Clone Information

BLAST Search Result

Clone Name	bags13e04
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	R13AC_ARATH (Q9SVR0) 60S ribosomal protein L13a-3	255	7e-68
2	R13AD_ARATH (Q9FKC0) 60S ribosomal protein L13a-4	253	3e-67
3	R13AB_ARATH (Q9LRX8) 60S ribosomal protein L13a-2	253	3e-67
4	R13AA_ARATH (Q9SFU1) 60S ribosomal protein L13a-1	249	3e-66
5	RL13A_LUPLU (O49885) 60S ribosomal protein L13a	245	7e-65
6	RL13A_PICMA (O65055) 60S ribosomal protein L13a	240	2e-63
7	RL13A_BOVIN (Q3SZ90) 60S ribosomal protein L13a	187	2e-47
8	RL13A_PONPY (Q5RA38) 60S ribosomal protein L13a	186	5e-47
9	RL13A_HUMAN (P40429) 60S ribosomal protein L13a (23 kDa highly b...	185	7e-47
10	RL13A_MACFA (Q4R8Z2) 60S ribosomal protein L13a	184	1e-46
11	RL13A_RAT (P35427) 60S ribosomal protein L13a	182	7e-46
12	RL13A_MOUSE (P19253) 60S ribosomal protein L13a (Transplantation...	180	2e-45
13	RL13A_SALTR (Q91487) 60S ribosomal protein L13a (Transplantation...	178	8e-45
14	RL13A_CYAPA (P93099) 60S ribosomal protein L13a	177	1e-44
15	RL16_NEUCR (Q9P720) 60S ribosomal protein L16	156	3e-38
16	RL13A_SPOFR (Q962U0) 60S ribosomal protein L13A	152	6e-37
17	RL13A_DROME (Q9VNE9) 60S ribosomal protein L13A	152	6e-37
18	RL13A_CHOPR (Q8MUR4) 60S ribosomal protein L13A	150	3e-36
19	RL13A_PIG (Q95307) 60S ribosomal protein L13a (Fragment)	146	4e-35
20	RL16B_SCHPO (O42991) 60S ribosomal protein L16-B	146	4e-35
21	RL16A_SCHPO (O42848) 60S ribosomal protein L16-A	145	8e-35
22	RL16A_YEAST (P26784) 60S ribosomal protein L16-A (L13A) (RP22)	144	1e-34
23	RL13A_CAEEL (Q27389) 60S ribosomal protein L13a	144	1e-34
24	RL16B_YEAST (P26785) 60S ribosomal protein L16-B (YL15) (RP23)	142	6e-34
25	RL16C_SCHPO (O43004) 60S ribosomal protein L16-C	141	1e-33
26	RL13_ARCFU (O29137) 50S ribosomal protein L13P	56	8e-08
27	RL13_PYRHO (O59300) 50S ribosomal protein L13P	56	8e-08
28	RL13_PYRAB (Q9V196) 50S ribosomal protein L13P	55	1e-07
29	RLSX_METTH (O26146) Fused L13/S9 ribosomal protein [Includes: 50...	53	5e-07
30	RL13_HALMA (P29198) 50S ribosomal protein L13P (Hmal13)	47	3e-05
31	RL13_AERPE (Q9YB50) 50S ribosomal protein L13P	46	6e-05
32	RL13_SULSO (P95991) 50S ribosomal protein L13P	46	6e-05
33	RL13_METJA (P54023) 50S ribosomal protein L13P	44	2e-04
34	RL13_HALSA (Q9HQJ3) 50S ribosomal protein L13P	43	7e-04
35	RL13_SULAC (P39473) 50S ribosomal protein L13P	40	0.006
36	MAFB_HUMAN (Q9Y5Q3) Transcription factor MafB (V-maf musculoapon...	32	0.93
37	RL13_HELPY (P56038) 50S ribosomal protein L13	32	1.6
38	MAFB_RAT (P54842) Transcription factor MafB (V-maf musculoaponeu...	31	2.1
39	NAT_MYCSM (O86309) Arylamine N-acetyltransferase (EC 2.3.1.5)	31	2.7
40	MAFB_MOUSE (P54841) Transcription factor MafB (V-maf musculoapon...	31	2.7
41	EMID2_MOUSE (Q91VF6) Collagen alpha-1(XXVI) chain precursor (EMI...	31	2.7
42	ENG2_YEAST (Q12168) Endo-1,3(4)-beta-glucanase 2 (EC 3.2.1.6) (E...	31	2.7
43	GLYA_HALSA (Q9HPY5) Serine hydroxymethyltransferase (EC 2.1.2.1)...	30	3.5
44	GLYA_HALMA (Q5V3D7) Serine hydroxymethyltransferase (EC 2.1.2.1)...	30	3.5
45	Y2126_MYCBO (P64946) Hypothetical protein Mb2126 precursor	30	3.5
46	Y2100_MYCTU (P64945) Hypothetical protein Rv2100/MT2160 precursor	30	3.5
47	RK13_PORPU (P51292) Chloroplast 50S ribosomal protein L13	30	3.5
48	RL13_HELPJ (Q9ZMY6) 50S ribosomal protein L13	30	4.6
49	NOP14_HUMAN (P78316) Probable nucleolar complex protein 14	30	4.6
50	MURA_RHORT (Q2RQ67) UDP-N-acetylglucosamine 1-carboxyvinyltransf...	30	4.6
51	BCSC4_ACEXY (Q9WX71) Cellulose synthase 2 operon protein C precu...	30	6.0
52	GLYA_NATPD (Q3IRX5) Serine hydroxymethyltransferase (EC 2.1.2.1)...	30	6.0
53	IWS1_XENTR (Q505H7) IWS1-like protein	29	7.9
54	INVO_PIG (P18175) Involucrin	29	7.9
55	YCX2_CHLMO (P09754) Hypothetical 35.9 kDa protein in psbA intron 2	29	7.9
56	HSLU_RALSO (Q8Y3D8) ATP-dependent hsl protease ATP-binding subun...	29	7.9
57	SATB2_HUMAN (Q9UPW6) DNA-binding protein SATB2 (Special AT-rich ...	29	7.9
58	VNUA_PRVKA (P33485) Probable nuclear antigen	29	7.9

>R13AC_ARATH (Q9SVR0) 60S ribosomal protein L13a-3|
          Length = 206

 Score =  255 bits (651), Expect = 7e-68
 Identities = 121/160 (75%), Positives = 133/160 (83%)
 Frame = +3

Query: 36  MCISGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTPRGEAALA 215
           +C+SGGLVRQKMKY+RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKT RG AALA
Sbjct: 46  ICLSGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALA 105

Query: 216 RLKAFEGVPPPYDRTKRMVIPDALKVLRLQPGHKYCLXGELSKEVGWNYHXXXXXXXXXX 395
           RLK FEG+PPPYD+ KRMVIPDALKVLRLQ GHKYCL G LS EVGWN++          
Sbjct: 106 RLKVFEGIPPPYDKIKRMVIPDALKVLRLQSGHKYCLLGRLSSEVGWNHYDTIKELETKR 165

Query: 396 XXXXXVSYDRRKQLAKLRVKAEKAAEEKLGSQLDILAPIK 515
                V Y+R+KQL KLR KAEK AEE+LGSQLD+LAP+K
Sbjct: 166 KERSQVMYERKKQLNKLRTKAEKVAEERLGSQLDVLAPVK 205

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>R13AD_ARATH (Q9FKC0) 60S ribosomal protein L13a-4|
          Length = 206

