| Clone Name | bags13e18 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_185281.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1044 Score = 630 bits (318), Expect = e-177 Identities = 580/669 (86%), Gaps = 1/669 (0%) Strand = Plus / Plus Query: 9 cggcggngggatgaacatgcaagnacatcttcagcagctttttcggaggaggtggtggtg 68 |||||| ||||||||||| || | ||||||| |||||||| ||||| || |||||||||| Sbjct: 315 cggcggcgggatgaacattca-ggacatctttagcagcttcttcggtggtggtggtggtg 373 Query: 69 gtatggaagaggaggaagaacagatcataaaaggtgatgatgtgattgttgaactggatg 128 | ||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||| Sbjct: 374 ggatggaagaggaggaagagcagattataaaaggtgatgatgtgatcgttgaactggatg 433 Query: 129 cttcactagaggacctgtacatgggtggttcattaaaggtttggagagnnnnnnncatca 188 ||||| | |||||| |||||||||| || ||| ||||||||||| | | | ||| Sbjct: 434 cttcattggaggacttgtacatgggcggctcactaaaggtttggcgggagaaaaacgtca 493 Query: 189 taaaaccagcaccaggaaagagacgatgcaactgcaggaatgaagtttaccaccgtcaaa 248 |||| ||||||||||||||||| |||||||| ||||| || ||||||||||| | |||| Sbjct: 494 taaagccagcaccaggaaagaggcgatgcaattgcagaaacgaagtttaccatagacaaa 553 Query: 249 ttggtcctggaatgtatcaacaaatgaccgagcaggtctgcgaccagtgtccaaatgtga 308 ||||||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||| Sbjct: 554 ttggtccaggaatgtatcaacaaatgaccgagcaggtctgtgaccagtgtgcaaatgtga 613 Query: 309 agtatgtacgagaaggtgattttttgaccgttgatattgagaagggtatgcaagatggac 368 ||||||| |||||||||||||||||||| |||||||||||||| || ||||||||||| | Sbjct: 614 agtatgtgcgagaaggtgattttttgactgttgatattgagaaaggaatgcaagatgggc 673 Query: 369 aggaggtttcatttttcgaggaaggagagcctaagattgatggagaacctggagacttga 428 |||| |||||||| || |||||||||||||||||||||||||| ||||||||||| |||| Sbjct: 674 aggaagtttcattctttgaggaaggagagcctaagattgatggtgaacctggagatttga 733 Query: 429 agttcaggattcggacagcaccacatgaccgcttcagaagagaaggcaacgatctacatg 488 |||| ||||| || |||||||||||||| || ||||||||||||||||| || || || Sbjct: 734 agtttaggatccgaacagcaccacatgagcgattcagaagagaaggcaatgacctgcaca 793 Query: 489 caacagttacaatctccctgctccaagctctggttggattcgagaagaacctcaagcatc 548 |||| ||||||||||||||||||||||||||||| || |||||||||| | | ||||||| Sbjct: 794 caactgttacaatctccctgctccaagctctggtcggcttcgagaagaccattaagcatc 853 Query: 549 ttgacaaccatttggtccaaatcggctcgcagggtgttaccaagcccaaggaggtaagga 608 | ||||| ||| |||| |||| ||| | |||| | ||||| ||||||||||| |||| Sbjct: 854 tggacaatcatatggtggaaattggcaccaaggggatcaccaaacccaaggaggttagga 913 Query: 609 aattcaaaggagagggcatgccattgcaccaaagcaacaagaaaggcgatctgtatgtga 668 | |||||||| || || ||||||||| |||| ||||||||||||||||| || ||||| | Sbjct: 914 agttcaaaggggaaggaatgccattgtaccagagcaacaagaaaggcgacctatatgtaa 973 Query: 669 cattcgagg 677 | ||||||| Sbjct: 974 ctttcgagg 982
>gb|AY111286.1| Zea mays CL10549_1 mRNA sequence Length = 1211 Score = 498 bits (251), Expect = e-137 Identities = 514/599 (85%) Strand = Plus / Minus Query: 79 ggaggaagaacagatcataaaaggtgatgatgtgattgttgaactggatgcttcactaga 138 ||||||| |||| || ||||||||||||| |||||||||||||||||||||||| |||| Sbjct: 955 ggaggaacaacaaattttaaaaggtgatgaggtgattgttgaactggatgcttcattaga 896 Query: 139 ggacctgtacatgggtggttcattaaaggtttggagagnnnnnnncatcataaaaccagc 198 |||| |||||||||| |||||||||||||||||||||| ||||| ||||||| ||||| Sbjct: 895 ggacttgtacatgggcggttcattaaaggtttggagagagnnnnntgtcataaagccagc 836 Query: 199 accaggaaagagacgatgcaactgcaggaatgaagtttaccaccgtcaaattggtcctgg 258 |||||||||||| || |||||||| ||||| ||||||||||| || ||||| |||||||| Sbjct: 835 accaggaaagaggcgctgcaactgtaggaacgaagtttaccatcgacaaataggtcctgg 776 Query: 259 aatgtatcaacaaatgaccgagcaggtctgcgaccagtgtccaaatgtgaagtatgtacg 318 |||||||||||| ||||| ||||||||||||||||| |||||||||||||| | |||||| Sbjct: 775 aatgtatcaacagatgactgagcaggtctgcgaccaatgtccaaatgtgaaatttgtacg 716 Query: 319 agaaggtgattttttgaccgttgatattgagaagggtatgcaagatggacaggaggtttc 378 |||||| || || ||||| ||||||||||||||||| ||| |||||| ||||||||||| Sbjct: 715 agaaggggaattcttgactgttgatattgagaagggaatgaaagatgcacaggaggtttt 656 Query: 379 atttttcgaggaaggagagcctaagattgatggagaacctggagacttgaagttcaggat 438 ||||||||| ||||||||||||||||| ||||| || || |||||||||||||| Sbjct: 655 gnnnnncgaggaaggcgagcctaagattgatggcgaaccaggcgatttgaagttcaggat 596 Query: 439 tcggacagcaccacatgaccgcttcagaagagaaggcaacgatctacatgcaacagttac 498 || |||||| ||| || ||||| | |||||||||| || || |||||||||||||| Sbjct: 595 ccgaacagcattacacagccacttcaaacgagaaggcaatgacctgcatgcaacagttac 536 Query: 499 aatctccctgctccaagctctggttggattcgagaagaacctcaagcatcttgacaacca 558 ||| |||||||| |||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 535 aatatccctgctgcaagctctggttggtttcgagaagacaatcaagcatcttgacaacca 476 Query: 559 tttggtccaaatcggctcgcagggtgttaccaagcccaaggaggtaaggaaattcaaagg 618 | |||| |||| ||| | |||| | ||||| || |||||| | ||||| |||||||| Sbjct: 475 tctggtagaaattggcaccaagggcatcaccaaaccgaaggagatcaggaagttcaaagg 416 Query: 619 agagggcatgccattgcaccaaagcaacaagaaaggcgatctgtatgtgacattcgagg 677 || ||||||||| | ||||||||||||||||||| || ||||||||||||||||||| Sbjct: 415 tgaaggcatgccactataccaaagcaacaagaaaggtgacctgtatgtgacattcgagg 357
>dbj|AK062718.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-106-C11, full insert sequence Length = 827 Score = 353 bits (178), Expect = 5e-94 Identities = 328/378 (86%) Strand = Plus / Plus Query: 300 caaatgtgaagtatgtacgagaaggtgattttttgaccgttgatattgagaagggtatgc 359 |||||||||||||||| |||||||||||||||||||| |||||||||||||| || |||| Sbjct: 4 caaatgtgaagtatgtgcgagaaggtgattttttgactgttgatattgagaaaggaatgc 63 Query: 360 aagatggacaggaggtttcatttttcgaggaaggagagcctaagattgatggagaacctg 419 ||||||| ||||| |||||||| || |||||||||||||||||||||||||| ||||||| Sbjct: 64 aagatgggcaggaagtttcattctttgaggaaggagagcctaagattgatggtgaacctg 123 Query: 420 gagacttgaagttcaggattcggacagcaccacatgaccgcttcagaagagaaggcaacg 479 |||| |||||||| ||||| || |||||||||||||| || ||||||||||||||||| | Sbjct: 124 gagatttgaagtttaggatccgaacagcaccacatgagcgattcagaagagaaggcaatg 183 Query: 480 atctacatgcaacagttacaatctccctgctccaagctctggttggattcgagaagaacc 539 | || || |||| ||||||||||||||||||||||||||||| || |||||||||| | Sbjct: 184 acctgcacacaactgttacaatctccctgctccaagctctggtcggcttcgagaagacca 243 Query: 540 tcaagcatcttgacaaccatttggtccaaatcggctcgcagggtgttaccaagcccaagg 599 | |||||||| ||||| ||| |||| |||| ||| | |||| | ||||| ||||||| Sbjct: 244 ttaagcatctggacaatcatatggtggaaattggcaccaaggggatcaccaaacccaagg 303 Query: 600 aggtaaggaaattcaaaggagagggcatgccattgcaccaaagcaacaagaaaggcgatc 659 |||| ||||| |||||||| || || ||||||||| |||| ||||||||||||||||| | Sbjct: 304 aggttaggaagttcaaaggggaaggaatgccattgtaccagagcaacaagaaaggcgacc 363 Query: 660 tgtatgtgacattcgagg 677 | ||||| || ||||||| Sbjct: 364 tatatgtaactttcgagg 381
