ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags13i03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 84 2e-13
2gb|AC118668.2| Genomic sequence for Oryza sativa, Nipponbare str... 84 2e-13
3gb|AF395880.1| Oryza sativa JIOsPR10 mRNA, complete cds 84 2e-13
4gb|AF416604.1|AF416604 Oryza sativa pathogen-related protein gen... 84 2e-13
5dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 84 2e-13
6dbj|AK121376.1| Oryza sativa (japonica cultivar-group) cDNA clon... 84 2e-13
7gb|AY751554.1| Sorghum bicolor pathogenesis-related protein 10b ... 58 1e-05
8gb|AY751551.1| Sorghum bicolor pathogenesis-related protein 10a ... 52 6e-04
9gb|AY751553.1| Sorghum bicolor pathogenesis-related protein 10d ... 50 0.002
10gb|AY953127.1| Zea mays pathogenesis-related protein 10 gene, co... 48 0.010
11gb|AY103811.1| Zea mays PCO091453 mRNA sequence 48 0.010
12gb|U60764.1|SBU60764 Sorghum bicolor pathogenesis-related protei... 46 0.039
13gb|AY751552.1| Sorghum bicolor pathogenesis-related protein 10c ... 40 2.4
14gb|AY714813.1| Cercopithecine herpesvirus 2, complete genome 38 9.4
15gb|AC140005.2| Oryza sativa (japonica cultivar-group) chromosome... 38 9.4
16ref|XM_471326.1| Oryza sativa (japonica cultivar-group), predic... 38 9.4
17gb|DP000016.1| Pan troglodytes target 1 genomic scaffold 38 9.4
18gb|AC147895.2| Xenopus tropicalis clone CH216-3D8, complete sequ... 38 9.4
19gb|AC087264.3| Pan troglodytes clone RP43-150N19, complete sequence 38 9.4
20gb|AC145494.3| Gorilla gorilla gorilla clone CH255-100P16, compl... 38 9.4
21gb|AC004416.1| Homo sapiens BAC clone CTB-13N12 from 7, complete... 38 9.4
22gb|AC175615.3| Nomascus leucogenys leucogenys clone CH271-480C7,... 38 9.4
23emb|Z92546.2|HS65A6 Human DNA sequence from clone CTA-65A6 on ch... 38 9.4
24gb|AC099399.2| Oryza sativa (japonica cultivar-group) chromosome... 38 9.4
25emb|AL607007.3|OSJN00118 Oryza sativa genomic DNA, chromosome 4,... 38 9.4
26gb|AC027449.6| Homo sapiens chromosome 18, clone RP11-535A5, com... 38 9.4
27gb|AY118428.1| Drosophila melanogaster RH14816 full insert cDNA 38 9.4
28gb|AC093572.18| Pan troglodytes clone rp43-25g23, complete sequence 38 9.4
29ref|NM_001014526.1| Drosophila melanogaster CG33528-PE, isoform ... 38 9.4
30ref|NM_137036.2| Drosophila melanogaster CG13330-RA (CG13330), mRNA 38 9.4
31gb|AY069728.1| Drosophila melanogaster LP03146 full length cDNA 38 9.4
32gb|AC091634.1|AC091634 Drosophila melanogaster, chromosome 2R, r... 38 9.4
33dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 38 9.4
34dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 38 9.4
35gb|DP000025.1| Gorilla gorilla gorilla target 1 genomic scaffold 38 9.4
36gb|AC138089.2| Homo sapiens chromosome 1 clone RP11-407H12, comp... 38 9.4
37dbj|AP005681.3| Oryza sativa (japonica cultivar-group) genomic D... 38 9.4
38emb|X56935.1|HVSA8GB Herpesvirus SA8 gene for glycoprotein B 38 9.4
39gb|AC007452.1|AC007452 Drosophila melanogaster, chromosome 2R, r... 38 9.4
40gb|AE003818.3| Drosophila melanogaster chromosome 2R, section 32... 38 9.4
41gb|M57388.1|HSVGBQ Simian herpesvirus SA8 virion envelope glycop... 38 9.4
42gb|U14662.1|BHU14662 Baboon herpesvirus HVP2 gB glycoprotein (UL... 38 9.4
43gb|L08106.1|BMOGLYTRSY Silk moth glycyl-tRNA synthetase gene, co... 38 9.4
44dbj|AP000353.2| Homo sapiens genomic DNA, chromosome 22q11.2, IG... 38 9.4 
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 83.8 bits (42), Expect = 2e-13
 Identities = 113/137 (82%)
 Strand = Plus / Plus