 Score =  253 bits (645), Expect = 3e-67
 Identities = 122/160 (76%), Positives = 133/160 (83%)
 Frame = +3

Query: 36  MCISGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTPRGEAALA 215
           +C+SGGLVRQKMKY+RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKT RG AALA
Sbjct: 46  ICLSGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALA 105

Query: 216 RLKAFEGVPPPYDRTKRMVIPDALKVLRLQPGHKYCLXGELSKEVGWNYHXXXXXXXXXX 395
           RLK +EGVP PYD+ KRMVIPDALKVLRLQ GHKYCL G LS EVGWN++          
Sbjct: 106 RLKVYEGVPTPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELETKR 165

Query: 396 XXXXXVSYDRRKQLAKLRVKAEKAAEEKLGSQLDILAPIK 515
                V Y+R+KQL KLRVKAEK AEEKLG+QLDILAP+K
Sbjct: 166 KERAHVVYERKKQLNKLRVKAEKVAEEKLGAQLDILAPVK 205

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>R13AB_ARATH (Q9LRX8) 60S ribosomal protein L13a-2|
          Length = 206

 Score =  253 bits (645), Expect = 3e-67
 Identities = 122/160 (76%), Positives = 131/160 (81%)
 Frame = +3

Query: 36  MCISGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTPRGEAALA 215
           +C+SGGLVRQKMKY+RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKT RG AALA
Sbjct: 46  ICLSGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALA 105

Query: 216 RLKAFEGVPPPYDRTKRMVIPDALKVLRLQPGHKYCLXGELSKEVGWNYHXXXXXXXXXX 395
           RLK FEGVPPPYD+ KRMVIPDALKVLRLQ GHKYCL G LS EVGWN++          
Sbjct: 106 RLKVFEGVPPPYDKVKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELEVKR 165

Query: 396 XXXXXVSYDRRKQLAKLRVKAEKAAEEKLGSQLDILAPIK 515
                  Y+R+KQL KLR KAEK AEEKLGSQLD+LA IK
Sbjct: 166 KERSQALYERKKQLTKLRAKAEKVAEEKLGSQLDVLASIK 205

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>R13AA_ARATH (Q9SFU1) 60S ribosomal protein L13a-1|
          Length = 206

 Score =  249 bits (637), Expect = 3e-66
 Identities = 119/160 (74%), Positives = 131/160 (81%)
 Frame = +3

Query: 36  MCISGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTPRGEAALA 215
           +C+SGGLVRQKMKY+RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKT RG  ALA
Sbjct: 46  ICLSGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGANALA 105

Query: 216 RLKAFEGVPPPYDRTKRMVIPDALKVLRLQPGHKYCLXGELSKEVGWNYHXXXXXXXXXX 395
           RLK FEGVP PYD+ KRMV+PDALKVLRLQ GHKYCL G LS EVGWN++          
Sbjct: 106 RLKVFEGVPTPYDKIKRMVVPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELENKR 165

Query: 396 XXXXXVSYDRRKQLAKLRVKAEKAAEEKLGSQLDILAPIK 515
                  Y+R+KQL+KLR KAEK AEEKLGSQLD+LAP+K
Sbjct: 166 KERAQAVYERKKQLSKLRAKAEKVAEEKLGSQLDVLAPVK 205

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>RL13A_LUPLU (O49885) 60S ribosomal protein L13a|
          Length = 205

 Score =  245 bits (625), Expect = 7e-65
 Identities = 119/160 (74%), Positives = 133/160 (83%)
 Frame = +3

Query: 36  MCISGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTPRGEAALA 215
           +CISGGLVRQKMKYLRFLRKRMNTKPSHGPIH  APSKIFWRTVRGMIPHKT RGE ALA
Sbjct: 46  ICISGGLVRQKMKYLRFLRKRMNTKPSHGPIHC-APSKIFWRTVRGMIPHKTKRGEHALA 104

Query: 216 RLKAFEGVPPPYDRTKRMVIPDALKVLRLQPGHKYCLXGELSKEVGWNYHXXXXXXXXXX 395
           RLK +EG+PPP+D+ KR+V+PDALKVLRLQ GHKYCL G+LS EVGWNY+          
Sbjct: 105 RLKVYEGIPPPFDKQKRLVVPDALKVLRLQKGHKYCLLGQLSSEVGWNYYDTIKELEKKR 164

Query: 396 XXXXXVSYDRRKQLAKLRVKAEKAAEEKLGSQLDILAPIK 515
                V Y+R+KQL KLRVKAE+ A+EKLGSQLDILAP+K
Sbjct: 165 KERSQVVYERKKQLNKLRVKAEQVAQEKLGSQLDILAPVK 204

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>RL13A_PICMA (O65055) 60S ribosomal protein L13a|
          Length = 206

 Score =  240 bits (612), Expect = 2e-63
 Identities = 115/160 (71%), Positives = 131/160 (81%)
 Frame = +3

Query: 36  MCISGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTPRGEAALA 215
           +C+SGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPS+I WRT+RGMIPHKT RG AALA
Sbjct: 46  ICMSGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPSRILWRTIRGMIPHKTKRGAAALA 105

Query: 216 RLKAFEGVPPPYDRTKRMVIPDALKVLRLQPGHKYCLXGELSKEVGWNYHXXXXXXXXXX 395
            L+AFEGVPPPYDR KRMVIPDALKVLRLQPGHKYCL G LSKEVGW++           
Sbjct: 106 TLRAFEGVPPPYDRKKRMVIPDALKVLRLQPGHKYCLLGRLSKEVGWHHFDTITELEEKR 165

Query: 396 XXXXXVSYDRRKQLAKLRVKAEKAAEEKLGSQLDILAPIK 515
                VSY+RRKQLAKLR KA + AE++L  ++++LA +K
Sbjct: 166 KAKAQVSYERRKQLAKLRSKAVELAEKQLAPEMELLASLK 205

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>RL13A_BOVIN (Q3SZ90) 60S ribosomal protein L13a|
          Length = 202

 Score =  187 bits (475), Expect = 2e-47
 Identities = 87/154 (56%), Positives = 108/154 (70%)
 Frame = +3

Query: 42  ISGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTPRGEAALARL 221
           ISG   R K+KYL FLRKRMNT PS GP HFRAPS+IFWRTVRGM+PHKT RG+AAL RL
Sbjct: 42  ISGNFYRNKLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALERL 101

Query: 222 KAFEGVPPPYDRTKRMVIPDALKVLRLQPGHKYCLXGELSKEVGWNYHXXXXXXXXXXXX 401
           K F+G+PPPYD+ KRMV+P ALKV+RL+P  K+   G L+ EVGW Y             
Sbjct: 102 KVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKE 161

Query: 402 XXXVSYDRRKQLAKLRVKAEKAAEEKLGSQLDIL 503
              + Y ++KQL +LR +AEK  E+K+G   ++L
Sbjct: 162 KAKIHYRKKKQLMRLRKQAEKNIEKKIGKFTEVL 195

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>RL13A_PONPY (Q5RA38) 60S ribosomal protein L13a|
          Length = 202

 Score =  186 bits (471), Expect = 5e-47
 Identities = 86/154 (55%), Positives = 107/154 (69%)
 Frame = +3

Query: 42  ISGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTPRGEAALARL 221
           ISG   R K+KYL FLRKRMNT PS GP HFRAPS+IFWRTVRGM+PHKT RG+AAL RL
Sbjct: 42  ISGNFYRNKLKYLAFLRKRMNTSPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRL 101

