ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags13f21 |
|---|---|
| Clone Library Name | barley_pub |
>SAHH_METKA (P58855) Adenosylhomocysteinase (EC 3.3.1.1)| (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase) Length = 424 Score = 31.2 bits (69), Expect = 1.9 Identities = 15/37 (40%), Positives = 19/37 (51%) Frame = +2 Query: 218 DTNLRYYTNADAILRHYTDAILWHYTDAILRHYTEHP 328 +T YY N D +L H D I+ D I R +TE P Sbjct: 107 ETEEEYYQNIDRVLSHEPDIIVDDGADCIARVHTEFP 143
>PFTA_RAT (Q04631) Protein farnesyltransferase/geranylgeranyltransferase type| I alpha subunit (EC 2.5.1.58) (EC 2.5.1.59) (CAAX farnesyltransferase alpha subunit) (Ras proteins prenyltransferase alpha) (FTase-alpha) (Type I protein geranyl-geranyltransfer Length = 377 Score = 31.2 bits (69), Expect = 1.9 Identities = 21/89 (23%), Positives = 38/89 (42%) Frame = +2 Query: 188 WVRRRLQPDTDTNLRYYTNADAILRHYTDAILWHYTDAILRHYTEHPKYTFP*SPCKSKE 367 + R LQ D + + DAI + + +WH+ +LR S K + Sbjct: 102 YFRAVLQRDERSERAFKLTRDAIELNAANYTVWHFRRVLLR------------SLQKDLQ 149 Query: 368 AWIHWILRLLEESPRRYNCSYWVPWQHRQ 454 +++I+ ++EE P+ Y W HR+ Sbjct: 150 EEMNYIIAIIEEQPKNYQV-----WHHRR 173
>GLND_AZOVI (P36223) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII| uridylyl-transferase) (Uridylyl-removing enzyme) (UTase) Length = 899 Score = 30.0 bits (66), Expect = 4.3 Identities = 17/41 (41%), Positives = 21/41 (51%) Frame = +2 Query: 191 VRRRLQPDTDTNLRYYTNADAILRHYTDAILWHYTDAILRH 313 VR PD +L D LRH + I WH T+AIL+H Sbjct: 644 VRSGTDPDDAEHLWTQLGDDYFLRHTSSDIAWH-TEAILQH 683
>PO121_RAT (P52591) Nuclear envelope pore membrane protein POM 121 (Pore| membrane protein of 121 kDa) (P145) Length = 1199 Score = 30.0 bits (66), Expect = 4.3 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = -2 Query: 138 SSAHATLPGSCRSSVKQAPPRQHSSEEPCHPSCS 37 +S+ + P S RS + P ++ EEPCH S S Sbjct: 407 TSSPFSSPASSRSQTPERPAKKTREEEPCHQSSS 440
>PFTA_MOUSE (Q61239) Protein farnesyltransferase/geranylgeranyltransferase type| I alpha subunit (EC 2.5.1.58) (EC 2.5.1.59) (CAAX farnesyltransferase alpha subunit) (Ras proteins prenyltransferase alpha) (FTase-alpha) (Type I protein geranyl-geranyltransf Length = 377 Score = 30.0 bits (66), Expect = 4.3 Identities = 21/89 (23%), Positives = 37/89 (41%) Frame = +2 Query: 188 WVRRRLQPDTDTNLRYYTNADAILRHYTDAILWHYTDAILRHYTEHPKYTFP*SPCKSKE 367 + R LQ D + + DAI + + +WH+ +LR S K + Sbjct: 102 YFRAVLQRDERSERAFKLTRDAIELNAANYTVWHFRRVLLR------------SLQKDLQ 149 Query: 368 AWIHWILRLLEESPRRYNCSYWVPWQHRQ 454 +++I ++EE P+ Y W HR+ Sbjct: 150 EEMNYITAIIEEQPKNYQV-----WHHRR 173
>GP179_HUMAN (Q6PRD1) Probable G-protein coupled receptor 179 precursor| (Probable G-protein coupled receptor 158-like 1) Length = 2367 Score = 29.6 bits (65), Expect = 5.6 Identities = 16/50 (32%), Positives = 24/50 (48%) Frame = -2 Query: 150 KKSRSSAHATLPGSCRSSVKQAPPRQHSSEEPCHPSCSQYVQSRQQNKQL 1 + S S H +LPGS R + + ++ H S S Y Q R+Q+ L Sbjct: 736 RDSGSPGHGSLPGSSRRRLLSSSLQEPEGTPALHKSRSTYDQRREQDPPL 785