>gb|AC087551.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0431G05, complete sequence Length = 145044 Score = 145 bits (73), Expect = 2e-31 Identities = 112/125 (89%) Strand = Plus / Plus Query: 44 agctttttcggaggaggtggtggtggtatggaagaggaggaagaacagatcataaaaggt 103 ||||| ||||| || ||||||||||| ||||||||||||||||| ||||| ||||||||| Sbjct: 122455 agcttcttcggtggtggtggtggtgggatggaagaggaggaagagcagattataaaaggt 122514 Query: 104 gatgatgtgattgttgaactggatgcttcactagaggacctgtacatgggtggttcatta 163 ||||||||||| |||||||||||||||||| | |||||| |||||||||| || ||| || Sbjct: 122515 gatgatgtgatcgttgaactggatgcttcattggaggacttgtacatgggcggctcacta 122574 Query: 164 aaggt 168 ||||| Sbjct: 122575 aaggt 122579 Score = 127 bits (64), Expect = 5e-26 Identities = 91/100 (91%) Strand = Plus / Plus Query: 186 tcataaaaccagcaccaggaaagagacgatgcaactgcaggaatgaagtttaccaccgtc 245 ||||||| ||||||||||||||||| |||||||| ||||| || ||||||||||| | | Sbjct: 122801 tcataaagccagcaccaggaaagaggcgatgcaattgcagaaacgaagtttaccatagac 122860 Query: 246 aaattggtcctggaatgtatcaacaaatgaccgagcaggt 285 |||||||||| ||||||||||||||||||||||||||||| Sbjct: 122861 aaattggtccaggaatgtatcaacaaatgaccgagcaggt 122900 Score = 123 bits (62), Expect = 8e-25 Identities = 83/90 (92%) Strand = Plus / Plus Query: 282 aggtctgcgaccagtgtccaaatgtgaagtatgtacgagaaggtgattttttgaccgttg 341 ||||||| ||||||||| |||||||||||||||| |||||||||||||||||||| |||| Sbjct: 123018 aggtctgtgaccagtgtgcaaatgtgaagtatgtgcgagaaggtgattttttgactgttg 123077 Query: 342 atattgagaagggtatgcaagatggacagg 371 |||||||||| || ||||||||||| |||| Sbjct: 123078 atattgagaaaggaatgcaagatgggcagg 123107 Score = 85.7 bits (43), Expect = 2e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 587 accaagcccaaggaggtaaggaaattcaaaggagagggcatgccattgcaccaaagcaac 646 ||||| ||||||||||| ||||| |||||||| || || ||||||||| |||| |||||| Sbjct: 124490 accaaacccaaggaggttaggaagttcaaaggggaaggaatgccattgtaccagagcaac 124549 Query: 647 aagaaaggcgatctgtatgtgacattcgagg 677 ||||||||||| || ||||| || ||||||| Sbjct: 124550 aagaaaggcgacctatatgtaactttcgagg 124580 Score = 85.7 bits (43), Expect = 2e-13 Identities = 58/63 (92%) Strand = Plus / Plus Query: 368 caggaggtttcatttttcgaggaaggagagcctaagattgatggagaacctggagacttg 427 ||||| |||||||| || |||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 123655 caggaagtttcattctttgaggaaggagagcctaagattgatggtgaacctggagatttg 123714 Query: 428 aag 430 ||| Sbjct: 123715 aag 123717 Score = 71.9 bits (36), Expect = 3e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 429 agttcaggattcggacagcaccacatgaccgcttcagaagagaaggcaacgatctacatg 488 |||| ||||| || |||||||||||||| || ||||||||||||||||| || || || Sbjct: 123812 agtttaggatccgaacagcaccacatgagcgattcagaagagaaggcaatgacctgcaca 123871 Query: 489 caacagttacaatctccctg 508 |||| ||||||||||||||| Sbjct: 123872 caactgttacaatctccctg 123891 Score = 50.1 bits (25), Expect = 0.010 Identities = 49/57 (85%) Strand = Plus / Plus Query: 508 gctccaagctctggttggattcgagaagaacctcaagcatcttgacaaccatttggt 564 ||||||||||||||| || |||||||||| | | |||||||| ||||| ||| |||| Sbjct: 124303 gctccaagctctggtcggcttcgagaagaccattaagcatctggacaatcatatggt 124359
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 145 bits (73), Expect = 2e-31 Identities = 112/125 (89%) Strand = Plus / Plus Query: 44 agctttttcggaggaggtggtggtggtatggaagaggaggaagaacagatcataaaaggt 103 ||||| ||||| || ||||||||||| ||||||||||||||||| ||||| ||||||||| Sbjct: 3244738 agcttcttcggtggtggtggtggtgggatggaagaggaggaagagcagattataaaaggt 3244797 Query: 104 gatgatgtgattgttgaactggatgcttcactagaggacctgtacatgggtggttcatta 163 ||||||||||| |||||||||||||||||| | |||||| |||||||||| || ||| || Sbjct: 3244798 gatgatgtgatcgttgaactggatgcttcattggaggacttgtacatgggcggctcacta 3244857 Query: 164 aaggt 168 ||||| Sbjct: 3244858 aaggt 3244862 Score = 127 bits (64), Expect = 5e-26 Identities = 91/100 (91%) Strand = Plus / Plus Query: 186 tcataaaaccagcaccaggaaagagacgatgcaactgcaggaatgaagtttaccaccgtc 245 ||||||| ||||||||||||||||| |||||||| ||||| || ||||||||||| | | Sbjct: 3245084 tcataaagccagcaccaggaaagaggcgatgcaattgcagaaacgaagtttaccatagac 3245143 Query: 246 aaattggtcctggaatgtatcaacaaatgaccgagcaggt 285 |||||||||| ||||||||||||||||||||||||||||| Sbjct: 3245144 aaattggtccaggaatgtatcaacaaatgaccgagcaggt 3245183 Score = 123 bits (62), Expect = 8e-25 Identities = 83/90 (92%) Strand = Plus / Plus Query: 282 aggtctgcgaccagtgtccaaatgtgaagtatgtacgagaaggtgattttttgaccgttg 341 ||||||| ||||||||| |||||||||||||||| |||||||||||||||||||| |||| Sbjct: 3245301 aggtctgtgaccagtgtgcaaatgtgaagtatgtgcgagaaggtgattttttgactgttg 3245360 Query: 342 atattgagaagggtatgcaagatggacagg 371 |||||||||| || ||||||||||| |||| Sbjct: 3245361 atattgagaaaggaatgcaagatgggcagg 3245390 Score = 85.7 bits (43), Expect = 2e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 587 accaagcccaaggaggtaaggaaattcaaaggagagggcatgccattgcaccaaagcaac 646 ||||| ||||||||||| ||||| |||||||| || || ||||||||| |||| |||||| Sbjct: 3246773 accaaacccaaggaggttaggaagttcaaaggggaaggaatgccattgtaccagagcaac 3246832 Query: 647 aagaaaggcgatctgtatgtgacattcgagg 677 ||||||||||| || ||||| || ||||||| Sbjct: 3246833 aagaaaggcgacctatatgtaactttcgagg 3246863 Score = 85.7 bits (43), Expect = 2e-13 Identities = 58/63 (92%) Strand = Plus / Plus Query: 368 caggaggtttcatttttcgaggaaggagagcctaagattgatggagaacctggagacttg 427 ||||| |||||||| || |||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 3245938 caggaagtttcattctttgaggaaggagagcctaagattgatggtgaacctggagatttg 3245997 Query: 428 aag 430 ||| Sbjct: 3245998 aag 3246000 Score = 71.9 bits (36), Expect = 3e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 429 agttcaggattcggacagcaccacatgaccgcttcagaagagaaggcaacgatctacatg 488 |||| ||||| || |||||||||||||| || ||||||||||||||||| || || || Sbjct: 3246095 agtttaggatccgaacagcaccacatgagcgattcagaagagaaggcaatgacctgcaca 3246154 Query: 489 caacagttacaatctccctg 508 |||| ||||||||||||||| Sbjct: 3246155 caactgttacaatctccctg 3246174 Score = 50.1 bits (25), Expect = 0.010 Identities = 49/57 (85%) Strand = Plus / Plus Query: 508 gctccaagctctggttggattcgagaagaacctcaagcatcttgacaaccatttggt 564 ||||||||||||||| || |||||||||| | | |||||||| ||||| ||| |||| Sbjct: 3246586 gctccaagctctggtcggcttcgagaagaccattaagcatctggacaatcatatggt 3246642
