| Clone Name | bags13e04 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY846823.1| Triticum aestivum ribosomal protein L13a mRNA, complete cds Length = 666 Score = 456 bits (230), Expect = e-125 Identities = 428/493 (86%), Gaps = 1/493 (0%) Strand = Plus / Plus Query: 10 cgtggtggtggttcggtgcgaggnagatgtgcatctccggcgggctggtccgtcagaaga 69 |||||||||||| || ||||||| |||| ||||| |||||||| || ||||| ||||||| Sbjct: 129 cgtggtggtggtccgctgcgagg-agatctgcatgtccggcggcctcgtccgccagaaga 187 Query: 70 tgaagtacctccgcttcctccgcaagcggatgaacaccaagccgtcgcacggtcccatcc 129 ||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||| Sbjct: 188 tgaagtacctccgcttcctccgcaagcggatgaacaccaagccctcccacggccccatcc 247 Query: 130 acttccgcgccccctcgaaaattttctggcgcaccgtgcgcggcatgatcccgcacaaga 189 ||||||||||||| | || || ||||||||||| | ||||| ||||| |||||||||| Sbjct: 248 acttccgcgccccggccaagatcctctggcgcaccatccgcggtatgattccgcacaaga 307 Query: 190 cgccccgcggcgaggctgcgctcgccaggctgaaggcgttcgagggcgtcccgccgcctt 249 | | | |||||||| |||||||||||||| ||||||| |||||||||||||||||| | Sbjct: 308 ccgcgaggggcgaggccgcgctcgccaggctcaaggcgtacgagggcgtcccgccgccgt 367 Query: 250 atgatcgcaccaagcgtatggtcatccccgacgcgctcaaggttctgaggctgcagccgg 309 | || | |||||||| ||||||||||||||||||||||||||||||||||||||||| | Sbjct: 368 acgacaggaccaagcgcatggtcatccccgacgcgctcaaggttctgaggctgcagcctg 427 Query: 310 gtcataagtactgccttcncggcgagctttccaaggaggtcgggtggaactaccatgaaa 369 | || | ||||||||| | |||| |||| |||||||||||||| ||||||||| || | Sbjct: 428 ggcacaggtactgcctcctcggccagctctccaaggaggtcggatggaactacgccgaca 487 Query: 370 ctatcaaggaactggaggagaagaggaaggagaaggccaaggtctcttacgacaggagga 429 | |||| ||| |||||||| ||||| |||||||||||||||||||| ||||||||||| | Sbjct: 488 ccatcagggagctggaggaaaagagaaaggagaaggccaaggtctcctacgacaggagaa 547 Query: 430 agcaactggccaagctgcgcgtcaaggctgagaaggctgcagaggagaagctgggttctc 489 |||||||||| ||||| ||||||||||| |||||||| || ||||||||| |||| ||| Sbjct: 548 agcaactggcgaagctccgcgtcaaggccgagaaggcggccgaggagaagttgggaactc 607 Query: 490 agttggacatcct 502 || |||| ||||| Sbjct: 608 agctggagatcct 620
>ref|XM_469814.1| Oryza sativa (japonica cultivar-group), mRNA Length = 935 Score = 452 bits (228), Expect = e-124 Identities = 423/487 (86%), Gaps = 1/487 (0%) Strand = Plus / Plus Query: 10 cgtggtggtggttcggtgcgaggnagatgtgcatctccggcgggctggtccgtcagaaga 69 ||||||||| || || ||||||| |||| ||||| |||||||| || ||||| ||||||| Sbjct: 184 cgtggtggtcgtccgctgcgagg-agatctgcatgtccggcggcctcgtccgccagaaga 242 Query: 70 tgaagtacctccgcttcctccgcaagcggatgaacaccaagccgtcgcacggtcccatcc 129 |||||||||||||||||||||||||| |||||||||||||||| || || || ||||||| Sbjct: 243 tgaagtacctccgcttcctccgcaagaggatgaacaccaagccctcccatggccccatcc 302 Query: 130 acttccgcgccccctcgaaaattttctggcgcaccgtgcgcggcatgatcccgcacaaga 189 |||||||| ||||| | || || ||||||||||||| |||||||||||||||||||||| Sbjct: 303 acttccgctcccccgccaagatcctctggcgcaccgtccgcggcatgatcccgcacaaga 362 Query: 190 cgccccgcggcgaggctgcgctcgccaggctgaaggcgttcgagggcgtcccgccgcctt 249 | | || ||||| ||||| || ||||||||||||| ||||||||| |||||||| | Sbjct: 363 ccaagaggggagaggcggcgctggcaaggctgaaggcgtacgagggcgtgccgccgccgt 422 Query: 250 atgatcgcaccaagcgtatggtcatccccgacgcgctcaaggttctgaggctgcagccgg 309 | || | |||||||| ||||||||||||||||||||||||||||||||||||||||| | Sbjct: 423 acgacaggaccaagcgcatggtcatccccgacgcgctcaaggttctgaggctgcagcctg 482 Query: 310 gtcataagtactgccttcncggcgagctttccaaggaggtcgggtggaactaccatgaaa 369 | || ||||||||||| | |||| |||| ||||||||||| || ||||||||| |||| | Sbjct: 483 ggcacaagtactgcctcctcggccagctctccaaggaggttggctggaactactatgaca 542 Query: 370 ctatcaaggaactggaggagaagaggaaggagaaggccaaggtctcttacgacaggagga 429 | |||| ||| || ||||||||||||||||||||||||||||| | || |||||||||| Sbjct: 543 ccatcagggagcttgaggagaagaggaaggagaaggccaaggttgcctatgacaggagga 602 Query: 430 agcaactggccaagctgcgcgtcaaggctgagaaggctgcagaggagaagctgggttctc 489 |||||||||| |||||||| ||||||||||||||||| || ||||||||||||||| ||| Sbjct: 603 agcaactggcgaagctgcgtgtcaaggctgagaaggcagccgaggagaagctgggtcctc 662 Query: 490 agttgga 496 || |||| Sbjct: 663 agctgga 669
>dbj|AK106078.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-A04, full insert sequence Length = 1048 Score = 452 bits (228), Expect = e-124 Identities = 423/487 (86%), Gaps = 1/487 (0%) Strand = Plus / Plus Query: 10 cgtggtggtggttcggtgcgaggnagatgtgcatctccggcgggctggtccgtcagaaga 69 ||||||||| || || ||||||| |||| ||||| |||||||| || ||||| ||||||| Sbjct: 194 cgtggtggtcgtccgctgcgagg-agatctgcatgtccggcggcctcgtccgccagaaga 252 Query: 70 tgaagtacctccgcttcctccgcaagcggatgaacaccaagccgtcgcacggtcccatcc 129 |||||||||||||||||||||||||| |||||||||||||||| || || || ||||||| Sbjct: 253 tgaagtacctccgcttcctccgcaagaggatgaacaccaagccctcccatggccccatcc 312 Query: 130 acttccgcgccccctcgaaaattttctggcgcaccgtgcgcggcatgatcccgcacaaga 189 |||||||| ||||| | || || ||||||||||||| |||||||||||||||||||||| Sbjct: 313 acttccgctcccccgccaagatcctctggcgcaccgtccgcggcatgatcccgcacaaga 372 Query: 190 cgccccgcggcgaggctgcgctcgccaggctgaaggcgttcgagggcgtcccgccgcctt 249 | | || ||||| ||||| || ||||||||||||| ||||||||| |||||||| | Sbjct: 373 ccaagaggggagaggcggcgctggcaaggctgaaggcgtacgagggcgtgccgccgccgt 432 Query: 250 atgatcgcaccaagcgtatggtcatccccgacgcgctcaaggttctgaggctgcagccgg 309 | || | |||||||| ||||||||||||||||||||||||||||||||||||||||| | Sbjct: 433 acgacaggaccaagcgcatggtcatccccgacgcgctcaaggttctgaggctgcagcctg 492 Query: 310 gtcataagtactgccttcncggcgagctttccaaggaggtcgggtggaactaccatgaaa 369 | || ||||||||||| | |||| |||| ||||||||||| || ||||||||| |||| | Sbjct: 493 ggcacaagtactgcctcctcggccagctctccaaggaggttggctggaactactatgaca 552 Query: 370 ctatcaaggaactggaggagaagaggaaggagaaggccaaggtctcttacgacaggagga 429 | |||| ||| || ||||||||||||||||||||||||||||| | || |||||||||| Sbjct: 553 ccatcagggagcttgaggagaagaggaaggagaaggccaaggttgcctatgacaggagga 612 Query: 430 agcaactggccaagctgcgcgtcaaggctgagaaggctgcagaggagaagctgggttctc 489 |||||||||| |||||||| ||||||||||||||||| || ||||||||||||||| ||| Sbjct: 613 agcaactggcgaagctgcgtgtcaaggctgagaaggcagccgaggagaagctgggtcctc 672 Query: 490 agttgga 496 || |||| Sbjct: 673 agctgga 679
