| Clone Name | bags13f10 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_465219.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1614 Score = 571 bits (288), Expect = e-159 Identities = 534/616 (86%) Strand = Plus / Plus Query: 17 acagttgctgctagctcaccatatgctgcagcacaagattcacgccagctgcttccatcc 76 ||||||||||| ||||||||||||||| ||||||||||| |||| ||||||||||| | Sbjct: 886 acagttgctgcaagctcaccatatgctacagcacaagatgcacggcagctgcttccccct 945 Query: 77 gttgttcaattgctcaagaagtatatgcctgggaagaaggtagatgatattaatcacagt 136 |||||||||||||||||||| |||||||||||||||||||| || ||||| || || | | Sbjct: 946 gttgttcaattgctcaagaaatatatgcctgggaagaaggtggaagatatcaaccataat 1005 Query: 137 tatgtcgagtgcttgctatacacttttcaccatttggcccataagacaccaaacactaca 196 ||||| |||||| || | |||| |||||||||||| |||||||||||||||||||| ||| Sbjct: 1006 tatgttgagtgcctgatgtacatttttcaccatttagcccataagacaccaaacaccaca 1065 Query: 197 aacagtctctgtggttacaagatcgttactggacagccatcagatagacttggagaggat 256 ||||| || |||||||||||||| ||||||||||| ||||| |||||||||||||||||| Sbjct: 1066 aacagcctatgtggttacaagattgttactggacaaccatcggatagacttggagaggat 1125 Query: 257 ttctcagaacattacaaagattttatcgagaggctaactggaacggaagacacggttcga 316 |||||||||||||||||||| |||| |||||| |||||||||| ||||| || |||||| Sbjct: 1126 ttctcagaacattacaaagactttacggagaggttaactggaacagaagagacagttcga 1185 Query: 317 gcagcctcgaagagactaacccagggaatggcagatttcaacaaagcaatatcttcagca 376 |||| ||| ||||||||||| ||||| ||||||||||| ||||| ||||||||||||||| Sbjct: 1186 gcagtctcaaagagactaactcaggggatggcagattttaacaaggcaatatcttcagca 1245 Query: 377 aagacagaagaagagaaaactaaaatcaaattggatcagcaaaaatcgacgatgacaatg 436 ||||| |||||||||||||||||||| |||| |||||||| ||||| || ||||||||| Sbjct: 1246 aagactgaagaagagaaaactaaaattaaatctgatcagcagaaatcaacaatgacaatg 1305 Query: 437 cggtcctataataatatattggcaatgtcgcagccattgcatgggaaatctccgttattc 496 || |||| || || ||| | |||||| ||||||| |||| || |||||| || ||||| Sbjct: 1306 agggcctacaacaacatactagcaatggcgcagccgttgcgtgcgaaatcccctttattt 1365 Query: 497 attggtgataagaaagttactctatcatggatggaacaaccaaagaaaccagcagctgca 556 |||||||| |||||| | ||||| ||||||||||| || ||||||||||||||| || || Sbjct: 1366 attggtgacaagaaaatcactctctcatggatggagcagccaaagaaaccagcacctaca 1425 Query: 557 acagcaggagggaagaggacccaacctgttagtaatgggaatgcccctttaaacaagaag 616 ||| |||||||||||||| |||| |||| || |||||||| ||||| | ||||||| Sbjct: 1426 acaacaggagggaagaggtcccagcctgctacaaatgggaacacccctgcgagcaagaag 1485 Query: 617 gggcgaggagatggag 632 ||||| ||||| |||| Sbjct: 1486 gggcggggagagggag 1501
>dbj|AK073608.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033050C22, full insert sequence Length = 1211 Score = 549 bits (277), Expect = e-153 Identities = 532/616 (86%), Gaps = 2/616 (0%) Strand = Plus / Plus Query: 17 acagttgctgctagctcaccatatgctgcagcacaagattcacgccagctgcttccatcc 76 ||||||||||| ||||||||||||||| ||||||||||| |||| ||||||||||| | Sbjct: 89 acagttgctgcaagctcaccatatgctacagcacaagatgcacggcagctgcttccccct 148 Query: 77 gttgttcaattgctcaagaagtatatgcctgggaagaaggtagatgatattaatcacagt 136 |||||||||||||||||||| |||||||||||||||||||| || ||||| || || | | Sbjct: 149 gttgttcaattgctcaagaaatatatgcctgggaagaaggtggaagatatcaaccataat 208 Query: 137 tatgtcgagtgcttgctatacacttttcaccatttggcccataagacaccaaacactaca 196 ||||| |||||| || | |||| |||||||||||| |||||||||||||||||||| ||| Sbjct: 209 tatgttgagtgcctgatgtacatttttcaccatttagcccataagacaccaaacaccaca 268 Query: 197 aacagtctctgtggttacaagatcgttactggacagccatcagatagacttggagaggat 256 ||||| || |||||||||||||| ||||||||||| ||||| |||||||||||||||||| Sbjct: 269 aacagcctatgtggttacaagattgttactggacaaccatcggatagacttggagaggat 328 Query: 257 ttctcagaacattacaaagattttatcgagaggctaactggaacggaagacacggttcga 316 |||||||||||||||||||| |||| |||||| |||| |||| ||||| || |||||| Sbjct: 329 ttctcagaacattacaaagactttacggagaggttaac--gaacagaagagacagttcga 386 Query: 317 gcagcctcgaagagactaacccagggaatggcagatttcaacaaagcaatatcttcagca 376 |||| ||| ||||||||||| ||||| ||||||||||| ||||| ||||||||||||||| Sbjct: 387 gcagtctcaaagagactaactcaggggatggcagattttaacaaggcaatatcttcagca 446 Query: 377 aagacagaagaagagaaaactaaaatcaaattggatcagcaaaaatcgacgatgacaatg 436 ||||| |||||||||||||||||||| |||| |||||||| ||||| || ||||||||| Sbjct: 447 aagactgaagaagagaaaactaaaattaaatctgatcagcagaaatcaacaatgacaatg 506 Query: 437 cggtcctataataatatattggcaatgtcgcagccattgcatgggaaatctccgttattc 496 || |||| || || ||| | |||||| ||||||| |||| || |||||| || ||||| Sbjct: 507 agggcctacaacaacatactagcaatggcgcagccgttgcgtgcgaaatcccctttattt 566 Query: 497 attggtgataagaaagttactctatcatggatggaacaaccaaagaaaccagcagctgca 556 |||||||| |||||| | ||||| ||||||||||| || ||||||||||||||| || || Sbjct: 567 attggtgacaagaaaatcactctctcatggatggagcagccaaagaaaccagcacctaca 626 Query: 557 acagcaggagggaagaggacccaacctgttagtaatgggaatgcccctttaaacaagaag 616 ||| |||||||||||||| |||| |||| || |||||||| ||||| | ||||||| Sbjct: 627 acaacaggagggaagaggtcccagcctgctacaaatgggaacacccctgcgagcaagaag 686 Query: 617 gggcgaggagatggag 632 ||||| ||||| |||| Sbjct: 687 gggcggggagagggag 702
