ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags13e13
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK102430.1| Oryza sativa (japonica cultivar-group) cDNA clon... 281 1e-72
2dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 228 1e-56
3dbj|AP004989.3| Oryza sativa (japonica cultivar-group) genomic D... 228 1e-56
4dbj|AP003728.3| Oryza sativa (japonica cultivar-group) genomic D... 228 1e-56
5ref|NM_118582.2| Arabidopsis thaliana protein prenyltransferase ... 48 0.028
6gb|AY117358.1| Arabidopsis thaliana putative rab geranylgeranyl ... 48 0.028
7gb|AY072209.1| Arabidopsis thaliana putative Rab geranylgeranyl ... 48 0.028
8emb|BX827902.1|CNS0A2G2 Arabidopsis thaliana Full-length cDNA Co... 48 0.028
9emb|AL953886.9| Zebrafish DNA sequence from clone CH211-241A17 i... 46 0.11
10emb|AL591389.5| Zebrafish DNA sequence from clone BUSM1-202L16 i... 46 0.11
11gb|AC138766.20| Mus musculus chromosome 5, clone RP23-444J3, com... 44 0.43
12gb|AC117678.16| Mus musculus chromosome 6, clone RP23-421M9, com... 42 1.7
13emb|AL935308.10| Zebrafish DNA sequence from clone CH211-227H7 i... 42 1.7
14emb|AL591604.6| Human DNA sequence from clone RP11-356F4 on chro... 42 1.7
15gb|AF336378.1| Mus musculus Kel blood group protein (Kel), epith... 42 1.7
16gb|AC156400.9| Mus musculus 6 BAC RP24-299B14 (Roswell Park Canc... 42 1.7
17emb|AL663072.12| Mouse DNA sequence from clone RP23-22J3 on chro... 42 1.7
18ref|NM_123473.2| Arabidopsis thaliana glycerophosphodiester phos... 40 6.8
19ref|NM_203136.1| Arabidopsis thaliana glycerophosphodiester phos... 40 6.8
20gb|AC131780.5| Mus musculus BAC clone RP24-340I7 from chromosome... 40 6.8
21gb|CP000057.1| Haemophilus influenzae strain 86-028NP, complete ... 40 6.8
22gb|AE016827.1| Mannheimia succiniciproducens MBEL55E, complete g... 40 6.8
23gb|AC091627.2| Solanum demissum chromosome 11 BAC PGEC513 genomi... 40 6.8
24gb|AC009403.5| Homo sapiens PAC clone RP5-1015O24 from 7, comple... 40 6.8
25gb|AC116119.12| Mus musculus chromosome 12, clone RP23-76D19, co... 40 6.8
26ref|XM_851947.1| PREDICTED: Canis familiaris similar to fuse-bin... 40 6.8
27ref|XM_851906.1| PREDICTED: Canis familiaris similar to fuse-bin... 40 6.8
28ref|XM_851865.1| PREDICTED: Canis familiaris similar to fuse-bin... 40 6.8
29ref|XM_851826.1| PREDICTED: Canis familiaris similar to fuse-bin... 40 6.8
30ref|XM_843617.1| PREDICTED: Canis familiaris similar to fuse-bin... 40 6.8
31gb|AC137702.18| Medicago truncatula clone mth2-7k10, complete se... 40 6.8
32gb|AC140722.11| Medicago truncatula clone mth2-14e20, complete s... 40 6.8
33gb|AC110418.7| Homo sapiens 3 BAC RP11-711F20 (Roswell Park Canc... 40 6.8
34gb|AC004106.1| Homo sapiens Xp22 BAC GSHB-45N23 (Genome Systems ... 40 6.8
35emb|BX855610.5| Zebrafish DNA sequence from clone DKEY-121J17 in... 40 6.8
36gb|AC146331.35| Medicago truncatula clone mth2-7h18, complete se... 40 6.8
37ref|NM_001030225.1| Danio rerio si:dkey-121j17.2 (si:dkey-121j17... 40 6.8
38gb|AC092719.3| Homo sapiens chromosome 16 clone RP11-338J22, com... 40 6.8
39gb|AC104835.3| Homo sapiens chromosome 3 clone RP11-27J5, comple... 40 6.8
40emb|BX832115.1|CNS09ZUX Arabidopsis thaliana Full-length cDNA Co... 40 6.8
41emb|BX831058.1|CNS09ZES Arabidopsis thaliana Full-length cDNA Co... 40 6.8
42emb|BX831967.1|CNS09ZLV Arabidopsis thaliana Full-length cDNA Co... 40 6.8
43gb|AC019129.8| Homo sapiens BAC clone RP11-559M23 from 2, comple... 40 6.8
44gb|AC155819.2| Mus musculus BAC clone RP23-402F16 from chromosom... 40 6.8
45emb|BX470088.11| Zebrafish DNA sequence from clone DKEY-171E12 i... 40 6.8
46gb|AC157893.2| Medicago truncatula chromosome 7 BAC clone mth2-7... 40 6.8
47dbj|AK117378.1| Arabidopsis thaliana At5g41080 mRNA for unknown ... 40 6.8
48dbj|AB010072.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 6.8
49emb|AJ278581.1|HSA278581 Homo sapiens DREV gene and IGSF6 gene f... 40 6.8
50gb|AC155808.2| Mus musculus BAC clone RP24-267H3 from 12, comple... 40 6.8
51gb|AC156563.1| Mus musculus BAC clone RP24-255E14 from 12, compl... 40 6.8
52gb|AC159234.2| Mus musculus BAC clone RP24-432D6 from chromosome... 40 6.8
53gb|AC154313.2| Mus musculus BAC clone RP23-354M21 from chromosom... 40 6.8
54gb|AC140318.4| Mus musculus BAC clone RP23-400F19 from 9, comple... 40 6.8
55emb|AL928896.6| Mouse DNA sequence from clone RP23-42H18 on chro... 40 6.8 
>dbj|AK102430.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033093H13, full
           insert sequence
          Length = 2402