>gb|AC087425.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0676G05, complete sequence Length = 167317 Score = 145 bits (73), Expect = 2e-31 Identities = 112/125 (89%) Strand = Plus / Plus Query: 44 agctttttcggaggaggtggtggtggtatggaagaggaggaagaacagatcataaaaggt 103 ||||| ||||| || ||||||||||| ||||||||||||||||| ||||| ||||||||| Sbjct: 38562 agcttcttcggtggtggtggtggtgggatggaagaggaggaagagcagattataaaaggt 38621 Query: 104 gatgatgtgattgttgaactggatgcttcactagaggacctgtacatgggtggttcatta 163 ||||||||||| |||||||||||||||||| | |||||| |||||||||| || ||| || Sbjct: 38622 gatgatgtgatcgttgaactggatgcttcattggaggacttgtacatgggcggctcacta 38681 Query: 164 aaggt 168 ||||| Sbjct: 38682 aaggt 38686 Score = 127 bits (64), Expect = 5e-26 Identities = 91/100 (91%) Strand = Plus / Plus Query: 186 tcataaaaccagcaccaggaaagagacgatgcaactgcaggaatgaagtttaccaccgtc 245 ||||||| ||||||||||||||||| |||||||| ||||| || ||||||||||| | | Sbjct: 38908 tcataaagccagcaccaggaaagaggcgatgcaattgcagaaacgaagtttaccatagac 38967 Query: 246 aaattggtcctggaatgtatcaacaaatgaccgagcaggt 285 |||||||||| ||||||||||||||||||||||||||||| Sbjct: 38968 aaattggtccaggaatgtatcaacaaatgaccgagcaggt 39007 Score = 123 bits (62), Expect = 8e-25 Identities = 83/90 (92%) Strand = Plus / Plus Query: 282 aggtctgcgaccagtgtccaaatgtgaagtatgtacgagaaggtgattttttgaccgttg 341 ||||||| ||||||||| |||||||||||||||| |||||||||||||||||||| |||| Sbjct: 39125 aggtctgtgaccagtgtgcaaatgtgaagtatgtgcgagaaggtgattttttgactgttg 39184 Query: 342 atattgagaagggtatgcaagatggacagg 371 |||||||||| || ||||||||||| |||| Sbjct: 39185 atattgagaaaggaatgcaagatgggcagg 39214 Score = 85.7 bits (43), Expect = 2e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 587 accaagcccaaggaggtaaggaaattcaaaggagagggcatgccattgcaccaaagcaac 646 ||||| ||||||||||| ||||| |||||||| || || ||||||||| |||| |||||| Sbjct: 40597 accaaacccaaggaggttaggaagttcaaaggggaaggaatgccattgtaccagagcaac 40656 Query: 647 aagaaaggcgatctgtatgtgacattcgagg 677 ||||||||||| || ||||| || ||||||| Sbjct: 40657 aagaaaggcgacctatatgtaactttcgagg 40687 Score = 85.7 bits (43), Expect = 2e-13 Identities = 58/63 (92%) Strand = Plus / Plus Query: 368 caggaggtttcatttttcgaggaaggagagcctaagattgatggagaacctggagacttg 427 ||||| |||||||| || |||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 39762 caggaagtttcattctttgaggaaggagagcctaagattgatggtgaacctggagatttg 39821 Query: 428 aag 430 ||| Sbjct: 39822 aag 39824 Score = 71.9 bits (36), Expect = 3e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 429 agttcaggattcggacagcaccacatgaccgcttcagaagagaaggcaacgatctacatg 488 |||| ||||| || |||||||||||||| || ||||||||||||||||| || || || Sbjct: 39919 agtttaggatccgaacagcaccacatgagcgattcagaagagaaggcaatgacctgcaca 39978 Query: 489 caacagttacaatctccctg 508 |||| ||||||||||||||| Sbjct: 39979 caactgttacaatctccctg 39998 Score = 50.1 bits (25), Expect = 0.010 Identities = 49/57 (85%) Strand = Plus / Plus Query: 508 gctccaagctctggttggattcgagaagaacctcaagcatcttgacaaccatttggt 564 ||||||||||||||| || |||||||||| | | |||||||| ||||| ||| |||| Sbjct: 40410 gctccaagctctggtcggcttcgagaagaccattaagcatctggacaatcatatggt 40466
>gb|AC155335.1| Brassica rapa subsp. pekinensis chromosome Cytogenetic chromosome 1 clone KBrH001H24, complete sequence Length = 118144 Score = 83.8 bits (42), Expect = 7e-13 Identities = 84/98 (85%) Strand = Plus / Minus Query: 188 ataaaaccagcaccaggaaagagacgatgcaactgcaggaatgaagtttaccaccgtcaa 247 ||||||||||| || ||||||||| |||||||||||| |||| ||||| ||| | ||| Sbjct: 7943 ataaaaccagctcctggaaagagaaattgcaactgcagggatgaggtttatcacaggcaa 7884 Query: 248 attggtcctggaatgtatcaacaaatgaccgagcaggt 285 |||||||||||||||| ||||| ||||| |||||||| Sbjct: 7883 attggtcctggaatgttccaacagatgacagagcaggt 7846 Score = 56.0 bits (28), Expect = 2e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 443 acagcaccacatgaccgcttcagaagagaaggcaacgatctaca 486 ||||||||||||| ||| ||||| ||||| |||||||||||||| Sbjct: 7422 acagcaccacatgcccggttcaggagagatggcaacgatctaca 7379
>ref|NM_116125.2| Arabidopsis thaliana heat shock protein binding / unfolded protein binding AT3G62600 mRNA, complete cds Length = 1453 Score = 73.8 bits (37), Expect = 7e-10 Identities = 85/101 (84%) Strand = Plus / Plus Query: 188 ataaaaccagcaccaggaaagagacgatgcaactgcaggaatgaagtttaccaccgtcaa 247 ||||||||||| || ||||||||| || ||||||||||| || || || ||| | ||| Sbjct: 654 ataaaaccagctcctggaaagagaaagtgtaactgcaggaacgaggtctatcacagacaa 713 Query: 248 attggtcctggaatgtatcaacaaatgaccgagcaggtctg 288 |||||||||||||||| ||||| ||||| ||||||||||| Sbjct: 714 attggtcctggaatgttccaacagatgacagagcaggtctg 754 Score = 50.1 bits (25), Expect = 0.010 Identities = 37/41 (90%) Strand = Plus / Plus Query: 446 gcaccacatgaccgcttcagaagagaaggcaacgatctaca 486 |||||||||| ||| |||||||| || |||||||||||||| Sbjct: 912 gcaccacatgcccgtttcagaagggatggcaacgatctaca 952
>gb|AY125534.1| Arabidopsis thaliana At3g62600/F26K9_30 mRNA, complete cds Length = 1041 Score = 73.8 bits (37), Expect = 7e-10 Identities = 85/101 (84%) Strand = Plus / Plus Query: 188 ataaaaccagcaccaggaaagagacgatgcaactgcaggaatgaagtttaccaccgtcaa 247 ||||||||||| || ||||||||| || ||||||||||| || || || ||| | ||| Sbjct: 490 ataaaaccagctcctggaaagagaaagtgtaactgcaggaacgaggtctatcacagacaa 549 Query: 248 attggtcctggaatgtatcaacaaatgaccgagcaggtctg 288 |||||||||||||||| ||||| ||||| ||||||||||| Sbjct: 550 attggtcctggaatgttccaacagatgacagagcaggtctg 590 Score = 50.1 bits (25), Expect = 0.010 Identities = 37/41 (90%) Strand = Plus / Plus Query: 446 gcaccacatgaccgcttcagaagagaaggcaacgatctaca 486 |||||||||| ||| |||||||| || |||||||||||||| Sbjct: 748 gcaccacatgcccgtttcagaagggatggcaacgatctaca 788
