ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags13f13 |
|---|---|
| Clone Library Name | barley_pub |
>RS6_ASPOF (Q9M3V8) 40S ribosomal protein S6| Length = 251 Score = 233 bits (593), Expect = 4e-61 Identities = 119/153 (77%), Positives = 129/153 (84%) Frame = +2 Query: 2 GRRVGERRXKSVRGCIVSQDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLF 181 GRR GERR KSVRGCIVS DLSV+NLVIVKKG+NDLPGLTD EKPRMRGPKRASKI+KLF Sbjct: 88 GRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGENDLPGLTDVEKPRMRGPKRASKIRKLF 147 Query: 182 NLGKDDDVRQYVNTYRRSFTNKKGKTVSKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXX 361 NL K+DDVR+YVNTYRR+FTNKKGKT SKAPKIQRLVTPLT+Q Sbjct: 148 NLSKEDDVRKYVNTYRRTFTNKKGKTCSKAPKIQRLVTPLTLQRKRARIAEKKKRVAKAK 207 Query: 362 SEAAEYQKLLAQRLKEQRDRRSESMAKRRSKLS 460 SEAAEYQKLLA RLKEQRDRRSES+AK+RS+LS Sbjct: 208 SEAAEYQKLLASRLKEQRDRRSESLAKKRSRLS 240
>RS6B_ARATH (P51430) 40S ribosomal protein S6-2| Length = 249 Score = 232 bits (592), Expect = 5e-61 Identities = 118/153 (77%), Positives = 130/153 (84%) Frame = +2 Query: 2 GRRVGERRXKSVRGCIVSQDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLF 181 GRR GERR KSVRGCIVS DLSV+NLVIVKKG +DLPGLTDTEKPRMRGPKRASKI+KLF Sbjct: 88 GRRTGERRRKSVRGCIVSPDLSVLNLVIVKKGVSDLPGLTDTEKPRMRGPKRASKIRKLF 147 Query: 182 NLGKDDDVRQYVNTYRRSFTNKKGKTVSKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXX 361 NLGK+DDVR+YVNTYRR+FTNKKGK VSKAPKIQRLVTPLT+Q Sbjct: 148 NLGKEDDVRKYVNTYRRTFTNKKGKKVSKAPKIQRLVTPLTLQRKRARIADKKKRIAKAN 207 Query: 362 SEAAEYQKLLAQRLKEQRDRRSESMAKRRSKLS 460 S+AA+YQKLLA RLKEQRDRRSES+AK+RS+LS Sbjct: 208 SDAADYQKLLASRLKEQRDRRSESLAKKRSRLS 240
>RS6A_ARATH (O48549) 40S ribosomal protein S6-1| Length = 250 Score = 231 bits (589), Expect = 1e-60 Identities = 118/153 (77%), Positives = 128/153 (83%) Frame = +2 Query: 2 GRRVGERRXKSVRGCIVSQDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLF 181 GRR GERR KSVRGCIVS DLSV+NLVIVKKG+NDLPGLTDTEKPRMRGPKRASKI+KLF Sbjct: 88 GRRTGERRRKSVRGCIVSPDLSVLNLVIVKKGENDLPGLTDTEKPRMRGPKRASKIRKLF 147 Query: 182 NLGKDDDVRQYVNTYRRSFTNKKGKTVSKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXX 361 NL K+DDVR YVNTYRR FTNKKGK VSKAPKIQRLVTPLT+Q Sbjct: 148 NLKKEDDVRTYVNTYRRKFTNKKGKEVSKAPKIQRLVTPLTLQRKRARIADKKKKIAKAN 207 Query: 362 SEAAEYQKLLAQRLKEQRDRRSESMAKRRSKLS 460 S+AA+YQKLLA RLKEQRDRRSES+AK+RS+LS Sbjct: 208 SDAADYQKLLASRLKEQRDRRSESLAKKRSRLS 240
>RS6_TOBAC (P29345) 40S ribosomal protein S6 (Fragment)| Length = 199 Score = 182 bits (461), Expect = 8e-46 Identities = 100/153 (65%), Positives = 114/153 (74%) Frame = +2 Query: 2 GRRVGERRXKSVRGCIVSQDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLF 181 GRR GERR KSVRGCIVS DLSV+NLVIVKKG+NDLPGLTDTEKPRMRGP+ + + L+ Sbjct: 43 GRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGENDLPGLTDTEKPRMRGPREPQRSEALY 102 Query: 182 NLGKDDDVRQYVNTYRRSFTNKKGKTVSKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXX 361 K+DDVR+YVNT T KG SKAPKIQRLVTPLT+Q Sbjct: 103 --FKEDDVRKYVNTTAEFTTKWKG---SKAPKIQRLVTPLTLQRKRARIADKKKRIAKAK 157 Query: 362 SEAAEYQKLLAQRLKEQRDRRSESMAKRRSKLS 460 SEAAEYQKLLA RLKEQR++RSES+AK+RS+LS Sbjct: 158 SEAAEYQKLLASRLKEQREKRSESLAKKRSRLS 190