                                                                            
Query: 36       gcaatggcctccaccaacagttggacccatgagattgagtcgtcggnctctgcatcgcgc 95
                |||||||| ||||||||||| |||||||| ||||| |||||| |||   | ||  |||||
Sbjct: 10534306 gcaatggcatccaccaacagctggacccacgagatcgagtcgccggtggccgcgccgcgc 10534365

                                                                            
Query: 96       atcttccgtgccggtgtcatggactggcacaccctggcccccaagctcgcgccacagatc 155
                 | ||||| ||||  |||||||||||||||||||| ||||||||| ||||  | || |||
Sbjct: 10534366 ctgttccgcgccgccgtcatggactggcacacccttgcccccaagatcgcctcccacatc 10534425

                                 
Query: 156      atcaccagcgcccaccc 172
                 || |||||||||||||
Sbjct: 10534426 gtcgccagcgcccaccc 10534442



 Score = 38.2 bits (19), Expect = 9.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 28      gacaagaagcaatggcctc 46
               |||||||||||||||||||
Sbjct: 1880054 gacaagaagcaatggcctc 1880036
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>gb|AC118668.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0036G02, from chromosome 3, complete sequence
          Length = 153308

 Score = 83.8 bits (42), Expect = 2e-13
 Identities = 113/137 (82%)
 Strand = Plus / Plus

                                                                         
Query: 36    gcaatggcctccaccaacagttggacccatgagattgagtcgtcggnctctgcatcgcgc 95
             |||||||| ||||||||||| |||||||| ||||| |||||| |||   | ||  |||||
Sbjct: 90119 gcaatggcatccaccaacagctggacccacgagatcgagtcgccggtggccgcgccgcgc 90178

                                                                         
Query: 96    atcttccgtgccggtgtcatggactggcacaccctggcccccaagctcgcgccacagatc 155
              | ||||| ||||  |||||||||||||||||||| ||||||||| ||||  | || |||
Sbjct: 90179 ctgttccgcgccgccgtcatggactggcacacccttgcccccaagatcgcctcccacatc 90238

                              
Query: 156   atcaccagcgcccaccc 172
              || |||||||||||||
Sbjct: 90239 gtcgccagcgcccaccc 90255
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>gb|AF395880.1| Oryza sativa JIOsPR10 mRNA, complete cds
          Length = 822

 Score = 83.8 bits (42), Expect = 2e-13
 Identities = 113/137 (82%)
 Strand = Plus / Plus

                                                                       
Query: 36  gcaatggcctccaccaacagttggacccatgagattgagtcgtcggnctctgcatcgcgc 95
           |||||||| ||||||||||| |||||||| ||||| |||||| |||   | ||  |||||
Sbjct: 58  gcaatggcatccaccaacagctggacccacgagatcgagtcgccggtggccgcgccgcgc 117

                                                                       
Query: 96  atcttccgtgccggtgtcatggactggcacaccctggcccccaagctcgcgccacagatc 155
            | ||||| ||||  |||||||||||||||||||| ||||||||| ||||  | || |||
Sbjct: 118 ctgttccgcgccgccgtcatggactggcacacccttgcccccaagatcgcctcccacatc 177

                            
Query: 156 atcaccagcgcccaccc 172
            || |||||||||||||
Sbjct: 178 gtcgccagcgcccaccc 194
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>gb|AF416604.1|AF416604 Oryza sativa pathogen-related protein gene, complete cds
          Length = 848