>dbj|AK103893.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033150E09, full insert sequence Length = 943 Score = 452 bits (228), Expect = e-124 Identities = 423/487 (86%), Gaps = 1/487 (0%) Strand = Plus / Plus Query: 10 cgtggtggtggttcggtgcgaggnagatgtgcatctccggcgggctggtccgtcagaaga 69 ||||||||| || || ||||||| |||| ||||| |||||||| || ||||| ||||||| Sbjct: 194 cgtggtggtcgtccgctgcgagg-agatctgcatgtccggcggcctcgtccgccagaaga 252 Query: 70 tgaagtacctccgcttcctccgcaagcggatgaacaccaagccgtcgcacggtcccatcc 129 |||||||||||||||||||||||||| |||||||||||||||| || || || ||||||| Sbjct: 253 tgaagtacctccgcttcctccgcaagaggatgaacaccaagccctcccatggccccatcc 312 Query: 130 acttccgcgccccctcgaaaattttctggcgcaccgtgcgcggcatgatcccgcacaaga 189 |||||||| ||||| | || || ||||||||||||| |||||||||||||||||||||| Sbjct: 313 acttccgctcccccgccaagatcctctggcgcaccgtccgcggcatgatcccgcacaaga 372 Query: 190 cgccccgcggcgaggctgcgctcgccaggctgaaggcgttcgagggcgtcccgccgcctt 249 | | || ||||| ||||| || ||||||||||||| ||||||||| |||||||| | Sbjct: 373 ccaagaggggagaggcggcgctggcaaggctgaaggcgtacgagggcgtgccgccgccgt 432 Query: 250 atgatcgcaccaagcgtatggtcatccccgacgcgctcaaggttctgaggctgcagccgg 309 | || | |||||||| ||||||||||||||||||||||||||||||||||||||||| | Sbjct: 433 acgacaggaccaagcgcatggtcatccccgacgcgctcaaggttctgaggctgcagcctg 492 Query: 310 gtcataagtactgccttcncggcgagctttccaaggaggtcgggtggaactaccatgaaa 369 | || ||||||||||| | |||| |||| ||||||||||| || ||||||||| |||| | Sbjct: 493 ggcacaagtactgcctcctcggccagctctccaaggaggttggctggaactactatgaca 552 Query: 370 ctatcaaggaactggaggagaagaggaaggagaaggccaaggtctcttacgacaggagga 429 | |||| ||| || ||||||||||||||||||||||||||||| | || |||||||||| Sbjct: 553 ccatcagggagcttgaggagaagaggaaggagaaggccaaggttgcctatgacaggagga 612 Query: 430 agcaactggccaagctgcgcgtcaaggctgagaaggctgcagaggagaagctgggttctc 489 |||||||||| |||||||| ||||||||||||||||| || ||||||||||||||| ||| Sbjct: 613 agcaactggcgaagctgcgtgtcaaggctgagaaggcagccgaggagaagctgggtcctc 672 Query: 490 agttgga 496 || |||| Sbjct: 673 agctgga 679
>ref|XM_476399.1| Oryza sativa (japonica cultivar-group), mRNA Length = 859 Score = 440 bits (222), Expect = e-120 Identities = 417/481 (86%), Gaps = 1/481 (0%) Strand = Plus / Plus Query: 11 gtggtggtggttcggtgcgaggnagatgtgcatctccggcgggctggtccgtcagaagat 70 ||||||||||| |||||||||| |||||||||||||||||||||| ||||| |||||||| Sbjct: 196 gtggtggtggtgcggtgcgagg-agatgtgcatctccggcgggctcgtccggcagaagat 254 Query: 71 gaagtacctccgcttcctccgcaagcggatgaacaccaagccgtcgcacggtcccatcca 130 |||||||||||| ||||||||||||||||||||||||||||| || || || |||||||| Sbjct: 255 gaagtacctccggttcctccgcaagcggatgaacaccaagccctcccatggccccatcca 314 Query: 131 cttccgcgccccctcgaaaattttctggcgcaccgtgcgcggcatgatcccgcacaagac 190 ||||||||||||||| || |||||||||||||| |||||||||||||| |||||||| Sbjct: 315 cttccgcgccccctcccgcatcttctggcgcaccgtccgcggcatgatcccccacaagac 374 Query: 191 gccccgcggcgaggctgcgctcgccaggctgaaggcgttcgagggcgtcccgccgcctta 250 |||||||||||||| || ||||||| || ||||| ||||| |||||||| || || || Sbjct: 375 cccccgcggcgaggccgccctcgccaacctcaaggccttcgacggcgtcccccctcccta 434 Query: 251 tgatcgcaccaagcgtatggtcatccccgacgcgctcaaggttctgaggctgcagccggg 310 || ||||||||||| |||||| |||||||||| ||||||||||| | || ||||| || Sbjct: 435 cgaccgcaccaagcgcatggtcgtccccgacgccctcaaggttcttcgcctccagcccgg 494 Query: 311 tcataagtactgccttcncggcgagctttccaaggaggtcgggtggaactaccatgaaac 370 || ||||||||||| | |||| |||| |||||||||||||| ||||||||||| || || Sbjct: 495 ccacaagtactgcctcctcggccagctctccaaggaggtcggctggaactaccacgacac 554 Query: 371 tatcaaggaactggaggagaagaggaaggagaaggccaaggtctcttacgacaggaggaa 430 |||| |||| ||||||||||||| ||||||||||| ||||| | ||||| |||||||| Sbjct: 555 catcagggaattggaggagaagagaaaggagaaggctaaggttgcatacgagaggaggaa 614 Query: 431 gcaactggccaagctgcgcgtcaaggctgagaaggctgcagaggagaagctgggttctca 490 |||| | | | ||| || |||||||||||||| ||||| |||||||||||||||||||| Sbjct: 615 gcaattaacaaggcttcgtgtcaaggctgagaaagctgctgaggagaagctgggttctca 674 Query: 491 g 491 | Sbjct: 675 g 675
>ref|XM_506141.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1567_G09.119 mRNA Length = 863 Score = 440 bits (222), Expect = e-120 Identities = 417/481 (86%), Gaps = 1/481 (0%) Strand = Plus / Plus Query: 11 gtggtggtggttcggtgcgaggnagatgtgcatctccggcgggctggtccgtcagaagat 70 ||||||||||| |||||||||| |||||||||||||||||||||| ||||| |||||||| Sbjct: 200 gtggtggtggtgcggtgcgagg-agatgtgcatctccggcgggctcgtccggcagaagat 258 Query: 71 gaagtacctccgcttcctccgcaagcggatgaacaccaagccgtcgcacggtcccatcca 130 |||||||||||| ||||||||||||||||||||||||||||| || || || |||||||| Sbjct: 259 gaagtacctccggttcctccgcaagcggatgaacaccaagccctcccatggccccatcca 318 Query: 131 cttccgcgccccctcgaaaattttctggcgcaccgtgcgcggcatgatcccgcacaagac 190 ||||||||||||||| || |||||||||||||| |||||||||||||| |||||||| Sbjct: 319 cttccgcgccccctcccgcatcttctggcgcaccgtccgcggcatgatcccccacaagac 378 Query: 191 gccccgcggcgaggctgcgctcgccaggctgaaggcgttcgagggcgtcccgccgcctta 250 |||||||||||||| || ||||||| || ||||| ||||| |||||||| || || || Sbjct: 379 cccccgcggcgaggccgccctcgccaacctcaaggccttcgacggcgtcccccctcccta 438 Query: 251 tgatcgcaccaagcgtatggtcatccccgacgcgctcaaggttctgaggctgcagccggg 310 || ||||||||||| |||||| |||||||||| ||||||||||| | || ||||| || Sbjct: 439 cgaccgcaccaagcgcatggtcgtccccgacgccctcaaggttcttcgcctccagcccgg 498 Query: 311 tcataagtactgccttcncggcgagctttccaaggaggtcgggtggaactaccatgaaac 370 || ||||||||||| | |||| |||| |||||||||||||| ||||||||||| || || Sbjct: 499 ccacaagtactgcctcctcggccagctctccaaggaggtcggctggaactaccacgacac 558 Query: 371 tatcaaggaactggaggagaagaggaaggagaaggccaaggtctcttacgacaggaggaa 430 |||| |||| ||||||||||||| ||||||||||| ||||| | ||||| |||||||| Sbjct: 559 catcagggaattggaggagaagagaaaggagaaggctaaggttgcatacgagaggaggaa 618 Query: 431 gcaactggccaagctgcgcgtcaaggctgagaaggctgcagaggagaagctgggttctca 490 |||| | | | ||| || |||||||||||||| ||||| |||||||||||||||||||| Sbjct: 619 gcaattaacaaggcttcgtgtcaaggctgagaaagctgctgaggagaagctgggttctca 678 Query: 491 g 491 | Sbjct: 679 g 679