Query: 222 KAFEGVPPPYDRTKRMVIPDALKVLRLQPGHKYCLXGELSKEVGWNYHXXXXXXXXXXXX 401
           K F+G+PPPYD+ KRMV+P ALKV+RL+P  K+   G L+ EVGW Y             
Sbjct: 102 KVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKE 161

Query: 402 XXXVSYDRRKQLAKLRVKAEKAAEEKLGSQLDIL 503
              + Y ++KQL +LR +AEK  E+K+    ++L
Sbjct: 162 KAKIHYRKKKQLVRLRKQAEKNVEKKIDKYTEVL 195

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>RL13A_HUMAN (P40429) 60S ribosomal protein L13a (23 kDa highly basic protein)|
          Length = 202

 Score =  185 bits (470), Expect = 7e-47
 Identities = 86/154 (55%), Positives = 107/154 (69%)
 Frame = +3

Query: 42  ISGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTPRGEAALARL 221
           ISG   R K+KYL FLRKRMNT PS GP HFRAPS+IFWRTVRGM+PHKT RG+AAL RL
Sbjct: 42  ISGNFYRNKLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRL 101

Query: 222 KAFEGVPPPYDRTKRMVIPDALKVLRLQPGHKYCLXGELSKEVGWNYHXXXXXXXXXXXX 401
           K F+G+PPPYD+ KRMV+P ALKV+RL+P  K+   G L+ EVGW Y             
Sbjct: 102 KVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKE 161

Query: 402 XXXVSYDRRKQLAKLRVKAEKAAEEKLGSQLDIL 503
              + Y ++KQL +LR +AEK  E+K+    ++L
Sbjct: 162 KAKIHYRKKKQLMRLRKQAEKNVEKKIDKYTEVL 195

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>RL13A_MACFA (Q4R8Z2) 60S ribosomal protein L13a|
          Length = 202

 Score =  184 bits (468), Expect = 1e-46
 Identities = 86/154 (55%), Positives = 106/154 (68%)
 Frame = +3

Query: 42  ISGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTPRGEAALARL 221
           ISG   R K+KYL FLRKRMNT PS GP HFRAPS+IFWRTVRGM+PHKT RG+AAL RL
Sbjct: 42  ISGNFYRNKLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRL 101

Query: 222 KAFEGVPPPYDRTKRMVIPDALKVLRLQPGHKYCLXGELSKEVGWNYHXXXXXXXXXXXX 401
           K F+G+PPPYD+ KRMV+P ALKV+RL+P  K+   G L+ EVGW Y             
Sbjct: 102 KVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTTTLEEKRKE 161

Query: 402 XXXVSYDRRKQLAKLRVKAEKAAEEKLGSQLDIL 503
              + Y ++KQL +LR +AEK  E+K+     +L
Sbjct: 162 KAKIHYRKKKQLMRLRKQAEKNVEKKIDKYTQVL 195

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>RL13A_RAT (P35427) 60S ribosomal protein L13a|
          Length = 202

 Score =  182 bits (461), Expect = 7e-46
 Identities = 85/154 (55%), Positives = 106/154 (68%)
 Frame = +3

Query: 42  ISGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTPRGEAALARL 221
           ISG   R K+KYL FLRKRMNT PS GP HFRAPS+IFWRTVRGM+PHKT RG+AAL RL
Sbjct: 42  ISGNFYRNKLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALERL 101

Query: 222 KAFEGVPPPYDRTKRMVIPDALKVLRLQPGHKYCLXGELSKEVGWNYHXXXXXXXXXXXX 401
           K  +G+PPPYD+ KRMV+P ALKV+RL+P  K+   G L+ EVGW Y             
Sbjct: 102 KVLDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKE 161

Query: 402 XXXVSYDRRKQLAKLRVKAEKAAEEKLGSQLDIL 503
              + Y ++KQL +LR +AEK  E+K+    ++L
Sbjct: 162 KAKIHYRKKKQLLRLRKQAEKNVEKKICKFTEVL 195

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>RL13A_MOUSE (P19253) 60S ribosomal protein L13a (Transplantation antigen P198)|
           (Tum-P198 antigen)
          Length = 202

 Score =  180 bits (457), Expect = 2e-45
 Identities = 84/154 (54%), Positives = 106/154 (68%)
 Frame = +3

Query: 42  ISGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTPRGEAALARL 221
           ISG   R K+KYL FLRKRMNT PS GP HFRAPS+IFWRTVRGM+PHKT RG+AAL RL
Sbjct: 42  ISGNFYRNKLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALERL 101

Query: 222 KAFEGVPPPYDRTKRMVIPDALKVLRLQPGHKYCLXGELSKEVGWNYHXXXXXXXXXXXX 401
           K  +G+PPPYD+ KRMV+P ALKV+RL+P  K+   G L+ EVGW Y             
Sbjct: 102 KVLDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKE 161

Query: 402 XXXVSYDRRKQLAKLRVKAEKAAEEKLGSQLDIL 503
              + Y ++KQ+ +LR +AEK  E+K+    ++L
Sbjct: 162 KAKMHYRKKKQILRLRKQAEKNVEKKICKFTEVL 195

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>RL13A_SALTR (Q91487) 60S ribosomal protein L13a (Transplantation antigen P198|
           homolog) (Fragment)
          Length = 189

 Score =  178 bits (452), Expect = 8e-45
 Identities = 84/154 (54%), Positives = 102/154 (66%)
 Frame = +3

Query: 42  ISGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTPRGEAALARL 221
           ISG   R K+KYL FLRKRMNT PS GP HFRAPS+IFWRTVRGM+PHKT RG+AAL RL
Sbjct: 29  ISGNFYRNKLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALERL 88

Query: 222 KAFEGVPPPYDRTKRMVIPDALKVLRLQPGHKYCLXGELSKEVGWNYHXXXXXXXXXXXX 401
           K F+GVPPPYD+ KRMV+P ALK++RL+P  K+ L G L+ EVGW Y             
Sbjct: 89  KVFDGVPPPYDKRKRMVVPAALKIVRLKPTRKFALLGRLAHEVGWKYQAITATLEEKRKE 148

Query: 402 XXXVSYDRRKQLAKLRVKAEKAAEEKLGSQLDIL 503
              + Y ++K + KL   AEK  E  +     +L
Sbjct: 149 KAKIRYAKKKTVTKLSKLAEKNVESTISKYTAVL 182

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>RL13A_CYAPA (P93099) 60S ribosomal protein L13a|
          Length = 200

 Score =  177 bits (450), Expect = 1e-44
 Identities = 84/146 (57%), Positives = 99/146 (67%)
 Frame = +3

Query: 42  ISGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTPRGEAALARL 221
           ISG L R K+K+  FL+KRMNT P  GP HFR+P++I WRT+RGMIPHKTPRG AAL RL
Sbjct: 42  ISGSLFRNKLKFHAFLKKRMNTNPRRGPFHFRSPARILWRTIRGMIPHKTPRGAAALERL 101

Query: 222 KAFEGVPPPYDRTKRMVIPDALKVLRLQPGHKYCLXGELSKEVGWNYHXXXXXXXXXXXX 401
           KAFEGVPPPYD+ KRMVIP AL+VLRL+PG K+C+ G L+ EVGW +             
Sbjct: 102 KAFEGVPPPYDKMKRMVIPQALRVLRLKPGRKFCVLGRLATEVGWRHSDLVTRLEEKRKT 161