 Score = 83.8 bits (42), Expect = 2e-13
 Identities = 113/137 (82%)
 Strand = Plus / Plus

                                                                       
Query: 36  gcaatggcctccaccaacagttggacccatgagattgagtcgtcggnctctgcatcgcgc 95
           |||||||| ||||||||||| |||||||| ||||| |||||| |||   | ||  |||||
Sbjct: 71  gcaatggcatccaccaacagctggacccacgagatcgagtcgccggtggccgcgccgcgc 130

                                                                       
Query: 96  atcttccgtgccggtgtcatggactggcacaccctggcccccaagctcgcgccacagatc 155
            | ||||| ||||  |||||||||||||||||||| ||||||||| ||||  | || |||
Sbjct: 131 ctgttccgcgccgccgtcatggactggcacacccttgcccccaagatcgcctcccacatc 190

                            
Query: 156 atcaccagcgcccaccc 172
            || |||||||||||||
Sbjct: 191 gtcgccagcgcccaccc 207
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 83.8 bits (42), Expect = 2e-13
 Identities = 113/137 (82%)
 Strand = Plus / Plus

                                                                            
Query: 36       gcaatggcctccaccaacagttggacccatgagattgagtcgtcggnctctgcatcgcgc 95
                |||||||| ||||||||||| |||||||| ||||| |||||| |||   | ||  |||||
Sbjct: 10532407 gcaatggcatccaccaacagctggacccacgagatcgagtcgccggtggccgcgccgcgc 10532466

                                                                            
Query: 96       atcttccgtgccggtgtcatggactggcacaccctggcccccaagctcgcgccacagatc 155
                 | ||||| ||||  |||||||||||||||||||| ||||||||| ||||  | || |||
Sbjct: 10532467 ctgttccgcgccgccgtcatggactggcacacccttgcccccaagatcgcctcccacatc 10532526

                                 
Query: 156      atcaccagcgcccaccc 172
                 || |||||||||||||
Sbjct: 10532527 gtcgccagcgcccaccc 10532543



 Score = 38.2 bits (19), Expect = 9.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 28      gacaagaagcaatggcctc 46
               |||||||||||||||||||
Sbjct: 1880052 gacaagaagcaatggcctc 1880034
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>dbj|AK121376.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023127E15, full
           insert sequence
          Length = 882

 Score = 83.8 bits (42), Expect = 2e-13
 Identities = 113/137 (82%)
 Strand = Plus / Plus

                                                                       
Query: 36  gcaatggcctccaccaacagttggacccatgagattgagtcgtcggnctctgcatcgcgc 95
           |||||||| ||||||||||| |||||||| ||||| |||||| |||   | ||  |||||
Sbjct: 92  gcaatggcatccaccaacagctggacccacgagatcgagtcgccggtggccgcgccgcgc 151

                                                                       
Query: 96  atcttccgtgccggtgtcatggactggcacaccctggcccccaagctcgcgccacagatc 155
            | ||||| ||||  |||||||||||||||||||| ||||||||| ||||  | || |||
Sbjct: 152 ctgttccgcgccgccgtcatggactggcacacccttgcccccaagatcgcctcccacatc 211

                            
Query: 156 atcaccagcgcccaccc 172
            || |||||||||||||
Sbjct: 212 gtcgccagcgcccaccc 228
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>gb|AY751554.1| Sorghum bicolor pathogenesis-related protein 10b (PR10) gene,
            complete cds
          Length = 2438

 Score = 58.0 bits (29), Expect = 1e-05
 Identities = 88/108 (81%)
 Strand = Plus / Plus

                                                                        
Query: 33   gaagcaatggcctccaccaacagttggacccatgagattgagtcgtcggnctctgcatcg 92
            ||||||||||||||| ||||||| |||||||  |||||    ||| |||   ||||  ||
Sbjct: 1856 gaagcaatggcctccgccaacagctggaccctcgagatcccttcgccggtggctgcgccg 1915