>RS6_ICTPU (Q90YR8) 40S ribosomal protein S6| Length = 249 Score = 161 bits (408), Expect = 1e-39 Identities = 85/148 (57%), Positives = 104/148 (70%) Frame = +2 Query: 5 RRVGERRXKSVRGCIVSQDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFN 184 RR GER+ KSVRGCIV +LSV+NLVI++KG+ D+PGLTD+ PR GPKRAS+I+KLFN Sbjct: 87 RRTGERKRKSVRGCIVDANLSVLNLVIIRKGEKDIPGLTDSTVPRRLGPKRASRIRKLFN 146 Query: 185 LGKDDDVRQYVNTYRRSFTNKKGKTVSKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXXS 364 L K+DDVRQYV RR T + K +KAPKIQRLVTP +Q Sbjct: 147 LSKEDDVRQYV--VRRPLTKEGKKPRTKAPKIQRLVTPRVLQHKRRRIALKRQRTQKNKD 204 Query: 365 EAAEYQKLLAQRLKEQRDRRSESMAKRR 448 EAAEY KLLA+RLKE +++R E +AKRR Sbjct: 205 EAAEYAKLLAKRLKEAKEKRQEKIAKRR 232
>RS6_RAT (P62755) 40S ribosomal protein S6| Length = 249 Score = 161 bits (407), Expect = 2e-39 Identities = 88/149 (59%), Positives = 105/149 (70%), Gaps = 1/149 (0%) Frame = +2 Query: 5 RRVGERRXKSVRGCIVSQDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFN 184 RR GER+ KSVRGCIV +LSV+NLVIVKKG+ D+PGLTDT PR GPKRAS+I+KLFN Sbjct: 87 RRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKDIPGLTDTTVPRRLGPKRASRIRKLFN 146 Query: 185 LGKDDDVRQYVNTYRRSFTNKKGKTV-SKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXX 361 L K+DDVRQYV R NK+GK +KAPKIQRLVTP +Q Sbjct: 147 LSKEDDVRQYV---VRKPLNKEGKKPRTKAPKIQRLVTPRVLQHKRRRIALKKQRTKKNK 203 Query: 362 SEAAEYQKLLAQRLKEQRDRRSESMAKRR 448 EAAEY KLLA+R+KE +++R E +AKRR Sbjct: 204 EEAAEYAKLLAKRMKEAKEKRQEQIAKRR 232
>RS6_MOUSE (P62754) 40S ribosomal protein S6 (Phosphoprotein NP33)| Length = 249 Score = 161 bits (407), Expect = 2e-39 Identities = 88/149 (59%), Positives = 105/149 (70%), Gaps = 1/149 (0%) Frame = +2 Query: 5 RRVGERRXKSVRGCIVSQDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFN 184 RR GER+ KSVRGCIV +LSV+NLVIVKKG+ D+PGLTDT PR GPKRAS+I+KLFN Sbjct: 87 RRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKDIPGLTDTTVPRRLGPKRASRIRKLFN 146 Query: 185 LGKDDDVRQYVNTYRRSFTNKKGKTV-SKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXX 361 L K+DDVRQYV R NK+GK +KAPKIQRLVTP +Q Sbjct: 147 LSKEDDVRQYV---VRKPLNKEGKKPRTKAPKIQRLVTPRVLQHKRRRIALKKQRTKKNK 203 Query: 362 SEAAEYQKLLAQRLKEQRDRRSESMAKRR 448 EAAEY KLLA+R+KE +++R E +AKRR Sbjct: 204 EEAAEYAKLLAKRMKEAKEKRQEQIAKRR 232
>RS6_HUMAN (P62753) 40S ribosomal protein S6 (Phosphoprotein NP33)| Length = 249 Score = 161 bits (407), Expect = 2e-39 Identities = 88/149 (59%), Positives = 105/149 (70%), Gaps = 1/149 (0%) Frame = +2 Query: 5 RRVGERRXKSVRGCIVSQDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFN 184 RR GER+ KSVRGCIV +LSV+NLVIVKKG+ D+PGLTDT PR GPKRAS+I+KLFN Sbjct: 87 RRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKDIPGLTDTTVPRRLGPKRASRIRKLFN 146 Query: 185 LGKDDDVRQYVNTYRRSFTNKKGKTV-SKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXX 361 L K+DDVRQYV R NK+GK +KAPKIQRLVTP +Q Sbjct: 147 LSKEDDVRQYV---VRKPLNKEGKKPRTKAPKIQRLVTPRVLQHKRRRIALKKQRTKKNK 203 Query: 362 SEAAEYQKLLAQRLKEQRDRRSESMAKRR 448 EAAEY KLLA+R+KE +++R E +AKRR Sbjct: 204 EEAAEYAKLLAKRMKEAKEKRQEQIAKRR 232
>RS6_CHICK (P47838) 40S ribosomal protein S6| Length = 249 Score = 160 bits (404), Expect = 3e-39 Identities = 87/149 (58%), Positives = 105/149 (70%), Gaps = 1/149 (0%) Frame = +2 Query: 5 RRVGERRXKSVRGCIVSQDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFN 184 RR GER+ KSVRGCIV +LSV+NLVIVKKG+ D+PGLTDT PR GPKRAS+I+KLFN Sbjct: 87 RRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKDIPGLTDTTVPRRLGPKRASRIRKLFN 146 Query: 185 LGKDDDVRQYVNTYRRSFTNKKGKTV-SKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXX 361 L K+DDVRQYV R NK+GK +KAPKIQRLVTP +Q Sbjct: 147 LSKEDDVRQYV---VRKPLNKEGKKPRTKAPKIQRLVTPRVLQHKRRRIALKKQRTQKNK 203 Query: 362 SEAAEYQKLLAQRLKEQRDRRSESMAKRR 448 EAA+Y KLLA+R+KE +++R E +AKRR Sbjct: 204 EEAADYAKLLAKRMKEAKEKRQEQIAKRR 232