 Score =  281 bits (142), Expect = 1e-72
 Identities = 238/270 (88%)
 Strand = Plus / Plus

                                                                       
Query: 11  ataagatcggtgaaaatttcagtaattactcagcatggcataatcgtagtatacttctgt 70
           |||||||  |||| || ||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 603 ataagataagtgacaacttcagtaattactcagcatggcataatcgcagtatacttctgt 662

                                                                       
Query: 71  ccaatctgctaatccaaagaagggaaggttttgagtcaaagcagaagatcttttcagagg 130
           |||||||||||||| ||   ||  | ||||| ||||||||||||||||||||||||||||
Sbjct: 663 ccaatctgctaatcaaacagagcaagggtttcgagtcaaagcagaagatcttttcagagg 722

                                                                       
Query: 131 agtttgaacttgtgattcaggcactttttacagaccctagtgaccaaagcggttggttct 190
           ||||||||||||| | |||||| |||||||||||||| ||||| ||||| || |||||||
Sbjct: 723 agtttgaacttgtaactcaggccctttttacagacccaagtgatcaaagtggatggttct 782

                                                                       
Query: 191 atcacctctggcttttagctcagacatctacccctgataacccacagctgatttcatctt 250
           ||||||| ||||||||||||||||||||||  || || || |||||||||||| | || |
Sbjct: 783 atcacctttggcttttagctcagacatctagtccagagaatccacagctgattgcttcgt 842

                                         
Query: 251 ggccttctcatggtgcaaagctcagtttat 280
           |||||||| ||||| |||| ||||||||||
Sbjct: 843 ggccttctaatggttcaaacctcagtttat 872



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 69/80 (86%)
 Strand = Plus / Plus

                                                                       
Query: 324 gagctccatttgttgttactctttgaaggaagggattatacccattgngctttatttcaa 383
           |||||||||||||||||||||  |||||||||||||| |||| ||||  |||||||| ||
Sbjct: 880 gagctccatttgttgttactcactgaaggaagggattctaccaattgttctttattttaa 939

