ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal9j03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|L28008.1|WHTWALI Triticum aestivum (wali7) mRNA, 3' end, part... 276 3e-71
2gb|AY106409.1| Zea mays PCO130569 mRNA sequence 82 9e-13
3dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 72 9e-10
4dbj|AK119185.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 9e-10
5dbj|AK104445.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 9e-10
6dbj|AK071762.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 9e-10
7gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 72 9e-10
8emb|BX000499.1|CNS08CDP Oryza sativa chromosome 11, . BAC OSJNBa... 72 9e-10
9gb|BT016691.1| Zea mays clone Contig524 mRNA sequence 68 1e-08
10dbj|AK104347.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 1e-05
11dbj|AK104102.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 1e-05
12dbj|AK067141.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 1e-05
13gb|DQ107223.1| Astragalus brandegei clone 5 aluminum-induced pro... 44 0.19
14gb|DQ107222.1| Astragalus brandegei clone 6 aluminum-induced pro... 44 0.19
15gb|DQ107191.1| Astragalus falcatus clone 3 aluminum-induced prot... 44 0.19
16gb|DQ107190.1| Astragalus falcatus clone 2 aluminum-induced prot... 44 0.19
17gb|DQ107189.1| Astragalus falcatus clone 12 aluminum-induced pro... 44 0.19
18gb|DQ107188.1| Astragalus falcatus clone 11 aluminum-induced pro... 44 0.19
19gb|DQ107187.1| Astragalus falcatus clone 10 aluminum-induced pro... 44 0.19
20gb|DQ107178.1| Astragalus lonchocarpus clone 19 aluminum-induced... 44 0.19
21gb|DQ107177.1| Astragalus lonchocarpus clone 24 aluminum-induced... 44 0.19
22gb|DQ107176.1| Astragalus ceramicus clone 6 aluminum-induced pro... 44 0.19
23gb|DQ107175.1| Astragalus ceramicus clone 3 aluminum-induced pro... 44 0.19
24gb|DQ107174.1| Astragalus ceramicus clone 2 aluminum-induced pro... 44 0.19
25gb|DQ107171.1| Astragalus tetrapterus clone 21 aluminum-induced ... 44 0.19
26gb|DQ107170.1| Astragalus tetrapterus clone 20 aluminum-induced ... 44 0.19
27dbj|AP006689.1| Lotus japonicus genomic DNA, chromosome 4, clone... 44 0.19
28emb|Z99976.1|MAZ99976 Musa acuminata mRNA for putative WALI7-rel... 42 0.76
29dbj|AB012110.1| Vigna radiata mRNA for ARG10, complete cds 42 0.76
30dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.0
31gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 3.0
32emb|AL928756.4|CNS08CBT Oryza sativa chromosome 12, . BAC OSJNBb... 40 3.0
33dbj|AP004960.1| Lotus japonicus genomic DNA, chromosome 6, clone... 40 3.0

>gb|L28008.1|WHTWALI Triticum aestivum (wali7) mRNA, 3' end, partial cds
          Length = 956

 Score =  276 bits (139), Expect = 3e-71
 Identities = 193/214 (90%), Gaps = 1/214 (0%)
 Strand = Plus / Minus

                                                                       
Query: 22  agagtagcacacgcgccttgttgcattatnttanaccaccaccacctacacacgaccggn 81
           ||||||||||||||||||||||||||||| ||| |||||||||| |||||||||| ||| 
Sbjct: 808 agagtagcacacgcgccttgttgcattatattacaccaccaccatctacacacgaacggc 749

                                                                       
Query: 82  gttgcctgctttgcccagcgacggnnacgagagaanntnctactgaagtgccgnnagaac 141
           |||||||||||||||||||||| |  ||| |||||  | ||||||||||||||  | |||
Sbjct: 748 gttgcctgctttgcccagcgacagagacgggagaatctcctactgaagtgccgcgacaac 689

                                                                       
Query: 142 ggtngatccttccaccatgaaggttgcaccacagatttcctcctcatntgcaggcacagc 201
           ||| ||||||||||||||||||| ||||||||| ||||||||||||| ||||||||||||
Sbjct: 688 ggtagatccttccaccatgaagg-tgcaccacatatttcctcctcatctgcaggcacagc 630

