ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags13g22 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_467236.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1876 Score = 892 bits (450), Expect = 0.0 Identities = 615/670 (91%) Strand = Plus / Plus Query: 9 tctacttcctcaaccttcgcggggacgtcctcatcaatcgcctataccgcgacgatgtcg 68 |||||||||||||||| || ||||||||||||||||| ||||| |||||||||||||||| Sbjct: 226 tctacttcctcaacctccgaggggacgtcctcatcaaccgcctctaccgcgacgatgtcg 285 Query: 69 ggggaaatatggttgatgcattcaggatgcacattatgcaaacaaaagagcttggtacat 128 ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| Sbjct: 286 ggggaaatatggttgatgcattcaggatgcacattatgcaaacaaaagaactgggtacat 345 Query: 129 gccctgttcgacaaataggaggctgttccttcctttacatgaggatcagtaatgtttaca 188 |||||||||| ||||||||||||||||| ||||||||||||||||| |||||||| || | Sbjct: 346 gccctgttcggcaaataggaggctgttcattcctttacatgaggattagtaatgtctata 405 Query: 189 ttgtgatcgtggttagcagcaatgctaatgtttcttgtgctttcaagtttgttgtggagg 248 |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| Sbjct: 406 ttgtgatcgtggttagcagcaatgctaatgttgcttgtgctttcaagtttgtcgtggagg 465 Query: 249 cagtggccctcttcaagtcctactttggtggaacttttgatgaagatgctatcaggaata 308 ||||||| || |||||||| ||||||||||| |||||||||||||||||||||| |||| Sbjct: 466 cagtggctcttttcaagtcatactttggtggtgcttttgatgaagatgctatcagaaata 525 Query: 309 actttgtgttaatatacgagcttcttgatgagattatggacttcggttatcctcagaatc 368 ||||||| ||||| || |||||||||||||| ||||||||||||||||| ||||| || | Sbjct: 526 actttgttttaatctatgagcttcttgatgaaattatggacttcggttaccctcaaaacc 585 Query: 369 tctcacctgaaattttgaagttatatataacccaggaaggcgtacgatcgccattttcct 428 ||||||||||||| || || || |||||||| || ||||| || || ||||||||||||| Sbjct: 586 tctcacctgaaatcttaaaattgtatataactcaagaaggagttcggtcgccattttcct 645 Query: 429 ccaagccttcggataagccagttccaaatgcgaccctgcaagttactggcgctgttggtt 488 |||||||||| |||||||| ||||| ||||| || || ||||||||||| |||||||||| Sbjct: 646 ccaagccttcagataagcctgttccgaatgccactctacaagttactggtgctgttggtt 705 Query: 489 ggagaagagagggtcttgtgtacaagaagaatgaggttttcttggacattgttgagagcg 548 ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| || | Sbjct: 706 ggagaagagagggtcttatgtacaagaagaacgaggttttcttggacattgttgaaagtg 765 Query: 549 taaaccttcttatgtcttctaaagggagtgttctacgatgtgatgtgacaggaaagattc 608 |||| |||||||||||||||||||||||||||||||||||||||||||| || ||||||| Sbjct: 766 taaatcttcttatgtcttctaaagggagtgttctacgatgtgatgtgactgggaagattc 825 Query: 609 ttatgaagtgcttcctttctggaatgcctgatctgaagttgggacttaatgacaaaattg 668 ||||||||||||||||||||||||||||||||||||| |||||| | |||||||| || | Sbjct: 826 ttatgaagtgcttcctttctggaatgcctgatctgaaattgggattaaatgacaagatcg 885 Query: 669 gacttgaaaa 678 | |||||||| Sbjct: 886 ggcttgaaaa 895
>dbj|AK102342.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033091B08, full insert sequence Length = 1876 Score = 892 bits (450), Expect = 0.0 Identities = 615/670 (91%) Strand = Plus / Plus Query: 9 tctacttcctcaaccttcgcggggacgtcctcatcaatcgcctataccgcgacgatgtcg 68 |||||||||||||||| || ||||||||||||||||| ||||| |||||||||||||||| Sbjct: 226 tctacttcctcaacctccgaggggacgtcctcatcaaccgcctctaccgcgacgatgtcg 285 Query: 69 ggggaaatatggttgatgcattcaggatgcacattatgcaaacaaaagagcttggtacat 128 ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| Sbjct: 286 ggggaaatatggttgatgcattcaggatgcacattatgcaaacaaaagaactgggtacat 345 Query: 129 gccctgttcgacaaataggaggctgttccttcctttacatgaggatcagtaatgtttaca 188 |||||||||| ||||||||||||||||| ||||||||||||||||| |||||||| || | Sbjct: 346 gccctgttcggcaaataggaggctgttcattcctttacatgaggattagtaatgtctata 405 Query: 189 ttgtgatcgtggttagcagcaatgctaatgtttcttgtgctttcaagtttgttgtggagg 248 |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| Sbjct: 406 ttgtgatcgtggttagcagcaatgctaatgttgcttgtgctttcaagtttgtcgtggagg 465 Query: 249 cagtggccctcttcaagtcctactttggtggaacttttgatgaagatgctatcaggaata 308 ||||||| || |||||||| ||||||||||| |||||||||||||||||||||| |||| Sbjct: 466 cagtggctcttttcaagtcatactttggtggtgcttttgatgaagatgctatcagaaata 525 Query: 309 actttgtgttaatatacgagcttcttgatgagattatggacttcggttatcctcagaatc 368 ||||||| ||||| || |||||||||||||| ||||||||||||||||| ||||| || | Sbjct: 526 actttgttttaatctatgagcttcttgatgaaattatggacttcggttaccctcaaaacc 585 Query: 369 tctcacctgaaattttgaagttatatataacccaggaaggcgtacgatcgccattttcct 428 ||||||||||||| || || || |||||||| || ||||| || || ||||||||||||| Sbjct: 586 tctcacctgaaatcttaaaattgtatataactcaagaaggagttcggtcgccattttcct 645 Query: 429 ccaagccttcggataagccagttccaaatgcgaccctgcaagttactggcgctgttggtt 488 |||||||||| |||||||| ||||| ||||| || || ||||||||||| |||||||||| Sbjct: 646 ccaagccttcagataagcctgttccgaatgccactctacaagttactggtgctgttggtt 705 Query: 489 ggagaagagagggtcttgtgtacaagaagaatgaggttttcttggacattgttgagagcg 548 ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| || | Sbjct: 706 ggagaagagagggtcttatgtacaagaagaacgaggttttcttggacattgttgaaagtg 765 Query: 549 taaaccttcttatgtcttctaaagggagtgttctacgatgtgatgtgacaggaaagattc 608 |||| |||||||||||||||||||||||||||||||||||||||||||| || ||||||| Sbjct: 766 taaatcttcttatgtcttctaaagggagtgttctacgatgtgatgtgactgggaagattc 825 Query: 609 ttatgaagtgcttcctttctggaatgcctgatctgaagttgggacttaatgacaaaattg 668 ||||||||||||||||||||||||||||||||||||| |||||| | |||||||| || | Sbjct: 826 ttatgaagtgcttcctttctggaatgcctgatctgaaattgggattaaatgacaagatcg 885 Query: 669 gacttgaaaa 678 | |||||||| Sbjct: 886 ggcttgaaaa 895
>gb|AY106723.1| Zea mays PCO110570 mRNA sequence Length = 1984 Score = 852 bits (430), Expect = 0.0 Identities = 610/670 (91%) Strand = Plus / Plus Query: 9 tctacttcctcaaccttcgcggggacgtcctcatcaatcgcctataccgcgacgatgtcg 68 ||||||||||||||||||||||||||||||||||||| ||||| ||||| || ||||| | Sbjct: 203 tctacttcctcaaccttcgcggggacgtcctcatcaaccgcctctaccgtgatgatgttg 262 Query: 69 ggggaaatatggttgatgcattcaggatgcacattatgcaaacaaaagagcttggtacat 128 ||||||||||||||||||| ||||| ||||| || |||||||||||||| ||||| |||| Sbjct: 263 ggggaaatatggttgatgcgttcagaatgcatatcatgcaaacaaaagaacttggcacat 322 Query: 129 gccctgttcgacaaataggaggctgttccttcctttacatgaggatcagtaatgtttaca 188 |||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 323 gccctgttcgtcaaataggaggctgctccttcctttatatgaggatcagtaatgtttaca 382 Query: 189 ttgtgatcgtggttagcagcaatgctaatgtttcttgtgctttcaagtttgttgtggagg 248 |||||||||| ||||||||||||||||||||| | ||||||||||| |||||||| |||| Sbjct: 383 ttgtgatcgtagttagcagcaatgctaatgttgcatgtgctttcaaatttgttgtcgagg 442 Query: 249 cagtggccctcttcaagtcctactttggtggaacttttgatgaagatgctatcaggaata 308 | ||||| ||||||||||||||||| |||||| ||||||||||||| ||||||||||||| Sbjct: 443 cggtggctctcttcaagtcctacttcggtggagcttttgatgaagacgctatcaggaata 502 Query: 309 actttgtgttaatatacgagcttcttgatgagattatggacttcggttatcctcagaatc 368 ||||||| || ||||| || |||||||||||||| ||||| || ||||||||||| || | Sbjct: 503 actttgttttgatatatgaacttcttgatgagatcatggattttggttatcctcaaaacc 562 Query: 369 tctcacctgaaattttgaagttatatataacccaggaaggcgtacgatcgccattttcct 428 | |||||||||||||||||||| |||||||| || ||||| || || || |||||||||| Sbjct: 563 tgtcacctgaaattttgaagttgtatataactcaagaaggtgttcggtcaccattttcct 622 Query: 429 ccaagccttcggataagccagttccaaatgcgaccctgcaagttactggcgctgttggtt 488 | ||||| || || ||||| |||||||||||||| || ||||| |||||||||||||||| Sbjct: 623 caaagccctcagagaagcctgttccaaatgcgactcttcaagtcactggcgctgttggtt 682 Query: 489 ggagaagagagggtcttgtgtacaagaagaatgaggttttcttggacattgttgagagcg 548 ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 683 ggagaagagagggacttgtgtacaagaagaatgaggttttcttggacatagttgagagtg 742 Query: 549 taaaccttcttatgtcttctaaagggagtgttctacgatgtgatgtgacaggaaagattc 608 ||||||||||||||||||| ||||||||||||||| ||||||||||||| |||||||||| Sbjct: 743 taaaccttcttatgtcttcgaaagggagtgttctaagatgtgatgtgacgggaaagattc 802 Query: 609 ttatgaagtgcttcctttctggaatgcctgatctgaagttgggacttaatgacaaaattg 668 ||||||| |||||||||||||||||||||||||||||| ||||| | |||||||| |||| Sbjct: 803 ttatgaaatgcttcctttctggaatgcctgatctgaagctgggattaaatgacaagattg 862 Query: 669 gacttgaaaa 678 |||||||||| Sbjct: 863 gacttgaaaa 872