Query: 402 XXXVSYDRRKQLAKLRVKAEKAAEEK 479
                Y R+K L  LR KA  A   K
Sbjct: 162 KSAAFYARKKTLVNLRAKAAVAVASK 187

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>RL16_NEUCR (Q9P720) 60S ribosomal protein L16|
          Length = 202

 Score =  156 bits (395), Expect = 3e-38
 Identities = 77/145 (53%), Positives = 95/145 (65%), Gaps = 1/145 (0%)
 Frame = +3

Query: 42  ISGGLVRQKMKYLRFLRKRMNTKPSHG-PIHFRAPSKIFWRTVRGMIPHKTPRGEAALAR 218
           ISG   R K+KY  +LRK     P+ G P HFRAPS+IF++ VRGMIPHKT RG AAL R
Sbjct: 44  ISGEFFRAKLKYHSYLRKMTRYNPTRGGPFHFRAPSRIFYKAVRGMIPHKTARGAAALER 103

Query: 219 LKAFEGVPPPYDRTKRMVIPDALKVLRLQPGHKYCLXGELSKEVGWNYHXXXXXXXXXXX 398
           LK FEGVPPPYD+ K+MV+P AL+VLRLQPG K+C  G LS EVGW Y            
Sbjct: 104 LKVFEGVPPPYDKKKKMVVPQALRVLRLQPGRKFCTVGRLSSEVGWKYEDVVSRLEERRK 163

Query: 399 XXXXVSYDRRKQLAKLRVKAEKAAE 473
                 Y+R+K  A+   +A+K+A+
Sbjct: 164 AKGAAYYERKKVAARQLSEAKKSAK 188

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>RL13A_SPOFR (Q962U0) 60S ribosomal protein L13A|
          Length = 204

 Score =  152 bits (384), Expect = 6e-37
 Identities = 67/107 (62%), Positives = 82/107 (76%)
 Frame = +3

Query: 42  ISGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTPRGEAALARL 221
           ISG   R K+K++ FLRKR N  P+ GP HFRAPSKI W+TVRGMIPHKT RG++AL RL
Sbjct: 45  ISGNFFRNKLKFMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKSALRRL 104

Query: 222 KAFEGVPPPYDRTKRMVIPDALKVLRLQPGHKYCLXGELSKEVGWNY 362
           +A++G PPPYD  +R+V+P AL+V  L+PG KYC  G LS EVGW Y
Sbjct: 105 RAYDGCPPPYDNRRRVVVPAALRVFCLKPGRKYCHVGRLSHEVGWKY 151

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>RL13A_DROME (Q9VNE9) 60S ribosomal protein L13A|
          Length = 205

 Score =  152 bits (384), Expect = 6e-37
 Identities = 74/148 (50%), Positives = 97/148 (65%), Gaps = 4/148 (2%)
 Frame = +3

Query: 42  ISGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTPRGEAALARL 221
           +SG   R K+K+L +LRKR N  P+ GP HFRAPS+IF++ VRGMIPHKT RG+AALARL
Sbjct: 45  LSGHFYRNKIKFLAYLRKRCNVNPARGPFHFRAPSRIFYKAVRGMIPHKTKRGQAALARL 104

Query: 222 KAFEGVPPPYDRTKRMVIPDALKVLRLQPGHKYCLXGELSKEVGWNYHXXXXXXXXXXXX 401
           + F+G+P PYD+ +R+V+P A++VL L+   KYC  G LS EVGW+Y             
Sbjct: 105 RVFDGIPSPYDKRRRVVVPIAMRVLTLRSDRKYCQVGRLSHEVGWHYQDVIKSLERKRKA 164

Query: 402 XXXVSYDRRKQLAKLRVKAE----KAAE 473
              V+    ++L KL VKA     KAAE
Sbjct: 165 KLRVTLKHNRELKKLTVKARENIAKAAE 192

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>RL13A_CHOPR (Q8MUR4) 60S ribosomal protein L13A|
          Length = 204

 Score =  150 bits (378), Expect = 3e-36
 Identities = 66/107 (61%), Positives = 81/107 (75%)
 Frame = +3

Query: 42  ISGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTPRGEAALARL 221
           ISG   R K+K++ FLRKR N  P+ GP HFRAPSKI W+TVRGMIPHKT RG+ AL RL
Sbjct: 45  ISGNFFRNKLKFMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKDALRRL 104

Query: 222 KAFEGVPPPYDRTKRMVIPDALKVLRLQPGHKYCLXGELSKEVGWNY 362
           ++++G PPPYD  +R+V+P AL+V  L+PG KYC  G LS EVGW Y
Sbjct: 105 RSYDGCPPPYDNRRRVVVPAALRVFCLKPGRKYCHVGRLSHEVGWKY 151

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>RL13A_PIG (Q95307) 60S ribosomal protein L13a (Fragment)|
          Length = 137

 Score =  146 bits (368), Expect = 4e-35
 Identities = 68/99 (68%), Positives = 79/99 (79%)
 Frame = +3

Query: 42  ISGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTPRGEAALARL 221
           ISG   R K+KYL FLRKRMNT PS GP HFRAPS+IFWRTVRGM+PHKT RG+AAL RL
Sbjct: 39  ISGNFYRNKLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRL 98

Query: 222 KAFEGVPPPYDRTKRMVIPDALKVLRLQPGHKYCLXGEL 338
           K F+G+PPPYD+ KRMV+P ALKV+RL+   K+   G L
Sbjct: 99  KVFDGIPPPYDKKKRMVVPAALKVVRLKLTGKFXYLGRL 137

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>RL16B_SCHPO (O42991) 60S ribosomal protein L16-B|
          Length = 197

 Score =  146 bits (368), Expect = 4e-35
 Identities = 73/149 (48%), Positives = 95/149 (63%)
 Frame = +3

Query: 42  ISGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTPRGEAALARL 221
           ISG   R K+KYL +LRK     PS G  HFRAPS+IF + VRGM+PHKT RG+AAL  L
Sbjct: 44  ISGHFFRNKLKYLAYLRKACRYNPSRGAFHFRAPSRIFQKAVRGMLPHKTARGQAALEHL 103

Query: 222 KAFEGVPPPYDRTKRMVIPDALKVLRLQPGHKYCLXGELSKEVGWNYHXXXXXXXXXXXX 401
           +A EG+PPP+D+ KR+V+P AL+VLRL+PG KYC  G LS EVGW Y+            
Sbjct: 104 QAVEGIPPPFDKQKRVVVPAALRVLRLKPGRKYCTVGRLSSEVGWKYNDIVAKLE----- 158

Query: 402 XXXVSYDRRKQLAKLRVKAEKAAEEKLGS 488
                 +RRK  +    +A+ A ++K+ S
Sbjct: 159 ------ERRKVKSAAFYQAKLAKQKKIAS 181

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>RL16A_SCHPO (O42848) 60S ribosomal protein L16-A|
          Length = 197

 Score =  145 bits (366), Expect = 8e-35
 Identities = 66/107 (61%), Positives = 80/107 (74%)
 Frame = +3

Query: 42  ISGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTPRGEAALARL 221
           ISG   R K+KYL +LRK     PS G  HFRAPS+IF + VRGM+PHKT RG+AAL  L
Sbjct: 44  ISGHFFRNKLKYLAYLRKACRYNPSRGAFHFRAPSRIFQKAVRGMLPHKTARGQAALEHL 103

Query: 222 KAFEGVPPPYDRTKRMVIPDALKVLRLQPGHKYCLXGELSKEVGWNY 362
           +A EG+PPP+D+ KR+V+P AL+VLRL+PG KYC  G LS EVGW Y
Sbjct: 104 QAVEGIPPPFDKQKRVVVPAALRVLRLKPGRKYCTVGRLSSEVGWKY 150