>gb|AY105289.1| Zea mays PCO103565 mRNA sequence Length = 2186 Score = 509 bits (257), Expect = e-141 Identities = 538/632 (85%), Gaps = 6/632 (0%) Strand = Plus / Plus Query: 32 tcaccatatgctgcagcacaagattcacgccagctgcttccatccgttgttcaattgctc 91 ||||||||||||||||||||||||||||| |||||||||||||| |||||||| || ||| Sbjct: 975 tcaccatatgctgcagcacaagattcacgtcagctgcttccatctgttgttcagttactc 1034 Query: 92 aagaagtatatgcctgggaagaaggtagatgatattaatcacagttatgtcgagtgcttg 151 |||||||||||||||||||||||||| || ||||| || || | |||||| ||||||||| Sbjct: 1035 aagaagtatatgcctgggaagaaggtggaagatatcaaccataattatgttgagtgcttg 1094 Query: 152 ctatacacttttcaccatttggcccataagacaccaaacactacaaacagtctctgtggt 211 |||||||||||||| |||||||| || ||||| |||||||| || |||||||| |||||| Sbjct: 1095 ctatacacttttcatcatttggctcacaagactccaaacacaacgaacagtctatgtggt 1154 Query: 212 tacaagatcgttactggacagccatcagatagacttggagaggatttctcagaacattac 271 |||||||| |||||||| || ||||||||||||||||||||||| |||||||| |||||| Sbjct: 1155 tacaagattgttactgggcaaccatcagatagacttggagaggacttctcagagcattac 1214 Query: 272 aaagattttatcgagaggctaactggaacggaagacacggttcgagcagcctcgaagaga 331 |||||||| | |||||| |||||||||| ||||| ||||| ||||||||||| ||| || Sbjct: 1215 aaagatttcacagagaggttaactggaacagaagagacggtacgagcagcctcaaagcga 1274 Query: 332 ctaacccagggaatggcagatttcaacaaagcaatatcttcagcaaagacagaagaagag 391 ||||| ||||| ||||||||||||||||| ||||||||||||||||| || || || || Sbjct: 1275 ctaactcaggggatggcagatttcaacaaggcaatatcttcagcaaaaactgacgaggaa 1334 Query: 392 aaaactaaaatcaaattggatcagcaaaaatcgacgatgacaatgcggtcctataataat 451 || |||||||| ||| |||||||||| || || | ||||||| |||| ||||| ||| Sbjct: 1335 aagactaaaattaaaggcgatcagcaaacttcaacaaggacaatgaggtcatataacaat 1394 Query: 452 atattggcaatgtcgcagccattgcatgggaaatctccgttattcattggtgataagaaa 511 |||||||||||| | ||| |||||||| ||||| || ||||| || |||||||||||| Sbjct: 1395 atattggcaatgacacagtcattgcattcaaaatcccctttatttatcggtgataagaaa 1454 Query: 512 gttactctatcatggatggaacaaccaaagaaaccagcagctgcaacagcaggagggaag 571 | ||||| ||||||||||| || || || ||| |||||||| | | |||||| |||||| Sbjct: 1455 atcactctgtcatggatggagcagcccaacaaagcagcagctacgaaagcaggggggaag 1514 Query: 572 aggacccaacctgttagtaatgggaatgcccctttaaacaagaaggggcgaggagatgga 631 ||| | |||||| || |||||||||| |||| ||||||||||||| || ||| Sbjct: 1515 aggtcacaacctagtacaaatgggaatgaccctgcaaacaagaaggggaga------gga 1568 Query: 632 ggaatgcacaatcagctcgtgaacagagcttt 663 |||||||| || ||||| |||||||||||||| Sbjct: 1569 ggaatgcaaaaccagctagtgaacagagcttt 1600
>gb|BT018871.1| Zea mays clone EL01N0562H06.d mRNA sequence Length = 1711 Score = 456 bits (230), Expect = e-125 Identities = 533/633 (84%), Gaps = 7/633 (1%) Strand = Plus / Plus Query: 32 tcaccatatgctgcagcacaagattcacgccagctgcttccatccgttgttcaattgctc 91 ||||||||||||||||||||||||||||| |||||||||||||| |||||||| || ||| Sbjct: 737 tcaccatatgctgcagcacaagattcacgtcagctgcttccatctgttgttcagttactc 796 Query: 92 aagaagtatatgcctgggaagaaggtagatgatattaatcacagttatgtcgagtgcttg 151 |||||||||||||||||| ||||||| || ||||| || || | |||||| ||||||||| Sbjct: 797 aagaagtatatgcctggggagaaggtggaagatatcaaccataattatgttgagtgcttg 856 Query: 152 ctatacacttttcaccatttggcc-cataagacaccaaacactacaaacagtctctgtgg 210 |||||||||||||| ||||||| | || ||||| |||||||| || ||| | | ||||| Sbjct: 857 ctatacacttttcatcatttgggctcacaagactccaaacacaacgaaccttttatgtgg 916 Query: 211 ttacaagatcgttactggacagccatcagatagacttggagaggatttctcagaacatta 270 ||||||||| |||||||| || |||||| |||||||||||||||| |||||||| ||||| Sbjct: 917 ttacaagattgttactgggcaaccatcacatagacttggagaggacttctcagagcatta 976 Query: 271 caaagattttatcgagaggctaactggaacggaagacacggttcgagcagcctcgaagag 330 ||||||||| | |||||| |||||||||| ||||| ||||| ||||||||||| ||| | Sbjct: 977 caaagatttcacagagaggttaactggaacagaagagacggtacgagcagcctcaaagcg 1036 Query: 331 actaacccagggaatggcagatttcaacaaagcaatatcttcagcaaagacagaagaaga 390 |||||| ||||| ||||||||||||||||| ||||||||||||||||| || || || || Sbjct: 1037 actaactcaggggatggcagatttcaacaaggcaatatcttcagcaaaaactgacgagga 1096 Query: 391 gaaaactaaaatcaaattggatcagcaaaaatcgacgatgacaatgcggtcctataataa 450 || |||||||| ||| |||||||||| || || | ||||||| |||| ||||| || Sbjct: 1097 aaagactaaaattaaaggcgatcagcaaacttcaacaaggacaatgaggtcatataacaa 1156 Query: 451 tatattggcaatgtcgcagccattgcatgggaaatctccgttattcattggtgataagaa 510 ||||||||||||| | ||| |||||||| ||||| || ||||| || ||||||||||| Sbjct: 1157 tatattggcaatgacacagtcattgcattcaaaatcccctttatttatcggtgataagaa 1216 Query: 511 agttactctatcatggatggaacaaccaaagaaaccagcagctgcaacagcaggagggaa 570 | | ||||| ||||||||||| || || || ||| |||||||| | | |||||| ||||| Sbjct: 1217 aatcactctgtcatggatggagcagcccaacaaagcagcagctacgaaagcaggggggaa 1276 Query: 571 gaggacccaacctgttagtaatgggaatgcccctttaaacaagaaggggcgaggagatgg 630 |||| | |||||| || |||||||||| |||| ||||||||||||| || || Sbjct: 1277 gaggtcacaacctagtacaaatgggaatgaccctgcaaacaagaaggggaga------gg 1330 Query: 631 aggaatgcacaatcagctcgtgaacagagcttt 663 ||||||||| || ||||| |||||||||||||| Sbjct: 1331 aggaatgcaaaaccagctagtgaacagagcttt 1363
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 147 bits (74), Expect = 5e-32 Identities = 95/102 (93%) Strand = Plus / Plus Query: 180 agacaccaaacactacaaacagtctctgtggttacaagatcgttactggacagccatcag 239 ||||||||||||| |||||||| || |||||||||||||| ||||||||||| ||||| | Sbjct: 12371085 agacaccaaacaccacaaacagcctatgtggttacaagattgttactggacaaccatcgg 12371144 Query: 240 atagacttggagaggatttctcagaacattacaaagatttta 281 ||||||||||||||||||||||||||||||||||||| |||| Sbjct: 12371145 atagacttggagaggatttctcagaacattacaaagacttta 12371186 Score = 143 bits (72), Expect = 8e-31 Identities = 102/112 (91%) Strand = Plus / Plus Query: 291 taactggaacggaagacacggttcgagcagcctcgaagagactaacccagggaatggcag 350 |||||||||| ||||| || |||||||||| ||| ||||||||||| ||||| ||||||| Sbjct: 12372143 taactggaacagaagagacagttcgagcagtctcaaagagactaactcaggggatggcag 12372202 Query: 351 atttcaacaaagcaatatcttcagcaaagacagaagaagagaaaactaaaat 402 |||| ||||| |||||||||||||||||||| |||||||||||||||||||| Sbjct: 12372203 attttaacaaggcaatatcttcagcaaagactgaagaagagaaaactaaaat 12372254 Score = 99.6 bits (50), Expect = 1e-17 Identities = 71/78 (91%) Strand = Plus / Plus Query: 17 acagttgctgctagctcaccatatgctgcagcacaagattcacgccagctgcttccatcc 76 ||||||||||| ||||||||||||||| ||||||||||| |||| ||||||||||| | Sbjct: 12370686 acagttgctgcaagctcaccatatgctacagcacaagatgcacggcagctgcttccccct 12370745 Query: 77 gttgttcaattgctcaag 94 |||||||||||||||||| Sbjct: 12370746 gttgttcaattgctcaag 12370763 Score = 75.8 bits (38), Expect = 2e-10 