                               
Query: 384 tgatcccgtcaaaggattaa 403
           ||| || || ||||| ||||
Sbjct: 940 tgagcctgtgaaagggttaa 959
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  228 bits (115), Expect = 1e-56
 Identities = 196/223 (87%)
 Strand = Plus / Plus

                                                                            
Query: 58       agtatacttctgtccaatctgctaatccaaagaagggaaggttttgagtcaaagcagaag 117
                ||||||||||||||||||||||||||| ||   ||  | ||||| |||||||||||||||
Sbjct: 27762095 agtatacttctgtccaatctgctaatcaaacagagcaagggtttcgagtcaaagcagaag 27762154

                                                                            
Query: 118      atcttttcagaggagtttgaacttgtgattcaggcactttttacagaccctagtgaccaa 177
                |||||||||||||||||||||||||| | |||||| |||||||||||||| ||||| |||
Sbjct: 27762155 atcttttcagaggagtttgaacttgtaactcaggccctttttacagacccaagtgatcaa 27762214

                                                                            
Query: 178      agcggttggttctatcacctctggcttttagctcagacatctacccctgataacccacag 237
                || || |||||||||||||| ||||||||||||||||||||||  || || || ||||||
Sbjct: 27762215 agtggatggttctatcacctttggcttttagctcagacatctagtccagagaatccacag 27762274

                                                           
Query: 238      ctgatttcatcttggccttctcatggtgcaaagctcagtttat 280
                |||||| | || ||||||||| ||||| |||| ||||||||||
Sbjct: 27762275 ctgattgcttcgtggccttctaatggttcaaacctcagtttat 27762317



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 69/80 (86%)
 Strand = Plus / Plus

                                                                            
Query: 324      gagctccatttgttgttactctttgaaggaagggattatacccattgngctttatttcaa 383
                |||||||||||||||||||||  |||||||||||||| |||| ||||  |||||||| ||
Sbjct: 27762325 gagctccatttgttgttactcactgaaggaagggattctaccaattgttctttattttaa 27762384

                                    
Query: 384      tgatcccgtcaaaggattaa 403
                ||| || || ||||| ||||
Sbjct: 27762385 tgagcctgtgaaagggttaa 27762404



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 42/46 (91%)
 Strand = Plus / Plus

                                                              
Query: 11       ataagatcggtgaaaatttcagtaattactcagcatggcataatcg 56
                |||||||  |||| || |||||||||||||||||||||||||||||
Sbjct: 27761581 ataagataagtgacaacttcagtaattactcagcatggcataatcg 27761626
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>dbj|AP004989.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:B1153E06
          Length = 174588

 Score =  228 bits (115), Expect = 1e-56
 Identities = 196/223 (87%)
 Strand = Plus / Plus

                                                                          
Query: 58     agtatacttctgtccaatctgctaatccaaagaagggaaggttttgagtcaaagcagaag 117
              ||||||||||||||||||||||||||| ||   ||  | ||||| |||||||||||||||
Sbjct: 111350 agtatacttctgtccaatctgctaatcaaacagagcaagggtttcgagtcaaagcagaag 111409

                                                                          
Query: 118    atcttttcagaggagtttgaacttgtgattcaggcactttttacagaccctagtgaccaa 177
              |||||||||||||||||||||||||| | |||||| |||||||||||||| ||||| |||
Sbjct: 111410 atcttttcagaggagtttgaacttgtaactcaggccctttttacagacccaagtgatcaa 111469

                                                                          
Query: 178    agcggttggttctatcacctctggcttttagctcagacatctacccctgataacccacag 237
              || || |||||||||||||| ||||||||||||||||||||||  || || || ||||||
Sbjct: 111470 agtggatggttctatcacctttggcttttagctcagacatctagtccagagaatccacag 111529

                                                         
Query: 238    ctgatttcatcttggccttctcatggtgcaaagctcagtttat 280
              |||||| | || ||||||||| ||||| |||| ||||||||||
Sbjct: 111530 ctgattgcttcgtggccttctaatggttcaaacctcagtttat 111572