                                             
Query: 202 ggtcaccttgttcttgggattctcgtacnacttg 235
           ||| |||||||||||||||||||||||| |||||
Sbjct: 629 ggtgaccttgttcttgggattctcgtacgacttg 596



to top

>gb|AY106409.1| Zea mays PCO130569 mRNA sequence
          Length = 1186

 Score = 81.8 bits (41), Expect = 9e-13
 Identities = 70/80 (87%)
 Strand = Plus / Minus

                                                                       
Query: 149 ccttccaccatgaaggttgcaccacagatttcctcctcatntgcaggcacagcggtcacc 208
           |||||||||  ||||||||| || |||||||||||||| | |||||| || || ||||| 
Sbjct: 768 ccttccacctggaaggttgcgccgcagatttcctcctcgtttgcaggaacggcagtcact 709

                               
Query: 209 ttgttcttgggattctcgta 228
           ||||||||||||||||||||
Sbjct: 708 ttgttcttgggattctcgta 689



to top

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 71.9 bits (36), Expect = 9e-10
 Identities = 59/67 (88%)
 Strand = Plus / Plus

                                                                           
Query: 159     tgaaggttgcaccacagatttcctcctcatntgcaggcacagcggtcaccttgttcttgg 218
               ||||||||||||||||||| || || |||| |||||| ||||| |||||||||||||| |
Sbjct: 2187475 tgaaggttgcaccacagatctcttcttcatttgcaggaacagcagtcaccttgttctttg 2187534

                      
Query: 219     gattctc 225
               | |||||
Sbjct: 2187535 ggttctc 2187541



to top

>dbj|AK119185.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-G04, full
           insert sequence
          Length = 1135

 Score = 71.9 bits (36), Expect = 9e-10
 Identities = 59/67 (88%)
 Strand = Plus / Minus

                                                                       
Query: 159 tgaaggttgcaccacagatttcctcctcatntgcaggcacagcggtcaccttgttcttgg 218
           ||||||||||||||||||| || || |||| |||||| ||||| |||||||||||||| |
Sbjct: 887 tgaaggttgcaccacagatctcttcttcatttgcaggaacagcagtcaccttgttctttg 828

                  
Query: 219 gattctc 225
           | |||||
Sbjct: 827 ggttctc 821



to top

>dbj|AK104445.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-B05, full
           insert sequence
          Length = 1124

 Score = 71.9 bits (36), Expect = 9e-10
 Identities = 59/67 (88%)
 Strand = Plus / Minus

                                                                       
Query: 159 tgaaggttgcaccacagatttcctcctcatntgcaggcacagcggtcaccttgttcttgg 218
           ||||||||||||||||||| || || |||| |||||| ||||| |||||||||||||| |
Sbjct: 887 tgaaggttgcaccacagatctcttcttcatttgcaggaacagcagtcaccttgttctttg 828

                  
Query: 219 gattctc 225
           | |||||
Sbjct: 827 ggttctc 821



to top

>dbj|AK071762.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023109H06, full
           insert sequence
          Length = 1136

 Score = 71.9 bits (36), Expect = 9e-10
 Identities = 59/67 (88%)
 Strand = Plus / Minus

                                                                       
Query: 159 tgaaggttgcaccacagatttcctcctcatntgcaggcacagcggtcaccttgttcttgg 218
           ||||||||||||||||||| || || |||| |||||| ||||| |||||||||||||| |
Sbjct: 888 tgaaggttgcaccacagatctcttcttcatttgcaggaacagcagtcaccttgttctttg 829

                  
Query: 219 gattctc 225
           | |||||
Sbjct: 828 ggttctc 822



to top

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 71.9 bits (36), Expect = 9e-10
 Identities = 59/67 (88%)
 Strand = Plus / Plus

                                                                           
Query: 159     tgaaggttgcaccacagatttcctcctcatntgcaggcacagcggtcaccttgttcttgg 218
               ||||||||||||||||||| || || |||| |||||| ||||| |||||||||||||| |
Sbjct: 2195256 tgaaggttgcaccacagatctcttcttcatttgcaggaacagcagtcaccttgttctttg 2195315

                      
Query: 219     gattctc 225
               | |||||
Sbjct: 2195316 ggttctc 2195322



to top

>emb|BX000499.1|CNS08CDP Oryza sativa chromosome 11, . BAC OSJNBa0039D03 of library OSJNBa from
             chromosome 11 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 125593

 Score = 71.9 bits (36), Expect = 9e-10
 Identities = 59/67 (88%)
 Strand = Plus / Plus