Identities = 83/98 (84%) Strand = Plus / Plus Query: 467 cagccattgcatgggaaatctccgttattcattggtgataagaaagttactctatcatgg 526 ||||| |||| || |||||| || ||||| |||||||| |||||| | ||||| |||||| Sbjct: 12373518 cagccgttgcgtgcgaaatcccctttatttattggtgacaagaaaatcactctctcatgg 12373577 Query: 527 atggaacaaccaaagaaaccagcagctgcaacagcagg 564 ||||| || ||||||||||||||| || ||||| |||| Sbjct: 12373578 atggagcagccaaagaaaccagcacctacaacaacagg 12373615 Score = 73.8 bits (37), Expect = 6e-10 Identities = 76/89 (85%) Strand = Plus / Plus Query: 93 agaagtatatgcctgggaagaaggtagatgatattaatcacagttatgtcgagtgcttgc 152 |||| |||||||||||||||||||| || ||||| || || | |||||| |||||| || Sbjct: 12370915 agaaatatatgcctgggaagaaggtggaagatatcaaccataattatgttgagtgcctga 12370974 Query: 153 tatacacttttcaccatttggcccataag 181 | |||| |||||||||||| ||||||||| Sbjct: 12370975 tgtacatttttcaccatttagcccataag 12371003
>dbj|AP004891.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0705A04 Length = 182468 Score = 147 bits (74), Expect = 5e-32 Identities = 95/102 (93%) Strand = Plus / Plus Query: 180 agacaccaaacactacaaacagtctctgtggttacaagatcgttactggacagccatcag 239 ||||||||||||| |||||||| || |||||||||||||| ||||||||||| ||||| | Sbjct: 51222 agacaccaaacaccacaaacagcctatgtggttacaagattgttactggacaaccatcgg 51281 Query: 240 atagacttggagaggatttctcagaacattacaaagatttta 281 ||||||||||||||||||||||||||||||||||||| |||| Sbjct: 51282 atagacttggagaggatttctcagaacattacaaagacttta 51323 Score = 143 bits (72), Expect = 8e-31 Identities = 102/112 (91%) Strand = Plus / Plus Query: 291 taactggaacggaagacacggttcgagcagcctcgaagagactaacccagggaatggcag 350 |||||||||| ||||| || |||||||||| ||| ||||||||||| ||||| ||||||| Sbjct: 52280 taactggaacagaagagacagttcgagcagtctcaaagagactaactcaggggatggcag 52339 Query: 351 atttcaacaaagcaatatcttcagcaaagacagaagaagagaaaactaaaat 402 |||| ||||| |||||||||||||||||||| |||||||||||||||||||| Sbjct: 52340 attttaacaaggcaatatcttcagcaaagactgaagaagagaaaactaaaat 52391 Score = 99.6 bits (50), Expect = 1e-17 Identities = 71/78 (91%) Strand = Plus / Plus Query: 17 acagttgctgctagctcaccatatgctgcagcacaagattcacgccagctgcttccatcc 76 ||||||||||| ||||||||||||||| ||||||||||| |||| ||||||||||| | Sbjct: 50823 acagttgctgcaagctcaccatatgctacagcacaagatgcacggcagctgcttccccct 50882 Query: 77 gttgttcaattgctcaag 94 |||||||||||||||||| Sbjct: 50883 gttgttcaattgctcaag 50900 Score = 75.8 bits (38), Expect = 2e-10 Identities = 83/98 (84%) Strand = Plus / Plus Query: 467 cagccattgcatgggaaatctccgttattcattggtgataagaaagttactctatcatgg 526 ||||| |||| || |||||| || ||||| |||||||| |||||| | ||||| |||||| Sbjct: 53655 cagccgttgcgtgcgaaatcccctttatttattggtgacaagaaaatcactctctcatgg 53714 Query: 527 atggaacaaccaaagaaaccagcagctgcaacagcagg 564 ||||| || ||||||||||||||| || ||||| |||| Sbjct: 53715 atggagcagccaaagaaaccagcacctacaacaacagg 53752 Score = 73.8 bits (37), Expect = 6e-10 Identities = 76/89 (85%) Strand = Plus / Plus Query: 93 agaagtatatgcctgggaagaaggtagatgatattaatcacagttatgtcgagtgcttgc 152 |||| |||||||||||||||||||| || ||||| || || | |||||| |||||| || Sbjct: 51052 agaaatatatgcctgggaagaaggtggaagatatcaaccataattatgttgagtgcctga 51111 Query: 153 tatacacttttcaccatttggcccataag 181 | |||| |||||||||||| ||||||||| Sbjct: 51112 tgtacatttttcaccatttagcccataag 51140
>gb|BT014590.1| Lycopersicon esculentum clone 134055R, mRNA sequence Length = 2075 Score = 91.7 bits (46), Expect = 3e-15 Identities = 85/98 (86%) Strand = Plus / Plus Query: 164 caccatttggcccataagacaccaaacactacaaacagtctctgtggttacaagatcgtt 223 |||||||| || || ||||| ||||| | ||||||||||||||||| |||||||| || Sbjct: 1141 caccatttagctcacaagactccaaatgccacaaacagtctctgtgggtacaagattgtc 1200 Query: 224 actggacagccatcagatagacttggagaggatttctc 261 |||||||| |||||||||||||| || ||||||||||| Sbjct: 1201 actggacaaccatcagatagactgggggaggatttctc 1238
>ref|NM_102644.3| Arabidopsis thaliana unknown protein AT1G29030 mRNA, complete cds Length = 1911 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 212 tacaagatcgttactggacagccatcagatagacttggagaggatttctcaga 264 |||||||| || ||||| ||||||||||||||||| || ||||| |||||||| Sbjct: 1192 tacaagatagtgactgggcagccatcagatagactcggggaggacttctcaga 1244
>gb|BT005592.1| Arabidopsis thaliana clone U50638 unknown protein (At1g29030) mRNA, complete cds Length = 1702 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 212 tacaagatcgttactggacagccatcagatagacttggagaggatttctcaga 264 |||||||| || ||||| ||||||||||||||||| || ||||| |||||||| Sbjct: 1099 tacaagatagtgactgggcagccatcagatagactcggggaggacttctcaga 1151
>gb|AC007508.2|AC007508 Genomic sequence for Arabidopsis thaliana BAC F1K23 from chromosome I, complete sequence Length = 101305 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 212 tacaagatcgttactggacagccatcagatagacttggagaggatttctcaga 264 |||||||| || ||||| ||||||||||||||||| || ||||| |||||||| Sbjct: 1967 tacaagatagtgactgggcagccatcagatagactcggggaggacttctcaga 2019
>gb|AC021043.4|AC021043 Arabidopsis thaliana chromosome I BAC F28N24 genomic sequence, complete sequence Length = 154716 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 212 tacaagatcgttactggacagccatcagatagacttggagaggatttctcaga 264 |||||||| || ||||| ||||||||||||||||| || ||||| |||||||| Sbjct: 133206 tacaagatagtgactgggcagccatcagatagactcggggaggacttctcaga 133258
>dbj|AK118244.1| Arabidopsis thaliana At1g29030 mRNA for unknown protein, complete cds, clone: RAFL19-55-A05 Length = 1913 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 212 tacaagatcgttactggacagccatcagatagacttggagaggatttctcaga 264 |||||||| || ||||| ||||||||||||||||| || ||||| |||||||| Sbjct: 1192 tacaagatagtgactgggcagccatcagatagactcggggaggacttctcaga 1244