                                                            
Query: 93   cgcatcttccgtgccggtgtcatggactggcacaccctggcccccaag 140
            ||| | ||||||||||  || |||||||||||||||||||| ||||||
Sbjct: 1916 cgcctgttccgtgccgccgtgatggactggcacaccctggcacccaag 1963
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>gb|AY751551.1| Sorghum bicolor pathogenesis-related protein 10a (PR10) gene,
           complete cds
          Length = 1094

 Score = 52.0 bits (26), Expect = 6e-04
 Identities = 62/74 (83%)
 Strand = Plus / Plus

                                                                       
Query: 117 gactggcacaccctggcccccaagctcgcgccacagatcatcaccagcgcccaccctgtt 176
           ||||||||||||||||| |||||| ||||  | ||  || |||||||||||||||| || 
Sbjct: 596 gactggcacaccctggcgcccaaggtcgcttcccacgtcgtcaccagcgcccaccccgtg 655

                         
Query: 177 gagggagaaggcgg 190
           ||||| || |||||
Sbjct: 656 gagggcgacggcgg 669
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>gb|AY751553.1| Sorghum bicolor pathogenesis-related protein 10d (PR10) gene,
            complete cds
          Length = 1617

 Score = 50.1 bits (25), Expect = 0.002
 Identities = 64/77 (83%)
 Strand = Plus / Plus

                                                                        
Query: 114  atggactggcacaccctggcccccaagctcgcgccacagatcatcaccagcgcccaccct 173
            |||||||||||||||||||| |||||| ||||  | ||  || || ||||||||||||| 
Sbjct: 1111 atggactggcacaccctggcgcccaaggtcgcctcccacgtcgtcgccagcgcccacccc 1170

                             
Query: 174  gttgagggagaaggcgg 190
            || ||||| || |||||
Sbjct: 1171 gtggagggcgacggcgg 1187
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>gb|AY953127.1| Zea mays pathogenesis-related protein 10 gene, complete cds
          Length = 713

 Score = 48.1 bits (24), Expect = 0.010
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 114 atggactggcacaccctggcccccaagctcgc 145
           |||||||||||||||||||| |||||| ||||
Sbjct: 138 atggactggcacaccctggcgcccaaggtcgc 169
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>gb|AY103811.1| Zea mays PCO091453 mRNA sequence
          Length = 1087

 Score = 48.1 bits (24), Expect = 0.010
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 114 atggactggcacaccctggcccccaagctcgc 145
           |||||||||||||||||||| |||||| ||||
Sbjct: 356 atggactggcacaccctggcgcccaaggtcgc 387
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>gb|U60764.1|SBU60764 Sorghum bicolor pathogenesis-related protein (PR-10) mRNA,
          complete cds
          Length = 884

 Score = 46.1 bits (23), Expect = 0.039
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                         
Query: 33 gaagcaatggcctccaccaacagttggaccc 63
          ||||||||||||||| ||||||| |||||||
Sbjct: 64 gaagcaatggcctccgccaacagctggaccc 94
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>gb|AY751552.1| Sorghum bicolor pathogenesis-related protein 10c (PR10) gene,
           complete cds
          Length = 1098

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 114 atggactggcacaccctggcccccaagctcgc 145
           ||||||||||||| |||||| |||||| ||||
Sbjct: 602 atggactggcacaacctggcgcccaaggtcgc 633
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>gb|AY714813.1| Cercopithecine herpesvirus 2, complete genome
          Length = 150715

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 128   cctggcccccaagctcgcg 146
             |||||||||||||||||||
Sbjct: 54679 cctggcccccaagctcgcg 54661
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>gb|AC140005.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJA1004C08,
              complete sequence
          Length = 138054

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 28     gacaagaagcaatggcctc 46
              |||||||||||||||||||
Sbjct: 104916 gacaagaagcaatggcctc 104898
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>ref|XM_471326.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 549

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 28  gacaagaagcaatggcctc 46
           |||||||||||||||||||
Sbjct: 478 gacaagaagcaatggcctc 496
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>gb|DP000016.1| Pan troglodytes target 1 genomic scaffold
          Length = 1623484