>dbj|AK103048.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033117G12, full insert sequence Length = 859 Score = 440 bits (222), Expect = e-120 Identities = 417/481 (86%), Gaps = 1/481 (0%) Strand = Plus / Plus Query: 11 gtggtggtggttcggtgcgaggnagatgtgcatctccggcgggctggtccgtcagaagat 70 ||||||||||| |||||||||| |||||||||||||||||||||| ||||| |||||||| Sbjct: 196 gtggtggtggtgcggtgcgagg-agatgtgcatctccggcgggctcgtccggcagaagat 254 Query: 71 gaagtacctccgcttcctccgcaagcggatgaacaccaagccgtcgcacggtcccatcca 130 |||||||||||| ||||||||||||||||||||||||||||| || || || |||||||| Sbjct: 255 gaagtacctccggttcctccgcaagcggatgaacaccaagccctcccatggccccatcca 314 Query: 131 cttccgcgccccctcgaaaattttctggcgcaccgtgcgcggcatgatcccgcacaagac 190 ||||||||||||||| || |||||||||||||| |||||||||||||| |||||||| Sbjct: 315 cttccgcgccccctcccgcatcttctggcgcaccgtccgcggcatgatcccccacaagac 374 Query: 191 gccccgcggcgaggctgcgctcgccaggctgaaggcgttcgagggcgtcccgccgcctta 250 |||||||||||||| || ||||||| || ||||| ||||| |||||||| || || || Sbjct: 375 cccccgcggcgaggccgccctcgccaacctcaaggccttcgacggcgtcccccctcccta 434 Query: 251 tgatcgcaccaagcgtatggtcatccccgacgcgctcaaggttctgaggctgcagccggg 310 || ||||||||||| |||||| |||||||||| ||||||||||| | || ||||| || Sbjct: 435 cgaccgcaccaagcgcatggtcgtccccgacgccctcaaggttcttcgcctccagcccgg 494 Query: 311 tcataagtactgccttcncggcgagctttccaaggaggtcgggtggaactaccatgaaac 370 || ||||||||||| | |||| |||| |||||||||||||| ||||||||||| || || Sbjct: 495 ccacaagtactgcctcctcggccagctctccaaggaggtcggctggaactaccacgacac 554 Query: 371 tatcaaggaactggaggagaagaggaaggagaaggccaaggtctcttacgacaggaggaa 430 |||| |||| ||||||||||||| ||||||||||| ||||| | ||||| |||||||| Sbjct: 555 catcagggaattggaggagaagagaaaggagaaggctaaggttgcatacgagaggaggaa 614 Query: 431 gcaactggccaagctgcgcgtcaaggctgagaaggctgcagaggagaagctgggttctca 490 |||| | | | ||| || |||||||||||||| ||||| |||||||||||||||||||| Sbjct: 615 gcaattaacaaggcttcgtgtcaaggctgagaaagctgctgaggagaagctgggttctca 674 Query: 491 g 491 | Sbjct: 675 g 675
>dbj|AK063806.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-G03, full insert sequence Length = 863 Score = 440 bits (222), Expect = e-120 Identities = 417/481 (86%), Gaps = 1/481 (0%) Strand = Plus / Plus Query: 11 gtggtggtggttcggtgcgaggnagatgtgcatctccggcgggctggtccgtcagaagat 70 ||||||||||| |||||||||| |||||||||||||||||||||| ||||| |||||||| Sbjct: 200 gtggtggtggtgcggtgcgagg-agatgtgcatctccggcgggctcgtccggcagaagat 258 Query: 71 gaagtacctccgcttcctccgcaagcggatgaacaccaagccgtcgcacggtcccatcca 130 |||||||||||| ||||||||||||||||||||||||||||| || || || |||||||| Sbjct: 259 gaagtacctccggttcctccgcaagcggatgaacaccaagccctcccatggccccatcca 318 Query: 131 cttccgcgccccctcgaaaattttctggcgcaccgtgcgcggcatgatcccgcacaagac 190 ||||||||||||||| || |||||||||||||| |||||||||||||| |||||||| Sbjct: 319 cttccgcgccccctcccgcatcttctggcgcaccgtccgcggcatgatcccccacaagac 378 Query: 191 gccccgcggcgaggctgcgctcgccaggctgaaggcgttcgagggcgtcccgccgcctta 250 |||||||||||||| || ||||||| || ||||| ||||| |||||||| || || || Sbjct: 379 cccccgcggcgaggccgccctcgccaacctcaaggccttcgacggcgtcccccctcccta 438 Query: 251 tgatcgcaccaagcgtatggtcatccccgacgcgctcaaggttctgaggctgcagccggg 310 || ||||||||||| |||||| |||||||||| ||||||||||| | || ||||| || Sbjct: 439 cgaccgcaccaagcgcatggtcgtccccgacgccctcaaggttcttcgcctccagcccgg 498 Query: 311 tcataagtactgccttcncggcgagctttccaaggaggtcgggtggaactaccatgaaac 370 || ||||||||||| | |||| |||| |||||||||||||| ||||||||||| || || Sbjct: 499 ccacaagtactgcctcctcggccagctctccaaggaggtcggctggaactaccacgacac 558 Query: 371 tatcaaggaactggaggagaagaggaaggagaaggccaaggtctcttacgacaggaggaa 430 |||| |||| ||||||||||||| ||||||||||| ||||| | ||||| |||||||| Sbjct: 559 catcagggaattggaggagaagagaaaggagaaggctaaggttgcatacgagaggaggaa 618 Query: 431 gcaactggccaagctgcgcgtcaaggctgagaaggctgcagaggagaagctgggttctca 490 |||| | | | ||| || |||||||||||||| ||||| |||||||||||||||||||| Sbjct: 619 gcaattaacaaggcttcgtgtcaaggctgagaaagctgctgaggagaagctgggttctca 678 Query: 491 g 491 | Sbjct: 679 g 679
>gb|BT016389.1| Zea mays clone Contig222 mRNA sequence Length = 880 Score = 412 bits (208), Expect = e-112 Identities = 399/463 (86%) Strand = Plus / Plus Query: 34 agatgtgcatctccggcgggctggtccgtcagaagatgaagtacctccgcttcctccgca 93 |||| ||||| || ||||| || ||||||||||||||||||||||||||||||||||||| Sbjct: 193 agatctgcatgtcgggcggcctcgtccgtcagaagatgaagtacctccgcttcctccgca 252 Query: 94 agcggatgaacaccaagccgtcgcacggtcccatccacttccgcgccccctcgaaaattt 153 |||||||||||||||||||||| ||||| ||||||||||||||||||||| | || || Sbjct: 253 agcggatgaacaccaagccgtcccacgggcccatccacttccgcgcccccgccaagatcc 312 Query: 154 tctggcgcaccgtgcgcggcatgatcccgcacaagacgccccgcggcgaggctgcgctcg 213 | ||||||||| | ||||| ||||| ||||||||||| | || ||||| || || | Sbjct: 313 tgtggcgcaccatccgcgggatgattccgcacaagaccaagaggggggaggcggctctgg 372 Query: 214 ccaggctgaaggcgttcgagggcgtcccgccgccttatgatcgcaccaagcgtatggtca 273 | ||||| ||| ||| |||||||||||||||||| || || |||||||||||||||| Sbjct: 