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 285 bits (144), Expect = 9e-74 Identities = 171/180 (95%) Strand = Plus / Plus Query: 69 ggggaaatatggttgatgcattcaggatgcacattatgcaaacaaaagagcttggtacat 128 ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| Sbjct: 28375125 ggggaaatatggttgatgcattcaggatgcacattatgcaaacaaaagaactgggtacat 28375184 Query: 129 gccctgttcgacaaataggaggctgttccttcctttacatgaggatcagtaatgtttaca 188 |||||||||| ||||||||||||||||| ||||||||||||||||| |||||||| || | Sbjct: 28375185 gccctgttcggcaaataggaggctgttcattcctttacatgaggattagtaatgtctata 28375244 Query: 189 ttgtgatcgtggttagcagcaatgctaatgtttcttgtgctttcaagtttgttgtggagg 248 |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| Sbjct: 28375245 ttgtgatcgtggttagcagcaatgctaatgttgcttgtgctttcaagtttgtcgtggagg 28375304 Score = 151 bits (76), Expect = 4e-33 Identities = 100/108 (92%) Strand = Plus / Plus Query: 571 agggagtgttctacgatgtgatgtgacaggaaagattcttatgaagtgcttcctttctgg 630 ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| Sbjct: 28376939 agggagtgttctacgatgtgatgtgactgggaagattcttatgaagtgcttcctttctgg 28376998 Query: 631 aatgcctgatctgaagttgggacttaatgacaaaattggacttgaaaa 678 ||||||||||||||| |||||| | |||||||| || || |||||||| Sbjct: 28376999 aatgcctgatctgaaattgggattaaatgacaagatcgggcttgaaaa 28377046 Score = 115 bits (58), Expect = 2e-22 Identities = 85/94 (90%) Strand = Plus / Plus Query: 432 agccttcggataagccagttccaaatgcgaccctgcaagttactggcgctgttggttgga 491 ||||||| |||||||| ||||| ||||| || || ||||||||||| ||||||||||||| Sbjct: 28376377 agccttcagataagcctgttccgaatgccactctacaagttactggtgctgttggttgga 28376436 Query: 492 gaagagagggtcttgtgtacaagaagaatgaggt 525 |||||||||||||| ||||||||||||| ||||| Sbjct: 28376437 gaagagagggtcttatgtacaagaagaacgaggt 28376470 Score = 113 bits (57), Expect = 8e-22 Identities = 84/93 (90%) Strand = Plus / Plus Query: 246 aggcagtggccctcttcaagtcctactttggtggaacttttgatgaagatgctatcagga 305 |||||||||| || |||||||| ||||||||||| |||||||||||||||||||||| | Sbjct: 28375973 aggcagtggctcttttcaagtcatactttggtggtgcttttgatgaagatgctatcagaa 28376032 Query: 306 ataactttgtgttaatatacgagcttcttgatg 338 |||||||||| ||||| || ||||||||||||| Sbjct: 28376033 ataactttgttttaatctatgagcttcttgatg 28376065 Score = 91.7 bits (46), Expect = 3e-15 Identities = 58/62 (93%) Strand = Plus / Plus Query: 9 tctacttcctcaaccttcgcggggacgtcctcatcaatcgcctataccgcgacgatgtcg 68 |||||||||||||||| || ||||||||||||||||| ||||| |||||||||||||||| Sbjct: 28374320 tctacttcctcaacctccgaggggacgtcctcatcaaccgcctctaccgcgacgatgtcg 28374379 Query: 69 gg 70 || Sbjct: 28374380 gg 28374381 Score = 89.7 bits (45), Expect = 1e-14 Identities = 81/93 (87%) Strand = Plus / Plus Query: 341 attatggacttcggttatcctcagaatctctcacctgaaattttgaagttatatataacc 400 ||||||||||||||||| ||||| || |||||||||||||| || || || |||||||| Sbjct: 28376164 attatggacttcggttaccctcaaaacctctcacctgaaatcttaaaattgtatataact 28376223 Query: 401 caggaaggcgtacgatcgccattttcctccaag 433 || ||||| || || |||||||||||||||||| Sbjct: 28376224 caagaaggagttcggtcgccattttcctccaag 28376256 Score = 79.8 bits (40), Expect = 1e-11 Identities = 49/52 (94%) Strand = Plus / Plus Query: 522 aggttttcttggacattgttgagagcgtaaaccttcttatgtcttctaaagg 573 |||||||||||||||||||||| || ||||| |||||||||||||||||||| Sbjct: 28376787 aggttttcttggacattgttgaaagtgtaaatcttcttatgtcttctaaagg 28376838
>dbj|AP004096.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1743_B12 Length = 175645 Score = 285 bits (144), Expect = 9e-74 Identities = 171/180 (95%) Strand = Plus / Plus Query: 69 ggggaaatatggttgatgcattcaggatgcacattatgcaaacaaaagagcttggtacat 128 ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| Sbjct: 166882 ggggaaatatggttgatgcattcaggatgcacattatgcaaacaaaagaactgggtacat 166941 Query: 129 gccctgttcgacaaataggaggctgttccttcctttacatgaggatcagtaatgtttaca 188 |||||||||| ||||||||||||||||| ||||||||||||||||| |||||||| || | Sbjct: 166942 gccctgttcggcaaataggaggctgttcattcctttacatgaggattagtaatgtctata 167001 Query: 189 ttgtgatcgtggttagcagcaatgctaatgtttcttgtgctttcaagtttgttgtggagg 248 |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| Sbjct: 167002 ttgtgatcgtggttagcagcaatgctaatgttgcttgtgctttcaagtttgtcgtggagg 167061 Score = 151 bits (76), Expect = 4e-33 Identities = 100/108 (92%) Strand = Plus / Plus Query: 571 agggagtgttctacgatgtgatgtgacaggaaagattcttatgaagtgcttcctttctgg 630 ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| Sbjct: 168696 agggagtgttctacgatgtgatgtgactgggaagattcttatgaagtgcttcctttctgg 168755 Query: 631 aatgcctgatctgaagttgggacttaatgacaaaattggacttgaaaa 678 ||||||||||||||| |||||| | |||||||| || || |||||||| Sbjct: 168756 aatgcctgatctgaaattgggattaaatgacaagatcgggcttgaaaa 168803 Score = 115 bits (58), Expect = 2e-22 Identities = 85/94 (90%) Strand = Plus / Plus Query: 432 agccttcggataagccagttccaaatgcgaccctgcaagttactggcgctgttggttgga 491 ||||||| |||||||| ||||| ||||| || || ||||||||||| ||||||||||||| Sbjct: 168134 agccttcagataagcctgttccgaatgccactctacaagttactggtgctgttggttgga 168193 Query: 492 gaagagagggtcttgtgtacaagaagaatgaggt 525 |||||||||||||| ||||||||||||| ||||| Sbjct: 168194 gaagagagggtcttatgtacaagaagaacgaggt 168227 Score = 113 bits (57), Expect = 8e-22 Identities = 84/93 (90%) Strand = Plus / Plus Query: 246 aggcagtggccctcttcaagtcctactttggtggaacttttgatgaagatgctatcagga 305 |||||||||| || |||||||| ||||||||||| |||||||||||||||||||||| | Sbjct: 167730 aggcagtggctcttttcaagtcatactttggtggtgcttttgatgaagatgctatcagaa 167789 Query: 306 ataactttgtgttaatatacgagcttcttgatg 338 |||||||||| ||||| || ||||||||||||| Sbjct: 167790 ataactttgttttaatctatgagcttcttgatg 167822 Score = 91.7 bits (46), Expect = 3e-15 Identities = 58/62 (93%) Strand = Plus / Plus Query: 9 tctacttcctcaaccttcgcggggacgtcctcatcaatcgcctataccgcgacgatgtcg 68 |||||||||||||||| || ||||||||||||||||| ||||| |||||||||||||||| Sbjct: 166077 tctacttcctcaacctccgaggggacgtcctcatcaaccgcctctaccgcgacgatgtcg 166136 Query: 69 gg 70 || Sbjct: 166137 gg 166138 Score = 89.7 bits (45), Expect = 1e-14 Identities = 81/93 (87%) Strand = Plus / Plus Query: 341 attatggacttcggttatcctcagaatctctcacctgaaattttgaagttatatataacc 400 ||||||||||||||||| ||||| || |||||||||||||| || || || |||||||| Sbjct: 167921 attatggacttcggttaccctcaaaacctctcacctgaaatcttaaaattgtatataact 167980 Query: 401 caggaaggcgtacgatcgccattttcctccaag 433 || ||||| || || |||||||||||||||||| Sbjct: 167981 caagaaggagttcggtcgccattttcctccaag 168013 Score = 79.8 bits (40), Expect = 1e-11 Identities = 49/52 (94%) Strand = Plus / Plus Query: 522 aggttttcttggacattgttgagagcgtaaaccttcttatgtcttctaaagg 573 |||||||||||||||||||||| || ||||| |||||||||||||||||||| Sbjct: 168544 aggttttcttggacattgttgaaagtgtaaatcttcttatgtcttctaaagg 168595