>RS6_ONCMY (Q9YGF2) 40S ribosomal protein S6| Length = 249 Score = 158 bits (399), Expect = 1e-38 Identities = 83/148 (56%), Positives = 103/148 (69%) Frame = +2 Query: 5 RRVGERRXKSVRGCIVSQDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFN 184 RR GER+ KSVRGCI +LSV+NLVI+KKG+ D+PGLTD+ PR GPKRASKI+KLFN Sbjct: 87 RRTGERKRKSVRGCIGDANLSVLNLVIIKKGEKDIPGLTDSTVPRRLGPKRASKIRKLFN 146 Query: 185 LGKDDDVRQYVNTYRRSFTNKKGKTVSKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXXS 364 L K+DDVRQYV RR T + K +KAP+IQRLVTP +Q Sbjct: 147 LAKEDDVRQYV--VRRPLTKEGKKPRTKAPRIQRLVTPRVLQHKRRRIALKKQRTQKNKE 204 Query: 365 EAAEYQKLLAQRLKEQRDRRSESMAKRR 448 EA+EY KLLA+R+KE +++R E +AKRR Sbjct: 205 EASEYAKLLAKRMKEAKEKRQEQIAKRR 232
>RS6_XENLA (P39017) 40S ribosomal protein S6| Length = 249 Score = 155 bits (391), Expect = 1e-37 Identities = 82/148 (55%), Positives = 101/148 (68%) Frame = +2 Query: 5 RRVGERRXKSVRGCIVSQDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFN 184 RR GER+ KSVRGCIV +LSV+NLVIV+KG+ D+PGLTD PR GPKRAS+I+KLFN Sbjct: 87 RRTGERKRKSVRGCIVDANLSVLNLVIVRKGEKDIPGLTDNTVPRRLGPKRASRIRKLFN 146 Query: 185 LGKDDDVRQYVNTYRRSFTNKKGKTVSKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXXS 364 L K+DDVRQYV R+ + K +KAPKIQRLVTP +Q Sbjct: 147 LSKEDDVRQYV--VRKPLAKEGKKPRTKAPKIQRLVTPRVLQHKRRRIALKKQRTQKNKE 204 Query: 365 EAAEYQKLLAQRLKEQRDRRSESMAKRR 448 EA+EY KLLA+R KE +++R E +AKRR Sbjct: 205 EASEYAKLLAKRSKEAKEKRQEQIAKRR 232
>RS6_APLCA (Q9BMX5) 40S ribosomal protein S6| Length = 247 Score = 151 bits (382), Expect = 1e-36 Identities = 84/152 (55%), Positives = 102/152 (67%), Gaps = 2/152 (1%) Frame = +2 Query: 5 RRVGERRXKSVRGCIVSQDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFN 184 RR GER+ KSVRGCIV +LSV++LVI+KKG+ D+PGLTD PR GPKRASKI+KLFN Sbjct: 87 RRTGERKRKSVRGCIVDSNLSVLSLVIIKKGEQDIPGLTDKTIPRRLGPKRASKIRKLFN 146 Query: 185 LGKDDDVRQYVNTYRRSFTNKKGKTV-SKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXX 361 L K+DDVRQYV RR + GK SKAPKIQRLVTP+ +Q Sbjct: 147 LSKEDDVRQYV--VRRPLPERDGKKAKSKAPKIQRLVTPVVLQRKRARMALKKKRVTKKR 204 Query: 362 SEAAEYQKLLAQRLKEQRDRRSE-SMAKRRSK 454 + AEY KLLAQR+KE ++R+ E + RSK Sbjct: 205 EDHAEYTKLLAQRMKEAKERKMERKRSNSRSK 236
>RS6_BRAFL (O01727) 40S ribosomal protein S6| Length = 244 Score = 145 bits (367), Expect = 7e-35 Identities = 83/150 (55%), Positives = 98/150 (65%), Gaps = 1/150 (0%) Frame = +2 Query: 5 RRVGERRXKSVRGCIVSQDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFN 184 RR GER+ KSVRGCIV +LSV+NLVI+KKG+ D+PGLTDT PR GPKRA +I+KLFN Sbjct: 87 RRTGERKRKSVRGCIVDSNLSVLNLVILKKGEQDIPGLTDTTIPRRLGPKRAGRIRKLFN 146 Query: 185 LGKDDDVRQYVNTYRRSFTNKKGKTVS-KAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXX 361 L K+DDVRQYV RR K+GK K PKIQRL+TP +Q Sbjct: 147 LNKEDDVRQYV--VRRPLPQKEGKKQKFKTPKIQRLITPQRLQRKRHMRAVKRRRYAKQR 204 Query: 362 SEAAEYQKLLAQRLKEQRDRRSESMAKRRS 451 E A Y KLLA+R KE+R E+ AKRRS Sbjct: 205 EEEATYAKLLAKRKKEER----EAHAKRRS 230