>dbj|AB188110.1| Rana catesbeiana CRFR-1 mRNA for cortcotropin releasing factor receptor type 1, complete cds Length = 2275 Score = 48.1 bits (24), Expect = 0.037 Identities = 24/24 (100%) Strand = Plus / Plus Query: 494 ttcattggtgataagaaagttact 517 |||||||||||||||||||||||| Sbjct: 1764 ttcattggtgataagaaagttact 1787
>gb|AC104012.11| Homo sapiens chromosome 8, clone RP11-281N10, complete sequence Length = 170668 Score = 44.1 bits (22), Expect = 0.58 Identities = 28/30 (93%) Strand = Plus / Minus Query: 367 atcttcagcaaagacagaagaagagaaaac 396 ||||||| ||||||||||| |||||||||| Sbjct: 108874 atcttcaccaaagacagaaaaagagaaaac 108845
>ref|NM_179893.1| Arabidopsis thaliana unknown protein AT2G34040 transcript variant AT2G34040.2 mRNA, complete cds Length = 1436 Score = 42.1 bits (21), Expect = 2.3 Identities = 60/73 (82%) Strand = Plus / Plus Query: 192 ctacaaacagtctctgtggttacaagatcgttactggacagccatcagatagacttggag 251 |||||||||| | ||||| |||||||| || || || ||||||||||| ||| | || | Sbjct: 1161 ctacaaacagcttgtgtgggtacaagattgtgaccggccagccatcagacagattggggg 1220 Query: 252 aggatttctcaga 264 |||| |||||||| Sbjct: 1221 aggacttctcaga 1233
>ref|NM_128955.2| Arabidopsis thaliana unknown protein AT2G34040 transcript variant AT2G34040.1 mRNA, complete cds Length = 1963 Score = 42.1 bits (21), Expect = 2.3 Identities = 60/73 (82%) Strand = Plus / Plus Query: 192 ctacaaacagtctctgtggttacaagatcgttactggacagccatcagatagacttggag 251 |||||||||| | ||||| |||||||| || || || ||||||||||| ||| | || | Sbjct: 1161 ctacaaacagcttgtgtgggtacaagattgtgaccggccagccatcagacagattggggg 1220 Query: 252 aggatttctcaga 264 |||| |||||||| Sbjct: 1221 aggacttctcaga 1233
>ref|XM_479728.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2008 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 377 aagacagaagaagagaaaact 397 ||||||||||||||||||||| Sbjct: 1727 aagacagaagaagagaaaact 1747
>ref|XM_507092.1| PREDICTED Oryza sativa (japonica cultivar-group), P0007D08.23 mRNA Length = 2338 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 377 aagacagaagaagagaaaact 397 ||||||||||||||||||||| Sbjct: 2057 aagacagaagaagagaaaact 2077
>ref|XM_451840.1| Kluyveromyces lactis NRRL Y-1140, KLLA0B06952g predicted mRNA Length = 2685 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 543 aaccagcagctgcaacagcag 563 ||||||||||||||||||||| Sbjct: 187 aaccagcagctgcaacagcag 207
>emb|CR407546.16| Zebrafish DNA sequence from clone CH211-276E3 in linkage group 17, complete sequence Length = 103614 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 339 agggaatggcagatttcaaca 359 ||||||||||||||||||||| Sbjct: 91620 agggaatggcagatttcaaca 91640
>gb|BT010389.1| Arabidopsis thaliana At2g34040 mRNA, complete cds Length = 1662 Score = 42.1 bits (21), Expect = 2.3 Identities = 60/73 (82%) Strand = Plus / Plus Query: 192 ctacaaacagtctctgtggttacaagatcgttactggacagccatcagatagacttggag 251 |||||||||| | ||||| |||||||| || || || ||||||||||| ||| | || | Sbjct: 1079 ctacaaacagcttgtgtgggtacaagattgtgaccggccagccatcagacagattggggg 1138 Query: 252 aggatttctcaga 264 |||| |||||||| Sbjct: 1139 aggacttctcaga 1151
>gb|AC182644.4| Pan troglodytes BAC clone CH251-64L5 from chromosome 4, complete sequence Length = 157801 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 375 caaagacagaagaagagaaaa 395 ||||||||||||||||||||| Sbjct: 43217 caaagacagaagaagagaaaa 43197
>emb|AL157837.10| Human DNA sequence from clone RP11-467I21 on chromosome 1q31.1-31.3 Contains a ribosomal protein L23a (RPL23A) pseudogene, complete sequence Length = 139485 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 592 tgggaatgcccctttaaacaa 612 ||||||||||||||||||||| Sbjct: 98426 tgggaatgcccctttaaacaa 98446
>emb|CR382122.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome B of strain NRRL Y-1140 of Kluyveromyces lactis Length = 1320834 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 543 aaccagcagctgcaacagcag 563 ||||||||||||||||||||| Sbjct: 606880 aaccagcagctgcaacagcag 606900
>gb|AC002341.3| Arabidopsis thaliana chromosome 2 clone T14G11 map TEn5, complete sequence Length = 82484 Score = 42.1 bits (21), Expect = 2.3 Identities = 60/73 (82%) Strand = Plus / Minus Query: 192 ctacaaacagtctctgtggttacaagatcgttactggacagccatcagatagacttggag 251 |||||||||| | ||||| |||||||| || || || ||||||||||| ||| | || | Sbjct: 29750 ctacaaacagcttgtgtgggtacaagattgtgaccggccagccatcagacagattggggg 29691 Query: 252 aggatttctcaga 264 |||| |||||||| Sbjct: 29690 aggacttctcaga 29678
>gb|AC090338.6| Homo sapiens chromosome 18, clone RP11-704C2, complete sequence Length = 200525 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 376 aaagacagaagaagagaaaac 396 ||||||||||||||||||||| Sbjct: 200415 aaagacagaagaagagaaaac 200395
>gb|AC090812.5| Homo sapiens chromosome 18, clone RP11-59J7, complete sequence Length = 176873 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 376 aaagacagaagaagagaaaac 396 ||||||||||||||||||||| Sbjct: 10797 aaagacagaagaagagaaaac 10777
>gb|AC015617.8| Homo sapiens, clone RP11-45H23, complete sequence Length = 160541 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 376 aaagacagaagaagagaaaac 396 ||||||||||||||||||||| Sbjct: 45018 aaagacagaagaagagaaaac 45038
>gb|AC018692.9| Homo sapiens BAC clone RP11-555K2 from 4, complete sequence Length = 189789 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 375 caaagacagaagaagagaaaa 395 ||||||||||||||||||||| Sbjct: 59513 caaagacagaagaagagaaaa 59533
>gb|AC018687.6| Homo sapiens BAC clone RP11-462G22 from 4, complete sequence Length = 156378 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 375 caaagacagaagaagagaaaa 395 ||||||||||||||||||||| Sbjct: 99850 caaagacagaagaagagaaaa 99870