373 cgaggctcaagacgtacgagggcgtcccgccgccgtacgacaagaccaagcgtatggtca 432 Query: 274 tccccgacgcgctcaaggttctgaggctgcagccgggtcataagtactgccttcncggcg 333 |||| ||||| || |||||||||||||| ||||| || || ||||||||||| | ||||| Sbjct: 433 tccctgacgctcttaaggttctgaggctacagcctggacacaagtactgcctcctcggcg 492 Query: 334 agctttccaaggaggtcgggtggaactaccatgaaactatcaaggaactggaggagaaga 393 |||| || |||||||||||||||||||||||||| || |||| |||||| |||||||||| Sbjct: 493 agctctctaaggaggtcgggtggaactaccatgacaccatcagggaacttgaggagaaga 552 Query: 394 ggaaggagaaggccaaggtctcttacgacaggaggaagcaactggccaagctgcgcgtca 453 ||||||||||||||||||| | ||||| |||| ||||||| ||||||||||||| |||| Sbjct: 553 ggaaggagaaggccaaggttgcctacgagaggaagaagcaattggccaagctgcgtgtca 612 Query: 454 aggctgagaaggctgcagaggagaagctgggttctcagttgga 496 |||| |||||||| || ||||||||| |||| ||||||||||| Sbjct: 613 aggccgagaaggcagccgaggagaagttggggtctcagttgga 655
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 293 bits (148), Expect = 3e-76 Identities = 248/280 (88%), Gaps = 1/280 (0%) Strand = Plus / Minus Query: 11 gtggtggtggttcggtgcgaggnagatgtgcatctccggcgggctggtccgtcagaagat 70 ||||||||||| |||||||||| |||||||||||||||||||||| ||||| |||||||| Sbjct: 524566 gtggtggtggtgcggtgcgagg-agatgtgcatctccggcgggctcgtccggcagaagat 524508 Query: 71 gaagtacctccgcttcctccgcaagcggatgaacaccaagccgtcgcacggtcccatcca 130 |||||||||||| ||||||||||||||||||||||||||||| || || || |||||||| Sbjct: 524507 gaagtacctccggttcctccgcaagcggatgaacaccaagccctcccatggccccatcca 524448 Query: 131 cttccgcgccccctcgaaaattttctggcgcaccgtgcgcggcatgatcccgcacaagac 190 ||||||||||||||| || |||||||||||||| |||||||||||||| |||||||| Sbjct: 524447 cttccgcgccccctcccgcatcttctggcgcaccgtccgcggcatgatcccccacaagac 524388 Query: 191 gccccgcggcgaggctgcgctcgccaggctgaaggcgttcgagggcgtcccgccgcctta 250 |||||||||||||| || ||||||| || ||||| ||||| |||||||| || || || Sbjct: 524387 cccccgcggcgaggccgccctcgccaacctcaaggccttcgacggcgtcccccctcccta 524328 Query: 251 tgatcgcaccaagcgtatggtcatccccgacgcgctcaag 290 || ||||||||||| |||||| |||||||||| |||||| Sbjct: 524327 cgaccgcaccaagcgcatggtcgtccccgacgccctcaag 524288 Score = 103 bits (52), Expect = 6e-19 Identities = 100/116 (86%) Strand = Plus / Minus Query: 376 aggaactggaggagaagaggaaggagaaggccaaggtctcttacgacaggaggaagcaac 435 ||||| ||||||||||||| ||||||||||| ||||| | ||||| |||||||||||| Sbjct: 523065 aggaattggaggagaagagaaaggagaaggctaaggttgcatacgagaggaggaagcaat 523006 Query: 436 tggccaagctgcgcgtcaaggctgagaaggctgcagaggagaagctgggttctcag 491 | | | ||| || |||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 523005 taacaaggcttcgtgtcaaggctgagaaagctgctgaggagaagctgggttctcag 522950 Score = 61.9 bits (31), Expect = 2e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 315 aagtactgccttcncggcgagctttccaaggaggtcgggtggaactacca 364 ||||||||||| | |||| |||| |||||||||||||| ||||||||||| Sbjct: 524187 aagtactgcctcctcggccagctctccaaggaggtcggctggaactacca 524138
>dbj|AP004342.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0585H11 Length = 149371 Score = 293 bits (148), Expect = 3e-76 Identities = 248/280 (88%), Gaps = 1/280 (0%) Strand = Plus / Minus Query: 11 gtggtggtggttcggtgcgaggnagatgtgcatctccggcgggctggtccgtcagaagat 70 ||||||||||| |||||||||| |||||||||||||||||||||| ||||| |||||||| Sbjct: 126730 gtggtggtggtgcggtgcgagg-agatgtgcatctccggcgggctcgtccggcagaagat 126672 Query: 71 gaagtacctccgcttcctccgcaagcggatgaacaccaagccgtcgcacggtcccatcca 130 |||||||||||| ||||||||||||||||||||||||||||| || || || |||||||| Sbjct: 126671 gaagtacctccggttcctccgcaagcggatgaacaccaagccctcccatggccccatcca 126612 Query: 131 cttccgcgccccctcgaaaattttctggcgcaccgtgcgcggcatgatcccgcacaagac 190 ||||||||||||||| || |||||||||||||| |||||||||||||| |||||||| Sbjct: 126611 cttccgcgccccctcccgcatcttctggcgcaccgtccgcggcatgatcccccacaagac 126552 Query: 191 gccccgcggcgaggctgcgctcgccaggctgaaggcgttcgagggcgtcccgccgcctta 250 |||||||||||||| || ||||||| || ||||| ||||| |||||||| || || || Sbjct: 126551 cccccgcggcgaggccgccctcgccaacctcaaggccttcgacggcgtcccccctcccta 126492 Query: 251 tgatcgcaccaagcgtatggtcatccccgacgcgctcaag 290 || ||||||||||| |||||| |||||||||| |||||| Sbjct: 126491 cgaccgcaccaagcgcatggtcgtccccgacgccctcaag 126452 Score = 103 bits (52), Expect = 6e-19 Identities = 100/116 (86%) Strand = Plus / Minus Query: 376 aggaactggaggagaagaggaaggagaaggccaaggtctcttacgacaggaggaagcaac 435 ||||| ||||||||||||| ||||||||||| ||||| | ||||| |||||||||||| Sbjct: 125229 aggaattggaggagaagagaaaggagaaggctaaggttgcatacgagaggaggaagcaat 125170 Query: 436 tggccaagctgcgcgtcaaggctgagaaggctgcagaggagaagctgggttctcag 491 | | | ||| || |||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 125169 taacaaggcttcgtgtcaaggctgagaaagctgctgaggagaagctgggttctcag 125114 Score = 61.9 bits (31), Expect = 2e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 315 aagtactgccttcncggcgagctttccaaggaggtcgggtggaactacca 364 ||||||||||| | |||| |||| |||||||||||||| ||||||||||| Sbjct: 126351 aagtactgcctcctcggccagctctccaaggaggtcggctggaactacca 126302