>RS6_YARLI (Q6C169) 40S ribosomal protein S6| Length = 242 Score = 143 bits (361), Expect = 3e-34 Identities = 77/151 (50%), Positives = 97/151 (64%) Frame = +2 Query: 5 RRVGERRXKSVRGCIVSQDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFN 184 RR GER+ KSVRGCIVS DLSV+++VIVK+G D+ GLT PR GPKRA+ I+KLF Sbjct: 87 RRAGERKRKSVRGCIVSSDLSVLSVVIVKQGDADIEGLTTETVPRRLGPKRANNIRKLFA 146 Query: 185 LGKDDDVRQYVNTYRRSFTNKKGKTVSKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXXS 364 L K+DDVRQYV RR T K GKT +KAPKIQRL+TP + Sbjct: 147 LSKEDDVRQYV--IRREVTTKSGKTYTKAPKIQRLITPRRLAHKAQLREKKVKAIQASKD 204 Query: 365 EAAEYQKLLAQRLKEQRDRRSESMAKRRSKL 457 AAEY +LLA+R+ E++ ++E +R S L Sbjct: 205 AAAEYAQLLAKRVAEKKSEKAEEKKRRASSL 235
>RS6_MANSE (Q94624) 40S ribosomal protein S6| Length = 253 Score = 142 bits (359), Expect = 6e-34 Identities = 81/153 (52%), Positives = 100/153 (65%), Gaps = 4/153 (2%) Frame = +2 Query: 5 RRVGERRXKSVRGCIVSQDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFN 184 RR GER+ KSVRGCIV +LSV+ LVIV+KG+ ++PGLTD PR GPKRASKI+KLFN Sbjct: 87 RRDGERKRKSVRGCIVDANLSVLALVIVRKGEQEIPGLTDGNVPRRLGPKRASKIRKLFN 146 Query: 185 LGKDDDVRQYVNTYRRSFTNKKGKTVS----KAPKIQRLVTPLTIQXXXXXXXXXXXXXX 352 L K+DDVR+YV + K+GK + KAPKIQRLVTP+ +Q Sbjct: 147 LSKEDDVRRYV--VKALLPAKEGKENAKPRYKAPKIQRLVTPVVLQRRRHRLALKKKRLA 204 Query: 353 XXXSEAAEYQKLLAQRLKEQRDRRSESMAKRRS 451 S A+Y KLLAQR KE + RR E + +RRS Sbjct: 205 KRKSAEADYAKLLAQRKKESKVRRQEEIKRRRS 237
>RS6_SPOFR (Q95V32) 40S ribosomal protein S6| Length = 253 Score = 142 bits (357), Expect = 1e-33 Identities = 80/153 (52%), Positives = 99/153 (64%), Gaps = 4/153 (2%) Frame = +2 Query: 5 RRVGERRXKSVRGCIVSQDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFN 184 RR GER+ KSVRGCIV +LSV+ LVIV+KG+ ++PGLTD PR GPKRASKI+KLFN Sbjct: 87 RRDGERKRKSVRGCIVDANLSVLALVIVRKGEQEIPGLTDGNVPRRLGPKRASKIRKLFN 146 Query: 185 LGKDDDVRQYVNTYRRSFTNKKGKTVS----KAPKIQRLVTPLTIQXXXXXXXXXXXXXX 352 L K+DDVR+YV +R K+GK + KAPKIQRLVTP+ +Q Sbjct: 147 LSKEDDVRRYV--VKRLLPAKEGKENAKPRYKAPKIQRLVTPVVLQRRRHRLALKKKRLA 204 Query: 353 XXXSEAAEYQKLLAQRLKEQRDRRSESMAKRRS 451 +Y KLLAQR KE + RR E + +RRS Sbjct: 205 KRKQSENDYAKLLAQRKKESKVRRQEELKRRRS 237
>RS6_DROME (P29327) 40S ribosomal protein S6| Length = 248 Score = 142 bits (357), Expect = 1e-33 Identities = 75/152 (49%), Positives = 99/152 (65%), Gaps = 1/152 (0%) Frame = +2 Query: 5 RRVGERRXKSVRGCIVSQDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFN 184 RR GER+ KSVRGCIV ++SV+ LV++KKG+ D+PGLTDT PR GPKRASKI+KL+N Sbjct: 87 RRTGERKRKSVRGCIVDANMSVLALVVLKKGEKDIPGLTDTTIPRRLGPKRASKIRKLYN 146 Query: 185 LGKDDDVRQYVNTYRRSFTNKKG-KTVSKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXX 361 L K+DDVR++V RR K K SKAPKIQRL+TP+ +Q Sbjct: 147 LSKEDDVRRFV--VRRPLPAKDNKKATSKAPKIQRLITPVVLQRKHRRIALKKKRQIASK 204 Query: 362 SEAAEYQKLLAQRLKEQRDRRSESMAKRRSKL 457 +A+Y KLL QR KE + +R E+ +R + + Sbjct: 205 EASADYAKLLVQRKKESKAKREEAKRRRSASI 236
>RS6A_SCHPO (P05752) 40S ribosomal protein S6-A| Length = 239 Score = 140 bits (353), Expect = 3e-33 Identities = 77/153 (50%), Positives = 99/153 (64%), Gaps = 2/153 (1%) Frame = +2 Query: 5 RRVGERRXKSVRGCIVSQDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFN 184 RR GER+ KSVRGCIV QDL+V+ L I+K+G+ D+PGLTD P+ GPKRASKI++ FN Sbjct: 87 RRDGERKRKSVRGCIVGQDLAVLALAIIKQGEQDIPGLTDVTVPKRLGPKRASKIRRFFN 146 Query: 185 LGKDDDVRQYVNTYRRSFTNKK--GKTVSKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXX 358 L K+DDVRQ+V RR KK K +KAPKIQRLVTP T+Q Sbjct: 147 LSKEDDVRQFV--IRREVVPKKEGKKPYTKAPKIQRLVTPRTLQHKRHRFALKRRQAEKN 204 Query: 359 XSEAAEYQKLLAQRLKEQRDRRSESMAKRRSKL 457 EAAE+ +L+A+R+ E + +R A+R S L Sbjct: 205 REEAAEFAQLMAKRVAEAKQKREVVKARRASSL 237