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 69/80 (86%)
 Strand = Plus / Plus

                                                                          
Query: 324    gagctccatttgttgttactctttgaaggaagggattatacccattgngctttatttcaa 383
              |||||||||||||||||||||  |||||||||||||| |||| ||||  |||||||| ||
Sbjct: 111580 gagctccatttgttgttactcactgaaggaagggattctaccaattgttctttattttaa 111639

                                  
Query: 384    tgatcccgtcaaaggattaa 403
              ||| || || ||||| ||||
Sbjct: 111640 tgagcctgtgaaagggttaa 111659



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 42/46 (91%)
 Strand = Plus / Plus

                                                            
Query: 11     ataagatcggtgaaaatttcagtaattactcagcatggcataatcg 56
              |||||||  |||| || |||||||||||||||||||||||||||||
Sbjct: 110836 ataagataagtgacaacttcagtaattactcagcatggcataatcg 110881
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>dbj|AP003728.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0710B08
          Length = 186991

 Score =  228 bits (115), Expect = 1e-56
 Identities = 196/223 (87%)
 Strand = Plus / Plus

                                                                         
Query: 58    agtatacttctgtccaatctgctaatccaaagaagggaaggttttgagtcaaagcagaag 117
             ||||||||||||||||||||||||||| ||   ||  | ||||| |||||||||||||||
Sbjct: 64604 agtatacttctgtccaatctgctaatcaaacagagcaagggtttcgagtcaaagcagaag 64663

                                                                         
Query: 118   atcttttcagaggagtttgaacttgtgattcaggcactttttacagaccctagtgaccaa 177
             |||||||||||||||||||||||||| | |||||| |||||||||||||| ||||| |||
Sbjct: 64664 atcttttcagaggagtttgaacttgtaactcaggccctttttacagacccaagtgatcaa 64723

                                                                         
Query: 178   agcggttggttctatcacctctggcttttagctcagacatctacccctgataacccacag 237
             || || |||||||||||||| ||||||||||||||||||||||  || || || ||||||
Sbjct: 64724 agtggatggttctatcacctttggcttttagctcagacatctagtccagagaatccacag 64783

                                                        
Query: 238   ctgatttcatcttggccttctcatggtgcaaagctcagtttat 280
             |||||| | || ||||||||| ||||| |||| ||||||||||
Sbjct: 64784 ctgattgcttcgtggccttctaatggttcaaacctcagtttat 64826



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 69/80 (86%)
 Strand = Plus / Plus

                                                                         
Query: 324   gagctccatttgttgttactctttgaaggaagggattatacccattgngctttatttcaa 383
             |||||||||||||||||||||  |||||||||||||| |||| ||||  |||||||| ||
Sbjct: 64834 gagctccatttgttgttactcactgaaggaagggattctaccaattgttctttattttaa 64893

                                 
Query: 384   tgatcccgtcaaaggattaa 403
             ||| || || ||||| ||||
Sbjct: 64894 tgagcctgtgaaagggttaa 64913



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 42/46 (91%)
 Strand = Plus / Plus

                                                           
Query: 11    ataagatcggtgaaaatttcagtaattactcagcatggcataatcg 56
             |||||||  |||| || |||||||||||||||||||||||||||||
Sbjct: 64090 ataagataagtgacaacttcagtaattactcagcatggcataatcg 64135
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>ref|NM_118582.2| Arabidopsis thaliana protein prenyltransferase AT4G24490 mRNA,
           complete cds
          Length = 2425

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                       
Query: 25  aatttcagtaattactcagcatggcataatcgtagtatacttct 68
           |||||||| || || || |||||||||||||||||| |||||||
Sbjct: 628 aatttcagcaactattctgcatggcataatcgtagtgtacttct 671
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>gb|AY117358.1| Arabidopsis thaliana putative rab geranylgeranyl transferase
           (At4g24490) mRNA, complete cds
          Length = 2068