>dbj|AP003759.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1567_G09 Length = 121388 Score = 293 bits (148), Expect = 3e-76 Identities = 248/280 (88%), Gaps = 1/280 (0%) Strand = Plus / Minus Query: 11 gtggtggtggttcggtgcgaggnagatgtgcatctccggcgggctggtccgtcagaagat 70 ||||||||||| |||||||||| |||||||||||||||||||||| ||||| |||||||| Sbjct: 78478 gtggtggtggtgcggtgcgagg-agatgtgcatctccggcgggctcgtccggcagaagat 78420 Query: 71 gaagtacctccgcttcctccgcaagcggatgaacaccaagccgtcgcacggtcccatcca 130 |||||||||||| ||||||||||||||||||||||||||||| || || || |||||||| Sbjct: 78419 gaagtacctccggttcctccgcaagcggatgaacaccaagccctcccatggccccatcca 78360 Query: 131 cttccgcgccccctcgaaaattttctggcgcaccgtgcgcggcatgatcccgcacaagac 190 ||||||||||||||| || |||||||||||||| |||||||||||||| |||||||| Sbjct: 78359 cttccgcgccccctcccgcatcttctggcgcaccgtccgcggcatgatcccccacaagac 78300 Query: 191 gccccgcggcgaggctgcgctcgccaggctgaaggcgttcgagggcgtcccgccgcctta 250 |||||||||||||| || ||||||| || ||||| ||||| |||||||| || || || Sbjct: 78299 cccccgcggcgaggccgccctcgccaacctcaaggccttcgacggcgtcccccctcccta 78240 Query: 251 tgatcgcaccaagcgtatggtcatccccgacgcgctcaag 290 || ||||||||||| |||||| |||||||||| |||||| Sbjct: 78239 cgaccgcaccaagcgcatggtcgtccccgacgccctcaag 78200 Score = 103 bits (52), Expect = 6e-19 Identities = 100/116 (86%) Strand = Plus / Minus Query: 376 aggaactggaggagaagaggaaggagaaggccaaggtctcttacgacaggaggaagcaac 435 ||||| ||||||||||||| ||||||||||| ||||| | ||||| |||||||||||| Sbjct: 76977 aggaattggaggagaagagaaaggagaaggctaaggttgcatacgagaggaggaagcaat 76918 Query: 436 tggccaagctgcgcgtcaaggctgagaaggctgcagaggagaagctgggttctcag 491 | | | ||| || |||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 76917 taacaaggcttcgtgtcaaggctgagaaagctgctgaggagaagctgggttctcag 76862 Score = 61.9 bits (31), Expect = 2e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 315 aagtactgccttcncggcgagctttccaaggaggtcgggtggaactacca 364 ||||||||||| | |||| |||| |||||||||||||| ||||||||||| Sbjct: 78099 aagtactgcctcctcggccagctctccaaggaggtcggctggaactacca 78050
>gb|BT017778.1| Zea mays clone EL01N0503C05.c mRNA sequence Length = 826 Score = 285 bits (144), Expect = 8e-74 Identities = 335/399 (83%) Strand = Plus / Plus Query: 63 cagaagatgaagtacctccgcttcctccgcaagcggatgaacaccaagccgtcgcacggt 122 ||||||||||||||||||||||| |||||||||||||||||||||||||| || || || Sbjct: 211 cagaagatgaagtacctccgctttctccgcaagcggatgaacaccaagccatcccatggg 270 Query: 123 cccatccacttccgcgccccctcgaaaattttctggcgcaccgtgcgcggcatgatcccg 182 |||||||||||||||||||| || || || | ||||||||| | ||||| ||||| ||| Sbjct: 271 cccatccacttccgcgccccgtccaagatcctgtggcgcaccatccgcgggatgattccg 330 Query: 183 cacaagacgccccgcggcgaggctgcgctcgccaggctgaaggcgttcgagggcgtcccg 242 |||||||| | || ||||| || || || ||||| ||| ||| ||||||||||||| Sbjct: 331 cacaagaccaagaggggggaggcggctctggcgaggctcaagacgtacgagggcgtcccg 390 Query: 243 ccgccttatgatcgcaccaagcgtatggtcatccccgacgcgctcaaggttctgaggctg 302 ||||| || || |||||||| |||||||||| ||||| || ||||||||||||||| Sbjct: 391 ccgccgtacgacaagaccaagcgcctggtcatccctgacgctcttaaggttctgaggctg 450 Query: 303 cagccgggtcataagtactgccttcncggcgagctttccaaggaggtcgggtggaactac 362 || || || || ||||||||||| | || |||||||| ||||||||||| ||||||||| Sbjct: 451 caaccaggacacaagtactgcctccttggggagctttctaaggaggtcggatggaactac 510 Query: 363 catgaaactatcaaggaactggaggagaagaggaaggagaaggccaaggtctcttacgac 422 ||||| || |||| ||| || ||||||||||||||||||||||| ||||| | || || Sbjct: 511 catgacaccatcagggagcttgaggagaagaggaaggagaaggctaaggtggcctatgag 570 Query: 423 aggaggaagcaactggccaagctgcgcgtcaaggctgag 461 ||||||||||| ||||||||||||||| | ||||||||| Sbjct: 571 aggaggaagcagctggccaagctgcgcctaaaggctgag 609
>ref|XM_469811.1| Oryza sativa (japonica cultivar-group), mRNA Length = 947 Score = 214 bits (108), Expect = 2e-52 Identities = 230/271 (84%) Strand = Plus / Plus Query: 97 ggatgaacaccaagccgtcgcacggtcccatccacttccgcgccccctcgaaaattttct 156 |||||||||||||||| || || || ||||||||||||||| ||||| | || || ||| Sbjct: 119 ggatgaacaccaagccctcccatggccccatccacttccgctcccccgccaagatcctct 178 Query: 157 ggcgcaccgtgcgcggcatgatcccgcacaagacgccccgcggcgaggctgcgctcgcca 216 |||||||||| ||||||||||||||||||||||| | || ||||| ||||| || | Sbjct: 179 ggcgcaccgtccgcggcatgatcccgcacaagaccaagaggggagaggcggcgctggcaa 238 Query: 217 ggctgaaggcgttcgagggcgtcccgccgccttatgatcgcaccaagcgtatggtcatcc 276 |||||||||||| ||||| ||| ||||||| || || | |||||||| |||||||||| Sbjct: 239 ggctgaaggcgtacgaggtcgtgacgccgccgtacgacaggaccaagcgcatggtcatcc 298 Query: 277 ccgacgcgctcaaggttctgaggctgcagccgggtcataagtactgccttcncggcgagc 336 ||||||||||||||||||||||||||||||| || || ||||||||||| | |||| ||| Sbjct: 299 ccgacgcgctcaaggttctgaggctgcagcctgggcacaagtactgcctcctcggccagc 358 Query: 337 tttccaaggaggtcgggtggaactaccatga 367 | ||||||||||| || ||||||||| |||| Sbjct: 359 tctccaaggaggttggctggaactactatga 389
>gb|AY109365.1| Zea mays CL4861_1 mRNA sequence Length = 1506 Score = 174 bits (88), Expect = 2e-40 Identities = 158/180 (87%), Gaps = 1/180 (0%) Strand = Plus / Plus Query: 11 gtggtggtggttcggtgcgaggnagatgtgcatctccggcgggctggtccgtcagaagat 70 |||||||| || || ||||||| |||| ||||| || ||||| || |||||||||||||| Sbjct: 659 gtggtggtcgtccgctgcgagg-agatctgcatgtcgggcggcctcgtccgtcagaagat 717 Query: 71 gaagtacctccgcttcctccgcaagcggatgaacaccaagccgtcgcacggtcccatcca 130 ||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 718 gaagtacctccgcttcctccgcaagcggatgaacaccaagccgtcccacggccccatcca 777 Query: 131 cttccgcgccccctcgaaaattttctggcgcaccgtgcgcggcatgatcccgcacaagac 190 |||||||||||| | || || | ||||||||| | ||||| ||||| ||||||||||| Sbjct: 778 cttccgcgccccggccaagatcctgtggcgcaccatccgcgggatgattccgcacaagac 837 Score = 149 bits (75), Expect = 1e-32 Identities = 143/166 (86%) Strand = Plus / Plus Query: 216 aggctgaaggcgttcgagggcgtcccgccgccttatgatcgcaccaagcgtatggtcatc 275 ||||| ||| ||| |||||||||||||||||| || || |||||||||||||||||| Sbjct: 863 aggctcaagacgtacgagggcgtcccgccgccgtacgacaagaccaagcgtatggtcatc 922 Query: 276 cccgacgcgctcaaggttctgaggctgcagccgggtcataagtactgccttcncggcgag 335 || ||||| || |||||||||||||| ||||| || || ||||||||||| | ||||||| Sbjct: 923 cctgacgctcttaaggttctgaggctacagcctggacacaagtactgcctcctcggcgag 982 Query: 336 ctttccaaggaggtcgggtggaactaccatgaaactatcaaggaac 381 || || |||||||||||||||||||||||||| || |||| ||||| Sbjct: 983 ctctctaaggaggtcgggtggaactaccatgacaccatcagggaac 1028 Score = 87.7 bits (44), Expect = 4e-14 Identities = 71/80 (88%) Strand = Plus / Plus Query: 417 tacgacaggaggaagcaactggccaagctgcgcgtcaaggctgagaaggctgcagaggag 476 ||||| |||| ||||||| ||||||||||||| |||||||| |||||||| || |||||| Sbjct: 1064 tacgagaggaagaagcaattggccaagctgcgtgtcaaggccgagaaggcagccgaggag 1123 Query: 477 aagctgggttctcagttgga 496 ||| |||| ||||||||||| Sbjct: 1124 aagttggggtctcagttgga 1143