>RS6B_SCHPO (Q9C0Z7) 40S ribosomal protein S6-B| Length = 239 Score = 139 bits (349), Expect = 8e-33 Identities = 76/153 (49%), Positives = 99/153 (64%), Gaps = 2/153 (1%) Frame = +2 Query: 5 RRVGERRXKSVRGCIVSQDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFN 184 RR GER+ KSVRGCIV QDL+V+ L IVK+G+ D+PGLTD P+ GPKRASKI++ FN Sbjct: 87 RRDGERKRKSVRGCIVGQDLAVLALAIVKQGEQDIPGLTDVTVPKRLGPKRASKIRRFFN 146 Query: 185 LGKDDDVRQYVNTYRRSFTNKK--GKTVSKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXX 358 L K+DDVRQ+V RR KK K +KAPKIQRLVTP T+Q Sbjct: 147 LSKEDDVRQFV--IRREVVPKKEGKKPYTKAPKIQRLVTPRTLQHKRHRFALKRRQAEKN 204 Query: 359 XSEAAEYQKLLAQRLKEQRDRRSESMAKRRSKL 457 EAAE+ +L+A+R+ E + ++ A+R S + Sbjct: 205 REEAAEFAQLMAKRVAEAKQKKEVVKARRASSM 237
>RS6_AEDAE (Q9U761) 40S ribosomal protein S6| Length = 346 Score = 138 bits (347), Expect = 1e-32 Identities = 74/153 (48%), Positives = 96/153 (62%), Gaps = 1/153 (0%) Frame = +2 Query: 5 RRVGERRXKSVRGCIVSQDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFN 184 RR GER+ KSVRGCIV Q+LS + L++VKKG+ D+PGLTDT PR GPKRAS I+KL+N Sbjct: 87 RRTGERKRKSVRGCIVDQNLSALALIVVKKGEKDIPGLTDTTVPRRLGPKRASNIRKLYN 146 Query: 185 LGKDDDVRQYVNTYRRSFTNKKGKTV-SKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXX 361 L K+DDVRQ+V +R K GK +KAPKIQRL+TP+ +Q Sbjct: 147 LTKEDDVRQFV--VKRPLPEKDGKKARTKAPKIQRLITPVVLQRKRHRLAIKKRRVESRK 204 Query: 362 SEAAEYQKLLAQRLKEQRDRRSESMAKRRSKLS 460 AEY K+L R +++R RR ++ R S Sbjct: 205 EAEAEYMKILHLRRRQERIRRRSRLSSMRDSRS 237
>RS6_DEBHA (Q6BXH8) 40S ribosomal protein S6| Length = 236 Score = 137 bits (345), Expect = 2e-32 Identities = 77/151 (50%), Positives = 97/151 (64%) Frame = +2 Query: 5 RRVGERRXKSVRGCIVSQDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFN 184 RR GER+ KSVRGCIV+QDL+V+ L +VK+G +D+ GLTDT P+ GPKRA+ I+K F Sbjct: 87 RRTGERKRKSVRGCIVAQDLAVLALSVVKQGDSDIEGLTDTTTPKRLGPKRANNIRKFFG 146 Query: 185 LGKDDDVRQYVNTYRRSFTNKKGKTVSKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXXS 364 L K+DDVRQ+V RR K K +KAPKIQRLVTP T+Q Sbjct: 147 LTKEDDVRQFV--VRREVV-KGDKKYTKAPKIQRLVTPQTLQRKRALKAQKVKNAQQQRD 203 Query: 365 EAAEYQKLLAQRLKEQRDRRSESMAKRRSKL 457 AAEY +LLAQRL E++ R+E +R S L Sbjct: 204 AAAEYAQLLAQRLHERKAERAEIKKRRASSL 234
>RS6_AEDAL (Q9U762) 40S ribosomal protein S6| Length = 349 Score = 135 bits (339), Expect = 1e-31 Identities = 74/153 (48%), Positives = 95/153 (62%), Gaps = 1/153 (0%) Frame = +2 Query: 5 RRVGERRXKSVRGCIVSQDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFN 184 RR GER+ KSVRGCIV Q+LS + L++VKKG+ D+PGLTDT R GPKRAS I+KL+N Sbjct: 87 RRTGERKRKSVRGCIVDQNLSALALIVVKKGEKDIPGLTDTTVLRRLGPKRASNIRKLYN 146 Query: 185 LGKDDDVRQYVNTYRRSFTNKKGKTV-SKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXX 361 L K+DDVRQYV +R K GK +KAPKIQRL+TP+ +Q Sbjct: 147 LTKEDDVRQYV--VKRPLPEKDGKKPRTKAPKIQRLITPVVLQRKRHRLAIKKRRVESRK 204 Query: 362 SEAAEYQKLLAQRLKEQRDRRSESMAKRRSKLS 460 AEY K+L R +++R RR ++ R S Sbjct: 205 EAEAEYMKILHLRRRQERIRRRSRLSSMRDSRS 237