>ref|NM_203166.1| Arabidopsis thaliana unknown protein AT5G46630 transcript variant AT5G46630.2 mRNA, complete cds Length = 1843 Score = 260 bits (131), Expect = 5e-66 Identities = 410/503 (81%) Strand = Plus / Plus Query: 173 atcagtaatgtttacattgtgatcgtggttagcagcaatgctaatgtttcttgtgctttc 232 ||||| ||||| ||||| || || || || || ||||||||||||||| |||||| ||| Sbjct: 319 atcagcaatgtctacatcgtcattgttgtcagtagcaatgctaatgttgcttgtggattc 378 Query: 233 aagtttgttgtggaggcagtggccctcttcaagtcctactttggtggaacttttgatgaa 292 || |||||||| ||||| || || | ||||| || |||||||||||| ||||||||||| Sbjct: 379 aaatttgttgttgaggctgtagctttgttcaaatcatactttggtggagcttttgatgaa 438 Query: 293 gatgctatcaggaataactttgtgttaatatacgagcttcttgatgagattatggacttc 352 || ||||| || ||||||||||| | || || || | | ||||||||||||||||| Sbjct: 439 gacgctattagaaataactttgttctgatttatgaattgttggatgagattatggacttt 498 Query: 353 ggttatcctcagaatctctcacctgaaattttgaagttatatataacccaggaaggcgta 412 || ||||| || |||||||||||||||||||| || | ||||| || |||||||| ||| Sbjct: 499 ggctatccacaaaatctctcacctgaaattttaaaactttatatcactcaggaaggtgta 558 Query: 413 cgatcgccattttcctccaagccttcggataagccagttccaaatgcgaccctgcaagtt 472 || || |||||||| || ||||| || || || ||||||||||| || | |||||| Sbjct: 559 cggtcaccattttcatcgaagccaaaagacaaacctgttccaaatgcaacattacaagtt 618 Query: 473 actggcgctgttggttggagaagagagggtcttgtgtacaagaagaatgaggttttcttg 532 || || ||||||||||||||||||||||| |||| ||||| ||||||||||| || || Sbjct: 619 acaggtgctgttggttggagaagagagggccttgcttacaaaaagaatgaggtgtttctg 678 Query: 533 gacattgttgagagcgtaaaccttcttatgtcttctaaagggagtgttctacgatgtgat 592 || ||||| || || ||||||||||| ||||| |||||||| | |||||| || |||||| Sbjct: 679 gatattgtggaaagtgtaaaccttctgatgtcctctaaaggcaatgttcttcggtgtgat 738 Query: 593 gtgacaggaaagattcttatgaagtgcttcctttctggaatgcctgatctgaagttggga 652 ||||| || ||| || | ||||| || |||||||| |||||||||||| |||||||||| Sbjct: 739 gtgacggggaaggttttaatgaaatgtttcctttcgggaatgcctgatttgaagttgggg 798 Query: 653 cttaatgacaaaattggacttga 675 | ||||| |||||||| ||||| Sbjct: 799 ttgaatgataaaattggtcttga 821
>ref|NM_124033.2| Arabidopsis thaliana unknown protein AT5G46630 transcript variant AT5G46630.1 mRNA, complete cds Length = 1688 Score = 260 bits (131), Expect = 5e-66 Identities = 410/503 (81%) Strand = Plus / Plus Query: 173 atcagtaatgtttacattgtgatcgtggttagcagcaatgctaatgtttcttgtgctttc 232 ||||| ||||| ||||| || || || || || ||||||||||||||| |||||| ||| Sbjct: 319 atcagcaatgtctacatcgtcattgttgtcagtagcaatgctaatgttgcttgtggattc 378 Query: 233 aagtttgttgtggaggcagtggccctcttcaagtcctactttggtggaacttttgatgaa 292 || |||||||| ||||| || || | ||||| || |||||||||||| ||||||||||| Sbjct: 379 aaatttgttgttgaggctgtagctttgttcaaatcatactttggtggagcttttgatgaa 438 Query: 293 gatgctatcaggaataactttgtgttaatatacgagcttcttgatgagattatggacttc 352 || ||||| || ||||||||||| | || || || | | ||||||||||||||||| Sbjct: 439 gacgctattagaaataactttgttctgatttatgaattgttggatgagattatggacttt 498 Query: 353 ggttatcctcagaatctctcacctgaaattttgaagttatatataacccaggaaggcgta 412 || ||||| || |||||||||||||||||||| || | ||||| || |||||||| ||| Sbjct: 499 ggctatccacaaaatctctcacctgaaattttaaaactttatatcactcaggaaggtgta 558 Query: 413 cgatcgccattttcctccaagccttcggataagccagttccaaatgcgaccctgcaagtt 472 || || |||||||| || ||||| || || || ||||||||||| || | |||||| Sbjct: 559 cggtcaccattttcatcgaagccaaaagacaaacctgttccaaatgcaacattacaagtt 618 Query: 473 actggcgctgttggttggagaagagagggtcttgtgtacaagaagaatgaggttttcttg 532 || || ||||||||||||||||||||||| |||| ||||| ||||||||||| || || Sbjct: 619 acaggtgctgttggttggagaagagagggccttgcttacaaaaagaatgaggtgtttctg 678 Query: 533 gacattgttgagagcgtaaaccttcttatgtcttctaaagggagtgttctacgatgtgat 592 || ||||| || || ||||||||||| ||||| |||||||| | |||||| || |||||| Sbjct: 679 gatattgtggaaagtgtaaaccttctgatgtcctctaaaggcaatgttcttcggtgtgat 738 Query: 593 gtgacaggaaagattcttatgaagtgcttcctttctggaatgcctgatctgaagttggga 652 ||||| || ||| || | ||||| || |||||||| |||||||||||| |||||||||| Sbjct: 739 gtgacggggaaggttttaatgaaatgtttcctttcgggaatgcctgatttgaagttgggg 798 Query: 653 cttaatgacaaaattggacttga 675 | ||||| |||||||| ||||| Sbjct: 799 ttgaatgataaaattggtcttga 821
>gb|AF385713.1|AF385713 Arabidopsis thaliana AT5g46630/MZA15_2 mRNA, complete sequence Length = 1686 Score = 260 bits (131), Expect = 5e-66 Identities = 410/503 (81%) Strand = Plus / Plus Query: 173 atcagtaatgtttacattgtgatcgtggttagcagcaatgctaatgtttcttgtgctttc 232 ||||| ||||| ||||| || || || || || ||||||||||||||| |||||| ||| Sbjct: 319 atcagcaatgtctacatcgtcattgttgtcagtagcaatgctaatgttgcttgtggattc 378 Query: 233 aagtttgttgtggaggcagtggccctcttcaagtcctactttggtggaacttttgatgaa 292 || |||||||| ||||| || || | ||||| || |||||||||||| ||||||||||| Sbjct: 379 aaatttgttgttgaggctgtagctttgttcaaatcatactttggtggagcttttgatgaa 438 Query: 293 gatgctatcaggaataactttgtgttaatatacgagcttcttgatgagattatggacttc 352 || ||||| || ||||||||||| | || || || | | ||||||||||||||||| Sbjct: 439 gacgctattagaaataactttgttctgatttatgaattgttggatgagattatggacttt 498 Query: 353 ggttatcctcagaatctctcacctgaaattttgaagttatatataacccaggaaggcgta 412 || ||||| || |||||||||||||||||||| || | ||||| || |||||||| ||| Sbjct: 499 ggctatccacaaaatctctcacctgaaattttaaaactttatatcactcaggaaggtgta 558 Query: 413 cgatcgccattttcctccaagccttcggataagccagttccaaatgcgaccctgcaagtt 472 || || |||||||| || ||||| || || || ||||||||||| || | |||||| Sbjct: 559 cggtcaccattttcatcgaagccaaaagacaaacctgttccaaatgcaacattacaagtt 618 Query: 473 actggcgctgttggttggagaagagagggtcttgtgtacaagaagaatgaggttttcttg 532 || || ||||||||||||||||||||||| |||| ||||| ||||||||||| || || Sbjct: 619 acaggtgctgttggttggagaagagagggccttgcttacaaaaagaatgaggtgtttctg 678 Query: 533 gacattgttgagagcgtaaaccttcttatgtcttctaaagggagtgttctacgatgtgat 592 || ||||| || || ||||||||||| ||||| |||||||| | |||||| || |||||| Sbjct: 679 gatattgtggaaagtgtaaaccttctgatgtcctctaaaggcaatgttcttcggtgtgat 738 Query: 593 gtgacaggaaagattcttatgaagtgcttcctttctggaatgcctgatctgaagttggga 652 ||||| || ||| || | ||||| || |||||||| |||||||||||| |||||||||| Sbjct: 739 gtgacggggaaggttttaatgaaatgtttcctttcgggaatgcctgatttgaagttgggg 798 Query: 653 cttaatgacaaaattggacttga 675 | ||||| |||||||| ||||| Sbjct: 799 ttgaatgataaaattggtcttga 821
>emb|BX830242.1|CNS0A069 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB68ZE02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1723 Score = 260 bits (131), Expect = 5e-66 Identities = 410/503 (81%) Strand = Plus / Plus Query: 173 atcagtaatgtttacattgtgatcgtggttagcagcaatgctaatgtttcttgtgctttc 232 ||||| ||||| ||||| || || || || || ||||||||||||||| |||||| ||| Sbjct: 318 atcagcaatgtctacatcgtcattgttgtcagtagcaatgctaatgttgcttgtggattc 377 Query: 233 aagtttgttgtggaggcagtggccctcttcaagtcctactttggtggaacttttgatgaa 292 || |||||||| ||||| || || | ||||| || |||||||||||| ||||||||||| Sbjct: 378 aaatttgttgttgaggctgtagctttgttcaaatcatactttggtggagcttttgatgaa 437 Query: 293 gatgctatcaggaataactttgtgttaatatacgagcttcttgatgagattatggacttc 352 || ||||| || ||||||||||| | || || || | | ||||||||||||||||| Sbjct: 438 gacgctattagaaataactttgttctgatttatgaattgttggatgagattatggacttt 497 Query: 353 ggttatcctcagaatctctcacctgaaattttgaagttatatataacccaggaaggcgta 412 || ||||| || |||||||||||||||||||| || | ||||| || |||||||| ||| Sbjct: 498 ggctatccacaaaatctctcacctgaaattttaaaactttatatcactcaggaaggtgta 557 Query: 413 cgatcgccattttcctccaagccttcggataagccagttccaaatgcgaccctgcaagtt 472 || || |||||||| || ||||| || || || ||||||||||| || | |||||| Sbjct: 558 cggtcaccattttcatcgaagccaaaagacaaacctgttccaaatgcaacattacaagtt 617 Query: 473 actggcgctgttggttggagaagagagggtcttgtgtacaagaagaatgaggttttcttg 532 || || ||||||||||||||||||||||| |||| ||||| ||||||||||| || || Sbjct: 618 acaggtgctgttggttggagaagagagggccttgcttacaaaaagaatgaggtgtttctg 677 Query: 533 gacattgttgagagcgtaaaccttcttatgtcttctaaagggagtgttctacgatgtgat 592 || ||||| || || ||||||||||| ||||| |||||||| | |||||| || |||||| Sbjct: 678 gatattgtggaaagtgtaaaccttctgatgtcctctaaaggcaatgttcttcggtgtgat 737 Query: 593 gtgacaggaaagattcttatgaagtgcttcctttctggaatgcctgatctgaagttggga 652 ||||| || ||| || | ||||| || |||||||| |||||||||||| |||||||||| Sbjct: 738 gtgacggggaaggttttaatgaaatgtttcctttcgggaatgcctgatttgaagttgggg 797 Query: 653 cttaatgacaaaattggacttga 675 | ||||| |||||||| ||||| Sbjct: 798 ttgaatgataaaattggtcttga 820