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 43     cctccaccaacagttggacccat 65
              |||||||||||||||||| ||||
Sbjct: 656698 cctccaccaacagttggaaccat 656720
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>gb|AC147895.2| Xenopus tropicalis clone CH216-3D8, complete sequence
          Length = 212769

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 120   tggcacaccctggccccca 138
             |||||||||||||||||||
Sbjct: 66999 tggcacaccctggccccca 66981
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>gb|AC087264.3| Pan troglodytes clone RP43-150N19, complete sequence
          Length = 116671

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 43    cctccaccaacagttggacccat 65
             |||||||||||||||||| ||||
Sbjct: 76391 cctccaccaacagttggaaccat 76413
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>gb|AC145494.3| Gorilla gorilla gorilla clone CH255-100P16, complete sequence
          Length = 187132

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 43    cctccaccaacagttggacccat 65
             |||||||||||||||||| ||||
Sbjct: 86560 cctccaccaacagttggaaccat 86582
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>gb|AC004416.1| Homo sapiens BAC clone CTB-13N12 from 7, complete sequence
          Length = 32173

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 43    cctccaccaacagttggacccat 65
             |||||||||||||||||| ||||
Sbjct: 30816 cctccaccaacagttggaaccat 30838
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>gb|AC175615.3| Nomascus leucogenys leucogenys clone CH271-480C7, complete sequence
          Length = 165598

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 43    cctccaccaacagttggacccat 65
             |||||||||||||||||| ||||
Sbjct: 97940 cctccaccaacagttggaaccat 97962
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>emb|Z92546.2|HS65A6 Human DNA sequence from clone CTA-65A6 on chromosome 22q11-12 Contains
             the 3' part of the gene for the ortholog of rat CAIN
             (KIAA0330), the gene for a novel Sushi domain (SCR repeat)
             containing protein similar to Mucins, ESTs, an STS, GSSs
             and two putative CpG islands, complete sequence
          Length = 73511

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 38    aatggcctccaccaacagt 56
             |||||||||||||||||||
Sbjct: 62151 aatggcctccaccaacagt 62169
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>gb|AC099399.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1006F06,
             complete sequence
          Length = 122218

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 28    gacaagaagcaatggcctc 46
             |||||||||||||||||||
Sbjct: 95357 gacaagaagcaatggcctc 95375
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>emb|AL607007.3|OSJN00118 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0018J12,
             complete sequence
          Length = 120004

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 28    gacaagaagcaatggcctc 46
             |||||||||||||||||||
Sbjct: 66428 gacaagaagcaatggcctc 66446
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>gb|AC027449.6| Homo sapiens chromosome 18, clone RP11-535A5, complete sequence
          Length = 149660

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 125   caccctggcccccaagctc 143
             |||||||||||||||||||
Sbjct: 46975 caccctggcccccaagctc 46993
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>gb|AY118428.1| Drosophila melanogaster RH14816 full insert cDNA
          Length = 6159

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 152  gatcatcaccagcgcccac 170
            |||||||||||||||||||
Sbjct: 2140 gatcatcaccagcgcccac 2122
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>gb|AC093572.18| Pan troglodytes clone rp43-25g23, complete sequence
          Length = 195652

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 38     aatggcctccaccaacagt 56
              |||||||||||||||||||
Sbjct: 170828 aatggcctccaccaacagt 170846
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>ref|NM_001014526.1| Drosophila melanogaster CG33528-PE, isoform E (CG33528) mRNA,
            complete cds
          Length = 7330

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 152  gatcatcaccagcgcccac 170
            |||||||||||||||||||
Sbjct: 3327 gatcatcaccagcgcccac 3309
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>ref|NM_137036.2| Drosophila melanogaster CG13330-RA (CG13330), mRNA
          Length = 2123

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 152  gatcatcaccagcgcccac 170
            |||||||||||||||||||
Sbjct: 1807 gatcatcaccagcgcccac 1825
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>gb|AY069728.1| Drosophila melanogaster LP03146 full length cDNA
          Length = 1088