>RS6_YEAST (P02365) 40S ribosomal protein S6 (S10) (YS4) (RP9)| Length = 236 Score = 131 bits (330), Expect = 1e-30 Identities = 76/151 (50%), Positives = 95/151 (62%) Frame = +2 Query: 5 RRVGERRXKSVRGCIVSQDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFN 184 RR GER+ KSVRG IV DL+V+ LVIVKKG+ +L GLTDT P+ GPKRA+ I+K F Sbjct: 87 RRDGERKRKSVRGAIVGPDLAVLALVIVKKGEQELEGLTDTTVPKRLGPKRANNIRKFFG 146 Query: 185 LGKDDDVRQYVNTYRRSFTNKKGKTVSKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXXS 364 L K+DDVR +V RR T K KT +KAPKIQRLVTP +Q Sbjct: 147 LSKEDDVRDFV--IRREVT-KGEKTYTKAPKIQRLVTPQRLQRKRHQRALKVRNAQAQRE 203 Query: 365 EAAEYQKLLAQRLKEQRDRRSESMAKRRSKL 457 AAEY +LLA+RL E++ ++E +R S L Sbjct: 204 AAAEYAQLLAKRLSERKAEKAEIRKRRASSL 234
>RS6_CAEEL (Q9NEN6) 40S ribosomal protein S6| Length = 246 Score = 129 bits (325), Expect = 5e-30 Identities = 74/152 (48%), Positives = 97/152 (63%) Frame = +2 Query: 5 RRVGERRXKSVRGCIVSQDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFN 184 R+ GER+ KSVRGCIV ++S ++LVIVKKG ++ GLTD+ PR GPKRASKI+KLFN Sbjct: 87 RKNGERKRKSVRGCIVDANMSALSLVIVKKGDGEIEGLTDSVLPRKLGPKRASKIRKLFN 146 Query: 185 LGKDDDVRQYVNTYRRSFTNKKGKTVSKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXXS 364 L K DDV +YV T+ ++F + KT+ APKIQRL+TP I Sbjct: 147 LTKHDDVTKYVITHDKTFPDGVTKTI--APKIQRLITPARIARKKYLLRQKRNQKIKMRD 204 Query: 365 EAAEYQKLLAQRLKEQRDRRSESMAKRRSKLS 460 +AA Y KLLA+ KE+ D + +A+RRS S Sbjct: 205 DAAAYHKLLAKYSKEEHDAK---IARRRSSAS 233
>RS6_CANGA (Q6FJH3) 40S ribosomal protein S6| Length = 236 Score = 129 bits (324), Expect = 6e-30 Identities = 74/151 (49%), Positives = 96/151 (63%) Frame = +2 Query: 5 RRVGERRXKSVRGCIVSQDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFN 184 RR GER+ KSVRG IV DL+V++LVIVKKG+ +L G+TD P+ GPKRA+ I+K F Sbjct: 87 RRSGERKRKSVRGAIVGPDLAVLSLVIVKKGEQELEGVTDATVPKRLGPKRANHIRKFFG 146 Query: 185 LGKDDDVRQYVNTYRRSFTNKKGKTVSKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXXS 364 L K+DDVR +V RR T K KT +KAPKIQRLVTP +Q Sbjct: 147 LTKEDDVRDFV--IRREVT-KGEKTYTKAPKIQRLVTPQRLQRKRYQRNLKVRNAQAQRE 203 Query: 365 EAAEYQKLLAQRLKEQRDRRSESMAKRRSKL 457 AAEY +LLA+RL E++ ++E+ +R S L Sbjct: 204 AAAEYAQLLAKRLAERKAEKAETRKRRASSL 234
>RS6_KLULA (Q6CM04) 40S ribosomal protein S6| Length = 236 Score = 123 bits (309), Expect = 4e-28 Identities = 70/151 (46%), Positives = 93/151 (61%) Frame = +2 Query: 5 RRVGERRXKSVRGCIVSQDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFN 184 RR GER+ KSVRG IV DL+V+ L+I KKG+ ++ G+T+ P+ GPKRA+ I+K F Sbjct: 87 RRNGERKRKSVRGAIVGPDLAVLALIITKKGEQEIEGITNDTVPKRLGPKRANNIRKFFG 146 Query: 185 LGKDDDVRQYVNTYRRSFTNKKGKTVSKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXXS 364 L K+DDVR YV RR T K K+ +KAPKIQRLVTP +Q Sbjct: 147 LTKEDDVRDYV--IRREVT-KGDKSYTKAPKIQRLVTPQRLQRKRQQKSLKIKNAQAQRE 203 Query: 365 EAAEYQKLLAQRLKEQRDRRSESMAKRRSKL 457 AAEY +LLA+RL E++ ++E +R S L Sbjct: 204 AAAEYAQLLAKRLSERKAEKAEVRKRRASSL 234
>RS6_ASHGO (Q74ZK3) 40S ribosomal protein S6| Length = 236 Score = 123 bits (308), Expect = 5e-28 Identities = 70/151 (46%), Positives = 91/151 (60%) Frame = +2 Query: 5 RRVGERRXKSVRGCIVSQDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFN 184 RR GER+ KSVRG IV DL+V+ L+I KKG ++ G+T+ P+ GPKRA+ I+K F Sbjct: 87 RRNGERKRKSVRGAIVGPDLAVLALIITKKGDQEIEGITNESVPKRLGPKRANNIRKFFG 146 Query: 185 LGKDDDVRQYVNTYRRSFTNKKGKTVSKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXXS 364 L KDDDVR +V RR K KT +KAPKIQRLVTP +Q Sbjct: 147 LTKDDDVRDFV--IRREVV-KGDKTYTKAPKIQRLVTPQRLQRKRHQRALKVRNAQAQRE 203 Query: 365 EAAEYQKLLAQRLKEQRDRRSESMAKRRSKL 457 AAEY +LLA+RL E++ ++E +R S L Sbjct: 204 AAAEYAQLLAKRLTEKKAEKAEERKRRASSL 234