>gb|AY094429.1| Arabidopsis thaliana AT3g62600/F26K9_30 mRNA, complete cds Length = 1365 Score = 73.8 bits (37), Expect = 7e-10 Identities = 85/101 (84%) Strand = Plus / Plus Query: 188 ataaaaccagcaccaggaaagagacgatgcaactgcaggaatgaagtttaccaccgtcaa 247 ||||||||||| || ||||||||| || ||||||||||| || || || ||| | ||| Sbjct: 623 ataaaaccagctcctggaaagagaaagtgtaactgcaggaacgaggtctatcacagacaa 682 Query: 248 attggtcctggaatgtatcaacaaatgaccgagcaggtctg 288 |||||||||||||||| ||||| ||||| ||||||||||| Sbjct: 683 attggtcctggaatgttccaacagatgacagagcaggtctg 723 Score = 50.1 bits (25), Expect = 0.010 Identities = 37/41 (90%) Strand = Plus / Plus Query: 446 gcaccacatgaccgcttcagaagagaaggcaacgatctaca 486 |||||||||| ||| |||||||| || |||||||||||||| Sbjct: 881 gcaccacatgcccgtttcagaagggatggcaacgatctaca 921
>gb|AY087640.1| Arabidopsis thaliana clone 37292 mRNA, complete sequence Length = 1352 Score = 73.8 bits (37), Expect = 7e-10 Identities = 85/101 (84%) Strand = Plus / Plus Query: 188 ataaaaccagcaccaggaaagagacgatgcaactgcaggaatgaagtttaccaccgtcaa 247 ||||||||||| || ||||||||| || ||||||||||| || || || ||| | ||| Sbjct: 654 ataaaaccagctcctggaaagagaaagtgtaactgcaggaacgaggtctatcacagacaa 713 Query: 248 attggtcctggaatgtatcaacaaatgaccgagcaggtctg 288 |||||||||||||||| ||||| ||||| ||||||||||| Sbjct: 714 attggtcctggaatgttccaacagatgacagagcaggtctg 754 Score = 50.1 bits (25), Expect = 0.010 Identities = 37/41 (90%) Strand = Plus / Plus Query: 446 gcaccacatgaccgcttcagaagagaaggcaacgatctaca 486 |||||||||| ||| |||||||| || |||||||||||||| Sbjct: 912 gcaccacatgcccgtttcagaagggatggcaacgatctaca 952
>emb|AL162651.1|ATF26K9 Arabidopsis thaliana DNA chromosome 3, BAC clone F26K9 Length = 110257 Score = 67.9 bits (34), Expect = 4e-08 Identities = 82/98 (83%) Strand = Plus / Minus Query: 188 ataaaaccagcaccaggaaagagacgatgcaactgcaggaatgaagtttaccaccgtcaa 247 ||||||||||| || ||||||||| || ||||||||||| || || || ||| | ||| Sbjct: 5067 ataaaaccagctcctggaaagagaaagtgtaactgcaggaacgaggtctatcacagacaa 5008 Query: 248 attggtcctggaatgtatcaacaaatgaccgagcaggt 285 |||||||||||||||| ||||| ||||| |||||||| Sbjct: 5007 attggtcctggaatgttccaacagatgacagagcaggt 4970 Score = 50.1 bits (25), Expect = 0.010 Identities = 37/41 (90%) Strand = Plus / Minus Query: 446 gcaccacatgaccgcttcagaagagaaggcaacgatctaca 486 |||||||||| ||| |||||||| || |||||||||||||| Sbjct: 4498 gcaccacatgcccgtttcagaagggatggcaacgatctaca 4458
>gb|AC145329.35| Medicago truncatula clone mth2-8i21, complete sequence Length = 123357 Score = 65.9 bits (33), Expect = 2e-07 Identities = 81/97 (83%) Strand = Plus / Minus Query: 189 taaaaccagcaccaggaaagagacgatgcaactgcaggaatgaagtttaccaccgtcaaa 248 |||| ||||| || ||||| ||||| || ||||| || ||||| ||||| ||| | |||| Sbjct: 68007 taaagccagctcctggaaaaagacgctgtaactgtagaaatgaggtttatcacaggcaaa 67948 Query: 249 ttggtcctggaatgtatcaacaaatgaccgagcaggt 285 |||| ||||| |||| |||||||||||| |||||||| Sbjct: 67947 ttgggcctggcatgtttcaacaaatgacagagcaggt 67911 Score = 40.1 bits (20), Expect = 9.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 605 aggaaattcaaaggagagggcatgccattgca 636 ||||| |||||||| ||||| ||||||||||| Sbjct: 64996 aggaagttcaaaggggagggtatgccattgca 64965
>gb|AC147802.2| Oryza sativa chromosome 3 BAC OSJNBb0013C14 genomic sequence, complete sequence Length = 132981 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 332 ttgaccgttgatattgagaagggtatgcaagatg 365 ||||| ||||||||||||||||| |||||||||| Sbjct: 111163 ttgacagttgatattgagaagggaatgcaagatg 111130
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 332 ttgaccgttgatattgagaagggtatgcaagatg 365 ||||| ||||||||||||||||| |||||||||| Sbjct: 18206178 ttgacagttgatattgagaagggaatgcaagatg 18206145 Score = 40.1 bits (20), Expect = 9.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 59 ggtggtggtggtatggaagaggaggaag 86 |||||||||||| |||||||||||||| Sbjct: 676301 ggtggtggtggtggggaagaggaggaag 676274
>gb|AC167227.1| Oryza sativa (japonica cultivar-group) chromosome unknown clone OSJNBb0026K11, complete sequence Length = 129643 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 332 ttgaccgttgatattgagaagggtatgcaagatg 365 ||||| ||||||||||||||||| |||||||||| Sbjct: 95630 ttgactgttgatattgagaagggaatgcaagatg 95597 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 332 ttgaccgttgatattgagaagggtatgcaagatg 365 ||||| ||||||||||||||||| |||||||||| Sbjct: 52213 ttgactgttgatattgagaagggaatgcaagatg 52180
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 332 ttgaccgttgatattgagaagggtatgcaagatg 365 ||||| ||||||||||||||||| |||||||||| Sbjct: 18199719 ttgacagttgatattgagaagggaatgcaagatg 18199686 Score = 40.1 bits (20), Expect = 9.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 59 ggtggtggtggtatggaagaggaggaag 86 |||||||||||| |||||||||||||| Sbjct: 676299 ggtggtggtggtggggaagaggaggaag 676272
>gb|AC160949.1| Oryza sativa (japonica cultivar-group) BAC clone OSJNBb0006E22, complete sequence Length = 128256 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 332 ttgaccgttgatattgagaagggtatgcaagatg 365 ||||| ||||||||||||||||| |||||||||| Sbjct: 111931 ttgactgttgatattgagaagggaatgcaagatg 111898
>dbj|AK101901.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033071C01, full insert sequence Length = 623 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 332 ttgaccgttgatattgagaagggtatgcaagatg 365 ||||| ||||||||||||||||| |||||||||| Sbjct: 428 ttgacagttgatattgagaagggaatgcaagatg 461
>dbj|AB072279.1| Ipomoea nil transposon Tpn109 DNA, complete sequence Length = 6834 Score = 48.1 bits (24), Expect = 0.038 Identities = 72/88 (81%) Strand = Plus / Plus Query: 189 taaaaccagcaccaggaaagagacgatgcaactgcaggaatgaagtttaccaccgtcaaa 248 |||| ||||| || || ||||| ||||| |||||| | ||||| ||||||||| | |||| Sbjct: 3189 taaagccagctcctggtaagaggcgatgtaactgccgcaatgaggtttaccacaggcaaa 3248 Query: 249 ttggtcctggaatgtatcaacaaatgac 276 ||||||| || |||| ||| || ||||| Sbjct: 3249 ttggtccagggatgtttcagcagatgac 3276