>emb|BX830780.1|CNS09ZI4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS21ZH08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1533 Score = 236 bits (119), Expect = 8e-59 Identities = 407/503 (80%) Strand = Plus / Plus Query: 173 atcagtaatgtttacattgtgatcgtggttagcagcaatgctaatgtttcttgtgctttc 232 ||||| ||||| ||||| || || || || || ||||||||||||||| |||||| ||| Sbjct: 312 atcagcaatgtctacatcgtcattgttgtcagtagcaatgctaatgttgcttgtggattc 371 Query: 233 aagtttgttgtggaggcagtggccctcttcaagtcctactttggtggaacttttgatgaa 292 || |||||||| ||||| || || | ||||| || |||||||||||| ||||||||||| Sbjct: 372 aaatttgttgttgaggctgtagctttgttcaaatcatactttggtggagcttttgatgaa 431 Query: 293 gatgctatcaggaataactttgtgttaatatacgagcttcttgatgagattatggacttc 352 || ||||| || ||| ||||||| | || || || | | ||||||||||||||||| Sbjct: 432 gacgctattagaaatgactttgttctgatttatgaattgttggatgagattatggacttt 491 Query: 353 ggttatcctcagaatctctcacctgaaattttgaagttatatataacccaggaaggcgta 412 || ||||| || |||||||||||||| ||||| | | ||||| || |||||||| ||| Sbjct: 492 ggctatccacaaaatctctcacctgagattttaagactttatatcactcaggaaggtgta 551 Query: 413 cgatcgccattttcctccaagccttcggataagccagttccaaatgcgaccctgcaagtt 472 || || |||||||| || ||||| || || || ||||||||||| || | |||||| Sbjct: 552 cggtcaccattttcatcgaagccaaaagacaaacctgttccaaatgcaacattacaagtt 611 Query: 473 actggcgctgttggttggagaagagagggtcttgtgtacaagaagaatgaggttttcttg 532 || || ||||||||||||||||||||||| |||| ||||| ||||||||||| || || Sbjct: 612 acaggtgctgttggttggagaagagagggccttgcttacaaaaagaatgaggtgtttctg 671 Query: 533 gacattgttgagagcgtaaaccttcttatgtcttctaaagggagtgttctacgatgtgat 592 || ||||| || || ||||||||||| ||||| |||||||| | |||||| || |||||| Sbjct: 672 gatattgtggaaagtgtaaaccttctgatgtcctctaaaggcaatgttcttcggtgtgat 731 Query: 593 gtgacaggaaagattcttatgaagtgcttcctttctggaatgcctgatctgaagttggga 652 ||||| || ||| || | ||||| || |||||||| |||||||||||| |||||||||| Sbjct: 732 gtgacggggaaggttttaatgaaatgtttcctttcgggaatgcctgatttgaagttgggg 791 Query: 653 cttaatgacaaaattggacttga 675 | ||||| |||||||| ||||| Sbjct: 792 ttgaatgataaaattggtcttga 814
>gb|AF009631.1|AF009631 Arabidopsis thaliana AP47/50p mRNA, complete cds Length = 1662 Score = 236 bits (119), Expect = 8e-59 Identities = 407/503 (80%) Strand = Plus / Plus Query: 173 atcagtaatgtttacattgtgatcgtggttagcagcaatgctaatgtttcttgtgctttc 232 ||||| ||||| |||||||| || || || || ||||||||||| ||| |||||| ||| Sbjct: 322 atcagcaatgtctacattgtcattgttgtcagtagcaatgctaacgttgcttgtggattc 381 Query: 233 aagtttgttgtggaggcagtggccctcttcaagtcctactttggtggaacttttgatgaa 292 || || ||||| ||||| || || | ||||| || |||||||||||| ||||||||||| Sbjct: 382 aaattcgttgttgaggctgttgctttgttcaaatcatactttggtggagcttttgatgaa 441 Query: 293 gatgctatcaggaataactttgtgttaatatacgagcttcttgatgagattatggacttc 352 || ||||| || ||||||||||| | || || || | | || |||||||||||||| Sbjct: 442 gacgctattagaaataactttgttctgatttatgaattgttggacgagattatggacttt 501 Query: 353 ggttatcctcagaatctctcacctgaaattttgaagttatatataacccaggaaggcgta 412 || ||||| || |||||||| |||||||||||||| | ||||| || |||||||| ||| Sbjct: 502 ggctatccacaaaatctctcccctgaaattttgaaactttatatcactcaggaaggtgta 561 Query: 413 cgatcgccattttcctccaagccttcggataagccagttccaaatgcgaccctgcaagtt 472 || || |||||||| || ||||| ||| ||||| ||||||||||| || | |||||| Sbjct: 562 cggtcaccattttcatcgaagccaaaggacaagcctgttccaaatgcaacattacaagtt 621 Query: 473 actggcgctgttggttggagaagagagggtcttgtgtacaagaagaatgaggttttcttg 532 || || ||||||||||||||||||||||| |||| || || ||||||||||| || || Sbjct: 622 acgggtgctgttggttggagaagagagggccttgcttataaaaagaatgaggtgtttctg 681 Query: 533 gacattgttgagagcgtaaaccttcttatgtcttctaaagggagtgttctacgatgtgat 592 || ||||| || || ||||||||||| ||||| |||||||| | ||||| || |||||| Sbjct: 682 gatattgtggaaagtgtaaaccttctgatgtcctctaaaggcaacgttcttcggtgtgat 741 Query: 593 gtgacaggaaagattcttatgaagtgcttcctttctggaatgcctgatctgaagttggga 652 ||||| || || || | ||||| || |||||||| |||||||||||| |||||||||| Sbjct: 742 gtgaccgggaaagttttaatgaaatgtttcctttcgggaatgcctgatttgaagttgggg 801 Query: 653 cttaatgacaaaattggacttga 675 | ||||| |||||||| ||||| Sbjct: 802 ttgaatgataaaattggtcttga 824
>emb|BX841656.1|CNS09YHR Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS45ZA12 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1568 Score = 204 bits (103), Expect = 3e-49 Identities = 404/503 (80%), Gaps = 1/503 (0%) Strand = Plus / Plus Query: 173 atcagtaatgtttacattgtgatcgtggttagcagcaatgctaatgtttcttgtgctttc 232 ||||| ||||| ||||| || || || || || ||||||||||||||| |||||| ||| Sbjct: 296 atcagcaatgtctacatcgtcattgttgtcagtagcaatgctaatgttgcttgtggattc 355 Query: 233 aagtttgttgtggaggcagtggccctcttcaagtcctactttggtggaacttttgatgaa 292 || |||||||| ||||| || || | ||||| || |||||||||||| ||||||||||| Sbjct: 356 aaatttgttgttgaggctgtagctttgttcaaatcatactttggtggagcttttgatgaa 415 Query: 293 gatgctatcaggaataactttgtgttaatatacgagcttcttgatgagattatggacttc 352 || ||||| || || ||||||| | || || || | | ||||||||||||||||| Sbjct: 416 gacgctattagagatgactttgttctgatttatgaattgttggatgagattatggacttt 475 Query: 353 ggttatcctcagaatctctcacctgaaattttgaagttatatataacccaggaaggcgta 412 || ||||| || |||||||||||||| ||||| | | ||||| || |||||||| ||| Sbjct: 476 ggctatccacaaaatctctcacctgagattttaagactttatatcactcaggaaggtgta 535 Query: 413 cgatcgccattttcctccaagccttcggataagccagttccaaatgcgaccctgcaagtt 472 || || |||||||| || ||||| || || || ||||||||||| || | |||||| Sbjct: 536 cggtcaccattttcatcgaagccaaaagacaaacctgttccaaatgcaacattacaagtt 595 Query: 473 actggcgctgttggttggagaagagagggtcttgtgtacaagaagaatgaggttttcttg 532 || || ||||||||||||||||||||||| |||| ||||| |||||||||| || || Sbjct: 596 acaggtgctgttggttggagaagagagggccttgcttacaaagagaatgaggtgtttctg 655 Query: 533 gacattgttgagagcgtaaaccttcttatgtcttctaaagggagtgttctacgatgtgat 592 || ||||| || || |||| |||||| ||||| |||||||| | |||||| || |||||| Sbjct: 656 gatattgtggaaagtgtaa-ccttctgatgtcctctaaaggcaatgttcttcggtgtgat 714 Query: 593 gtgacaggaaagattcttatgaagtgcttcctttctggaatgcctgatctgaagttggga 652 ||||| || ||| || | ||||| || |||||||| |||||||||||| |||||||||| Sbjct: 715 gtgacggggaaggttttaatgaaatgtttcctttcgggaatgcctgatttgaagttgggg 774 Query: 653 cttaatgacaaaattggacttga 675 | ||||| |||||||| ||||| Sbjct: 775 ttgaatgataaaattggtcttga 797
>dbj|AP004118.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1148_D05 Length = 155146 Score = 151 bits (76), Expect = 4e-33 Identities = 100/108 (92%) Strand = Plus / Plus Query: 571 agggagtgttctacgatgtgatgtgacaggaaagattcttatgaagtgcttcctttctgg 630 ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| Sbjct: 1060 agggagtgttctacgatgtgatgtgactgggaagattcttatgaagtgcttcctttctgg 1119 Query: 631 aatgcctgatctgaagttgggacttaatgacaaaattggacttgaaaa 678 ||||||||||||||| |||||| | |||||||| || || |||||||| Sbjct: 1120 aatgcctgatctgaaattgggattaaatgacaagatcgggcttgaaaa 1167 Score = 115 bits (58), Expect = 2e-22 Identities = 85/94 (90%) Strand = Plus / Plus Query: 432 agccttcggataagccagttccaaatgcgaccctgcaagttactggcgctgttggttgga 491 ||||||| |||||||| ||||| ||||| || || ||||||||||| ||||||||||||| Sbjct: 498 agccttcagataagcctgttccgaatgccactctacaagttactggtgctgttggttgga 557 Query: 492 gaagagagggtcttgtgtacaagaagaatgaggt 525 |||||||||||||| ||||||||||||| ||||| Sbjct: 558 gaagagagggtcttatgtacaagaagaacgaggt 591 Score = 113 bits (57), Expect = 8e-22 Identities = 84/93 (90%) Strand = Plus / Plus Query: 246 aggcagtggccctcttcaagtcctactttggtggaacttttgatgaagatgctatcagga 305 |||||||||| || |||||||| ||||||||||| |||||||||||||||||||||| | Sbjct: 94 aggcagtggctcttttcaagtcatactttggtggtgcttttgatgaagatgctatcagaa 153 Query: 306 ataactttgtgttaatatacgagcttcttgatg 338 |||||||||| ||||| || ||||||||||||| Sbjct: 154 ataactttgttttaatctatgagcttcttgatg 186 Score = 89.7 bits (45), Expect = 1e-14 Identities = 81/93 (87%) Strand = Plus / Plus Query: 341 attatggacttcggttatcctcagaatctctcacctgaaattttgaagttatatataacc 400 ||||||||||||||||| ||||| || |||||||||||||| || || || |||||||| Sbjct: 285 attatggacttcggttaccctcaaaacctctcacctgaaatcttaaaattgtatataact 344 Query: 401 caggaaggcgtacgatcgccattttcctccaag 433 || ||||| || || |||||||||||||||||| Sbjct: 345 caagaaggagttcggtcgccattttcctccaag 377 Score = 79.8 bits (40), Expect = 1e-11 Identities = 49/52 (94%) Strand = Plus / Plus Query: 522 aggttttcttggacattgttgagagcgtaaaccttcttatgtcttctaaagg 573 |||||||||||||||||||||| || ||||| |||||||||||||||||||| Sbjct: 908 aggttttcttggacattgttgaaagtgtaaatcttcttatgtcttctaaagg 959