>ref|XM_686790.1| PREDICTED: Danio rerio similar to Histone H1.5 (Histone H1a) (LOC563431), mRNA Length = 606 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 537 caaagaaaccagcagctgcaa 557 ||||||||||||||||||||| Sbjct: 485 caaagaaaccagcagctgcaa 505
>emb|BX322617.9| Zebrafish DNA sequence from clone DKEY-33D4, complete sequence Length = 206855 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 339 agggaatggcagatttcaaca 359 ||||||||||||||||||||| Sbjct: 28104 agggaatggcagatttcaaca 28084
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 377 aagacagaagaagagaaaact 397 ||||||||||||||||||||| Sbjct: 513596 aagacagaagaagagaaaact 513576
>gb|AY085219.1| Arabidopsis thaliana clone 13928 mRNA, complete sequence Length = 1946 Score = 42.1 bits (21), Expect = 2.3 Identities = 60/73 (82%) Strand = Plus / Plus Query: 192 ctacaaacagtctctgtggttacaagatcgttactggacagccatcagatagacttggag 251 |||||||||| | ||||| |||||||| || || || ||||||||||| ||| | || | Sbjct: 1144 ctacaaacagcttgtgtgggtacaagattgtgaccggccagccatcagacagattggggg 1203 Query: 252 aggatttctcaga 264 |||| |||||||| Sbjct: 1204 aggacttctcaga 1216
>dbj|AP004584.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0007D08 Length = 183142 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 377 aagacagaagaagagaaaact 397 ||||||||||||||||||||| Sbjct: 103556 aagacagaagaagagaaaact 103536
>dbj|AK073752.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033068G24, full insert sequence Length = 2337 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 377 aagacagaagaagagaaaact 397 ||||||||||||||||||||| Sbjct: 2056 aagacagaagaagagaaaact 2076
>dbj|AK071992.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091K21, full insert sequence Length = 2008 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 377 aagacagaagaagagaaaact 397 ||||||||||||||||||||| Sbjct: 1727 aagacagaagaagagaaaact 1747
>gb|BT002051.1| Arabidopsis thaliana expressed protein (At2g34040) mRNA, complete cds Length = 1928 Score = 42.1 bits (21), Expect = 2.3 Identities = 60/73 (82%) Strand = Plus / Plus Query: 192 ctacaaacagtctctgtggttacaagatcgttactggacagccatcagatagacttggag 251 |||||||||| | ||||| |||||||| || || || ||||||||||| ||| | || | Sbjct: 1161 ctacaaacagcttgtgtgggtacaagattgtgaccggccagccatcagacagattggggg 1220 Query: 252 aggatttctcaga 264 |||| |||||||| Sbjct: 1221 aggacttctcaga 1233
>gb|AC153385.3| Mus musculus 6 BAC RP23-64D14 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 226269 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 258 tctcagaacattacaaagatttta 281 |||||||||||| ||||||||||| Sbjct: 127142 tctcagaacatttcaaagatttta 127119
>gb|AC162171.7| Mus musculus chromosome 5, clone RP23-143N11, complete sequence Length = 229553 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 385 agaagagaaaactaaaatcaaatt 408 ||||||||||||||||| |||||| Sbjct: 98903 agaagagaaaactaaaaccaaatt 98880
>gb|AY368673.1| Triticum turgidum HMW-glutenin locus, complete sequence Length = 285506 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 540 agaaaccagcagctgcaacagcag 563 ||||||||||||| |||||||||| Sbjct: 189745 agaaaccagcagcagcaacagcag 189722
>ref|XM_583070.2| PREDICTED: Bos taurus similar to CG7206-PA, isoform A (LOC506599), partial mRNA Length = 3572 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 agaagagaaaactaaaatca 404 |||||||||||||||||||| Sbjct: 155 agaagagaaaactaaaatca 174
>gb|BC014903.1| Homo sapiens F-box protein 8, mRNA (cDNA clone IMAGE:3910914), partial cds Length = 2265 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 540 agaaaccagcagctgcaaca 559 |||||||||||||||||||| Sbjct: 878 agaaaccagcagctgcaaca 897
>gb|BC040456.1| Homo sapiens F-box protein 8, mRNA (cDNA clone MGC:23836 IMAGE:4281341), complete cds Length = 1573 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 540 agaaaccagcagctgcaaca 559 |||||||||||||||||||| Sbjct: 294 agaaaccagcagctgcaaca 313
>ref|NM_012180.2| Homo sapiens F-box protein 8 (FBXO8), mRNA Length = 2564 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 540 agaaaccagcagctgcaaca 559 |||||||||||||||||||| Sbjct: 878 agaaaccagcagctgcaaca 897
>ref|XM_843479.1| PREDICTED: Canis familiaris similar to dynein, axonemal, heavy polypeptide 5 (LOC606983), mRNA Length = 13929 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 370 ttcagcaaagacagaagaag 389 |||||||||||||||||||| Sbjct: 2796 ttcagcaaagacagaagaag 2815
>gb|AY512957.1| Mus musculus clone NIA:K0959G01 unknown mRNA Length = 2320 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 556 aacagcaggagggaagagga 575 |||||||||||||||||||| Sbjct: 2185 aacagcaggagggaagagga 2204
>gb|AY358721.1| Homo sapiens clone DNA88001 FBXO8 (UNQ1877) mRNA, complete cds Length = 1636 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 540 agaaaccagcagctgcaaca 559 |||||||||||||||||||| Sbjct: 264 agaaaccagcagctgcaaca 283
>ref|XM_672195.1| Plasmodium berghei strain ANKA nonclathrin coat protein zeta2-cop-related protein (PB000302.01.0) partial mRNA Length = 159 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 aagcaatatcttcagcaaag 379 |||||||||||||||||||| Sbjct: 104 aagcaatatcttcagcaaag 123
>gb|AC143357.1| Pan troglodytes BAC clone RP43-171L24 from 7, complete sequence Length = 181482 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 255 atttctcagaacattacaaa 274 |||||||||||||||||||| Sbjct: 48595 atttctcagaacattacaaa 48614
>emb|AL591718.14| Human DNA sequence from clone RP11-399A15 on chromosome 6 Contains the 5' end of HCRTR2 gene for hypocretin (orexin) receptor 2, complete sequence Length = 159698 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 376 aaagacagaagaagagaaaa 395 |||||||||||||||||||| Sbjct: 70692 aaagacagaagaagagaaaa 70711