>gb|AC146947.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0057M18 map near E10005S, complete sequence Length = 140920 Score = 44.1 bits (22), Expect = 0.59 Identities = 31/34 (91%) Strand = Plus / Minus Query: 332 ttgaccgttgatattgagaagggtatgcaagatg 365 ||||| ||| ||||||||||||| |||||||||| Sbjct: 94077 ttgactgttaatattgagaagggaatgcaagatg 94044
>gb|AC138595.10| Mus musculus chromosome 1, clone RP24-286D13, complete sequence Length = 172490 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 502 ctccctgctccaagctctggtt 523 |||||||||||||||||||||| Sbjct: 82775 ctccctgctccaagctctggtt 82754
>gb|DQ440287.1| Aedes aegypti clone AET-365 molecular chaperone mRNA, complete cds Length = 1080 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 351 agggtatgcaagatggacagga 372 |||||||||||||||||||||| Sbjct: 644 agggtatgcaagatggacagga 665
>emb|AL357500.17| Human DNA sequence from clone RP11-242O24 on chromosome 1 Contains the 3' end of the EPB41 gene for erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked), three novel genes, the 3' end of the SFRS4 gene for splicing factor arginine/serine-rich 4 and a CpG island, complete sequence Length = 112392 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 53 ggaggaggtggtggtggtatgg 74 |||||||||||||||||||||| Sbjct: 32471 ggaggaggtggtggtggtatgg 32492
>emb|BX470231.8| Zebrafish DNA sequence from clone CH211-63H10 in linkage group 3, complete sequence Length = 180778 Score = 44.1 bits (22), Expect = 0.59 Identities = 25/26 (96%) Strand = Plus / Plus Query: 187 cataaaaccagcaccaggaaagagac 212 |||||||||||||||||| ||||||| Sbjct: 150008 cataaaaccagcaccaggtaagagac 150033
>gb|AF312994.1|AF312994 Mus musculus chromosome 1 clone MML, complete sequence Length = 228283 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 502 ctccctgctccaagctctggtt 523 |||||||||||||||||||||| Sbjct: 171221 ctccctgctccaagctctggtt 171200
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 44.1 bits (22), Expect = 0.59 Identities = 31/34 (91%) Strand = Plus / Minus Query: 332 ttgaccgttgatattgagaagggtatgcaagatg 365 ||||| ||| ||||||||||||| |||||||||| Sbjct: 13736268 ttgactgttaatattgagaagggaatgcaagatg 13736235
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.59 Identities = 28/30 (93%) Strand = Plus / Minus Query: 53 ggaggaggtggtggtggtatggaagaggag 82 ||||||||||||||||| ||||| |||||| Sbjct: 22369835 ggaggaggtggtggtggcatggaggaggag 22369806
>gb|AF239932.1|AF239932 Euphorbia esula DnaJ protein mRNA, complete cds Length = 1698 Score = 44.1 bits (22), Expect = 0.59 Identities = 25/26 (96%) Strand = Plus / Plus Query: 345 ttgagaagggtatgcaagatggacag 370 ||||||||||||||||| |||||||| Sbjct: 761 ttgagaagggtatgcaaaatggacag 786
>dbj|AP003630.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0566A10 Length = 174367 Score = 44.1 bits (22), Expect = 0.59 Identities = 28/30 (93%) Strand = Plus / Minus Query: 53 ggaggaggtggtggtggtatggaagaggag 82 ||||||||||||||||| ||||| |||||| Sbjct: 148258 ggaggaggtggtggtggcatggaggaggag 148229
>dbj|AP003724.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0498C03 Length = 146394 Score = 44.1 bits (22), Expect = 0.59 Identities = 28/30 (93%) Strand = Plus / Minus Query: 53 ggaggaggtggtggtggtatggaagaggag 82 ||||||||||||||||| ||||| |||||| Sbjct: 6968 ggaggaggtggtggtggcatggaggaggag 6939
>gb|AF085275.1|AF085275 Hevea brasiliensis DnaJ protein mRNA, complete cds Length = 1562 Score = 44.1 bits (22), Expect = 0.59 Identities = 25/26 (96%) Strand = Plus / Plus Query: 345 ttgagaagggtatgcaagatggacag 370 ||||||||||||||||| |||||||| Sbjct: 765 ttgagaagggtatgcaaaatggacag 790
>emb|AL833483.1|HSM804796 Homo sapiens mRNA; cDNA DKFZp686E1929 (from clone DKFZp686E1929) Length = 5229 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 53 ggaggaggtggtggtggtatgg 74 |||||||||||||||||||||| Sbjct: 440 ggaggaggtggtggtggtatgg 461
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 44.1 bits (22), Expect = 0.59 Identities = 31/34 (91%) Strand = Plus / Minus Query: 332 ttgaccgttgatattgagaagggtatgcaagatg 365 ||||| ||| ||||||||||||| |||||||||| Sbjct: 13818266 ttgactgttaatattgagaagggaatgcaagatg 13818233
>ref|XM_360313.1| Magnaporthe grisea 70-15 hypothetical protein (MG05687.4) partial mRNA Length = 3159 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 49 tttcggaggaggtggtggtgg 69 ||||||||||||||||||||| Sbjct: 1059 tttcggaggaggtggtggtgg 1039
>gb|AF026212.1| Caenorhabditis elegans cosmid F52G3, complete sequence Length = 42696 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 tggaagaggaggaagaacaga 92 ||||||||||||||||||||| Sbjct: 38751 tggaagaggaggaagaacaga 38731
>emb|AL596187.15| Mouse DNA sequence from clone RP23-287H9 on chromosome 11 Contains part of a novel gene, the 5' end of a gene that is a possible ortholog of human dynein axonemal heavy polypeptide 9 (DNAH9) and a CpG island, complete sequence Length = 202358 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/32 (93%), Gaps = 2/32 (6%) Strand = Plus / Plus Query: 53 ggaggaggtggtggtggtatggaagaggagga 84 ||||||||||||||||| ||||||||||||| Sbjct: 118112 ggaggaggtggtggtgg--tggaagaggagga 118141
>emb|AJ002892.1|ATAJ2892 Arabidopsis thaliana mRNA for glycine-rich RNA-binding protein (AtGRP2) Length = 675 Score = 42.1 bits (21), Expect = 2.3 Identities = 31/33 (93%), Gaps = 1/33 (3%) Strand = Plus / Plus Query: 52 cggaggaggtggtggtgg-tatggaagaggagg 83 |||||||||||||||||| |||||| ||||||| Sbjct: 437 cggaggaggtggtggtggctatggaggaggagg 469
>emb|AL606660.3|OSJN00111 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0085C12, complete sequence Length = 122721 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 84 aagaacagatcataaaaggtg 104 ||||||||||||||||||||| Sbjct: 35780 aagaacagatcataaaaggtg 35800