>gb|BT012777.1| Lycopersicon esculentum clone 113756F, mRNA sequence Length = 1877 Score = 135 bits (68), Expect = 2e-28 Identities = 200/244 (81%) Strand = Plus / Plus Query: 432 agccttcggataagccagttccaaatgcgaccctgcaagttactggcgctgttggttgga 491 |||||| |||||| ||||||||||| || || | ||||| || ||||||||||||||| Sbjct: 885 agcctttggataaaccagttccaaacgccacattacaagtcacgggcgctgttggttggc 944 Query: 492 gaagagagggtcttgtgtacaagaagaatgaggttttcttggacattgttgagagcgtaa 551 | || ||||||||||| || |||||||||||||| || |||| || || || || || | Sbjct: 945 gcagggagggtcttgtttataagaagaatgaggtgtttctggatatagtagaaagtgtta 1004 Query: 552 accttcttatgtcttctaaagggagtgttctacgatgtgatgtgacaggaaagattctta 611 | || ||||||||||| ||||| ||||| || || |||||||| || || || |||| | Sbjct: 1005 atctccttatgtcttcaaaaggtagtgtgctccgttgtgatgtaactgggaaagttctca 1064 Query: 612 tgaagtgcttcctttctggaatgcctgatctgaagttgggacttaatgacaaaattggac 671 |||| ||||| |||||||||||||||||| |||||||||| | ||||| |||||||| | Sbjct: 1065 tgaaatgctttctttctggaatgcctgatttgaagttggggttaaatgataaaattggtc 1124 Query: 672 ttga 675 |||| Sbjct: 1125 ttga 1128 Score = 133 bits (67), Expect = 8e-28 Identities = 232/287 (80%) Strand = Plus / Plus Query: 11 tacttcctcaaccttcgcggggacgtcctcatcaatcgcctataccgcgacgatgtcggg 70 ||||||||||| || || || || |||||||||||||| |||||||| ||||| |||||| Sbjct: 562 tacttcctcaatctccgtggcgatgtcctcatcaatcgtctataccgtgacgacgtcggg 621 Query: 71 ggaaatatggttgatgcattcaggatgcacattatgcaaacaaaagagcttggtacatgc 130 || |||||||| ||||| || ||||||| || ||||| |||||||| || || ||||| Sbjct: 622 ggtaatatggtagatgcctttcggatgcatataatgcagacaaaagaactcgggacatgt 681 Query: 131 cctgttcgacaaataggaggctgttccttcctttacatgaggatcagtaatgtttacatt 190 ||||| | || || ||||| || || ||| | |||||||| || || ||||| || ||| Sbjct: 682 cctgtcaggcagattggaggttgctctttcttctacatgagaattagcaatgtctatatt 741 Query: 191 gtgatcgtggttagcagcaatgctaatgtttcttgtgctttcaagtttgttgtggaggca 250 ||||| || ||||||| |||||| ||||| | ||||| ||||||||||| || ||||| Sbjct: 742 gtgattgtagttagcaccaatgcaaatgtcgcatgtgcattcaagtttgtggttgaggct 801 Query: 251 gtggccctcttcaagtcctactttggtggaacttttgatgaagatgc 297 || || || ||||| || || |||||||| ||||||| |||||||| Sbjct: 802 gttgcactattcaaatcttattttggtggttcttttgacgaagatgc 848
>emb|CR931738.1| Medicago truncatula chromosome 5 clone mth2-56k10, COMPLETE SEQUENCE Length = 132450 Score = 103 bits (52), Expect = 7e-19 Identities = 148/180 (82%) Strand = Plus / Plus Query: 69 ggggaaatatggttgatgcattcaggatgcacattatgcaaacaaaagagcttggtacat 128 ||||||||||||||||||| || ||| ||| || |||||||| ||||| |||||||| | Sbjct: 30181 ggggaaatatggttgatgcttttcggacgcatataatgcaaacgaaagaacttggtacct 30240 Query: 129 gccctgttcgacaaataggaggctgttccttcctttacatgaggatcagtaatgtttaca 188 | ||||| || || || || || || ||| |||||||||||||||| ||||| || | Sbjct: 30241 gtcctgtgaagcagattggtggatgctctttcttttacatgaggatcagcaatgtctata 30300 Query: 189 ttgtgatcgtggttagcagcaatgctaatgtttcttgtgctttcaagtttgttgtggagg 248 ||||||| || || || | |||||||||||| |||||||||||||||||||||| |||| Sbjct: 30301 ttgtgattgttgtcagtaccaatgctaatgtagcttgtgctttcaagtttgttgtagagg 30360 Score = 93.7 bits (47), Expect = 7e-16 Identities = 86/99 (86%) Strand = Plus / Plus Query: 577 tgttctacgatgtgatgtgacaggaaagattcttatgaagtgcttcctttctggaatgcc 636 |||||| || |||||||| || || |||||||||||||||||||| || ||||||||||| Sbjct: 33323 tgttctgcgctgtgatgtaacggggaagattcttatgaagtgctttctatctggaatgcc 33382 Query: 637 tgatctgaagttgggacttaatgacaaaattggacttga 675 |||| |||||||||| | |||||||| ||||| ||||| Sbjct: 33383 tgatttgaagttgggtttgaatgacaagattggccttga 33421 Score = 65.9 bits (33), Expect = 2e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 449 gttccaaatgcgaccctgcaagttactggcgctgttggttggagaagagagggtcttgtg 508 |||||||||||||| | |||||||| || |||||||||||| | ||||| || ||||| Sbjct: 33042 gttccaaatgcgacgttacaagttacgggtgctgttggttggcggagagaaggccttgta 33101 Query: 509 tacaagaagaatgaggt 525 ||||| ||||||||||| Sbjct: 33102 tacaaaaagaatgaggt 33118 Score = 40.1 bits (20), Expect = 9.3 Identities = 50/60 (83%) Strand = Plus / Plus Query: 11 tacttcctcaaccttcgcggggacgtcctcatcaatcgcctataccgcgacgatgtcggg 70 |||||| | ||||| || || ||||| ||||||||||| || || || |||||||||||| Sbjct: 29015 tacttcttgaacctccgtggtgacgttctcatcaatcgtctctatcgtgacgatgtcggg 29074
>gb|BT009612.1| Triticum aestivum clone wre1n.pk0104.c1:fis, full insert mRNA sequence Length = 789 Score = 87.7 bits (44), Expect = 4e-14 Identities = 63/68 (92%), Gaps = 1/68 (1%) Strand = Plus / Minus Query: 587 tgtgatgtgacaggaaagattcttatgaagtgcttcctttctggaatgcctgatctgaag 646 |||||||||||||||||||| || |||||||||||||||| |||||||||| |||||||| Sbjct: 380 tgtgatgtgacaggaaagatcctgatgaagtgcttcctttatggaatgcct-atctgaag 322 Query: 647 ttgggact 654 || ||||| Sbjct: 321 tttggact 314
>dbj|AB016882.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MZA15 Length = 79995 Score = 73.8 bits (37), Expect = 7e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 449 gttccaaatgcgaccctgcaagttactggcgctgttggttggagaagagagggtcttgtg 508 ||||||||||| || | |||||||| || ||||||||||||||||||||||| |||| Sbjct: 3576 gttccaaatgcaacattacaagttacaggtgctgttggttggagaagagagggccttgct 3635 Query: 509 tacaagaagaatgaggt 525 ||||| ||||||||||| Sbjct: 3636 tacaaaaagaatgaggt 3652 Score = 73.8 bits (37), Expect = 7e-10 Identities = 76/89 (85%) Strand = Plus / Plus Query: 338 gagattatggacttcggttatcctcagaatctctcacctgaaattttgaagttatatata 397 |||||||||||||| || ||||| || |||||||||||||||||||| || | ||||| Sbjct: 3312 gagattatggactttggctatccacaaaatctctcacctgaaattttaaaactttatatc 3371 Query: 398 acccaggaaggcgtacgatcgccattttc 426 || |||||||| ||||| || |||||||| Sbjct: 3372 actcaggaaggtgtacggtcaccattttc 3400 Score = 69.9 bits (35), Expect = 1e-08 Identities = 83/99 (83%) Strand = Plus / Plus Query: 577 tgttctacgatgtgatgtgacaggaaagattcttatgaagtgcttcctttctggaatgcc 636 |||||| || ||||||||||| || ||| || | ||||| || |||||||| |||||||| Sbjct: 3880 tgttcttcggtgtgatgtgacggggaaggttttaatgaaatgtttcctttcgggaatgcc 3939 Query: 637 tgatctgaagttgggacttaatgacaaaattggacttga 675 |||| |||||||||| | ||||| |||||||| ||||| Sbjct: 3940 tgatttgaagttggggttgaatgataaaattggtcttga 3978 Score = 63.9 bits (32), Expect = 6e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 260 ttcaagtcctactttggtggaacttttgatgaagatgctatcaggaataactttgt 315 ||||| || |||||||||||| ||||||||||||| ||||| || ||||||||||| Sbjct: 3110 ttcaaatcatactttggtggagcttttgatgaagacgctattagaaataactttgt 3165 Score = 48.1 bits (24), Expect = 0.038 Identities = 63/76 (82%) Strand = Plus / Plus Query: 173 atcagtaatgtttacattgtgatcgtggttagcagcaatgctaatgtttcttgtgctttc 232 ||||| ||||| ||||| || || || || || ||||||||||||||| |||||| ||| Sbjct: 2908 atcagcaatgtctacatcgtcattgttgtcagtagcaatgctaatgttgcttgtggattc 2967 Query: 233 aagtttgttgtggagg 248 || |||||||| |||| Sbjct: 2968 aaatttgttgttgagg 2983