                                                                         
Query: 159   tgaaggttgcaccacagatttcctcctcatntgcaggcacagcggtcaccttgttcttgg 218
             ||||||||||||||||||| || || |||| |||||| ||||| |||||||||||||| |
Sbjct: 84169 tgaaggttgcaccacagatctcttcttcatttgcaggaacagcagtcaccttgttctttg 84228

                    
Query: 219   gattctc 225
             | |||||
Sbjct: 84229 ggttctc 84235



to top

>gb|BT016691.1| Zea mays clone Contig524 mRNA sequence
          Length = 1198

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 69/81 (85%)
 Strand = Plus / Plus

                                                                       
Query: 148 tccttccaccatgaaggttgcaccacagatttcctcctcatntgcaggcacagcggtcac 207
           ||||||||||  ||||| ||| || || ||||||||||| | |||||| || || |||||
Sbjct: 424 tccttccacctggaagggtgcgccgcaaatttcctcctcgtttgcaggaacggcagtcac 483

                                
Query: 208 cttgttcttgggattctcgta 228
            ||||||||||||||||||||
Sbjct: 484 tttgttcttgggattctcgta 504



to top

>dbj|AK104347.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-F10, full
           insert sequence
          Length = 1101

 Score = 58.0 bits (29), Expect = 1e-05
 Identities = 67/80 (83%)
 Strand = Plus / Minus

                                                                       
Query: 146 gatccttccaccatgaaggttgcaccacagatttcctcctcatntgcaggcacagcggtc 205
           |||||||||||| ||||||||||||| || ||||| || || |  ||||| || ||||||
Sbjct: 854 gatccttccaccttgaaggttgcaccgcaaatttcttcttctttggcaggaactgcggtc 795

                               
Query: 206 accttgttcttgggattctc 225
           ||||||| ||| || |||||
Sbjct: 794 accttgtgctttgggttctc 775



to top

>dbj|AK104102.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-B06, full
           insert sequence
          Length = 1099

 Score = 58.0 bits (29), Expect = 1e-05
 Identities = 67/80 (83%)
 Strand = Plus / Minus

                                                                       
Query: 146 gatccttccaccatgaaggttgcaccacagatttcctcctcatntgcaggcacagcggtc 205
           |||||||||||| ||||||||||||| || ||||| || || |  ||||| || ||||||
Sbjct: 866 gatccttccaccttgaaggttgcaccgcaaatttcttcttctttggcaggaactgcggtc 807

                               
Query: 206 accttgttcttgggattctc 225
           ||||||| ||| || |||||
Sbjct: 806 accttgtgctttgggttctc 787



to top

>dbj|AK067141.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013095J21, full
           insert sequence
          Length = 1130

 Score = 58.0 bits (29), Expect = 1e-05
 Identities = 67/80 (83%)
 Strand = Plus / Minus

                                                                       
Query: 146 gatccttccaccatgaaggttgcaccacagatttcctcctcatntgcaggcacagcggtc 205
           |||||||||||| ||||||||||||| || ||||| || || |  ||||| || ||||||
Sbjct: 867 gatccttccaccttgaaggttgcaccgcaaatttcttcttctttggcaggaactgcggtc 808

                               
Query: 206 accttgttcttgggattctc 225
           ||||||| ||| || |||||
Sbjct: 807 accttgtgctttgggttctc 788



to top

>gb|DQ107223.1| Astragalus brandegei clone 5 aluminum-induced protein-like gene,
           partial sequence
          Length = 327

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 161 aaggttgcaccacagatttcctcctcatntgcaggcacagc 201
           |||||||| || ||||||||||| ||||  |||||||||||
Sbjct: 160 aaggttgcgccccagatttcctcatcattagcaggcacagc 200



to top

>gb|DQ107222.1| Astragalus brandegei clone 6 aluminum-induced protein-like gene,
           partial sequence
          Length = 320

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 161 aaggttgcaccacagatttcctcctcatntgcaggcacagc 201
           |||||||| || ||||||||||| ||||  |||||||||||
Sbjct: 152 aaggttgcgccccagatttcctcatcattagcaggcacagc 192



to top

>gb|DQ107191.1| Astragalus falcatus clone 3 aluminum-induced protein-like gene,
           partial sequence
          Length = 332