>ACDB1_METJA (Q57616) Acetyl-CoA decarbonylase/synthase complex beta subunit 1| (EC 2.3.1.-) (ACDS complex beta subunit 1) (ACDS complex acyltransferase 1) Length = 748 Score = 29.6 bits (65), Expect = 5.6 Identities = 13/32 (40%), Positives = 17/32 (53%) Frame = +3 Query: 390 DFWKNHPDAIIAAIGSLGNIGKTFGAACSMIG 485 D+ KN A++ A+G L NI GA C G Sbjct: 224 DYLKNRVPAVVVALGELDNITLAAGAGCIKAG 255
>MMTA2_RAT (Q5M9I6) Multiple myeloma tumor-associated protein 2 homolog| Length = 260 Score = 28.9 bits (63), Expect = 9.6 Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 2/49 (4%) Frame = -2 Query: 150 KKSRSSAHATLPGSCRSSVKQAPPR--QHSSEEPCHPSCSQYVQSRQQN 10 KK + H SC SS A PR +HS PC+ ++ Q +N Sbjct: 200 KKKKDKEHKREADSCSSSPSPARPRRQRHSDFSPCYKRKREHSQDSGRN 248
>EFNA1_RAT (P97553) Ephrin-A1 precursor (EPH-related receptor tyrosine kinase| ligand 1) (LERK-1) (Immediate early response protein B61) Length = 205 Score = 28.9 bits (63), Expect = 9.6 Identities = 28/89 (31%), Positives = 36/89 (40%), Gaps = 13/89 (14%) Frame = +2 Query: 146 FFYAPLWGLTNSLAWVRRRLQPDTDTNLRY----YTNADAILRHYTDAILWHY-----TD 298 F +APL GL SLA R + +N ++ YT L Y D I HY D Sbjct: 3 FLWAPLLGLCCSLAAADRHIVFWNSSNPKFREEDYT-VHVQLNDYLDIICPHYEDDSVAD 61 Query: 299 AILRHYT----EHPKYTFP*SPCKSKEAW 373 A + YT EH +Y K + W Sbjct: 62 AAMERYTLYMVEHQEYVTCEPQSKDQVRW 90
>EFNA1_MOUSE (P52793) Ephrin-A1 precursor (EPH-related receptor tyrosine kinase| ligand 1) (LERK-1) (Immediate early response protein B61) Length = 205 Score = 28.9 bits (63), Expect = 9.6 Identities = 28/89 (31%), Positives = 36/89 (40%), Gaps = 13/89 (14%) Frame = +2 Query: 146 FFYAPLWGLTNSLAWVRRRLQPDTDTNLRY----YTNADAILRHYTDAILWHY-----TD 298 F +APL GL SLA R + +N ++ YT L Y D I HY D Sbjct: 3 FLWAPLLGLCCSLAAADRHIVFWNSSNPKFREEDYT-VHVQLNDYLDIICPHYEDDSVAD 61 Query: 299 AILRHYT----EHPKYTFP*SPCKSKEAW 373 A + YT EH +Y K + W Sbjct: 62 AAMERYTLYMVEHQEYVACQPQSKDQVRW 90
>MN1_HUMAN (Q10571) Probable tumor suppressor protein MN1| Length = 1319 Score = 28.9 bits (63), Expect = 9.6 Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 5/61 (8%) Frame = -2 Query: 171 SPHSGA*KKSRS-SAHATLPGSCRSSVKQA----PPRQHSSEEPCHPSCSQYVQSRQQNK 7 S H+GA S SA+ LPG V + PP QH + P H S Q Q +QQ + Sbjct: 475 SMHNGALDNHLSPSAYPGLPGEFTPPVPDSFPSGPPLQHPA--PDHQSLQQQQQQQQQQQ 532 Query: 6 Q 4 Q Sbjct: 533 Q 533 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 66,472,688 Number of Sequences: 219361 Number of extensions: 1231388 Number of successful extensions: 3918 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 3791 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3914 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4258037034 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