>gb|AF544037.1| Arabidopsis thaliana polymorphic DNA fragment T80II60 Length = 521 Score = 69.9 bits (35), Expect = 1e-08 Identities = 71/83 (85%) Strand = Plus / Plus Query: 443 aagccagttccaaatgcgaccctgcaagttactggcgctgttggttggagaagagagggt 502 ||||| ||||||||||| || | |||||||| || ||||||||||||||||||||||| Sbjct: 186 aagcctgttccaaatgcaacattacaagttacgggtgctgttggttggagaagagagggc 245 Query: 503 cttgtgtacaagaagaatgaggt 525 |||| || || ||||||||||| Sbjct: 246 cttgcttataaaaagaatgaggt 268
>ref|NM_104761.3| Arabidopsis thaliana unknown protein AT1G60780 mRNA, complete cds Length = 1897 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 508 gtacaagaagaatgaggttttcttgga 534 ||||||||||||||| ||||||||||| Sbjct: 775 gtacaagaagaatgaagttttcttgga 801 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Plus Query: 306 ataactttgtgttaatatacgagcttcttgatgagattatggacttcggttatcctcag 364 ||||||||||| || | || ||||| ||||| ||||| |||||||| ||||| |||||| Sbjct: 597 ataactttgtggtagtgtatgagctacttgacgagatgatggactttggttaccctcag 655
>gb|AY099652.1| Arabidopsis thaliana clathrin adaptor medium chain protein MU1B, putative (At1g60780) mRNA, complete cds Length = 1690 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 508 gtacaagaagaatgaggttttcttgga 534 ||||||||||||||| ||||||||||| Sbjct: 694 gtacaagaagaatgaagttttcttgga 720 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Plus Query: 306 ataactttgtgttaatatacgagcttcttgatgagattatggacttcggttatcctcag 364 ||||||||||| || | || ||||| ||||| ||||| |||||||| ||||| |||||| Sbjct: 516 ataactttgtggtagtgtatgagctacttgacgagatgatggactttggttaccctcag 574
>gb|BT002144.1| Arabidopsis thaliana clathrin adaptor medium chain protein MU1B, putative (At1g60780) mRNA, complete cds Length = 1360 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 508 gtacaagaagaatgaggttttcttgga 534 ||||||||||||||| ||||||||||| Sbjct: 501 gtacaagaagaatgaagttttcttgga 527 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Plus Query: 306 ataactttgtgttaatatacgagcttcttgatgagattatggacttcggttatcctcag 364 ||||||||||| || | || ||||| ||||| ||||| |||||||| ||||| |||||| Sbjct: 323 ataactttgtggtagtgtatgagctacttgacgagatgatggactttggttaccctcag 381
>ref|NM_212577.1| Danio rerio zgc:85653 (zgc:85653), mRNA Length = 2045 Score = 44.1 bits (22), Expect = 0.59 Identities = 46/54 (85%) Strand = Plus / Plus Query: 298 tatcaggaataactttgtgttaatatacgagcttcttgatgagattatggactt 351 ||||| ||||||||||||| | || |||||| | || ||||||||| ||||||| Sbjct: 356 tatcaagaataactttgtgcttatctacgagttgctggatgagattctggactt 409
>gb|AC144428.1| Pan troglodytes BAC clone RP43-2C19 from 7, complete sequence Length = 208183 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 626 tctggaatgcctgatctgaagt 647 |||||||||||||||||||||| Sbjct: 37137 tctggaatgcctgatctgaagt 37158
>gb|BC067560.1| Danio rerio zgc:85653, mRNA (cDNA clone MGC:85653 IMAGE:6806683), complete cds Length = 2045 Score = 44.1 bits (22), Expect = 0.59 Identities = 46/54 (85%) Strand = Plus / Plus Query: 298 tatcaggaataactttgtgttaatatacgagcttcttgatgagattatggactt 351 ||||| ||||||||||||| | || |||||| | || ||||||||| ||||||| Sbjct: 356 tatcaagaataactttgtgcttatctacgagttgctggatgagattctggactt 409
>gb|AC145938.4| Pan troglodytes BAC clone RP43-18H20 from chromosome 7, complete sequence Length = 178210 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 626 tctggaatgcctgatctgaagt 647 |||||||||||||||||||||| Sbjct: 174051 tctggaatgcctgatctgaagt 174072
>gb|AC024083.3|AC024083 Homo sapiens chromosome 7 clone RP11-24I23, complete sequence Length = 152283 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 626 tctggaatgcctgatctgaagt 647 |||||||||||||||||||||| Sbjct: 108043 tctggaatgcctgatctgaagt 108064
>emb|CR933820.6| Zebrafish DNA sequence from clone DKEY-183J2 in linkage group 11, complete sequence Length = 230267 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 376 tgaaattttgaagttatatata 397 |||||||||||||||||||||| Sbjct: 111732 tgaaattttgaagttatatata 111753
>gb|BC056352.1| Mus musculus adaptor protein complex AP-2, mu1, mRNA (cDNA clone MGC:73445 IMAGE:6807694), complete cds Length = 1934 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Plus Query: 311 tttgtgttaatatacgagcttcttgatgagattatggactt 351 |||||| | ||||||||||| || ||||||||| ||||||| Sbjct: 448 tttgtgctcatatacgagctgctggatgagattctggactt 488
>ref|NM_009679.1| Mus musculus adaptor protein complex AP-2, mu1 (Ap2m1), mRNA Length = 2066 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Plus Query: 311 tttgtgttaatatacgagcttcttgatgagattatggactt 351 |||||| | ||||||||||| || ||||||||| ||||||| Sbjct: 454 tttgtgctcatatacgagctgctggatgagattctggactt 494
>gb|AC121905.3| Mus musculus BAC clone RP24-176A1 from chromosome 3, complete sequence Length = 178517 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 367 tctctcacctgaaattttgaa 387 ||||||||||||||||||||| Sbjct: 12061 tctctcacctgaaattttgaa 12081
>gb|AC161359.4| Mus musculus chromosome 3, clone RP24-244A19, complete sequence Length = 191289 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 367 tctctcacctgaaattttgaa 387 ||||||||||||||||||||| Sbjct: 156058 tctctcacctgaaattttgaa 156078 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 368 ctctcacctgaaattttgaa 387 |||||||||||||||||||| Sbjct: 32047 ctctcacctgaaattttgaa 32066
>gb|AC148291.22| Medicago truncatula clone mth2-14n3, complete sequence Length = 138853 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 204 gcagcaatgctaatgtttctt 224 ||||||||||||||||||||| Sbjct: 11261 gcagcaatgctaatgtttctt 11281
>emb|AL157933.19| Human DNA sequence from clone RP11-395L12 on chromosome Xq21.1-21.33, complete sequence Length = 48768 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 501 gtcttgtgtacaagaagaatgaggt 525 ||||||||| ||||||||||||||| Sbjct: 14013 gtcttgtgtccaagaagaatgaggt 14037
>emb|AL035465.4|HS197K23 Human DNA sequence from clone RP1-197K23 on chromosome 6q22.2-23.3 Contains part of the PTPRK gene for protein tyrosine phosphatase receptor type K (R-PTP-KAPPA) and the 5' end of a novel gene, complete sequence Length = 48634 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 291 aagatgctatcaggaataact 311 ||||||||||||||||||||| Sbjct: 26003 aagatgctatcaggaataact 26023
>gb|BT009619.1| Triticum aestivum clone wre1n.pk0123.c3:fis, full insert mRNA sequence Length = 1508 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 332 cttgatgagattatggacttcggttatcc 360 ||||||||||| ||||||||||| ||||| Sbjct: 165 cttgatgagatgatggacttcgggtatcc 193 Score = 40.1 bits (20), Expect = 9.3 Identities = 44/52 (84%) Strand = Plus / Plus Query: 508 gtacaagaagaatgaggttttcttggacattgttgagagcgtaaaccttctt 559 ||||||||||||||| || |||||||| | |||||||| || ||| ||||| Sbjct: 317 gtacaagaagaatgaagtgttcttggatgtggttgagagtgtcaacattctt 368
>emb|AL626785.26| Mouse DNA sequence from clone RP23-220F20 on chromosome 11 Contains a novel gene, the 3' end of the Mmd gene for monocyte to macrophage differentiation-associated and the 3' end of the Hlf gene for hepatic leukemia factor, complete sequence Length = 172696 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 628 tggaatgcctgatctgaagtt 648 ||||||||||||||||||||| Sbjct: 25221 tggaatgcctgatctgaagtt 25241
>gb|AC160758.3| Mus musculus chromosome 3, clone RP24-215I16, complete sequence Length = 42147 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 367 tctctcacctgaaattttgaa 387 ||||||||||||||||||||| Sbjct: 19897 tctctcacctgaaattttgaa 19877