>emb|AL591504.5| Human DNA sequence from clone RP11-445J9 on chromosome 1 Contains a novel gene, complete sequence Length = 150599 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 556 aacagcaggagggaagagga 575 |||||||||||||||||||| Sbjct: 69046 aacagcaggagggaagagga 69027
>emb|AL590550.8| Human DNA sequence from clone RP11-398B19 on chromosome 6, complete sequence Length = 60406 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 535 accaaagaaaccagcagctg 554 |||||||||||||||||||| Sbjct: 27739 accaaagaaaccagcagctg 27720
>emb|AL355354.20| Human DNA sequence from clone RP11-424A16 on chromosome 6 Contains a NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5 (13kD B13) (NDUFA5) (B13 NUFM UQOR13 FLJ12147 CI-13KD-B) pseudogene, complete sequence Length = 52994 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 383 gaagaagagaaaactaaaat 402 |||||||||||||||||||| Sbjct: 3444 gaagaagagaaaactaaaat 3425
>emb|AL158836.16| Human DNA sequence from clone RP5-1135P13 on chromosome 10p14-15.3, complete sequence Length = 62496 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 381 cagaagaagagaaaactaaaatca 404 |||||| ||||||||||||||||| Sbjct: 20694 cagaagcagagaaaactaaaatca 20717
>emb|AL096840.25|HSJ1077B9 Human DNA sequence from clone RP5-1077B9 on chromosome 1p36.11-36.32 Contains the 5' end of a novel gene, the PLOD gene for procollagen-lysine, 2-oxoglutarate 5-dioxygenase (lysine hydroxylase, Ehlers-Danlos syndrome type VI), the MFN2 gene for mitofusin 2 and a novel gene, complete sequence Length = 126525 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 ttcaacaaagcaatatcttc 372 |||||||||||||||||||| Sbjct: 16939 ttcaacaaagcaatatcttc 16958
>emb|AL096800.20|HSDJ303A1 Human DNA sequence from clone RP1-303A1 on chromosome 6 Contains a coxsackie virus and adenovirus receptor (CXADR) pseudogene, a 1-phosphatidylinositol-4-phosphate-5-kinase (PTPDINS(4)P-5-kinase, EC 2.7.1.68) pseudogene, the 3' end of gene FLJ21789 for the ortholog of mouse muted and a CpG island, complete sequence Length = 104531 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 372 cagcaaagacagaagaagagaaaa 395 ||||||||| |||||||||||||| Sbjct: 14547 cagcaaagagagaagaagagaaaa 14524
>gb|AE008893.1| Salmonella typhimurium LT2, section 197 of 220 of the complete genome Length = 20178 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 392 aaaactaaaatcaaattggatcag 415 |||||||||||| ||||||||||| Sbjct: 4394 aaaactaaaatcgaattggatcag 4371
>gb|AC165290.2| Mus musculus BAC clone RP23-343A4 from chromosome 13, complete sequence Length = 206249 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 543 aaccagcagctgcaacagcaggag 566 |||||||||| ||||||||||||| Sbjct: 27485 aaccagcagcagcaacagcaggag 27462
>emb|AL591065.17| Mouse DNA sequence from clone RP23-199H17 on chromosome 11 Contains the Myo18a gene for myosin XVIIIa, the Pipox gene for pipecolic acid oxidase, a novel gene (LOC327969), the 5' end of the Sez6 gene for seizure related gene 6 and two CpG islands, complete sequence Length = 220176 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 556 aacagcaggagggaagagga 575 |||||||||||||||||||| Sbjct: 34274 aacagcaggagggaagagga 34255
>gb|BC035631.1| Homo sapiens solute carrier family 39 (metal ion transporter), member 11, mRNA (cDNA clone MGC:45399 IMAGE:5219031), complete cds Length = 2800 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 121 tgatattaatcacagttatg 140 |||||||||||||||||||| Sbjct: 2716 tgatattaatcacagttatg 2697
>emb|CR788323.5| Zebrafish DNA sequence from clone DKEYP-71G11 in linkage group 2, complete sequence Length = 107248 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 557 acagcaggagggaagaggac 576 |||||||||||||||||||| Sbjct: 49116 acagcaggagggaagaggac 49135
>gb|AC161583.2| Mus musculus BAC clone RP24-566C13 from chromosome 12, complete sequence Length = 171366 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 564 gagggaagaggacccaacct 583 |||||||||||||||||||| Sbjct: 61986 gagggaagaggacccaacct 61967
>gb|AC156615.7| Mus musculus chromosome 3, clone RP23-1B20, complete sequence Length = 210003 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 538 aaagaaaccagcagctgcaacagcagga 565 ||||||| ||||||| |||||||||||| Sbjct: 59655 aaagaaagcagcagcagcaacagcagga 59682
>gb|AC090324.7| Homo sapiens chromosome 18, clone RP11-693L9, complete sequence Length = 154516 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 373 agcaaagacagaagaagaga 392 |||||||||||||||||||| Sbjct: 49768 agcaaagacagaagaagaga 49749
>gb|AC025566.22| Homo sapiens 3 BAC RP11-501O2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 200398 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 379 gacagaagaagagaaaacta 398 |||||||||||||||||||| Sbjct: 20223 gacagaagaagagaaaacta 20242
>emb|CR621638.1| full-length cDNA clone CS0DC029YC07 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1678 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 540 agaaaccagcagctgcaaca 559 |||||||||||||||||||| Sbjct: 872 agaaaccagcagctgcaaca 891
>dbj|AK123740.1| Homo sapiens cDNA FLJ41746 fis, clone HSYRA2006049, highly similar to Homo sapiens F-box protein Fbx8 (FBX8) mRNA Length = 2263 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 540 agaaaccagcagctgcaaca 559 |||||||||||||||||||| Sbjct: 891 agaaaccagcagctgcaaca 910
>emb|CR620476.1| full-length cDNA clone CS0DI016YF16 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1625 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 540 agaaaccagcagctgcaaca 559 |||||||||||||||||||| Sbjct: 281 agaaaccagcagctgcaaca 300
>emb|CR620156.1| full-length cDNA clone CS0DK004YA21 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 1929 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 540 agaaaccagcagctgcaaca 559 |||||||||||||||||||| Sbjct: 281 agaaaccagcagctgcaaca 300