>RS6_KLUMA (P41798) 40S ribosomal protein S6 (Ribosomal protein S10)| Length = 235 Score = 121 bits (303), Expect = 2e-27 Identities = 74/151 (49%), Positives = 92/151 (60%) Frame = +2 Query: 5 RRVGERRXKSVRGCIVSQDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFN 184 RR GER+ KSVRG IV DL+V+ LVIVKKG ++ G+T+ P+ GPKRA+ I+K F Sbjct: 87 RRNGERKRKSVRGAIVGPDLAVLALVIVKKGDQEIEGVTNETVPKRLGPKRANNIRKFFG 146 Query: 185 LGKDDDVRQYVNTYRRSFTNKKGKTVSKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXXS 364 L K+DDVR YV RR T K KT +KAPKIQRLVTP +Q Sbjct: 147 LTKEDDVRDYV--IRREVT-KGEKTYTKAPKIQRLVTPQRLQRKRQQKALKIKNAQAQRE 203 Query: 365 EAAEYQKLLAQRLKEQRDRRSESMAKRRSKL 457 AAEY +LLA+RL E R++E +R S L Sbjct: 204 AAAEYAQLLAKRLAE---RKAEVRKRRASSL 231
>RS6_LEIMA (Q9NE83) 40S ribosomal protein S6| Length = 249 Score = 109 bits (273), Expect = 5e-24 Identities = 61/145 (42%), Positives = 82/145 (56%), Gaps = 2/145 (1%) Frame = +2 Query: 14 GERRXKSVRGCIVSQDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGK 193 GERR K+VRGC+++ D++++N+ I K G + G+TDT PR GPKRASKI+KLFNL + Sbjct: 93 GERRRKNVRGCVLASDIALVNVTISKVGDQPIEGVTDTTAPRRLGPKRASKIRKLFNLSR 152 Query: 194 DDDVRQYVNTYRRSFTNKKGKTVSKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXXSEAA 373 +DVR+YV RR K KAPKIQRL+TP +E Sbjct: 153 TEDVRKYV--VRRRVVKSGKKDRLKAPKIQRLITPRVKARRAKKAKDAIAKVRASAAERR 210 Query: 374 EYQKLLA--QRLKEQRDRRSESMAK 442 EY +L+A +R QRD + K Sbjct: 211 EYLRLIASNRRALRQRDHSKKHTRK 235
>RS6_LEIIN (O44012) 40S ribosomal protein S6| Length = 249 Score = 109 bits (273), Expect = 5e-24 Identities = 61/145 (42%), Positives = 82/145 (56%), Gaps = 2/145 (1%) Frame = +2 Query: 14 GERRXKSVRGCIVSQDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGK 193 GERR K+VRGC+++ D++++N+ I K G + G+TDT PR GPKRASKI+KLFNL + Sbjct: 93 GERRRKNVRGCVLASDIALVNVTISKVGDQPIEGVTDTTAPRRLGPKRASKIRKLFNLSR 152 Query: 194 DDDVRQYVNTYRRSFTNKKGKTVSKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXXSEAA 373 +DVR+YV RR K KAPKIQRL+TP +E Sbjct: 153 TEDVRKYV--VRRRVVKSGKKDRLKAPKIQRLITPRVKARRAKKAKDAIAKVRASAAERR 210 Query: 374 EYQKLLA--QRLKEQRDRRSESMAK 442 EY +L+A +R QRD + K Sbjct: 211 EYLRLIASNRRALRQRDHSKKHTQK 235
>RS6_ENCCU (Q8SRY0) 40S ribosomal protein S6| Length = 203 Score = 60.8 bits (146), Expect = 3e-09 Identities = 34/93 (36%), Positives = 55/93 (59%) Frame = +2 Query: 5 RRVGERRXKSVRGCIVSQDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFN 184 RR G RR KSVRG IVS+++ V+NL+I++ G+ ++ GLT+ P++ K++K+F Sbjct: 72 RRKGVRRRKSVRGSIVSEEICVLNLIILRPGEKEIDGLTNAVNDVSHLPRKEKKLRKMF- 130 Query: 185 LGKDDDVRQYVNTYRRSFTNKKGKTVSKAPKIQ 283 G D+ + V Y R+ + K PKI+ Sbjct: 131 -GVPDEEKNVVG-YIRNILKSECDDPKKIPKIR 161
>RS6E_METTH (O26360) 30S ribosomal protein S6e| Length = 126 Score = 38.1 bits (87), Expect = 0.019 Identities = 18/43 (41%), Positives = 27/43 (62%) Frame = +2 Query: 5 RRVGERRXKSVRGCIVSQDLSVINLVIVKKGKNDLPGLTDTEK 133 RR GERR K+ RG +S D+ IN V+++KG+ L L ++ Sbjct: 83 RRDGERRRKTFRGNTISDDIVQINTVVIEKGEKPLEELLGADE 125
>RS6E_METJA (P54067) 30S ribosomal protein S6e| Length = 131 Score = 37.0 bits (84), Expect = 0.043 Identities = 17/42 (40%), Positives = 27/42 (64%) Frame = +2 Query: 5 RRVGERRXKSVRGCIVSQDLSVINLVIVKKGKNDLPGLTDTE 130 +R GERR K+VRG ++ D+ IN+ +V+ G+ +P L E Sbjct: 83 KRKGERRRKTVRGNTIAPDIVQINVKVVEYGEKSIPELLGLE 124