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>RL16A_YEAST (P26784) 60S ribosomal protein L16-A (L13A) (RP22)|
          Length = 198

 Score =  144 bits (364), Expect = 1e-34
 Identities = 74/160 (46%), Positives = 94/160 (58%), Gaps = 1/160 (0%)
 Frame = +3

Query: 27  ARXMCISGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTPRGEA 206
           A  + ISG   R K+KY  FLRK      + GP HFRAPS+IF++ +RGM+ HKT RG+A
Sbjct: 37  AEELNISGEFFRNKLKYHDFLRKATAFNKTRGPFHFRAPSRIFYKALRGMVSHKTARGKA 96

Query: 207 ALARLKAFEGVPPPYDRTKRMVIPDALKVLRLQPGHKYCLXGELSKEVGWNYHXXXXXXX 386
           AL RLK FEG+PPPYD+ KR+V+P AL+VLRL+PG KY   G+LS  VGW Y        
Sbjct: 97  ALERLKVFEGIPPPYDKKKRVVVPQALRVLRLKPGRKYTTLGKLSTSVGWKYEDVVAKLE 156

Query: 387 XXXXXXXXVSYDRRKQLAKLRVKAE-KAAEEKLGSQLDIL 503
                     Y +++   K    A   AAE  +  QL  L
Sbjct: 157 AKRKVSSAEYYAKKRAFTKKVASANATAAESDVAKQLAAL 196

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>RL13A_CAEEL (Q27389) 60S ribosomal protein L13a|
          Length = 202

 Score =  144 bits (364), Expect = 1e-34
 Identities = 71/159 (44%), Positives = 95/159 (59%)
 Frame = +3

Query: 27  ARXMCISGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTPRGEA 206
           A  + ISG   R K+KY+ FLRKR N  P+ G  H+RAP KIFWRTVRGM+PHKT RG  
Sbjct: 39  AEEIVISGNFHRSKLKYMSFLRKRCNINPARGAFHYRAPGKIFWRTVRGMLPHKTNRGNE 98

Query: 207 ALARLKAFEGVPPPYDRTKRMVIPDALKVLRLQPGHKYCLXGELSKEVGWNYHXXXXXXX 386
           AL  L+A+EGVP  Y +TK +  P A +  RLQP  K+C+ G LS EVGW +        
Sbjct: 99  ALKNLRAYEGVPAKYQKTKSLHAPSASR-FRLQPRRKFCVVGRLSHEVGWQFQDVVAKLE 157

Query: 387 XXXXXXXXVSYDRRKQLAKLRVKAEKAAEEKLGSQLDIL 503
                     ++++K++ KL V+A+K A  K+     I+
Sbjct: 158 AKRKVKGAAYFEQKKKMDKLAVQAKKNAAPKIAQYQKII 196

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>RL16B_YEAST (P26785) 60S ribosomal protein L16-B (YL15) (RP23)|
          Length = 197

 Score =  142 bits (358), Expect = 6e-34
 Identities = 70/150 (46%), Positives = 89/150 (59%)
 Frame = +3

Query: 27  ARXMCISGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTPRGEA 206
           A  + ISG   R K+KY  FLRK      + GP HFRAPS+I ++ +RGM+ HKT RG+A
Sbjct: 36  AEALNISGEFFRNKLKYHDFLRKATAFNKTRGPFHFRAPSRILYKAIRGMVSHKTARGKA 95

Query: 207 ALARLKAFEGVPPPYDRTKRMVIPDALKVLRLQPGHKYCLXGELSKEVGWNYHXXXXXXX 386
           AL RLK FEG+PPPYD+ KR+V+P AL+VLRL+PG KY   G+LS  VGW Y        
Sbjct: 96  ALERLKIFEGIPPPYDKKKRVVVPQALRVLRLKPGRKYTTLGKLSTSVGWKYEDVVAKLE 155

Query: 387 XXXXXXXXVSYDRRKQLAKLRVKAEKAAEE 476
                     Y +++   K    A  AA E
Sbjct: 156 DKRKVRSAEYYAKKRAFTKKVSSASAAASE 185

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>RL16C_SCHPO (O43004) 60S ribosomal protein L16-C|
          Length = 197

 Score =  141 bits (355), Expect = 1e-33
 Identities = 64/107 (59%), Positives = 77/107 (71%)
 Frame = +3

Query: 42  ISGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTPRGEAALARL 221
           ISG   R K+KYL +LRK     PS G  HFRAPS+IF + VRGM+PHKT RG  AL  L
Sbjct: 44  ISGHFFRNKLKYLAYLRKACRYNPSRGAFHFRAPSRIFTKAVRGMLPHKTTRGNIALKNL 103

Query: 222 KAFEGVPPPYDRTKRMVIPDALKVLRLQPGHKYCLXGELSKEVGWNY 362
           +A EG+PPP+D+ KR+V+P AL+VLRL+P  KYC  G LS EVGW Y
Sbjct: 104 QALEGIPPPFDKQKRLVVPAALRVLRLKPSRKYCTIGRLSSEVGWKY 150

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>RL13_ARCFU (O29137) 50S ribosomal protein L13P|
          Length = 156

 Score = 55.8 bits (133), Expect = 8e-08
 Identities = 35/96 (36%), Positives = 49/96 (51%)
 Frame = +3

Query: 69  MKYLRFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTPRGEAALARLKAFEGVPPP 248
           M + R+  K        GP   R P +IF RTVRGM+P K+ RG  A  RL+ F GVP  
Sbjct: 59  MVFERYKEKYDRGSKEKGPYFPRHPERIFKRTVRGMLPWKSSRGRDAYRRLRVFMGVPEE 118

Query: 249 YDRTKRMVIPDALKVLRLQPGHKYCLXGELSKEVGW 356
               +   I DAL + ++    KY    E+S+ +G+
Sbjct: 119 LQGREFEKIEDAL-LEKVSKTDKYVTLAEVSRYLGF 153

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>RL13_PYRHO (O59300) 50S ribosomal protein L13P|
          Length = 142

 Score = 55.8 bits (133), Expect = 8e-08
 Identities = 35/97 (36%), Positives = 50/97 (51%)
 Frame = +3

Query: 72  KYLRFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTPRGEAALARLKAFEGVPPPY 251
           KY +    R  T P  GP + +   +I  RT+RGM+P KT RG  A  RLK + G+P  +
Sbjct: 48  KYKQRTGLRTLTNPRRGPFYPKRSDEIVRRTIRGMLPWKTDRGRKAFRRLKVYVGIPKEF 107

Query: 252 DRTKRMVIPDALKVLRLQPGHKYCLXGELSKEVGWNY 362
              +   I +A  V RL    KY   GE++K +G  +
Sbjct: 108 QDKQLETIVEA-HVSRLS-RPKYVTVGEVAKFLGGKF 142

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>RL13_PYRAB (Q9V196) 50S ribosomal protein L13P|
          Length = 142

 Score = 55.5 bits (132), Expect = 1e-07
 Identities = 35/97 (36%), Positives = 50/97 (51%)
 Frame = +3

Query: 72  KYLRFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTPRGEAALARLKAFEGVPPPY 251
           KY +    R  T P  GP + +   +I  RT+RGM+P KT RG  A  RLK + G+P  +
Sbjct: 48  KYKQRTGLRTLTNPRRGPFYPKRSDEIVRRTIRGMLPWKTDRGRKAFKRLKVYVGIPKEF 107