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 152 gatcatcaccagcgcccac 170
           |||||||||||||||||||
Sbjct: 755 gatcatcaccagcgcccac 773
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>gb|AC091634.1|AC091634 Drosophila melanogaster, chromosome 2R, region 50A-50B, BAC clone
              BACR36J03, complete sequence
          Length = 159065

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 152    gatcatcaccagcgcccac 170
              |||||||||||||||||||
Sbjct: 107888 gatcatcaccagcgcccac 107870
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 28       gacaagaagcaatggcctc 46
                |||||||||||||||||||
Sbjct: 10085944 gacaagaagcaatggcctc 10085962
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 28       gacaagaagcaatggcctc 46
                |||||||||||||||||||
Sbjct: 20275670 gacaagaagcaatggcctc 20275652
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>gb|DP000025.1| Gorilla gorilla gorilla target 1 genomic scaffold
          Length = 1787293

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 43     cctccaccaacagttggacccat 65
              |||||||||||||||||| ||||
Sbjct: 570997 cctccaccaacagttggaaccat 571019
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>gb|AC138089.2| Homo sapiens chromosome 1 clone RP11-407H12, complete sequence
          Length = 174987

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 145   cgccacagatcatcaccag 163
             |||||||||||||||||||
Sbjct: 20555 cgccacagatcatcaccag 20573
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>dbj|AP005681.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1439_F07
          Length = 153743

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 28    gacaagaagcaatggcctc 46
             |||||||||||||||||||
Sbjct: 54797 gacaagaagcaatggcctc 54779
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>emb|X56935.1|HVSA8GB Herpesvirus SA8 gene for glycoprotein B
          Length = 4585

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 128 cctggcccccaagctcgcg 146
           |||||||||||||||||||
Sbjct: 662 cctggcccccaagctcgcg 680
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>gb|AC007452.1|AC007452 Drosophila melanogaster, chromosome 2R, region 50A1-50B1, P1 clones
             DS02357, DS05586, and BACR48I15, complete sequence
          Length = 146153

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 152   gatcatcaccagcgcccac 170
             |||||||||||||||||||
Sbjct: 19213 gatcatcaccagcgcccac 19195
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>gb|AE003818.3| Drosophila melanogaster chromosome 2R, section 32 of 73 of the complete
              sequence
          Length = 291923

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 152    gatcatcaccagcgcccac 170
              |||||||||||||||||||
Sbjct: 215627 gatcatcaccagcgcccac 215645
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>gb|M57388.1|HSVGBQ Simian herpesvirus SA8 virion envelope glycoprotein gB gene,
           complete cds, clone pSKE
          Length = 2943

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 128 cctggcccccaagctcgcg 146
           |||||||||||||||||||
Sbjct: 9   cctggcccccaagctcgcg 27
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>gb|U14662.1|BHU14662 Baboon herpesvirus HVP2 gB glycoprotein (UL27) gene, complete cds
          Length = 2817

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 128 cctggcccccaagctcgcg 146
           |||||||||||||||||||
Sbjct: 14  cctggcccccaagctcgcg 32
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>gb|L08106.1|BMOGLYTRSY Silk moth glycyl-tRNA synthetase gene, complete cds
          Length = 4414

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 45   tccaccaacagttggacccatga 67
            |||||||||||||| ||||||||
Sbjct: 3475 tccaccaacagttgcacccatga 3497
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>dbj|AP000353.2| Homo sapiens genomic DNA, chromosome 22q11.2, IGLL region,
             clone:KB318B8
          Length = 123828

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 38    aatggcctccaccaacagt 56
             |||||||||||||||||||
Sbjct: 43046 aatggcctccaccaacagt 43028


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,127,269
Number of Sequences: 3902068
Number of extensions: 1127269
Number of successful extensions: 67999
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 67778
Number of HSP's gapped (non-prelim): 213
length of query: 190
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 168
effective length of database: 17,147,199,772
effective search space: 2880729561696
effective search space used: 2880729561696
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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