>RS6E_METKA (Q8TVE6) 30S ribosomal protein S6e| Length = 130 Score = 34.7 bits (78), Expect = 0.21 Identities = 16/30 (53%), Positives = 22/30 (73%) Frame = +2 Query: 8 RVGERRXKSVRGCIVSQDLSVINLVIVKKG 97 R GERR K+VRG +S+D+ +N VIV+ G Sbjct: 87 RKGERRRKTVRGNTISEDIVQVNTVIVEYG 116
>RS6E_ARCFU (O29739) 30S ribosomal protein S6e| Length = 129 Score = 33.9 bits (76), Expect = 0.37 Identities = 15/29 (51%), Positives = 21/29 (72%) Frame = +2 Query: 14 GERRXKSVRGCIVSQDLSVINLVIVKKGK 100 G R+ K VRG ++S+D+ IN V+VK GK Sbjct: 89 GLRKRKGVRGRVISKDILQINTVVVKHGK 117
>YBK7_YEAST (P38162) Protein YBL107C| Length = 196 Score = 32.3 bits (72), Expect = 1.1 Identities = 19/54 (35%), Positives = 23/54 (42%), Gaps = 2/54 (3%) Frame = +2 Query: 101 NDLPGLTDTEKPRMR--GPKRASKIKKLFNLGKDDDVRQYVNTYRRSFTNKKGK 256 ND P LT R R P + G DD +RQ +N YR+ N K K Sbjct: 23 NDEPSLTTITVTRERCVDPSLIDSFLRFLRHGSDDIIRQKLNNYRKGSINGKNK 76
>RS6E_SULSO (Q980A6) 30S ribosomal protein S6e| Length = 214 Score = 31.6 bits (70), Expect = 1.8 Identities = 13/26 (50%), Positives = 20/26 (76%) Frame = +2 Query: 14 GERRXKSVRGCIVSQDLSVINLVIVK 91 GERR K++RG +SQ++ IN +IV+ Sbjct: 189 GERRRKTIRGNTISQEIVQINTIIVR 214
>RS6E_THEAC (Q9HLA6) 30S ribosomal protein S6e| Length = 124 Score = 30.4 bits (67), Expect = 4.0 Identities = 16/40 (40%), Positives = 23/40 (57%) Frame = +2 Query: 14 GERRXKSVRGCIVSQDLSVINLVIVKKGKNDLPGLTDTEK 133 G R+ +VRG I+ D+S INL IV+ G L D ++ Sbjct: 84 GIRKRITVRGSIIGSDISQINLKIVQYGPTPLEEKKDDQQ 123
>RS6E_SULTO (Q975N7) 30S ribosomal protein S6e| Length = 213 Score = 30.0 bits (66), Expect = 5.3 Identities = 12/26 (46%), Positives = 20/26 (76%) Frame = +2 Query: 14 GERRXKSVRGCIVSQDLSVINLVIVK 91 G RR K+VRG +++QD+ IN +I++ Sbjct: 188 GMRRKKTVRGNMITQDIVQINTIIIR 213
>DNPEP_CAEEL (Q19087) Putative aspartyl aminopeptidase (EC 3.4.11.21)| Length = 470 Score = 29.6 bits (65), Expect = 6.9 Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 3/73 (4%) Frame = +2 Query: 56 QDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKI---KKLFNLGKDDDVRQYVNTY 226 +DLSV LVIVK G+ L D +KP + P A + + F + ++R + T+ Sbjct: 130 RDLSVAGLVIVKNGEKLQHKLIDVKKPVLFIPNLAIHLETDRTTFKPNTETELRPILETF 189 Query: 227 RRSFTNKKGKTVS 265 + N K S Sbjct: 190 AAAGINAPQKPES 202
>MNTB_BACHD (Q9KD30) Manganese transport system ATP-binding protein mntB| Length = 250 Score = 29.3 bits (64), Expect = 9.0 Identities = 18/60 (30%), Positives = 30/60 (50%) Frame = -2 Query: 271 SLAHGLALLVREGPAVCVDILADIIILAKVEELLDLGSPFGSPHPGLLSVSQAWQIILAL 92 +LA L + P V +D+ ++ IIL+ ++EL D G H L V + + +L L Sbjct: 150 ALAQESELFFLDEPFVGIDVTSESIILSLLQELRDRGKTIFVVHHDLSKVEKYFDQVLML 209
>GDA6_WHEAT (P04726) Alpha/beta-gliadin clone PW1215 precursor (Prolamin)| Length = 296 Score = 29.3 bits (64), Expect = 9.0 Identities = 16/45 (35%), Positives = 20/45 (44%) Frame = -1 Query: 497 HLKQRQQEPW*QQKASTSSWPCSHSCGLFAPSTSVQAASGTLQPQ 363 H +QRQQ+P Q G F PS A G++QPQ Sbjct: 211 HQQQRQQQPSSQVSLQQPQQQYPSGQGFFQPSQQNPQAQGSVQPQ 255 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 71,068,502 Number of Sequences: 219361 Number of extensions: 1253033 Number of successful extensions: 4005 Number of sequences better than 10.0: 42 Number of HSP's better than 10.0 without gapping: 3847 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3971 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5216272880 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