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                       
Query: 25  aatttcagtaattactcagcatggcataatcgtagtatacttct 68
           |||||||| || || || |||||||||||||||||| |||||||
Sbjct: 511 aatttcagcaactattctgcatggcataatcgtagtgtacttct 554
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>gb|AY072209.1| Arabidopsis thaliana putative Rab geranylgeranyl transferase
           (At4g24490) mRNA, complete cds
          Length = 2296

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                       
Query: 25  aatttcagtaattactcagcatggcataatcgtagtatacttct 68
           |||||||| || || || |||||||||||||||||| |||||||
Sbjct: 628 aatttcagcaactattctgcatggcataatcgtagtgtacttct 671
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>emb|BX827902.1|CNS0A2G2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH33ZB09 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 2216

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                       
Query: 25  aatttcagtaattactcagcatggcataatcgtagtatacttct 68
           |||||||| || || || |||||||||||||||||| |||||||
Sbjct: 609 aatttcagcaactattctgcatggcataatcgtagtgtacttct 652
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>emb|AL953886.9| Zebrafish DNA sequence from clone CH211-241A17 in linkage group 6,
            complete sequence
          Length = 154152

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 124  tcagaggagtttgaacttgtgat 146
            |||||||||||||||||||||||
Sbjct: 2881 tcagaggagtttgaacttgtgat 2859
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>emb|AL591389.5| Zebrafish DNA sequence from clone BUSM1-202L16 in linkage group 6,
            complete sequence
          Length = 93098

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 124  tcagaggagtttgaacttgtgat 146
            |||||||||||||||||||||||
Sbjct: 6256 tcagaggagtttgaacttgtgat 6234
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>gb|AC138766.20| Mus musculus chromosome 5, clone RP23-444J3, complete sequence
          Length = 206494

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 229    aacccacagctgatttcatctt 250
              ||||||||||||||||||||||
Sbjct: 130405 aacccacagctgatttcatctt 130384
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>gb|AC117678.16| Mus musculus chromosome 6, clone RP23-421M9, complete sequence
          Length = 204437

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 408    atcaaatgtaaagcctaaatt 428
              |||||||||||||||||||||
Sbjct: 186368 atcaaatgtaaagcctaaatt 186388
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>emb|AL935308.10| Zebrafish DNA sequence from clone CH211-227H7 in linkage group 20,
             complete sequence
          Length = 175626

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 23    aaaatttcagtaattactcag 43
             |||||||||||||||||||||
Sbjct: 87961 aaaatttcagtaattactcag 87981
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>emb|AL591604.6| Human DNA sequence from clone RP11-356F4 on chromosome 1 Contains the 5'
              end of the SLICK gene for a sodium- and chloride-activated
              ATP-sensitive potassium channel, complete sequence
          Length = 185560

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 328    tccatttgttgttactctttgaagg 352
              |||||||||||||| ||||||||||
Sbjct: 168197 tccatttgttgttaatctttgaagg 168173
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>gb|AF336378.1| Mus musculus Kel blood group protein (Kel), epithelial calcium channel
             1 (Ecac1), epithelial calcium channel 2 (Ecac2), and
             ephrin type A receptor (Mep) genes, complete cds; and T
             cell receptor beta chain (Tcr) gene, partial cds
          Length = 169781

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 408   atcaaatgtaaagcctaaatt 428
             |||||||||||||||||||||
Sbjct: 52306 atcaaatgtaaagcctaaatt 52286
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>gb|AC156400.9| Mus musculus 6 BAC RP24-299B14 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 158629

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 408    atcaaatgtaaagcctaaatt 428
              |||||||||||||||||||||
Sbjct: 142869 atcaaatgtaaagcctaaatt 142849
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>emb|AL663072.12| Mouse DNA sequence from clone RP23-22J3 on chromosome X, complete
              sequence
          Length = 249536