Query: 252 DRTKRMVIPDALKVLRLQPGHKYCLXGELSKEVGWNY 362
              +   I +A  V RL    KY   GE++K +G  +
Sbjct: 108 KDKQLETIVEA-HVSRLS-RPKYVTVGEVAKFLGGKF 142

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>RLSX_METTH (O26146) Fused L13/S9 ribosomal protein [Includes: 50S ribosomal|
           protein L13P; 30S ribosomal protein S9P]
          Length = 282

 Score = 53.1 bits (126), Expect = 5e-07
 Identities = 37/110 (33%), Positives = 58/110 (52%), Gaps = 1/110 (0%)
 Frame = +3

Query: 27  ARXMCISGGLVRQKMKYLRFLRKRMNTKPSH-GPIHFRAPSKIFWRTVRGMIPHKTPRGE 203
           A  + I+G       KY + + +   + P   GP + R P  IF RTVRGM+P+K  +G 
Sbjct: 35  AEKILITGSKEWAYGKYKQRIDRASISNPRRMGPKYPRRPDDIFRRTVRGMLPYKKSKGR 94

Query: 204 AALARLKAFEGVPPPYDRTKRMVIPDALKVLRLQPGHKYCLXGELSKEVG 353
            A   LKA+ G+P  +   + + IPDA K   ++ G +    GE+S+ +G
Sbjct: 95  EAFKGLKAYVGIPREFKDEEMVEIPDA-KAGSIKKGME---LGEISELLG 140

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>RL13_HALMA (P29198) 50S ribosomal protein L13P (Hmal13)|
          Length = 145

 Score = 47.4 bits (111), Expect = 3e-05
 Identities = 30/89 (33%), Positives = 47/89 (52%)
 Frame = +3

Query: 93  KRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTPRGEAALARLKAFEGVPPPYDRTKRMV 272
           KR++    +G  + + P  IF RT+RGM+PHK  RG  A   ++ + G   PYD    ++
Sbjct: 59  KRVDIGNDNGYFYPKRPDGIFKRTIRGMLPHKKQRGREAFESVRVYLG--NPYDEDGEVL 116

Query: 273 IPDALKVLRLQPGHKYCLXGELSKEVGWN 359
             D   + RL    K+   GE+S+ +G N
Sbjct: 117 --DGTSLDRLS-NIKFVTLGEISETLGAN 142

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>RL13_AERPE (Q9YB50) 50S ribosomal protein L13P|
          Length = 155

 Score = 46.2 bits (108), Expect = 6e-05
 Identities = 26/74 (35%), Positives = 39/74 (52%)
 Frame = +3

Query: 135 RAPSKIFWRTVRGMIPHKTPRGEAALARLKAFEGVPPPYDRTKRMVIPDALKVLRLQPGH 314
           R P ++F   VRGM+P    RG  ALARL+ + GVP      + +  P+A    RL    
Sbjct: 79  RTPQRLFKHAVRGMLPKNKARGRRALARLRVYVGVPDELKGREFVRFPEA-DASRL--SS 135

Query: 315 KYCLXGELSKEVGW 356
            Y   G +++++GW
Sbjct: 136 HYIELGAVARQLGW 149

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>RL13_SULSO (P95991) 50S ribosomal protein L13P|
          Length = 149

 Score = 46.2 bits (108), Expect = 6e-05
 Identities = 28/75 (37%), Positives = 44/75 (58%)
 Frame = +3

Query: 135 RAPSKIFWRTVRGMIPHKTPRGEAALARLKAFEGVPPPYDRTKRMVIPDALKVLRLQPGH 314
           R+P  I  RT+RGM+P K+ +G   L  +K + GVP  ++  + +  PD+  V RL+   
Sbjct: 78  RSPINIVKRTIRGMLP-KSSKGRRMLKNVKIYVGVPKEFEGRQFIKFPDS-DVSRLK--G 133

Query: 315 KYCLXGELSKEVGWN 359
           KY     +SKE+GW+
Sbjct: 134 KYVTVEVVSKELGWS 148

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>RL13_METJA (P54023) 50S ribosomal protein L13P|
          Length = 137

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 28/88 (31%), Positives = 41/88 (46%)
 Frame = +3

Query: 90  RKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTPRGEAALARLKAFEGVPPPYDRTKRM 269
           +K +      GP   R P  I  RT+R M+P+K P+G  A  R+K + G P      K +
Sbjct: 55  KKNVANPRRFGPKFPRRPDDILRRTIRKMLPYKKPKGREAFKRVKVYVGNP------KNL 108

Query: 270 VIPDALKVLRLQPGHKYCLXGELSKEVG 353
            + +  K+       KY    ELSK +G
Sbjct: 109 TVDE--KISHKLNTTKYITLAELSKHLG 134

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>RL13_HALSA (Q9HQJ3) 50S ribosomal protein L13P|
          Length = 145

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 28/90 (31%), Positives = 43/90 (47%)
 Frame = +3

Query: 90  RKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTPRGEAALARLKAFEGVPPPYDRTKRM 269
           R R N     GP + + P  IF R +RGM+P+K   G  AL  ++ + G P   D     
Sbjct: 58  RTRANLGSDRGPYYPKRPDGIFKRAIRGMLPYKQDDGREALDSVRVYVGNPMDEDGD--- 114

Query: 270 VIPDALKVLRLQPGHKYCLXGELSKEVGWN 359
            + D   + RL    ++    E+S+E+G N
Sbjct: 115 -VLDGTSLDRLST-IRFVTLSEVSEELGAN 142

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>RL13_SULAC (P39473) 50S ribosomal protein L13P|
          Length = 148

 Score = 39.7 bits (91), Expect = 0.006
 Identities = 40/110 (36%), Positives = 49/110 (44%), Gaps = 1/110 (0%)
 Frame = +3

Query: 27  ARXMCISGGLVRQKMKY-LRFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTPRGE 203
           A    ISG   R    Y L F  K M      G    R P  I  RTVRGM+P K   G+
Sbjct: 39  AEKAIISGPRSRVLEGYSLLFTVKTMQNPYRQGIRRPRNPINIVKRTVRGMLP-KNKLGK 97

Query: 204 AALARLKAFEGVPPPYDRTKRMVIPDALKVLRLQPGHKYCLXGELSKEVG 353
                LKA+ G+P   +  K M+  D   V RL+   KY    ELS+ +G
Sbjct: 98  QIYRNLKAYIGIPKELE-GKSMIRFDDADVSRLK--GKYITVAELSRLLG 144

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>MAFB_HUMAN (Q9Y5Q3) Transcription factor MafB (V-maf musculoaponeurotic|
           fibrosarcoma oncogene homolog B)
          Length = 323

 Score = 32.3 bits (72), Expect = 0.93
 Identities = 24/85 (28%), Positives = 35/85 (41%), Gaps = 8/85 (9%)
 Frame = +2

Query: 98  DEHQAVARSHPLPRPLENFLAHRARH--------DPAQDAPRRGCARQAEGVRGRPAAL* 253
           D  +A+  SHP+P+PL++F + R  H         P    P  G A    G    P    
Sbjct: 106 DAVEALIGSHPVPQPLQSFDSFRGAHHHHHHHHPHPHHAYPGAGVAHDELGPHAHP---- 161

Query: 254 SHQAYGHPRRAQGSEAAAGS*VLPS 328
            H  + H      S AA+ +  LP+
Sbjct: 162 -HHHHHHQASPPPSSAASPAQQLPT 185

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>RL13_HELPY (P56038) 50S ribosomal protein L13|
          Length = 141