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 161 aaggttgcaccacagatttcctcctcatntgcaggcacagc 201
           |||||||| || ||||||||||| ||||  |||||||||||
Sbjct: 167 aaggttgcgccccagatttcctcatcattagcaggcacagc 207



to top

>gb|DQ107190.1| Astragalus falcatus clone 2 aluminum-induced protein-like gene,
           partial sequence
          Length = 332

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 161 aaggttgcaccacagatttcctcctcatntgcaggcacagc 201
           |||||||| || ||||||||||| ||||  |||||||||||
Sbjct: 167 aaggttgcgccccagatttcctcatcattagcaggcacagc 207



to top

>gb|DQ107189.1| Astragalus falcatus clone 12 aluminum-induced protein-like gene,
           partial sequence
          Length = 332

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 161 aaggttgcaccacagatttcctcctcatntgcaggcacagc 201
           |||||||| || ||||||||||| ||||  |||||||||||
Sbjct: 167 aaggttgcgccccagatttcctcatcattagcaggcacagc 207



to top

>gb|DQ107188.1| Astragalus falcatus clone 11 aluminum-induced protein-like gene,
           partial sequence
          Length = 332

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 161 aaggttgcaccacagatttcctcctcatntgcaggcacagc 201
           |||||||| || ||||||||||| ||||  |||||||||||
Sbjct: 167 aaggttgcgccccagatttcctcatcattagcaggcacagc 207



to top

>gb|DQ107187.1| Astragalus falcatus clone 10 aluminum-induced protein-like gene,
           partial sequence
          Length = 331

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 161 aaggttgcaccacagatttcctcctcatntgcaggcacagc 201
           |||||||| || ||||||||||| ||||  |||||||||||
Sbjct: 167 aaggttgcgccccagatttcctcatcattagcaggcacagc 207



to top

>gb|DQ107178.1| Astragalus lonchocarpus clone 19 aluminum-induced protein-like
           gene, partial sequence
          Length = 338

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 161 aaggttgcaccacagatttcctcctcatntgcaggcacagc 201
           |||||||| || ||||||||||| ||||  |||||||||||
Sbjct: 172 aaggttgcgccccagatttcctcatcattagcaggcacagc 212



to top

>gb|DQ107177.1| Astragalus lonchocarpus clone 24 aluminum-induced protein-like
           gene, partial sequence
          Length = 335

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 161 aaggttgcaccacagatttcctcctcatntgcaggcacagc 201
           |||||||| || ||||||||||| ||||  |||||||||||
Sbjct: 172 aaggttgcgccccagatttcctcatcattagcaggcacagc 212



to top

>gb|DQ107176.1| Astragalus ceramicus clone 6 aluminum-induced protein-like gene,
           partial sequence
          Length = 334

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 161 aaggttgcaccacagatttcctcctcatntgcaggcacagc 201
           |||||||| || ||||||||||| ||||  |||||||||||
Sbjct: 172 aaggttgcgccccagatttcctcatcattagcaggcacagc 212



to top

>gb|DQ107175.1| Astragalus ceramicus clone 3 aluminum-induced protein-like gene,
           partial sequence
          Length = 334

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 161 aaggttgcaccacagatttcctcctcatntgcaggcacagc 201
           |||||||| || ||||||||||| ||||  |||||||||||
Sbjct: 172 aaggttgcgccccagatttcctcatcattagcaggcacagc 212



to top

>gb|DQ107174.1| Astragalus ceramicus clone 2 aluminum-induced protein-like gene,
           partial sequence
          Length = 335

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 161 aaggttgcaccacagatttcctcctcatntgcaggcacagc 201
           |||||||| || ||||||||||| ||||  |||||||||||
Sbjct: 172 aaggttgcgccccagatttcctcatcattagcaggcacagc 212



to top

>gb|DQ107171.1| Astragalus tetrapterus clone 21 aluminum-induced protein-like gene,
           partial sequence
          Length = 336

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 161 aaggttgcaccacagatttcctcctcatntgcaggcacagc 201
           |||||||| || ||||||||||| ||||  |||||||||||
Sbjct: 172 aaggttgcgccccagatttcctcatcattagcaggcacagc 212



to top

>gb|DQ107170.1| Astragalus tetrapterus clone 20 aluminum-induced protein-like gene,
           partial sequence
          Length = 337