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 324    gagctccatttgttgttactc 344
              |||||||||||||||||||||
Sbjct: 142989 gagctccatttgttgttactc 142969
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>ref|NM_123473.2| Arabidopsis thaliana glycerophosphodiester phosphodiesterase
           AT5G41080 transcript variant AT5G41080.1 mRNA, complete
           cds
          Length = 1316

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 81  aatccaaagaagggaaggttttga 104
           |||| |||||||||||||||||||
Sbjct: 460 aatctaaagaagggaaggttttga 483
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>ref|NM_203136.1| Arabidopsis thaliana glycerophosphodiester phosphodiesterase
           AT5G41080 transcript variant AT5G41080.2 mRNA, complete
           cds
          Length = 1408

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 81  aatccaaagaagggaaggttttga 104
           |||| |||||||||||||||||||
Sbjct: 552 aatctaaagaagggaaggttttga 575
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>gb|AC131780.5| Mus musculus BAC clone RP24-340I7 from chromosome 9, complete sequence
          Length = 176274

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 108   aaagcagaagatcttttcag 127
             ||||||||||||||||||||
Sbjct: 37462 aaagcagaagatcttttcag 37481
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>gb|CP000057.1| Haemophilus influenzae strain 86-028NP, complete genome
          Length = 1913428

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 18     cggtgaaaatttcagtaatt 37
              ||||||||||||||||||||
Sbjct: 728553 cggtgaaaatttcagtaatt 728534
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>gb|AE016827.1| Mannheimia succiniciproducens MBEL55E, complete genome
          Length = 2314078

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 18      cggtgaaaatttcagtaatt 37
               ||||||||||||||||||||
Sbjct: 2283060 cggtgaaaatttcagtaatt 2283079
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>gb|AC091627.2| Solanum demissum chromosome 11 BAC PGEC513 genomic sequence, complete
             sequence
          Length = 77821

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 423   taaattctgattttgtgttt 442
             ||||||||||||||||||||
Sbjct: 33779 taaattctgattttgtgttt 33798
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>gb|AC009403.5| Homo sapiens PAC clone RP5-1015O24 from 7, complete sequence
          Length = 168418

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 411   aaatgtaaagcctaaattct 430
             ||||||||||||||||||||
Sbjct: 66101 aaatgtaaagcctaaattct 66082
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>gb|AC116119.12| Mus musculus chromosome 12, clone RP23-76D19, complete sequence
          Length = 264410

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 21     tgaaaatttcagtaattact 40
              ||||||||||||||||||||
Sbjct: 249700 tgaaaatttcagtaattact 249719
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>ref|XM_851947.1| PREDICTED: Canis familiaris similar to fuse-binding
           protein-interacting repressor isoform a, transcript
           variant 6 (LOC607245), mRNA
          Length = 1801

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 310 atggtgtcttccccgagctc 329
           ||||||||||||||||||||
Sbjct: 431 atggtgtcttccccgagctc 412
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>ref|XM_851906.1| PREDICTED: Canis familiaris similar to fuse-binding
           protein-interacting repressor isoform a, transcript
           variant 5 (LOC607245), mRNA
          Length = 1700

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 310 atggtgtcttccccgagctc 329
           ||||||||||||||||||||
Sbjct: 330 atggtgtcttccccgagctc 311
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>ref|XM_851865.1| PREDICTED: Canis familiaris similar to fuse-binding
           protein-interacting repressor isoform a, transcript
           variant 4 (LOC607245), mRNA
          Length = 1792

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 310 atggtgtcttccccgagctc 329
           ||||||||||||||||||||
Sbjct: 422 atggtgtcttccccgagctc 403
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>ref|XM_851826.1| PREDICTED: Canis familiaris similar to fuse-binding
           protein-interacting repressor isoform a, transcript
           variant 3 (LOC607245), mRNA
          Length = 1733

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 310 atggtgtcttccccgagctc 329
           ||||||||||||||||||||
Sbjct: 363 atggtgtcttccccgagctc 344
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>ref|XM_843617.1| PREDICTED: Canis familiaris similar to fuse-binding
           protein-interacting repressor isoform a, transcript
           variant 1 (LOC607245), mRNA
          Length = 1874