>gb|BC089342.1| Mus musculus adaptor protein complex AP-2, mu1, mRNA (cDNA clone MGC:102136 IMAGE:30538471), complete cds Length = 1915 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Plus Query: 311 tttgtgttaatatacgagcttcttgatgagattatggactt 351 |||||| | ||||||||||| || ||||||||| ||||||| Sbjct: 441 tttgtgctcatatacgagctgctggatgagattctggactt 481
>dbj|AK141862.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length enriched library, clone:D130035H06 product:adaptor protein complex AP-2, mu1, full insert sequence Length = 2869 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Plus Query: 311 tttgtgttaatatacgagcttcttgatgagattatggactt 351 |||||| | ||||||||||| || ||||||||| ||||||| Sbjct: 409 tttgtgctcatatacgagctgctggatgagattctggactt 449
>dbj|AK143586.1| Mus musculus 6 days neonate spleen cDNA, RIKEN full-length enriched library, clone:F420010K16 product:adaptor protein complex AP-2, mu1, full insert sequence Length = 1811 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Plus Query: 311 tttgtgttaatatacgagcttcttgatgagattatggactt 351 |||||| | ||||||||||| || ||||||||| ||||||| Sbjct: 424 tttgtgctcatatacgagctgctggatgagattctggactt 464
>dbj|AK146517.1| Mus musculus 17 days embryo heart cDNA, RIKEN full-length enriched library, clone:I920019I09 product:adaptor protein complex AP-2, mu1, full insert sequence Length = 2080 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Plus Query: 311 tttgtgttaatatacgagcttcttgatgagattatggactt 351 |||||| | ||||||||||| || ||||||||| ||||||| Sbjct: 478 tttgtgctcatatacgagctgctggatgagattctggactt 518
>dbj|AK150358.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830005F01 product:adaptor protein complex AP-2, mu1, full insert sequence Length = 1098 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Plus Query: 311 tttgtgttaatatacgagcttcttgatgagattatggactt 351 |||||| | ||||||||||| || ||||||||| ||||||| Sbjct: 445 tttgtgctcatatacgagctgctggatgagattctggactt 485
>dbj|AK168414.1| Mus musculus 17 days embryo stomach cDNA, RIKEN full-length enriched library, clone:I920012N21 product:adaptor protein complex AP-2, mu1, full insert sequence Length = 1911 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Plus Query: 311 tttgtgttaatatacgagcttcttgatgagattatggactt 351 |||||| | ||||||||||| || ||||||||| ||||||| Sbjct: 455 tttgtgctcatatacgagctgctggatgagattctggactt 495
>dbj|AK159534.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420023G04 product:adaptor protein complex AP-2, mu1, full insert sequence Length = 1906 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Plus Query: 311 tttgtgttaatatacgagcttcttgatgagattatggactt 351 |||||| | ||||||||||| || ||||||||| ||||||| Sbjct: 456 tttgtgctcatatacgagctgctggatgagattctggactt 496
>gb|AC024166.3|AC024166 Homo sapiens chromosome 3 clone RP11-429F16 map 3p, complete sequence Length = 174868 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 501 gtcttgtgtacaagaagaatgaggt 525 ||||||||| ||||||||||||||| Sbjct: 7420 gtcttgtgtccaagaagaatgaggt 7396
>dbj|AK172889.1| Mus musculus mRNA for mKIAA0109 protein Length = 2007 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Plus Query: 311 tttgtgttaatatacgagcttcttgatgagattatggactt 351 |||||| | ||||||||||| || ||||||||| ||||||| Sbjct: 409 tttgtgctcatatacgagctgctggatgagattctggactt 449
>gb|AC004765.2| Homo sapiens 12 BAC RPCI11-388A16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 150812 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 378 aaattttgaagttatatataa 398 ||||||||||||||||||||| Sbjct: 42030 aaattttgaagttatatataa 42050
>gb|AC079816.31| Mus musculus strain C57BL/6J chromosome 11 clone rp23-220f20, complete sequence Length = 172680 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 628 tggaatgcctgatctgaagtt 648 ||||||||||||||||||||| Sbjct: 25290 tggaatgcctgatctgaagtt 25310
>emb|BX546465.7| Mouse DNA sequence from clone RP23-167N13 on chromosome 2, complete sequence Length = 81064 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Plus Query: 311 tttgtgttaatatacgagcttcttgatgagattatggactt 351 |||||| | ||||||||||| || ||||||||| ||||||| Sbjct: 23870 tttgtgctcatatacgagctgctggatgagattctggactt 23910
>dbj|BS000165.1| Pan troglodytes chromosome 22 clone:PTB-057B23, map 22, complete sequences Length = 142215 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 557 cttatgtcttctaaagggagt 577 ||||||||||||||||||||| Sbjct: 85596 cttatgtcttctaaagggagt 85616
>gb|AC172623.3| Mus musculus chromosome 8, clone RP23-478A9, complete sequence Length = 182316 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Minus Query: 311 tttgtgttaatatacgagcttcttgatgagattatggactt 351 |||||| | ||||||||||| || ||||||||| ||||||| Sbjct: 63881 tttgtgctcatatacgagctgctggatgagattctggactt 63841
>gb|U27106.1|MMU27106 Mus musculus clathrin-associated AP-2 complex AP50 subunit mRNA, complete cds Length = 2066 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Plus Query: 311 tttgtgttaatatacgagcttcttgatgagattatggactt 351 |||||| | ||||||||||| || ||||||||| ||||||| Sbjct: 454 tttgtgctcatatacgagctgctggatgagattctggactt 494
>gb|BC094510.1| Mus musculus adaptor protein complex AP-2, mu1, mRNA (cDNA clone MGC:106373 IMAGE:6313261), complete cds Length = 1971 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Plus Query: 311 tttgtgttaatatacgagcttcttgatgagattatggactt 351 |||||| | ||||||||||| || ||||||||| ||||||| Sbjct: 438 tttgtgctcatatacgagctgctggatgagattctggactt 478
>gb|AC066580.4| Homo sapiens chromosome 3 clone RP11-109J15 map 3p, complete sequence Length = 149252 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 501 gtcttgtgtacaagaagaatgaggt 525 ||||||||| ||||||||||||||| Sbjct: 118475 gtcttgtgtccaagaagaatgaggt 118451
>ref|NM_192230.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1290 Score = 40.1 bits (20), Expect = 9.3 Identities = 44/52 (84%) Strand = Plus / Plus Query: 508 gtacaagaagaatgaggttttcttggacattgttgagagcgtaaaccttctt 559 ||||||||||||||| || |||||||| |||| ||||| || ||| ||||| Sbjct: 504 gtacaagaagaatgaagtgttcttggatgttgtggagagtgttaacattctt 555
>gb|AF106564.3| Homo sapiens chromosome 8 clone GS1-72M22 map p21.2, complete sequence Length = 143212 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 502 tcttgtgtacaagaagaatgaggt 525 ||||||||||| |||||||||||| Sbjct: 128721 tcttgtgtacaggaagaatgaggt 128698
>emb|CT010587.5| Mouse DNA sequence from clone RP23-307A6 on chromosome 17, complete sequence Length = 173949 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 97 gcacattatgcaaacaaaag 116 |||||||||||||||||||| Sbjct: 67582 gcacattatgcaaacaaaag 67601
>gb|AF412336.1| Branchiostoma floridae amphiCASP-6 mRNA, complete cds Length = 2451 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 327 agcttcttgatgagattatg 346 |||||||||||||||||||| Sbjct: 2238 agcttcttgatgagattatg 2257
>ref|XM_651168.1| Entamoeba histolytica HM-1:IMSS GS1 protein (15.t00060) partial mRNA Length = 690 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 cttcctttacatgaggatca 176 |||||||||||||||||||| Sbjct: 445 cttcctttacatgaggatca 426
>gb|AC146274.2| Pan troglodytes BAC clone RP43-29I24 from 7, complete sequence Length = 51473 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 acttttgatgaagatgctat 300 |||||||||||||||||||| Sbjct: 19850 acttttgatgaagatgctat 19869
>gb|AC004942.1| Homo sapiens PAC clone RP5-981B16 from 7, complete sequence Length = 76079 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 acttttgatgaagatgctat 300 |||||||||||||||||||| Sbjct: 25134 acttttgatgaagatgctat 25153