>emb|CR617381.1| full-length cDNA clone CS0DI001YH17 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1625 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 540 agaaaccagcagctgcaaca 559 |||||||||||||||||||| Sbjct: 281 agaaaccagcagctgcaaca 300
>dbj|AK095227.1| Homo sapiens cDNA FLJ37908 fis, clone CTONG1000010, weakly similar to GUFA PROTEIN Length = 2752 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 121 tgatattaatcacagttatg 140 |||||||||||||||||||| Sbjct: 2732 tgatattaatcacagttatg 2713
>emb|CR592920.1| full-length cDNA clone CS0DM007YO16 of Fetal liver of Homo sapiens (human) Length = 1587 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 540 agaaaccagcagctgcaaca 559 |||||||||||||||||||| Sbjct: 248 agaaaccagcagctgcaaca 267
>dbj|AP007167.1| Aspergillus oryzae RIB40 genomic DNA, SC020 Length = 1824958 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 376 aaagacagaagaagagaaaa 395 |||||||||||||||||||| Sbjct: 1054956 aaagacagaagaagagaaaa 1054937
>gb|AC114981.2| Homo sapiens chromosome 5 clone RP11-81B23, complete sequence Length = 125914 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 392 aaaactaaaatcaaattgga 411 |||||||||||||||||||| Sbjct: 123592 aaaactaaaatcaaattgga 123573
>gb|AC106744.2| Homo sapiens chromosome 5 clone RP11-124N3, complete sequence Length = 131320 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 392 aaaactaaaatcaaattgga 411 |||||||||||||||||||| Sbjct: 19215 aaaactaaaatcaaattgga 19196
>gb|AC097653.2| Homo sapiens BAC clone RP11-148L24 from 4, complete sequence Length = 145496 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 540 agaaaccagcagctgcaaca 559 |||||||||||||||||||| Sbjct: 77720 agaaaccagcagctgcaaca 77701
>gb|U49947.1| Caenorhabditis elegans cosmid C30G4, complete sequence Length = 35950 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 376 aaagacagaagaagagaaaa 395 |||||||||||||||||||| Sbjct: 13184 aaagacagaagaagagaaaa 13165
>gb|AC046174.6| Homo sapiens chromosome 8, clone RP11-621B3, complete sequence Length = 161619 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 384 aagaagagaaaactaaaatcaaat 407 ||||||||||||||||| |||||| Sbjct: 65746 aagaagagaaaactaaactcaaat 65769
>gb|AF331643.1|AF331643 Homo sapiens chromosome 17 open reading frame 26 (C17orf26) mRNA, complete cds Length = 2737 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 121 tgatattaatcacagttatg 140 |||||||||||||||||||| Sbjct: 2693 tgatattaatcacagttatg 2674
>gb|AC160656.3| Pan troglodytes BAC clone CH251-1C6 from chromosome unknown, complete sequence Length = 194844 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 381 cagaagaagagaaaactaaaatca 404 |||||||| ||||||||||||||| Sbjct: 50183 cagaagaaaagaaaactaaaatca 50206
>ref|XM_392946.2| PREDICTED: Apis mellifera similar to ENSANGP00000019374 (LOC409433), mRNA Length = 1660 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 383 gaagaagagaaaactaaaat 402 |||||||||||||||||||| Sbjct: 1414 gaagaagagaaaactaaaat 1433
>gb|AC117578.9| Mus musculus chromosome 5, clone RP23-36I22, complete sequence Length = 213371 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 385 agaagagaaaactaaaatcaaatt 408 ||||||||||||||||| |||||| Sbjct: 47861 agaagagaaaactaaaaccaaatt 47884
>gb|AF207526.1|AF207526 Foot-and-mouth disease virus Asia 1 polyprotein gene, partial cds Length = 213 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 550 agctgcaacagcaggaggga 569 |||||||||||||||||||| Sbjct: 53 agctgcaacagcaggaggga 72
>gb|AC092650.2| Homo sapiens BAC clone RP11-429P7 from 2, complete sequence Length = 179098 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 391 gaaaactaaaatcaaattggatca 414 |||||||||||| ||||||||||| Sbjct: 33830 gaaaactaaaatgaaattggatca 33853
>gb|AF011889.1|AF011889 Human Xq28 cosmids U126G1, U142F2, U69B6, U145C10, U169A5, U84H1, U24D12, U80A7, U153E6, L35485, and R7-163A8 containing iduronate 2-sulfatase gene and pseudogene, complete sequence Length = 326663 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 385 agaagagaaaactaaaatca 404 |||||||||||||||||||| Sbjct: 50942 agaagagaaaactaaaatca 50923
>gb|AC021068.17|AC021068 Homo sapiens 3 BAC RP11-48O22 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 159259 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 378 agacagaagaagagaaaactaaaa 401 |||||||||||||||||| ||||| Sbjct: 103977 agacagaagaagagaaaaataaaa 103954
>gb|AC063926.36| Homo sapiens 12 BAC RP11-117L5 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 192774 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 cccagggaatggcagatttc 355 |||||||||||||||||||| Sbjct: 102659 cccagggaatggcagatttc 102678
>ref|NM_139177.2| Homo sapiens solute carrier family 39 (metal ion transporter), member 11 (SLC39A11), mRNA Length = 2800 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 121 tgatattaatcacagttatg 140 |||||||||||||||||||| Sbjct: 2716 tgatattaatcacagttatg 2697
>gb|AF115514.1| Homo sapiens MSTP051 (MST051) mRNA, complete cds Length = 1967 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 540 agaaaccagcagctgcaaca 559 |||||||||||||||||||| Sbjct: 261 agaaaccagcagctgcaaca 280
>gb|AF233224.1|AF233224 Homo sapiens F-box protein FBS (FBS) mRNA, complete cds Length = 1065 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 540 agaaaccagcagctgcaaca 559 |||||||||||||||||||| Sbjct: 133 agaaaccagcagctgcaaca 152
>gb|AF201932.1|AF201932 Homo sapiens DC10 (DC10) mRNA, complete cds Length = 1997 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 540 agaaaccagcagctgcaaca 559 |||||||||||||||||||| Sbjct: 287 agaaaccagcagctgcaaca 306