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 310 atggtgtcttccccgagctc 329
           ||||||||||||||||||||
Sbjct: 504 atggtgtcttccccgagctc 485
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>gb|AC137702.18| Medicago truncatula clone mth2-7k10, complete sequence
          Length = 94750

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 423  taaattctgattttgtgttt 442
            ||||||||||||||||||||
Sbjct: 2040 taaattctgattttgtgttt 2021
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>gb|AC140722.11| Medicago truncatula clone mth2-14e20, complete sequence
          Length = 97982

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 423   taaattctgattttgtgttt 442
             ||||||||||||||||||||
Sbjct: 77252 taaattctgattttgtgttt 77271
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>gb|AC110418.7| Homo sapiens 3 BAC RP11-711F20 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 148914

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 342    ctctttgaaggaagggattatacc 365
              ||||||||||| ||||||||||||
Sbjct: 108945 ctctttgaaggcagggattatacc 108922
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>gb|AC004106.1| Homo sapiens Xp22 BAC GSHB-45N23 (Genome Systems Human BAC library)
             complete sequence
          Length = 190482

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 336   ttgttactctttgaaggaag 355
             ||||||||||||||||||||
Sbjct: 90879 ttgttactctttgaaggaag 90860
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>emb|BX855610.5| Zebrafish DNA sequence from clone DKEY-121J17 in linkage group 3
             Contains the gene for a novel protein similar to
             vertebrate protein kinase, cGMP-dependent, type I (PRKG1),
             the gene for a novel protein similar to vertebrate
             potassium channel, subfamily K, member 2 (KCNK2), the gene
             for a novel protein similar to human and mouse squamous
             cell carcinoma antigen recognized by T cells 2 (SART2),
             the gene for a novel protein similar to vertebrate SET and
             MYND domain containing 2 (SYMD2), a novel gene and six CpG
             islands, complete sequence
          Length = 139210

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 248   cttggccttctcatggtgcaaagc 271
             |||||||||| |||||||||||||
Sbjct: 52637 cttggccttcccatggtgcaaagc 52614
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>gb|AC146331.35| Medicago truncatula clone mth2-7h18, complete sequence
          Length = 138838

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 423   taaattctgattttgtgttt 442
             ||||||||||||||||||||
Sbjct: 53178 taaattctgattttgtgttt 53197
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>ref|NM_001030225.1| Danio rerio si:dkey-121j17.2 (si:dkey-121j17.2), mRNA
          Length = 3047

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 248  cttggccttctcatggtgcaaagc 271
            |||||||||| |||||||||||||
Sbjct: 1522 cttggccttcccatggtgcaaagc 1499
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>gb|AC092719.3| Homo sapiens chromosome 16 clone RP11-338J22, complete sequence
          Length = 177527

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 32    gtaattactcagcatggcat 51
             ||||||||||||||||||||
Sbjct: 39286 gtaattactcagcatggcat 39305
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>gb|AC104835.3| Homo sapiens chromosome 3 clone RP11-27J5, complete sequence
          Length = 192570

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 418   aagcctaaattctgattttg 437
             ||||||||||||||||||||
Sbjct: 85766 aagcctaaattctgattttg 85785
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>emb|BX832115.1|CNS09ZUX Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH52ZF03 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1353

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 81  aatccaaagaagggaaggttttga 104
           |||| |||||||||||||||||||
Sbjct: 566 aatctaaagaagggaaggttttga 589
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>emb|BX831058.1|CNS09ZES Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS54ZD06 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1376

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 81  aatccaaagaagggaaggttttga 104
           |||| |||||||||||||||||||
Sbjct: 551 aatctaaagaagggaaggttttga 574
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>emb|BX831967.1|CNS09ZLV Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH42ZE03 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1196

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 81  aatccaaagaagggaaggttttga 104
           |||| |||||||||||||||||||
Sbjct: 414 aatctaaagaagggaaggttttga 437
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>gb|AC019129.8| Homo sapiens BAC clone RP11-559M23 from 2, complete sequence
          Length = 172611