>emb|AJ011849.1|BSU011483 Bacillus subtilis fenD gene Length = 7774 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 211 tgctaatgtttcttgtgctttcaa 234 ||||||||||||||| |||||||| Sbjct: 4951 tgctaatgtttcttgcgctttcaa 4928
>emb|AL359914.14| Human DNA sequence from clone RP11-637B23 on chromosome X Contains a H3 histone, family 3B (H3F3B) pseudogene, the BMP15 gene for bone morphogenetic protein 15, and a high-mobility group box 1 (HMGB1) pseudogene, complete sequence Length = 125495 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 501 gtcttgtgtacaagaagaatgagg 524 ||||||||| |||||||||||||| Sbjct: 38555 gtcttgtgtccaagaagaatgagg 38578
>gb|AC163436.3| Mus musculus chromosome 1, clone RP23-102H12, complete sequence Length = 198253 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 587 tgtgatgtgacaggaaagat 606 |||||||||||||||||||| Sbjct: 30438 tgtgatgtgacaggaaagat 30457
>gb|AC117452.2| Homo sapiens 3 BAC RP11-341J3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 193285 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 379 aattttgaagttatatataa 398 |||||||||||||||||||| Sbjct: 171721 aattttgaagttatatataa 171740
>gb|DQ167724.1| Drosophila orena putative clathrin-associated protein (AP-50) gene, complete cds Length = 1813 Score = 40.1 bits (20), Expect = 9.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 299 atcaggaataactttgtgttaatatacgagcttcttgatgagat 342 |||| ||||||||| ||| | || ||||||||||| |||||||| Sbjct: 704 atcaagaataacttcgtgctcatctacgagcttctggatgagat 747
>gb|DQ167723.1| Drosophila erecta putative clathrin-associated protein (AP-50) gene, complete cds Length = 1513 Score = 40.1 bits (20), Expect = 9.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 299 atcaggaataactttgtgttaatatacgagcttcttgatgagat 342 |||| ||||||||| ||| | || ||||||||||| |||||||| Sbjct: 399 atcaagaataacttcgtgctcatctacgagcttctggatgagat 442
>gb|AC119729.5| Homo sapiens 3 BAC RP11-36I16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 125847 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 379 aattttgaagttatatataa 398 |||||||||||||||||||| Sbjct: 30799 aattttgaagttatatataa 30818
>gb|AC105359.3| Homo sapiens chromosome 8, clone XX-224N20, complete sequence Length = 122274 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 502 tcttgtgtacaagaagaatgaggt 525 ||||||||||| |||||||||||| Sbjct: 76266 tcttgtgtacaggaagaatgaggt 76243
>gb|AC021000.9| Homo sapiens chromosome 8, clone RP11-381I2, complete sequence Length = 192592 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 502 tcttgtgtacaagaagaatgaggt 525 ||||||||||| |||||||||||| Sbjct: 182643 tcttgtgtacaggaagaatgaggt 182620
>emb|BX897661.7| Zebrafish DNA sequence from clone DKEY-261N7 in linkage group 7, complete sequence Length = 157216 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 aatgctaatgtttcttgtgc 228 |||||||||||||||||||| Sbjct: 108024 aatgctaatgtttcttgtgc 108043
>emb|BX088559.18| Zebrafish DNA sequence from clone DKEY-238P16 in linkage group 7, complete sequence Length = 159610 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 aatgctaatgtttcttgtgc 228 |||||||||||||||||||| Sbjct: 121521 aatgctaatgtttcttgtgc 121540
>gb|AC011372.7| Homo sapiens chromosome 5 clone CTB-108B20, complete sequence Length = 183330 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 489 ggagaagagagggtcttgtg 508 |||||||||||||||||||| Sbjct: 98921 ggagaagagagggtcttgtg 98902
>gb|AF255311.1|AF255311 Drosophila yakuba clathrin adaptor protein AP50 (AP-50) gene, partial cds Length = 1399 Score = 40.1 bits (20), Expect = 9.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 299 atcaggaataactttgtgttaatatacgagcttcttgatgagat 342 |||| ||||||||||||| | || |||||||| || |||||||| Sbjct: 360 atcaagaataactttgtgctcatctacgagctgctggatgagat 403
>gb|AC000055.1|HSAC000055 Human PAC clone DJ073F11 from Xq23, complete sequence Length = 93578 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 243 tggaggcagtggccctcttc 262 |||||||||||||||||||| Sbjct: 85799 tggaggcagtggccctcttc 85818
>dbj|AK065538.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013030K02, full insert sequence Length = 1892 Score = 40.1 bits (20), Expect = 9.3 Identities = 44/52 (84%) Strand = Plus / Plus Query: 508 gtacaagaagaatgaggttttcttggacattgttgagagcgtaaaccttctt 559 ||||||||||||||| || |||||||| |||| ||||| || ||| ||||| Sbjct: 747 gtacaagaagaatgaagtgttcttggatgttgtggagagtgttaacattctt 798
>gb|AC154790.2| Mus musculus BAC clone RP24-481A4 from 17, complete sequence Length = 194675 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 97 gcacattatgcaaacaaaag 116 |||||||||||||||||||| Sbjct: 38631 gcacattatgcaaacaaaag 38650
>emb|BX088722.8| Zebrafish DNA sequence from clone CH211-253P18 in linkage group 20, complete sequence Length = 195359 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 aatgctaatgtttcttgtgc 228 |||||||||||||||||||| Sbjct: 12892 aatgctaatgtttcttgtgc 12911
>dbj|AK060762.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-A04, full insert sequence Length = 1867 Score = 40.1 bits (20), Expect = 9.3 Identities = 44/52 (84%) Strand = Plus / Plus Query: 508 gtacaagaagaatgaggttttcttggacattgttgagagcgtaaaccttctt 559 ||||||||||||||| || |||||||| |||| ||||| || ||| ||||| Sbjct: 737 gtacaagaagaatgaagtgttcttggatgttgtggagagtgttaacattctt 788
>gb|AC133209.4| Mus musculus BAC clone RP23-21E5 from chromosome 3, complete sequence Length = 164837 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 72 gaaatatggttgatgcattcagga 95 ||||||||||| |||||||||||| Sbjct: 67408 gaaatatggttaatgcattcagga 67431
>gb|AC173211.3| Gallus gallus BAC clone CH261-2F13 from chromosome ul, complete sequence Length = 204791 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 488 tggagaagagagggtcttgt 507 |||||||||||||||||||| Sbjct: 149418 tggagaagagagggtcttgt 149399
>gb|AC155272.3| Mus musculus BAC clone RP23-79N13 from chromosome 13, complete sequence Length = 213306 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 373 acctgaaattttgaagttatatat 396 ||||||||||||||| |||||||| Sbjct: 62267 acctgaaattttgaaattatatat 62244
>emb|AL122023.3|CNS01DSX Human chromosome 14 DNA sequence BAC R-120E11 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 171375 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 tgcattcaggatgcacatta 104 |||||||||||||||||||| Sbjct: 157152 tgcattcaggatgcacatta 157171
>gb|AC152069.4| Mus musculus chromosome 3, clone RP24-403D5, complete sequence Length = 185511 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 368 ctctcacctgaaattttgaa 387 |||||||||||||||||||| Sbjct: 40053 ctctcacctgaaattttgaa 40034
>emb|CT033752.6| Mouse DNA sequence from clone RP23-140I20 on chromosome 17, complete sequence Length = 216455 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 97 gcacattatgcaaacaaaag 116 |||||||||||||||||||| Sbjct: 9244 gcacattatgcaaacaaaag 9263 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,390,160 Number of Sequences: 3902068 Number of extensions: 6390160 Number of successful extensions: 124546 Number of sequences better than 10.0: 85 Number of HSP's better than 10.0 without gapping: 85 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 124318 Number of HSP's gapped (non-prelim): 219 length of query: 678 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 655 effective length of database: 17,143,297,704 effective search space: 11228859996120 effective search space used: 11228859996120 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