>dbj|AK066603.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013071H21, full insert sequence Length = 2212 Score = 165 bits (83), Expect = 2e-37 Identities = 142/162 (87%) Strand = Plus / Plus Query: 201 gaggctgcgctcgccaggctgaaggcgttcgagggcgtcccgccgccttatgatcgcacc 260 ||||| ||||| || ||||||||||||| ||||||||| |||||||| || || | ||| Sbjct: 415 gaggcggcgctggcaaggctgaaggcgtacgagggcgtgccgccgccgtacgacaggacc 474 Query: 261 aagcgtatggtcatccccgacgcgctcaaggttctgaggctgcagccgggtcataagtac 320 ||||| ||||||||||||||||||||||||||||||||||||||||| || || |||||| Sbjct: 475 aagcgcatggtcatccccgacgcgctcaaggttctgaggctgcagcctgggcacaagtac 534 Query: 321 tgccttcncggcgagctttccaaggaggtcgggtggaactac 362 ||||| | |||| |||| ||||||||||| || ||||||||| Sbjct: 535 tgcctcctcggccagctctccaaggaggttggctggaactac 576
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 149 bits (75), Expect = 1e-32 Identities = 142/163 (87%), Gaps = 1/163 (0%) Strand = Plus / Plus Query: 10 cgtggtggtggttcggtgcgaggnagatgtgcatctccggcgggctggtccgtcagaaga 69 ||||||||| || || ||||||| |||| ||||| |||||||| || ||||| ||||||| Sbjct: 30899589 cgtggtggtcgtccgctgcgagg-agatctgcatgtccggcggcctcgtccgccagaaga 30899647 Query: 70 tgaagtacctccgcttcctccgcaagcggatgaacaccaagccgtcgcacggtcccatcc 129 |||||||||||||||||||||||||| |||||||||||||||| || || || ||||||| Sbjct: 30899648 tgaagtacctccgcttcctccgcaagaggatgaacaccaagccctcccatggccccatcc 30899707 Query: 130 acttccgcgccccctcgaaaattttctggcgcaccgtgcgcgg 172 |||||||| ||||| | || || ||||||||||||| ||||| Sbjct: 30899708 acttccgctcccccgccaagatcctctggcgcaccgtccgcgg 30899750 Score = 145 bits (73), Expect = 2e-31 Identities = 103/113 (91%) Strand = Plus / Plus Query: 384 gaggagaagaggaaggagaaggccaaggtctcttacgacaggaggaagcaactggccaag 443 ||||||||||||||||||||||||||||| | || |||||||||||||||||||| ||| Sbjct: 30900988 gaggagaagaggaaggagaaggccaaggttgcctatgacaggaggaagcaactggcgaag 30901047 Query: 444 ctgcgcgtcaaggctgagaaggctgcagaggagaagctgggttctcagttgga 496 ||||| ||||||||||||||||| || ||||||||||||||| ||||| |||| Sbjct: 30901048 ctgcgtgtcaaggctgagaaggcagccgaggagaagctgggtcctcagctgga 30901100 Score = 125 bits (63), Expect = 2e-25 Identities = 121/139 (87%), Gaps = 1/139 (0%) Strand = Plus / Minus Query: 34 agatgtgcatctccggcgggctggtccgtcagaagatgaagtacctccgcttcctccgca 93 |||| ||||| |||||||| || ||||| ||||||||||||||||||||||||||||| | Sbjct: 30886695 agatctgcatgtccggcggcctcgtccgccagaagatgaagtacctccgcttcctccg-a 30886637 Query: 94 agcggatgaacaccaagccgtcgcacggtcccatccacttccgcgccccctcgaaaattt 153 || |||||||||||||||| || || || ||||||||||||||| ||||| | || || Sbjct: 30886636 agaggatgaacaccaagccctcccatggccccatccacttccgctcccccgccaagatcc 30886577 Query: 154 tctggcgcaccgtgcgcgg 172 ||||||||||||| ||||| Sbjct: 30886576 tctggcgcaccgtccgcgg 30886558 Score = 93.7 bits (47), Expect = 6e-16 Identities = 101/119 (84%) Strand = Plus / Plus Query: 172 gcatgatcccgcacaagacgccccgcggcgaggctgcgctcgccaggctgaaggcgttcg 231 ||||||||||||||||||| | || ||||| ||||| || ||||||||||||| || Sbjct: 30899848 gcatgatcccgcacaagaccaagaggggagaggcggcgctggcaaggctgaaggcgtacg 30899907 Query: 232 agggcgtcccgccgccttatgatcgcaccaagcgtatggtcatccccgacgcgctcaag 290 ||||||| |||||||| || || | |||||||| |||||||||||||||||||||||| Sbjct: 30899908 agggcgtgccgccgccgtacgacaggaccaagcgcatggtcatccccgacgcgctcaag 30899966 Score = 77.8 bits (39), Expect = 3e-11 Identities = 68/78 (87%) Strand = Plus / Plus Query: 290 ggttctgaggctgcagccgggtcataagtactgccttcncggcgagctttccaaggaggt 349 |||||||||||||||||| || || ||||||||||| | |||| |||| ||||||||||| Sbjct: 30900058 ggttctgaggctgcagcctgggcacaagtactgcctcctcggccagctctccaaggaggt 30900117 Query: 350 cgggtggaactaccatga 367 || ||||||||| |||| Sbjct: 30900118 tggctggaactactatga 30900135 Score = 77.8 bits (39), Expect = 3e-11 Identities = 99/119 (83%) Strand = Plus / Minus Query: 172 gcatgatcccgcacaagacgccccgcggcgaggctgcgctcgccaggctgaaggcgttcg 231 ||||||||||||||||||| | || ||||| ||||| || ||||||||||||| || Sbjct: 30886444 gcatgatcccgcacaagaccaagaggggagaggcggcgctggcaaggctgaaggcgtacg 30886385 Query: 232 agggcgtcccgccgccttatgatcgcaccaagcgtatggtcatccccgacgcgctcaag 290 ||| ||| ||||||| || || | |||||||| |||||||||||||||||||||||| Sbjct: 30886384 aggtcgtgacgccgccgtacgacaggaccaagcgcatggtcatccccgacgcgctcaag 30886326 Score = 77.8 bits (39), Expect = 3e-11 Identities = 68/78 (87%) Strand = Plus / Minus Query: 290 ggttctgaggctgcagccgggtcataagtactgccttcncggcgagctttccaaggaggt 349 |||||||||||||||||| || || ||||||||||| | |||| |||| ||||||||||| Sbjct: 30886224 ggttctgaggctgcagcctgggcacaagtactgcctcctcggccagctctccaaggaggt 30886165 Query: 350 cgggtggaactaccatga 367 || ||||||||| |||| Sbjct: 30886164 tggctggaactactatga 30886147 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 383 ggaggagaagaggaaggagaaggc 406 ||||||||||||||||| |||||| Sbjct: 34372697 ggaggagaagaggaaggtgaaggc 34372674