>ref|NM_078344.2| Caenorhabditis elegans F52G3.5 (F52G3.5) mRNA, complete cds Length = 1186 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 tggaagaggaggaagaacaga 92 ||||||||||||||||||||| Sbjct: 530 tggaagaggaggaagaacaga 550
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 84 aagaacagatcataaaaggtg 104 ||||||||||||||||||||| Sbjct: 31620963 aagaacagatcataaaaggtg 31620983
>emb|AL772168.5| Mouse DNA sequence from clone RP23-419B9 on chromosome 4, complete sequence Length = 128814 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 70 tatggaagaggaggaagaaca 90 ||||||||||||||||||||| Sbjct: 122491 tatggaagaggaggaagaaca 122471
>gb|AC113289.12| Mus musculus chromosome 15, clone RP23-414M11, complete sequence Length = 211054 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 ggtatggaagaggaggaaga 87 |||||||||||||||||||| Sbjct: 59987 ggtatggaagaggaggaaga 59968
>ref|NM_104013.2| Arabidopsis thaliana unknown protein AT1G51350 mRNA, complete cds Length = 2441 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 cggaggaggtggtggtggta 71 |||||||||||||||||||| Sbjct: 121 cggaggaggtggtggtggta 102
>ref|NM_001035492.1| Bos taurus similar to Stress-induced-phosphoprotein 1 (STI1) (Hsc70/Hsp90-organizing protein) (Hop) (Transformation-sensitive protein IEF SSP 3521) (MGC128110), mRNA Length = 2116 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 46 ctttttcggaggaggtggtggtgg 69 |||||| ||||||||||||||||| Sbjct: 691 ctttttgggaggaggtggtggtgg 668
>ref|XM_467125.1| Oryza sativa (japonica cultivar-group), mRNA Length = 864 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 tcggaggaggtggtggtggt 70 |||||||||||||||||||| Sbjct: 47 tcggaggaggtggtggtggt 28
>ref|XM_477619.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1943 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 cggaggaggtggtggtggta 71 |||||||||||||||||||| Sbjct: 133 cggaggaggtggtggtggta 114
>gb|AE017351.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 11, complete sequence Length = 1019846 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 529 cgagaagaacctcaagcatcttga 552 |||||||||||||||||| ||||| Sbjct: 393278 cgagaagaacctcaagcaccttga 393301
>ref|XM_958689.1| Neurospora crassa OR74A hypothetical protein (NCU02825.1) partial mRNA Length = 516 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 cggaggaggtggtggtggta 71 |||||||||||||||||||| Sbjct: 276 cggaggaggtggtggtggta 295
>gb|AY497552.1| Haemophilus influenzae nontypeable strain 5 adhesin (hmw2A) gene, partial cds Length = 4803 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 ggtgatgatgtgattgttga 120 |||||||||||||||||||| Sbjct: 1279 ggtgatgatgtgattgttga 1298
>ref|XM_330012.1| Neurospora crassa OR74A hypothetical protein (NCU02825.1) partial mRNA Length = 516 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 cggaggaggtggtggtggta 71 |||||||||||||||||||| Sbjct: 276 cggaggaggtggtggtggta 295
>ref|XM_591464.2| PREDICTED: Bos taurus similar to Stress-induced-phosphoprotein 1 (STI1) (Hsc70/Hsp90-organizing protein) (Hop) (Transformation-sensitive protein IEF SSP 3521) (LOC540098), mRNA Length = 2103 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 46 ctttttcggaggaggtggtggtgg 69 |||||| ||||||||||||||||| Sbjct: 674 ctttttgggaggaggtggtggtgg 651
>gb|BC070412.1| Mus musculus diaphanous homolog 1 (Drosophila), mRNA (cDNA clone MGC:86169 IMAGE:5705112), complete cds Length = 5783 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 ggaggaggtggtggtggtat 72 |||||||||||||||||||| Sbjct: 2321 ggaggaggtggtggtggtat 2302
>ref|NM_006204.2| Homo sapiens phosphodiesterase 6C, cGMP-specific, cone, alpha prime (PDE6C), mRNA Length = 2969 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 atcttcagcagctttttcgg 54 |||||||||||||||||||| Sbjct: 2667 atcttcagcagctttttcgg 2648
>emb|BX890590.11| Zebrafish DNA sequence from clone DKEY-15H19 in linkage group 3, complete sequence Length = 141661 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 500 atctccctgctccaagctct 519 |||||||||||||||||||| Sbjct: 117616 atctccctgctccaagctct 117597
>ref|XM_567811.1| Cryptococcus neoformans var. neoformans JEC21 purine nucleotide binding protein (CNK01320) partial mRNA Length = 3163 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 529 cgagaagaacctcaagcatcttga 552 |||||||||||||||||| ||||| Sbjct: 2266 cgagaagaacctcaagcaccttga 2289
>gb|AC124362.3| Mus musculus BAC clone RP24-528N1 from chromosome 13, complete sequence Length = 173382 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 atggaagaggaggaagaaca 90 |||||||||||||||||||| Sbjct: 24050 atggaagaggaggaagaaca 24069
>gb|AC129315.3| Mus musculus BAC clone RP23-407E2 from chromosome 18, complete sequence Length = 183462 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 ggaggaggtggtggtggtat 72 |||||||||||||||||||| Sbjct: 91032 ggaggaggtggtggtggtat 91051
>ref|XM_545858.2| PREDICTED: Canis familiaris hypothetical LOC488740, transcript variant 1 (LOC488740), mRNA Length = 1995 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 tggaagaggaggaagaacag 91 |||||||||||||||||||| Sbjct: 341 tggaagaggaggaagaacag 360
>gb|AC164433.4| Mus musculus BAC clone RP23-357G5 from chromosome 14, complete sequence Length = 190748 Score = 40.1 bits (20), Expect = 9.3 Identities = 33/36 (91%), Gaps = 1/36 (2%) Strand = Plus / Plus Query: 53 ggaggaggtggtggtggt-atggaagaggaggaaga 87 |||||||||||||||||| |||| ||||||||||| Sbjct: 64467 ggaggaggtggtggtggtggtggaggaggaggaaga 64502
>emb|CR936845.11| Mouse DNA sequence from clone DN-279H6 on chromosome 11, complete sequence Length = 101662 Score = 40.1 bits (20), Expect = 9.3 Identities = 32/36 (88%) Strand = Plus / Minus Query: 53 ggaggaggtggtggtggtatggaagaggaggaagaa 88 |||||||||||||| || | | |||||||||||||| Sbjct: 68529 ggaggaggtggtggagggaggaaagaggaggaagaa 68494
>ref|NM_001007522.1| Xenopus tropicalis fmnl1 protein (fmnl1), mRNA Length = 4451 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 gaggaggtggtggtggtatg 73 |||||||||||||||||||| Sbjct: 2264 gaggaggtggtggtggtatg 2245