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 15/39 (38%), Positives = 24/39 (61%)
 Frame = +3

Query: 135 RAPSKIFWRTVRGMIPHKTPRGEAALARLKAFEGVPPPY 251
           +AP K++   VRGM+P KT  G+A + +LK +     P+
Sbjct: 94  KAPEKLYHLAVRGMLP-KTKLGKAMIKKLKVYRDDKHPH 131

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>MAFB_RAT (P54842) Transcription factor MafB (V-maf musculoaponeurotic|
           fibrosarcoma oncogene homolog B) (Transcription factor
           MAF1)
          Length = 323

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 23/85 (27%), Positives = 34/85 (40%), Gaps = 8/85 (9%)
 Frame = +2

Query: 98  DEHQAVARSHPLPRPLENFLAHRARH--------DPAQDAPRRGCARQAEGVRGRPAAL* 253
           D  +A+  SHP+P+PL++F   R+ H         P    P  G      G    P    
Sbjct: 106 DAVEALIGSHPVPQPLQSFDGFRSAHHHHHHHHPHPHHGYPGAGVTHDELGPHAHP---- 161

Query: 254 SHQAYGHPRRAQGSEAAAGS*VLPS 328
            H  + H      S AA+ +  LP+
Sbjct: 162 -HHHHHHQASPPPSSAASPAQQLPT 185

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>NAT_MYCSM (O86309) Arylamine N-acetyltransferase (EC 2.3.1.5)|
          Length = 275

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 15/31 (48%), Positives = 18/31 (58%)
 Frame = -2

Query: 338 KLAXKAVLMTRLQPQNLERVGDDHTLGAIIR 246
           +L    V  TR +P  L R GDDHTL A +R
Sbjct: 140 RLEAGPVQQTRHEPYRLTRHGDDHTLAAQVR 170

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>MAFB_MOUSE (P54841) Transcription factor MafB (V-maf musculoaponeurotic|
           fibrosarcoma oncogene homolog B) (Transcription factor
           MAF1) (Segmentation protein KR) (Kreisler)
          Length = 323

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 23/85 (27%), Positives = 34/85 (40%), Gaps = 8/85 (9%)
 Frame = +2

Query: 98  DEHQAVARSHPLPRPLENFLAHRARH--------DPAQDAPRRGCARQAEGVRGRPAAL* 253
           D  +A+  SHP+P+PL++F   R+ H         P    P  G      G    P    
Sbjct: 106 DAVEALIGSHPVPQPLQSFDGFRSAHHHHHHHHPHPHHGYPGAGVTHDDLGQHAHP---- 161

Query: 254 SHQAYGHPRRAQGSEAAAGS*VLPS 328
            H  + H      S AA+ +  LP+
Sbjct: 162 -HHHHHHQASPPPSSAASPAQQLPT 185

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>EMID2_MOUSE (Q91VF6) Collagen alpha-1(XXVI) chain precursor (EMI|
           domain-containing protein 2) (Emu2 protein) (Emilin and
           multimerin domain-containing protein 2)
          Length = 440

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 6/70 (8%)
 Frame = -3

Query: 247 GGGTPSNAFSL----ASAASPRGVLCGIM--PRTVRQKIFEGARKWMGPCDGLVFIRLRR 86
           G G+P N +S           R V C +     TV Q++++  R W GPC  LV  R   
Sbjct: 41  GAGSPGNGYSSRRHWCHHTVTRTVSCQVQNGSETVVQRVYQSCR-WPGPCANLVSYRTLI 99

Query: 85  KRRYFIF*RT 56
           +  Y +  RT
Sbjct: 100 RPTYRVSYRT 109

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>ENG2_YEAST (Q12168) Endo-1,3(4)-beta-glucanase 2 (EC 3.2.1.6)|
           (Endo-1,4-beta-glucanase 2) (Endo-1,3-beta-glucanase 2)
           (Laminarinase-2)
          Length = 779

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 16/50 (32%), Positives = 23/50 (46%)
 Frame = +2

Query: 47  RRAGPSEDEVPPLPPQADEHQAVARSHPLPRPLENFLAHRARHDPAQDAP 196
           R  G +    PPLPP+A+    V  S    +P EN +A  +   P+   P
Sbjct: 15  RPGGTTNRGPPPLPPRANVQPPVCSSENSSKPRENRVAGESLRTPSSSNP 64

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>GLYA_HALSA (Q9HPY5) Serine hydroxymethyltransferase (EC 2.1.2.1) (Serine|
           methylase) (SHMT)
          Length = 415

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 6/55 (10%)
 Frame = -2

Query: 224 LQPGERSLAAGRLVRDHAAHGAPENFRGGA------EVDGTVRRLGVHPLAEEAE 78
           L PG++ L+       H +HG P NF G        EVD    RL    L E A+
Sbjct: 108 LAPGDKILSLDLTHGGHLSHGHPANFAGQLYEVEQYEVDAETGRLDYEALREHAD 162

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>GLYA_HALMA (Q5V3D7) Serine hydroxymethyltransferase (EC 2.1.2.1) (Serine|
           methylase) (SHMT)
          Length = 415

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 9/58 (15%)
 Frame = -2

Query: 224 LQPGERSLAAGRLVRDHAAHGAPENFRGGA---------EVDGTVRRLGVHPLAEEAE 78
           L+PG++ L+       H +HG P NF G           E  G V   G+H  AEE E
Sbjct: 108 LEPGDKILSLDLTHGGHLSHGHPANFAGQVYEVEQYKVDEETGYVDYEGLHDHAEEFE 165

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>Y2126_MYCBO (P64946) Hypothetical protein Mb2126 precursor|
          Length = 550

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 37/119 (31%), Positives = 47/119 (39%), Gaps = 5/119 (4%)
 Frame = -2

Query: 347 LLGKL-AXKAVLMTRLQPQNLERVGDDHTLGAIIRRRDALERLQPGERSLAAGRLVRDHA 171
           L G+L A  A ++ R   +    V +D       RR DAL  L  G   LA G       
Sbjct: 229 LWGRLYATDAAMLDRRLTEMAHGVCEDDPRTLAQRRADALGALAAGADHLACGC------ 282

Query: 170 AHGAPENFRGGAEVDGTVRRLGVHPLAEEAEVLHLLTDQPAGDA----HLPRTEPPPRP 6
             G P+   G    +   R  GV        V+H++ D  A DA    HL   EPP RP
Sbjct: 283 --GKPDCPSGAGNDE---RAAGV--------VIHVVADASALDAQPDPHLSGDEPPSRP 328

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>Y2100_MYCTU (P64945) Hypothetical protein Rv2100/MT2160 precursor|
          Length = 550

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 37/119 (31%), Positives = 47/119 (39%), Gaps = 5/119 (4%)
 Frame = -2

Query: 347 LLGKL-AXKAVLMTRLQPQNLERVGDDHTLGAIIRRRDALERLQPGERSLAAGRLVRDHA 171
           L G+L A  A ++ R   +    V +D       RR DAL  L  G   LA G       
Sbjct: 229 LWGRLYATDAAMLDRRLTEMAHGVCEDDPRTLAQRRADALGALAAGADHLACGC------ 282

Query: 170 AHGAPENFRGGAEVDGTVRRLGVHPLAEEAEVLHLLTDQPAGDA----HLPRTEPPPRP 6
             G P+   G    +   R  GV        V+H++ D  A DA    HL   EPP RP
Sbjct: 283 --GKPDCPSGAGNDE---RAAGV--------VIHVVADASALDAQPDPHLSGDEPPSRP 328