>emb|AL844604.4| Mouse DNA sequence from clone RP24-318C20 on chromosome 4, complete sequence Length = 173133 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 tatatgcctgggaagaaggt 117 |||||||||||||||||||| Sbjct: 132285 tatatgcctgggaagaaggt 132266
>emb|AL773520.3| Mouse DNA sequence from clone RP23-350F23 on chromosome 4, complete sequence Length = 214496 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 tatatgcctgggaagaaggt 117 |||||||||||||||||||| Sbjct: 110377 tatatgcctgggaagaaggt 110358
>dbj|AB182495.1| Plasmodium ovale gene for cysteine protease, partial cds, variant type Length = 531 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 505 taagaaagttactctatcat 524 |||||||||||||||||||| Sbjct: 225 taagaaagttactctatcat 244
>dbj|AB182494.1| Plasmodium ovale gene for cysteine protease, partial cds, classic type Length = 531 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 505 taagaaagttactctatcat 524 |||||||||||||||||||| Sbjct: 225 taagaaagttactctatcat 244
>dbj|AK026319.1| Homo sapiens cDNA: FLJ22666 fis, clone HSI08344, highly similar to AF233224 Homo sapiens F-box protein FBS (FBS) mRNA Length = 1698 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 540 agaaaccagcagctgcaaca 559 |||||||||||||||||||| Sbjct: 301 agaaaccagcagctgcaaca 320
>gb|AF174596.1|AF174596 Homo sapiens F-box protein Fbx8 (FBX8) mRNA, partial cds Length = 1026 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 540 agaaaccagcagctgcaaca 559 |||||||||||||||||||| Sbjct: 94 agaaaccagcagctgcaaca 113
>gb|AC154438.2| Mus musculus BAC clone RP23-178P20 from 16, complete sequence Length = 213575 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 387 aagagaaaactaaaatcaaa 406 |||||||||||||||||||| Sbjct: 27752 aagagaaaactaaaatcaaa 27771
>emb|AL928820.8| Zebrafish DNA sequence from clone CH211-105D11 in linkage group 19, complete sequence Length = 155348 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 520 atcatggatggaacaaccaa 539 |||||||||||||||||||| Sbjct: 114975 atcatggatggaacaaccaa 114956
>emb|CT025611.16| Mouse DNA sequence from clone RP24-100P15 on chromosome 12, complete sequence Length = 240699 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 564 gagggaagaggacccaacct 583 |||||||||||||||||||| Sbjct: 128198 gagggaagaggacccaacct 128217
>gb|AF081786.1|AF081786 Homo sapiens lysyl hydroxylase 1 gene, promoter region and partial cds Length = 9723 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 ttcaacaaagcaatatcttc 372 |||||||||||||||||||| Sbjct: 7645 ttcaacaaagcaatatcttc 7664
>emb|CT574592.2| Pan troglodytes chromosome X clone PTB-082B15 map Xq28, complete sequence Length = 228540 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 385 agaagagaaaactaaaatca 404 |||||||||||||||||||| Sbjct: 10671 agaagagaaaactaaaatca 10652
>gb|AE017220.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome Length = 4755700 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 392 aaaactaaaatcaaattggatcag 415 |||||||||||| ||||||||||| Sbjct: 4281634 aaaactaaaatcgaattggatcag 4281611
>emb|CT573418.2| Pan troglodytes chromosome X clone PTB-046H01 map Xq28, complete sequence Length = 161084 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 385 agaagagaaaactaaaatca 404 |||||||||||||||||||| Sbjct: 96216 agaagagaaaactaaaatca 96197
>emb|CT574566.2| Pan troglodytes chromosome X clone CH251-413C05 map Xq28, complete sequence Length = 161928 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 385 agaagagaaaactaaaatca 404 |||||||||||||||||||| Sbjct: 155418 agaagagaaaactaaaatca 155399
>gb|U33423.1|POU33423 Plasmodium ovale cysteine proteinase gene, partial cds Length = 951 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 505 taagaaagttactctatcat 524 |||||||||||||||||||| Sbjct: 645 taagaaagttactctatcat 664
>gb|BC014679.2| Homo sapiens F-box protein 8, mRNA (cDNA clone MGC:9368 IMAGE:3857760), complete cds Length = 1722 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 540 agaaaccagcagctgcaaca 559 |||||||||||||||||||| Sbjct: 280 agaaaccagcagctgcaaca 299
>emb|CT025592.14| Mouse DNA sequence from clone RP23-431J17 on chromosome 16, complete sequence Length = 215987 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 387 aagagaaaactaaaatcaaa 406 |||||||||||||||||||| Sbjct: 40449 aagagaaaactaaaatcaaa 40430
>emb|AL627409.9| Mouse DNA sequence from clone RP23-430L23 on chromosome X, complete sequence Length = 189295 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 123 atattaatcacagttatgtc 142 |||||||||||||||||||| Sbjct: 181061 atattaatcacagttatgtc 181042
>gb|AC167975.3| Mus musculus BAC clone RP23-171A14 from chromosome 13, complete sequence Length = 220418 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 543 aaccagcagctgcaacagcaggag 566 |||||||||| ||||||||||||| Sbjct: 113616 aaccagcagcagcaacagcaggag 113593
>gb|AC080037.11| Homo sapiens chromosome 17, clone CTD-3010D24, complete sequence Length = 248996 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 121 tgatattaatcacagttatg 140 |||||||||||||||||||| Sbjct: 61636 tgatattaatcacagttatg 61655 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,883,314 Number of Sequences: 3902068 Number of extensions: 6883314 Number of successful extensions: 149088 Number of sequences better than 10.0: 112 Number of HSP's better than 10.0 without gapping: 112 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 148682 Number of HSP's gapped (non-prelim): 400 length of query: 663 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 640 effective length of database: 17,143,297,704 effective search space: 10971710530560 effective search space used: 10971710530560 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)