>gb|AY345232.1| Oryza sativa transcription factor Rap212 mRNA, complete cds Length = 1109 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 tcggaggaggtggtggtggt 70 |||||||||||||||||||| Sbjct: 133 tcggaggaggtggtggtggt 114
>ref|NM_007858.1| Mus musculus diaphanous homolog 1 (Drosophila) (Diap1), mRNA Length = 4378 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 ggaggaggtggtggtggtat 72 |||||||||||||||||||| Sbjct: 2159 ggaggaggtggtggtggtat 2140
>gb|BC082512.1| Xenopus tropicalis fmnl1 protein, mRNA (cDNA clone MGC:89233 IMAGE:7017921), complete cds Length = 4451 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 gaggaggtggtggtggtatg 73 |||||||||||||||||||| Sbjct: 2264 gaggaggtggtggtggtatg 2245
>ref|XM_781151.1| PREDICTED: Strongylocentrotus purpuratus similar to myelin basic protein expression factor 2, repressor (LOC581135), mRNA Length = 2877 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 51 tcggaggaggtggtggtggtatgg 74 ||||||||||||||||||| |||| Sbjct: 2057 tcggaggaggtggtggtggcatgg 2080
>emb|AL118513.17|HSDJ685L9 Human DNA sequence from clone RP4-685L9 on chromosome 20 Contains the gene for a novel protein (FLJ90166), the 5' end of a nove genel (LOC149773) and two CpG islands, complete sequence Length = 92835 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 413 gaacctggagacttgaagttcagg 436 |||||||||||| ||||||||||| Sbjct: 63909 gaacctggagacatgaagttcagg 63932
>gb|BT008416.1| Arabidopsis thaliana At1g51350 gene, complete cds Length = 2001 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 cggaggaggtggtggtggta 71 |||||||||||||||||||| Sbjct: 25 cggaggaggtggtggtggta 6
>gb|AC108451.9| Homo sapiens chromosome 15, clone RP11-379K22, complete sequence Length = 198707 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 tggaagaggaggaagaacag 91 |||||||||||||||||||| Sbjct: 35594 tggaagaggaggaagaacag 35613
>gb|AC159822.2| Mus musculus BAC clone RP23-152C21 from chromosome 12, complete sequence Length = 198679 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 aggtggtggtggtatggaag 77 |||||||||||||||||||| Sbjct: 81134 aggtggtggtggtatggaag 81153
>emb|BX649488.9| Zebrafish DNA sequence from clone DKEY-21O6 in linkage group 22, complete sequence Length = 183230 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 acatcttcagcagctttttc 52 |||||||||||||||||||| Sbjct: 159044 acatcttcagcagctttttc 159063
>dbj|AK220466.1| Mus musculus mRNA for mKIAA4062 protein Length = 5596 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 ggaggaggtggtggtggtat 72 |||||||||||||||||||| Sbjct: 2156 ggaggaggtggtggtggtat 2137
>gb|BC103003.1| Bos taurus similar to Stress-induced-phosphoprotein 1 (STI1) (Hsc70/Hsp90-organizing protein) (Hop) (Transformation-sensitive protein IEF SSP 3521), mRNA (cDNA clone MGC:128110 IMAGE:7987890), complete cds Length = 2116 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 46 ctttttcggaggaggtggtggtgg 69 |||||| ||||||||||||||||| Sbjct: 691 ctttttgggaggaggtggtggtgg 668
>dbj|AK123030.1| Homo sapiens cDNA FLJ41034 fis, clone HLUNG2000970, highly similar to FMLP-RELATED RECEPTOR II Length = 2472 Score = 40.1 bits (20), Expect = 9.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 59 ggtggtggtggtatggaagaggaggaagaaca 90 ||||||||||||||| ||||||| ||| |||| Sbjct: 1301 ggtggtggtggtatgaaagaggaagaaaaaca 1270
>emb|CR618932.1| full-length cDNA clone CS0DI036YD09 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 2222 Score = 40.1 bits (20), Expect = 9.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 59 ggtggtggtggtatggaagaggaggaagaaca 90 ||||||||||||||| ||||||| ||| |||| Sbjct: 1324 ggtggtggtggtatgaaagaggaagaaaaaca 1293
>gb|AY093140.1| Arabidopsis thaliana unknown protein (At1g51350) mRNA, complete cds Length = 2441 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 cggaggaggtggtggtggta 71 |||||||||||||||||||| Sbjct: 121 cggaggaggtggtggtggta 102
>ref|XM_683625.1| PREDICTED: Danio rerio similar to SUMO-1 specific protease 2 (LOC560231), mRNA Length = 888 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 acatcttcagcagctttttc 52 |||||||||||||||||||| Sbjct: 236 acatcttcagcagctttttc 255
>ref|XM_937071.1| PREDICTED: Homo sapiens similar to Cone cGMP-specific 3,5-cyclic phosphodiesterase alpha-subunit (LOC653946), mRNA Length = 531 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 atcttcagcagctttttcgg 54 |||||||||||||||||||| Sbjct: 483 atcttcagcagctttttcgg 464
>ref|XM_693467.1| PREDICTED: Danio rerio similar to SUMO1/sentrin specific protease 7 isoform 1 (LOC570037), mRNA Length = 1080 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 acatcttcagcagctttttc 52 |||||||||||||||||||| Sbjct: 440 acatcttcagcagctttttc 459
>dbj|AK156391.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830019M02 product:diaphanous homolog 1 (Drosophila), full insert sequence Length = 3845 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 ggaggaggtggtggtggtat 72 |||||||||||||||||||| Sbjct: 407 ggaggaggtggtggtggtat 388
>ref|NM_002030.3| Homo sapiens formyl peptide receptor-like 2 (FPRL2), mRNA Length = 2517 Score = 40.1 bits (20), Expect = 9.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 59 ggtggtggtggtatggaagaggaggaagaaca 90 ||||||||||||||| ||||||| ||| |||| Sbjct: 1346 ggtggtggtggtatgaaagaggaagaaaaaca 1315
>gb|BC021396.1| Mus musculus diaphanous homolog 1 (Drosophila), mRNA (cDNA clone IMAGE:5067691), containing frame-shift errors Length = 2417 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 ggaggaggtggtggtggtat 72 |||||||||||||||||||| Sbjct: 2186 ggaggaggtggtggtggtat 2167
>gb|AC016705.4|AC016705 Homo sapiens BAC clone RP11-210M15 from 15, complete sequence Length = 177964 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 tggaagaggaggaagaacag 91 |||||||||||||||||||| Sbjct: 159718 tggaagaggaggaagaacag 159737
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 cggaggaggtggtggtggta 71 |||||||||||||||||||| Sbjct: 11925548 cggaggaggtggtggtggta 11925567
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 tcggaggaggtggtggtggt 70 |||||||||||||||||||| Sbjct: 26543202 tcggaggaggtggtggtggt 26543183