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>RK13_PORPU (P51292) Chloroplast 50S ribosomal protein L13|
          Length = 142

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 15/43 (34%), Positives = 24/43 (55%)
 Frame = +3

Query: 135 RAPSKIFWRTVRGMIPHKTPRGEAALARLKAFEGVPPPYDRTK 263
           R P++I  ++V+GM+P K P G     +LK + G   P+   K
Sbjct: 95  RLPNRIVEKSVKGMLP-KGPLGRKLFTKLKVYPGPSHPHAAQK 136

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>RL13_HELPJ (Q9ZMY6) 50S ribosomal protein L13|
          Length = 141

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = +3

Query: 135 RAPSKIFWRTVRGMIPHKTPRGEAALARLKAFEGVPPPY 251
           + P K++   VRGM+P KT  G+A + +LK +     P+
Sbjct: 94  KTPEKLYHLAVRGMLP-KTKLGKAMIKKLKVYRDDKHPH 131

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>NOP14_HUMAN (P78316) Probable nucleolar complex protein 14|
          Length = 857

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 18/64 (28%), Positives = 33/64 (51%)
 Frame = +3

Query: 156 WRTVRGMIPHKTPRGEAALARLKAFEGVPPPYDRTKRMVIPDALKVLRLQPGHKYCLXGE 335
           W+ ++ ++ HKTP+ E    R K  +  P  YD    M++ +    ++ QP ++     E
Sbjct: 225 WKEIQTLLSHKTPKSE---NRDKKEKPKPDAYD----MMVRELGFEMKAQPSNRMKTEAE 277

Query: 336 LSKE 347
           L+KE
Sbjct: 278 LAKE 281

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>MURA_RHORT (Q2RQ67) UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC|
           2.5.1.7) (Enoylpyruvate transferase)
           (UDP-N-acetylglucosamine enolpyruvyl transferase) (EPT)
          Length = 425

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 17/38 (44%), Positives = 21/38 (55%)
 Frame = -2

Query: 143 GGAEVDGTVRRLGVHPLAEEAEVLHLLTDQPAGDAHLP 30
           GGA +DGT+R  G    A     + LLTDQP    +LP
Sbjct: 8   GGAPLDGTIRIGGAKNAALTLMPVCLLTDQPVTLTNLP 45

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>BCSC4_ACEXY (Q9WX71) Cellulose synthase 2 operon protein C precursor|
          Length = 1307

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 32/107 (29%), Positives = 42/107 (39%), Gaps = 14/107 (13%)
 Frame = -2

Query: 350 DLLGKLAXKAVLMTR-----LQPQNLERVGDDHTLGAIIRRRDALERLQPGERSLAAGRL 186
           D+L +L   A  M R     +     +R GDD    A++RR  AL+   P  R   A  L
Sbjct: 513 DILTRLQRLAPAMARRLEAMMLSAQADRAGDDDGRIALLRRAQALDPDDPWVRLKLAHAL 572

Query: 185 --VRDHAAH-------GAPENFRGGAEVDGTVRRLGVHPLAEEAEVL 72
               DHAA         AP N    A   G +  +G H  A    +L
Sbjct: 573 DDAGDHAAAQAMMDALTAPRNASAQALQAGIIYAMGRHDTATAGALL 619

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>GLYA_NATPD (Q3IRX5) Serine hydroxymethyltransferase (EC 2.1.2.1) (Serine|
           methylase) (SHMT)
          Length = 424

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 6/58 (10%)
 Frame = -2

Query: 233 LERLQPGERSLAAGRLVRDHAAHGAPENFRGGA------EVDGTVRRLGVHPLAEEAE 78
           L  L+PG+R L+       H +HG P NF G        EVD     +    L E+AE
Sbjct: 105 LAMLEPGDRILSLELEHGGHLSHGHPANFTGQTYEVEQYEVDPETGYIDYDELHEQAE 162

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>IWS1_XENTR (Q505H7) IWS1-like protein|
          Length = 909

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 29/105 (27%), Positives = 37/105 (35%), Gaps = 1/105 (0%)
 Frame = +2

Query: 53  AGPSEDEVPPLPPQADEHQAVARSHPLPRPLENFLAHRARHDPAQDAPRRGCARQAEG-V 229
           A  SEDE P     +D        H      +   A RA  D   +AP +  A  +E   
Sbjct: 170 ASDSEDEAPAKHQGSDSEDEAPAKHVASDSEDEAPAKRAASDSEDEAPAKRAASDSEDEA 229

Query: 230 RGRPAAL*SHQAYGHPRRAQGSEAAAGS*VLPSRRAFQGGRVELP 364
             + AA  S       R A  SE  A     P++RA      E P
Sbjct: 230 PAKRAASDSEDEAPAKRAASDSEDEA-----PAKRAASDSEDEAP 269

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>INVO_PIG (P18175) Involucrin|
          Length = 347

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = +2

Query: 62  SEDEVPPLPPQADEHQA-VARSHPLPRPLENFLAHRARHDPAQDAPR 199
           S++ + P+ P AD  Q  V ++ PLP P +  L+      P +DA +
Sbjct: 16  SQEPLKPVSPPADTQQEQVKQATPLPAPCQKMLSELPVEVPLEDAEK 62

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>YCX2_CHLMO (P09754) Hypothetical 35.9 kDa protein in psbA intron 2|
          Length = 312

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +2

Query: 29  EXDVHLRRAGPSEDEVPPLPPQADEHQAVARS 124
           E  +  RR  P +  +PPLPP A+E +  A++
Sbjct: 91  ELQIEKRRENPPKLTLPPLPPPAEERKKPAKT 122

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>HSLU_RALSO (Q8Y3D8) ATP-dependent hsl protease ATP-binding subunit hslU|
          Length = 443

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = +3

Query: 411 VSYDRRKQLAKLRVKAEKAAEEKLGSQLDILAP 509
           V   R  ++ K+R KAE AAE++L   LD+L P
Sbjct: 109 VKQTRESEMKKVRAKAEDAAEDRL---LDVLIP 138

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>SATB2_HUMAN (Q9UPW6) DNA-binding protein SATB2 (Special AT-rich|
           sequence-binding protein 2)
          Length = 733

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = -2

Query: 89  EEAEVLHLLTDQPAGDAHLPRTEPPPRP 6
           E  +VLH    QPA ++  PR E PP P
Sbjct: 577 EPVQVLHRQQSQPAKESSPPREEAPPPP 604

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>VNUA_PRVKA (P33485) Probable nuclear antigen|
          Length = 1733

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 26/84 (30%), Positives = 31/84 (36%)
 Frame = +2

Query: 56  GPSEDEVPPLPPQADEHQAVARSHPLPRPLENFLAHRARHDPAQDAPRRGCARQAEGVRG 235
           G  +D  PP PP              PRP            P Q  P  G AR+     G
Sbjct: 266 GDRDDPPPPSPP--------------PRPPPPLPPPPPPPPPPQPPPAGGSARRRRR-GG 310

Query: 236 RPAAL*SHQAYGHPRRAQGSEAAA 307
            P      +  G  RRA+G+EAAA
Sbjct: 311 GPPGRGGRRRGGKRRRAEGTEAAA 334


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 70,681,750
Number of Sequences: 219361
Number of extensions: 1436005
Number of successful extensions: 5444
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 5125
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5427
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4545742239
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result