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 285    ggcaaggaaaaatgaagaccagaa 308
              ||||||||||| ||||||||||||
Sbjct: 117257 ggcaaggaaaagtgaagaccagaa 117234
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>gb|AC155819.2| Mus musculus BAC clone RP23-402F16 from chromosome 12, complete
            sequence
          Length = 201181

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 118  atcttttcagaggagtttga 137
            ||||||||||||||||||||
Sbjct: 8221 atcttttcagaggagtttga 8202
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>emb|BX470088.11| Zebrafish DNA sequence from clone DKEY-171E12 in linkage group 7,
             complete sequence
          Length = 102546

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 110   agcagaagatcttttcagaggagt 133
             |||||| |||||||||||||||||
Sbjct: 33518 agcagatgatcttttcagaggagt 33541
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>gb|AC157893.2| Medicago truncatula chromosome 7 BAC clone mth2-7m13, complete sequence
          Length = 140479

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 423   taaattctgattttgtgttt 442
             ||||||||||||||||||||
Sbjct: 53798 taaattctgattttgtgttt 53779
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>dbj|AK117378.1| Arabidopsis thaliana At5g41080 mRNA for unknown protein, complete
            cds, clone: RAFL16-95-M21
          Length = 2157

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 81   aatccaaagaagggaaggttttga 104
            |||| |||||||||||||||||||
Sbjct: 1320 aatctaaagaagggaaggttttga 1343
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>dbj|AB010072.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MEE6
          Length = 83698

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 81    aatccaaagaagggaaggttttga 104
             |||| |||||||||||||||||||
Sbjct: 32457 aatctaaagaagggaaggttttga 32480
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>emb|AJ278581.1|HSA278581 Homo sapiens DREV gene and IGSF6 gene for immunoglobulin superfamily 6
             protein
          Length = 68689

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 32    gtaattactcagcatggcat 51
             ||||||||||||||||||||
Sbjct: 47031 gtaattactcagcatggcat 47050
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>gb|AC155808.2| Mus musculus BAC clone RP24-267H3 from 12, complete sequence
          Length = 184888

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 118   atcttttcagaggagtttga 137
             ||||||||||||||||||||
Sbjct: 60515 atcttttcagaggagtttga 60534
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>gb|AC156563.1| Mus musculus BAC clone RP24-255E14 from 12, complete sequence
          Length = 175641

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 188    tctatcacctctggctttta 207
              ||||||||||||||||||||
Sbjct: 157759 tctatcacctctggctttta 157778
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>gb|AC159234.2| Mus musculus BAC clone RP24-432D6 from chromosome 12, complete
            sequence
          Length = 152905

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 188  tctatcacctctggctttta 207
            ||||||||||||||||||||
Sbjct: 6863 tctatcacctctggctttta 6882
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>gb|AC154313.2| Mus musculus BAC clone RP23-354M21 from chromosome 12, complete sequence
          Length = 220909

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 21     tgaaaatttcagtaattact 40
              ||||||||||||||||||||
Sbjct: 183320 tgaaaatttcagtaattact 183301
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>gb|AC140318.4| Mus musculus BAC clone RP23-400F19 from 9, complete sequence
          Length = 180211

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 108    aaagcagaagatcttttcag 127
              ||||||||||||||||||||
Sbjct: 167112 aaagcagaagatcttttcag 167131
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>emb|AL928896.6| Mouse DNA sequence from clone RP23-42H18 on chromosome 2, complete
              sequence
          Length = 193932

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 85     caaagaagggaaggttttga 104
              ||||||||||||||||||||
Sbjct: 148056 caaagaagggaaggttttga 148075


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,838,667
Number of Sequences: 3902068
Number of extensions: 4838667
Number of successful extensions: 91282
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 91126
Number of HSP's gapped (non-prelim): 156
length of query: 500
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 478
effective length of database: 17,147,199,772
effective search space: 8196361491016
effective search space used: 8196361491016
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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