>gb|AC138023.2| Homo sapiens chromosome 3 clone RP11-7G8, complete sequence Length = 153994 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 633 tgcaccaaagcaacaagaaa 652 |||||||||||||||||||| Sbjct: 74231 tgcaccaaagcaacaagaaa 74250
>gb|AC121490.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0005F16, complete sequence Length = 160053 Score = 40.1 bits (20), Expect = 9.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 59 ggtggtggtggtatggaagaggaggaag 86 |||||||||||| |||||||||||||| Sbjct: 62182 ggtggtggtggtggggaagaggaggaag 62155
>gb|AC026205.6|AC026205 Homo sapiens chromosome 3 clone RP11-61I9 map 3p, complete sequence Length = 176669 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 338 gttgatattgagaagggtat 357 |||||||||||||||||||| Sbjct: 15245 gttgatattgagaagggtat 15226
>gb|AC020969.2|AC020969 Mus musculus chromosome 18 clone RP23-19K11, complete sequence Length = 179771 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 ggaggaggtggtggtggtat 72 |||||||||||||||||||| Sbjct: 58758 ggaggaggtggtggtggtat 58739
>dbj|AP005006.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0519E06 Length = 170634 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 tcggaggaggtggtggtggt 70 |||||||||||||||||||| Sbjct: 85583 tcggaggaggtggtggtggt 85564
>dbj|AP006529.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1114D08 Length = 148354 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 cggaggaggtggtggtggta 71 |||||||||||||||||||| Sbjct: 56589 cggaggaggtggtggtggta 56608
>gb|AC002526.1|AC002526 Human PAC clone RP4-558L21 from Xq23, complete sequence Length = 134580 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 633 tgcaccaaagcaacaagaaa 652 |||||||||||||||||||| Sbjct: 5247 tgcaccaaagcaacaagaaa 5266
>dbj|AK073463.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033041I11, full insert sequence Length = 1942 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 cggaggaggtggtggtggta 71 |||||||||||||||||||| Sbjct: 133 cggaggaggtggtggtggta 114
>emb|CR361552.19| Zebrafish DNA sequence from clone CH211-239J15 in linkage group 22, complete sequence Length = 166346 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 acatcttcagcagctttttc 52 |||||||||||||||||||| Sbjct: 102799 acatcttcagcagctttttc 102780
>gb|AC006272.1|AC006272 Homo sapiens chromosome 19, cosmid F23276, complete sequence Length = 41821 Score = 40.1 bits (20), Expect = 9.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 59 ggtggtggtggtatggaagaggaggaagaaca 90 ||||||||||||||| ||||||| ||| |||| Sbjct: 6257 ggtggtggtggtatgaaagaggaagaaaaaca 6226
>gb|AC005946.1|AC005946 Homo sapiens chromosome 19, cosmid R28782, complete sequence Length = 37392 Score = 40.1 bits (20), Expect = 9.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 59 ggtggtggtggtatggaagaggaggaagaaca 90 ||||||||||||||| ||||||| ||| |||| Sbjct: 34155 ggtggtggtggtatgaaagaggaagaaaaaca 34124
>gb|U96963.1|MMU96963 Mus musculus p140mDia mRNA, complete cds Length = 4378 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 ggaggaggtggtggtggtat 72 |||||||||||||||||||| Sbjct: 2159 ggaggaggtggtggtggtat 2140
>gb|AC154015.3| Mus musculus 6 BAC RP24-194J12 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 151119 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 625 catgccattgcaccaaagcaacaa 648 ||||| |||||||||||||||||| Sbjct: 47375 catgcaattgcaccaaagcaacaa 47352
>emb|AJ307662.1|OSA307662 Oryza sativa genomic DNA fragment, chromosome 2 Length = 339972 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 tcggaggaggtggtggtggt 70 |||||||||||||||||||| Sbjct: 248795 tcggaggaggtggtggtggt 248776
>gb|AC140345.3| Mus musculus BAC clone RP24-66E22 from 13, complete sequence Length = 238541 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 atggaagaggaggaagaaca 90 |||||||||||||||||||| Sbjct: 32609 atggaagaggaggaagaaca 32590
>gb|AC122860.5| Mus musculus BAC clone RP23-135A22 from 12, complete sequence Length = 233864 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 505 cctgctccaagctctggttg 524 |||||||||||||||||||| Sbjct: 132107 cctgctccaagctctggttg 132126
>emb|AL929232.3| Mouse DNA sequence from clone RP23-294G12 on chromosome 2, complete sequence Length = 76864 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 cggaggaggtggtggtggta 71 |||||||||||||||||||| Sbjct: 13060 cggaggaggtggtggtggta 13041
>gb|U31973.1|HSU31973 Human phosphodiesterase A' subunit (PDE6C) mRNA, complete cds Length = 2969 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 atcttcagcagctttttcgg 54 |||||||||||||||||||| Sbjct: 2667 atcttcagcagctttttcgg 2648
>emb|X94354.1|HSCGMPPDE H.sapiens DNA for Cone cGMP-PDE gene Length = 13975 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 atcttcagcagctttttcgg 54 |||||||||||||||||||| Sbjct: 13650 atcttcagcagctttttcgg 13631
>gb|AC026167.5| Homo sapiens chromosome 3 clone RP11-140B10 map 3p, complete sequence Length = 188867 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 338 gttgatattgagaagggtat 357 |||||||||||||||||||| Sbjct: 128447 gttgatattgagaagggtat 128466
>gb|AC006085.1| Arabidopsis thaliana chromosome I BAC F11M15 genomic sequence, complete sequence Length = 105807 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 cggaggaggtggtggtggta 71 |||||||||||||||||||| Sbjct: 88466 cggaggaggtggtggtggta 88447 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,794,816 Number of Sequences: 3902068 Number of extensions: 6794816 Number of successful extensions: 179659 Number of sequences better than 10.0: 106 Number of HSP's better than 10.0 without gapping: 105 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 178675 Number of HSP's gapped (non-prelim): 982 length of query: 677 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 654 effective length of database: 17,143,297,704 effective search space: 11211716698416 effective search space used: 11211716698416 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)