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 161 aaggttgcaccacagatttcctcctcatntgcaggcacagc 201
           |||||||| || ||||||||||| ||||  |||||||||||
Sbjct: 172 aaggttgcgccccagatttcctcatcattagcaggcacagc 212



to top

>dbj|AP006689.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT27F14, TM0387,
             complete sequence
          Length = 96031

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 159   tgaaggttgcaccacagatttcctcctcat 188
             ||||||||||||| ||||||||||| ||||
Sbjct: 41219 tgaaggttgcaccccagatttcctcttcat 41248



to top

>emb|Z99976.1|MAZ99976 Musa acuminata mRNA for putative WALI7-related protein (clone pBAN
           ED141)
          Length = 750

 Score = 42.1 bits (21), Expect = 0.76
 Identities = 65/80 (81%)
 Strand = Plus / Plus

                                                                       
Query: 149 ccttccaccatgaaggttgcaccacagatttcctcctcatntgcaggcacagcggtcacc 208
           ||||||||| |||| || |||||||| | ||| ||||| | | || | || ||||| |||
Sbjct: 343 ccttccaccttgaaagtggcaccacatacttcttcctcgttttcaagaacggcggtgacc 402

                               
Query: 209 ttgttcttgggattctcgta 228
           |||| ||| |||||||||||
Sbjct: 403 ttgtgcttaggattctcgta 422



to top

>dbj|AB012110.1| Vigna radiata mRNA for ARG10, complete cds
          Length = 959

 Score = 42.1 bits (21), Expect = 0.76
 Identities = 65/80 (81%)
 Strand = Plus / Minus

                                                                       
Query: 146 gatccttccaccatgaaggttgcaccacagatttcctcctcatntgcaggcacagcggtc 205
           ||||| |||||| | || |||||||| ||||||||||| || |  ||||| || || || 
Sbjct: 726 gatccctccaccttaaaagttgcaccccagatttcctcttcttcggcaggtactgcagta 667

                               
Query: 206 accttgttcttgggattctc 225
           | ||||||||| ||||||||
Sbjct: 666 atcttgttctttggattctc 647



to top

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 55/67 (82%)
 Strand = Plus / Plus

                                                                           
Query: 159     tgaaggttgcaccacagatttcctcctcatntgcaggcacagcggtcaccttgttcttgg 218
               ||||||||||||| || ||||| || || |  ||||| || ||||||||||||| ||| |
Sbjct: 2215526 tgaaggttgcaccgcaaatttcttcttctttggcaggaactgcggtcaccttgtgctttg 2215585

                      
Query: 219     gattctc 225
               | |||||
Sbjct: 2215586 ggttctc 2215592



to top

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 55/67 (82%)
 Strand = Plus / Plus

                                                                           
Query: 159     tgaaggttgcaccacagatttcctcctcatntgcaggcacagcggtcaccttgttcttgg 218
               ||||||||||||| || ||||| || || |  ||||| || ||||||||||||| ||| |
Sbjct: 2215470 tgaaggttgcaccgcaaatttcttcttctttggcaggaactgcggtcaccttgtgctttg 2215529

                      
Query: 219     gattctc 225
               | |||||
Sbjct: 2215530 ggttctc 2215536



to top

>emb|AL928756.4|CNS08CBT Oryza sativa chromosome 12, . BAC OSJNBb0077O07 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 132703

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 55/67 (82%)
 Strand = Plus / Plus

                                                                         
Query: 159   tgaaggttgcaccacagatttcctcctcatntgcaggcacagcggtcaccttgttcttgg 218
             ||||||||||||| || ||||| || || |  ||||| || ||||||||||||| ||| |
Sbjct: 97750 tgaaggttgcaccgcaaatttcttcttctttggcaggaactgcggtcaccttgtgctttg 97809

                    
Query: 219   gattctc 225
             | |||||
Sbjct: 97810 ggttctc 97816



to top

>dbj|AP004960.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT19B18, TM0139,
             complete sequence
          Length = 106089

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 159   tgaaggttgcaccacagatttcctcctc 186
             ||||||||||||| || |||||||||||
Sbjct: 71058 tgaaggttgcaccccaaatttcctcctc 71031


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,404,734
Number of Sequences: 3902068
Number of extensions: 1404734
Number of successful extensions: 18998
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 18948
Number of HSP's gapped (non-prelim): 50
length of query: 235
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 213
effective length of database: 17,147,199,772
effective search space: 3652353551436
effective search space used: 3652353551436
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top