-14
 Identities = 45/132 (34%), Positives = 60/132 (45%), Gaps = 38/132 (28%)
 Frame = +3

Query: 6   RXKEKWMDKVYIENSYYLHGFWAGL-------VDKYEEM--------------------- 101
           + KE +  K+Y+E  YYL G+W G+        ++Y EM                     
Sbjct: 285 KHKELYYPKIYLEAEYYLQGYWIGVFGDFANVTERYLEMEREDDTLRRRHAEKVSERYGA 344

Query: 102 ------MENHHPGLGDERWPFVTHFVGCKPCGSYGD----YPVDRCLKSMERAFNFADNQ 251
                 ++    G G  R  F+THF GC+PC   GD    Y  D C   M RA NFADNQ
Sbjct: 345 FREERFLKGEFGGRGSRRRAFITHFTGCQPCS--GDHNPSYDGDTCWNEMIRALNFADNQ 402

Query: 252 VLRLYGFAHKGL 287
           V+R+YG+ H  L
Sbjct: 403 VMRVYGYVHSDL 414



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>GT7_ARATH (O81007) Putative glycosyltransferase 7 (EC 2.4.-.-) (AtGT7)|
          Length = 449

 Score = 75.5 bits (184), Expect = 1e-13
 Identities = 44/132 (33%), Positives = 60/132 (45%), Gaps = 38/132 (28%)
 Frame = +3

Query: 6   RXKEKWMDKVYIENSYYLHGFWAGLV-------DKYEEM--------------------- 101
           + +E +  K+Y+E  +Y  G+W  +V       ++Y EM                     
Sbjct: 302 KHREVYYPKIYLEGDFYFEGYWLEIVPGLSNVTERYLEMEREDATLRRRHAEKVSERYAA 361

Query: 102 ------MENHHPGLGDERWPFVTHFVGCKPCGSYGD----YPVDRCLKSMERAFNFADNQ 251
                 ++    G G +R PFVTHF GC+PC   GD    Y  D C   M +A NFADNQ
Sbjct: 362 FREERFLKGERGGKGSKRRPFVTHFTGCQPCS--GDHNKMYDGDTCWNGMIKAINFADNQ 419

Query: 252 VLRLYGFAHKGL 287
           V+R YGF H  L
Sbjct: 420 VMRKYGFVHSDL 431



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>AMHR2_HUMAN (Q16671) Anti-Muellerian hormone type-2 receptor precursor (EC|
           2.7.11.30) (Anti-Muellerian hormone type II receptor)
           (AMH type II receptor) (MIS type II receptor) (MISRII)
           (MRII)
          Length = 573

 Score = 32.3 bits (72), Expect = 0.93
 Identities = 18/54 (33%), Positives = 23/54 (42%)
 Frame = -1

Query: 168 CTRQSVSQMATAHPQALDGGSPSSPRTCPPIQPRNHASSMNSLYTPCPSTSPXC 7
           C +Q ++  A AHPQ       S PR CPP+ P +  S       PC      C
Sbjct: 500 CVQQRLA--ALAHPQESHPFPESCPRGCPPLCPEDCTSIPAPTILPCRPQRSAC 551



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>SAV_DROME (Q9VCR6) Scaffold protein salvador (Shar-pei)|
          Length = 608

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 19/60 (31%), Positives = 30/60 (50%)
 Frame = -1

Query: 219 YS*DTGQLDNHHSFRMACTRQSVSQMATAHPQALDGGSPSSPRTCPPIQPRNHASSMNSL 40
           YS    Q D +H+ R A ++  + Q + +HP +L   S    R+ PP+ P    +S N L
Sbjct: 83  YSCTDSQPDYYHA-RRAQSQMPLQQHSHSHPHSLPHPSHPHVRSHPPLPPHQFRASSNQL 141



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>CDSN_MACMU (Q5TM45) Corneodesmosin precursor|
          Length = 534

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 19/48 (39%), Positives = 21/48 (43%), Gaps = 5/48 (10%)
 Frame = -1

Query: 144 MATAHPQALDGGSPSSPRTCPPIQPRNH-----ASSMNSLYTPCPSTS 16
           + T   Q   GGS  S   C P   R H     +SS  S Y PC STS
Sbjct: 377 VGTGGVQLCGGGSTGSKGPCSPFSSRVHSSSSISSSSGSPYHPCGSTS 424



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>YHR8_SCHPO (Q8WZK2) Protein C839.08c in chromosome II precursor|
          Length = 935

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 20/56 (35%), Positives = 26/56 (46%)
 Frame = +3

Query: 36  YIENSYYLHGFWAGLVDKYEEMMENHHPGLGDERWPFVTHFVGCKPCGSYGDYPVD 203
           Y+EN  Y+ G    LVDK    M N++   G   W F     G    GS+GD  +D
Sbjct: 233 YVENIQYIDGKIQELVDK----MNNYYNNDGASSWVFTADH-GMSDFGSHGDGNLD 283



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>EMB_HUMAN (Q6PCB8) Embigin precursor|
          Length = 327

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = -1

Query: 144 MATAHPQALDGGSPSSPRTCPPIQPRNHASSMN 46
           +A A P + DG +P SP T PP++    A++ +
Sbjct: 24  LAAARPSSADGSAPDSPFTSPPLREEIMANNFS 56


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 82,041,416
Number of Sequences: 219361
Number of extensions: 1747856
Number of successful extensions: 5078
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 4835
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5067
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4545742239
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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