>gb|AC120509.3| Oryza sativa chromosome 3 BAC OSJNBb0081K01 genomic sequence, complete sequence Length = 122496 Score = 149 bits (75), Expect = 1e-32 Identities = 142/163 (87%), Gaps = 1/163 (0%) Strand = Plus / Minus Query: 10 cgtggtggtggttcggtgcgaggnagatgtgcatctccggcgggctggtccgtcagaaga 69 ||||||||| || || ||||||| |||| ||||| |||||||| || ||||| ||||||| Sbjct: 43501 cgtggtggtcgtccgctgcgagg-agatctgcatgtccggcggcctcgtccgccagaaga 43443 Query: 70 tgaagtacctccgcttcctccgcaagcggatgaacaccaagccgtcgcacggtcccatcc 129 |||||||||||||||||||||||||| |||||||||||||||| || || || ||||||| Sbjct: 43442 tgaagtacctccgcttcctccgcaagaggatgaacaccaagccctcccatggccccatcc 43383 Query: 130 acttccgcgccccctcgaaaattttctggcgcaccgtgcgcgg 172 |||||||| ||||| | || || ||||||||||||| ||||| Sbjct: 43382 acttccgctcccccgccaagatcctctggcgcaccgtccgcgg 43340 Score = 145 bits (73), Expect = 2e-31 Identities = 103/113 (91%) Strand = Plus / Minus Query: 384 gaggagaagaggaaggagaaggccaaggtctcttacgacaggaggaagcaactggccaag 443 ||||||||||||||||||||||||||||| | || |||||||||||||||||||| ||| Sbjct: 42102 gaggagaagaggaaggagaaggccaaggttgcctatgacaggaggaagcaactggcgaag 42043 Query: 444 ctgcgcgtcaaggctgagaaggctgcagaggagaagctgggttctcagttgga 496 ||||| ||||||||||||||||| || ||||||||||||||| ||||| |||| Sbjct: 42042 ctgcgtgtcaaggctgagaaggcagccgaggagaagctgggtcctcagctgga 41990 Score = 125 bits (63), Expect = 2e-25 Identities = 121/139 (87%), Gaps = 1/139 (0%) Strand = Plus / Plus Query: 34 agatgtgcatctccggcgggctggtccgtcagaagatgaagtacctccgcttcctccgca 93 |||| ||||| |||||||| || ||||| ||||||||||||||||||||||||||||| | Sbjct: 56395 agatctgcatgtccggcggcctcgtccgccagaagatgaagtacctccgcttcctccg-a 56453 Query: 94 agcggatgaacaccaagccgtcgcacggtcccatccacttccgcgccccctcgaaaattt 153 || |||||||||||||||| || || || ||||||||||||||| ||||| | || || Sbjct: 56454 agaggatgaacaccaagccctcccatggccccatccacttccgctcccccgccaagatcc 56513 Query: 154 tctggcgcaccgtgcgcgg 172 ||||||||||||| ||||| Sbjct: 56514 tctggcgcaccgtccgcgg 56532 Score = 93.7 bits (47), Expect = 6e-16 Identities = 101/119 (84%) Strand = Plus / Minus Query: 172 gcatgatcccgcacaagacgccccgcggcgaggctgcgctcgccaggctgaaggcgttcg 231 ||||||||||||||||||| | || ||||| ||||| || ||||||||||||| || Sbjct: 43242 gcatgatcccgcacaagaccaagaggggagaggcggcgctggcaaggctgaaggcgtacg 43183 Query: 232 agggcgtcccgccgccttatgatcgcaccaagcgtatggtcatccccgacgcgctcaag 290 ||||||| |||||||| || || | |||||||| |||||||||||||||||||||||| Sbjct: 43182 agggcgtgccgccgccgtacgacaggaccaagcgcatggtcatccccgacgcgctcaag 43124 Score = 77.8 bits (39), Expect = 3e-11 Identities = 68/78 (87%) Strand = Plus / Plus Query: 290 ggttctgaggctgcagccgggtcataagtactgccttcncggcgagctttccaaggaggt 349 |||||||||||||||||| || || ||||||||||| | |||| |||| ||||||||||| Sbjct: 56866 ggttctgaggctgcagcctgggcacaagtactgcctcctcggccagctctccaaggaggt 56925 Query: 350 cgggtggaactaccatga 367 || ||||||||| |||| Sbjct: 56926 tggctggaactactatga 56943 Score = 77.8 bits (39), Expect = 3e-11 Identities = 99/119 (83%) Strand = Plus / Plus Query: 172 gcatgatcccgcacaagacgccccgcggcgaggctgcgctcgccaggctgaaggcgttcg 231 ||||||||||||||||||| | || ||||| ||||| || ||||||||||||| || Sbjct: 56646 gcatgatcccgcacaagaccaagaggggagaggcggcgctggcaaggctgaaggcgtacg 56705 Query: 232 agggcgtcccgccgccttatgatcgcaccaagcgtatggtcatccccgacgcgctcaag 290 ||| ||| ||||||| || || | |||||||| |||||||||||||||||||||||| Sbjct: 56706 aggtcgtgacgccgccgtacgacaggaccaagcgcatggtcatccccgacgcgctcaag 56764 Score = 77.8 bits (39), Expect = 3e-11 Identities = 68/78 (87%) Strand = Plus / Minus Query: 290 ggttctgaggctgcagccgggtcataagtactgccttcncggcgagctttccaaggaggt 349 |||||||||||||||||| || || ||||||||||| | |||| |||| ||||||||||| Sbjct: 43032 ggttctgaggctgcagcctgggcacaagtactgcctcctcggccagctctccaaggaggt 42973 Query: 350 cgggtggaactaccatga 367 || ||||||||| |||| Sbjct: 42972 tggctggaactactatga 42955
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 149 bits (75), Expect = 1e-32 Identities = 142/163 (87%), Gaps = 1/163 (0%) Strand = Plus / Plus Query: 10 cgtggtggtggttcggtgcgaggnagatgtgcatctccggcgggctggtccgtcagaaga 69 ||||||||| || || ||||||| |||| ||||| |||||||| || ||||| ||||||| Sbjct: 30990112 cgtggtggtcgtccgctgcgagg-agatctgcatgtccggcggcctcgtccgccagaaga 30990170 Query: 70 tgaagtacctccgcttcctccgcaagcggatgaacaccaagccgtcgcacggtcccatcc 129 |||||||||||||||||||||||||| |||||||||||||||| || || || ||||||| Sbjct: 30990171 tgaagtacctccgcttcctccgcaagaggatgaacaccaagccctcccatggccccatcc 30990230 Query: 130 acttccgcgccccctcgaaaattttctggcgcaccgtgcgcgg 172 |||||||| ||||| | || || ||||||||||||| ||||| Sbjct: 30990231 acttccgctcccccgccaagatcctctggcgcaccgtccgcgg 30990273 Score = 145 bits (73), Expect = 2e-31 Identities = 103/113 (91%) Strand = Plus / Plus Query: 384 gaggagaagaggaaggagaaggccaaggtctcttacgacaggaggaagcaactggccaag 443 ||||||||||||||||||||||||||||| | || |||||||||||||||||||| ||| Sbjct: 30991511 gaggagaagaggaaggagaaggccaaggttgcctatgacaggaggaagcaactggcgaag 30991570 Query: 444 ctgcgcgtcaaggctgagaaggctgcagaggagaagctgggttctcagttgga 496 ||||| ||||||||||||||||| || ||||||||||||||| ||||| |||| Sbjct: 30991571 ctgcgtgtcaaggctgagaaggcagccgaggagaagctgggtcctcagctgga 30991623 Score = 125 bits (63), Expect = 2e-25 Identities = 121/139 (87%), Gaps = 1/139 (0%) Strand = Plus / Minus Query: 34 agatgtgcatctccggcgggctggtccgtcagaagatgaagtacctccgcttcctccgca 93 |||| ||||| |||||||| || ||||| ||||||||||||||||||||||||||||| | Sbjct: 30977218 agatctgcatgtccggcggcctcgtccgccagaagatgaagtacctccgcttcctccg-a 30977160 Query: 94 agcggatgaacaccaagccgtcgcacggtcccatccacttccgcgccccctcgaaaattt 153 || |||||||||||||||| || || || ||||||||||||||| ||||| | || || Sbjct: 30977159 agaggatgaacaccaagccctcccatggccccatccacttccgctcccccgccaagatcc 30977100 Query: 154 tctggcgcaccgtgcgcgg 172 ||||||||||||| ||||| Sbjct: 30977099 tctggcgcaccgtccgcgg 30977081 Score = 93.7 bits (47), Expect = 6e-16 Identities = 101/119 (84%) Strand = Plus / Plus Query: 172 gcatgatcccgcacaagacgccccgcggcgaggctgcgctcgccaggctgaaggcgttcg 231 ||||||||||||||||||| | || ||||| ||||| || ||||||||||||| || Sbjct: 30990371 gcatgatcccgcacaagaccaagaggggagaggcggcgctggcaaggctgaaggcgtacg 30990430 Query: 232 agggcgtcccgccgccttatgatcgcaccaagcgtatggtcatccccgacgcgctcaag 290 ||||||| |||||||| || || | |||||||| |||||||||||||||||||||||| Sbjct: 30990431 agggcgtgccgccgccgtacgacaggaccaagcgcatggtcatccccgacgcgctcaag 30990489 Score = 77.8 bits (39), Expect = 3e-11 Identities = 68/78 (87%) Strand = Plus / Plus Query: 290 ggttctgaggctgcagccgggtcataagtactgccttcncggcgagctttccaaggaggt 349 |||||||||||||||||| || || ||||||||||| | |||| |||| ||||||||||| Sbjct: 30990581 ggttctgaggctgcagcctgggcacaagtactgcctcctcggccagctctccaaggaggt 30990640 Query: 350 cgggtggaactaccatga 367 || ||||||||| |||| Sbjct: 30990641 tggctggaactactatga 30990658 Score = 77.8 bits (39), Expect = 3e-11 Identities = 99/119 (83%) Strand = Plus / Minus Query: 172 gcatgatcccgcacaagacgccccgcggcgaggctgcgctcgccaggctgaaggcgttcg 231 ||||||||||||||||||| | || ||||| ||||| || ||||||||||||| || Sbjct: 30976967 gcatgatcccgcacaagaccaagaggggagaggcggcgctggcaaggctgaaggcgtacg 30976908 Query: 232 agggcgtcccgccgccttatgatcgcaccaagcgtatggtcatccccgacgcgctcaag 290 ||| ||| ||||||| || || | |||||||| |||||||||||||||||||||||| Sbjct: 30976907 aggtcgtgacgccgccgtacgacaggaccaagcgcatggtcatccccgacgcgctcaag 30976849 Score = 77.8 bits (39), Expect = 3e-11 Identities = 68/78 (87%) Strand = Plus / Minus Query: 290 ggttctgaggctgcagccgggtcataagtactgccttcncggcgagctttccaaggaggt 349 |||||||||||||||||| || || ||||||||||| | |||| |||| ||||||||||| Sbjct: 30976747 ggttctgaggctgcagcctgggcacaagtactgcctcctcggccagctctccaaggaggt 30976688 Query: 350 cgggtggaactaccatga 367 || ||||||||| |||| Sbjct: 30976687 tggctggaactactatga 30976670 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 383 ggaggagaagaggaaggagaaggc 406 ||||||||||||||||| |||||| Sbjct: 34463169 ggaggagaagaggaaggtgaaggc 34463146
>gb|AF503433.1| Sorghum bicolor BAC 170F8, complete sequence Length = 142376 Score = 137 bits (69), Expect = 4e-29 Identities = 102/113 (90%) Strand = Plus / Plus Query: 384 gaggagaagaggaaggagaaggccaaggtctcttacgacaggaggaagcaactggccaag 443 ||||||||||||||||||||||||||||| | || || ||||||||||||||||||||| Sbjct: 70340 gaggagaagaggaaggagaaggccaaggttgcctatgagaggaggaagcaactggccaag 70399 Query: 444 ctgcgcgtcaaggctgagaaggctgcagaggagaagctgggttctcagttgga 496 ||||| ||||||||||||||| | || |||||||||||||| |||||| |||| Sbjct: 70400 ctgcgtgtcaaggctgagaagacagccgaggagaagctgggatctcagctgga 70452 Score = 131 bits (66), Expect = 3e-27 Identities = 99/110 (90%) Strand = Plus / Plus Query: 34 agatgtgcatctccggcgggctggtccgtcagaagatgaagtacctccgcttcctccgca 93 |||| ||||| || ||||| || ||||| ||||||||||||||||||||||||||||||| Sbjct: 69013 agatctgcatgtcgggcggcctcgtccgccagaagatgaagtacctccgcttcctccgca 69072 Query: 94 agcggatgaacaccaagccgtcgcacggtcccatccacttccgcgccccc 143 || ||||||||||||||||||| ||||| ||||| |||||||| |||||| Sbjct: 69073 agaggatgaacaccaagccgtctcacggccccattcacttccgtgccccc 69122 Score = 93.7 bits (47), Expect = 6e-16 Identities = 70/78 (89%) Strand = Plus / Plus Query: 290 ggttctgaggctgcagccgggtcataagtactgccttcncggcgagctttccaaggaggt 349 |||||||||||||||||| || || ||||||||||| | ||||||||| || |||||||| Sbjct: 69466 ggttctgaggctgcagcctgggcacaagtactgcctcctcggcgagctctctaaggaggt 69525 Query: 350 cgggtggaactaccatga 367 ||| |||||||||||||| Sbjct: 69526 cggatggaactaccatga 69543
>gb|AY013245.2| Oryza sativa (japonica cultivar-group) chromosome 3 BAC 36I5, partial sequence Length = 65547 Score = 125 bits (63), Expect = 2e-25 Identities = 121/139 (87%), Gaps = 1/139 (0%) Strand = Plus / Plus Query: 34 agatgtgcatctccggcgggctggtccgtcagaagatgaagtacctccgcttcctccgca 93 |||| ||||| |||||||| || ||||| ||||||||||||||||||||||||||||| | Sbjct: 54421 agatctgcatgtccggcggcctcgtccgccagaagatgaagtacctccgcttcctccg-a 54479 Query: 94 agcggatgaacaccaagccgtcgcacggtcccatccacttccgcgccccctcgaaaattt 153 || |||||||||||||||| || || || ||||||||||||||| ||||| | || || Sbjct: 54480 agaggatgaacaccaagccctcccatggccccatccacttccgctcccccgccaagatcc 54539 Query: 154 tctggcgcaccgtgcgcgg 172 ||||||||||||| ||||| Sbjct: 54540 tctggcgcaccgtccgcgg 54558 Score = 77.8 bits (39), Expect = 3e-11 Identities = 68/78 (87%) Strand = Plus / Plus Query: 290 ggttctgaggctgcagccgggtcataagtactgccttcncggcgagctttccaaggaggt 349 |||||||||||||||||| || || ||||||||||| | |||| |||| ||||||||||| Sbjct: 54892 ggttctgaggctgcagcctgggcacaagtactgcctcctcggccagctctccaaggaggt 54951 Query: 350 cgggtggaactaccatga 367 || ||||||||| |||| Sbjct: 54952 tggctggaactactatga 54969 Score = 77.8 bits (39), Expect = 3e-11 Identities = 99/119 (83%) Strand = Plus / Plus Query: 172 gcatgatcccgcacaagacgccccgcggcgaggctgcgctcgccaggctgaaggcgttcg 231 ||||||||||||||||||| | || ||||| ||||| || ||||||||||||| || Sbjct: 54672 gcatgatcccgcacaagaccaagaggggagaggcggcgctggcaaggctgaaggcgtacg 54731 Query: 232 agggcgtcccgccgccttatgatcgcaccaagcgtatggtcatccccgacgcgctcaag 290 ||| ||| ||||||| || || | |||||||| |||||||||||||||||||||||| Sbjct: 54732 aggtcgtgacgccgccgtacgacaggaccaagcgcatggtcatccccgacgcgctcaag 54790
>gb|AC146913.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0013C12 map near S6115, complete sequence Length = 123718 Score = 91.7 bits (46), Expect = 2e-15 Identities = 79/90 (87%) Strand = Plus / Plus Query: 201 gaggctgcgctcgccaggctgaaggcgttcgagggcgtcccgccgccttatgatcgcacc 260 ||||| ||||| || ||||||||||||| ||||||||| |||||||| || || | ||| Sbjct: 110168 gaggcggcgctggcaaggctgaaggcgtacgagggcgtgccgccgccgtacgacaggacc 110227 Query: 261 aagcgtatggtcatccccgacgcgctcaag 290 ||||| |||||||||||||||||||||||| Sbjct: 110228 aagcgcatggtcatccccgacgcgctcaag 110257 Score = 75.8 bits (38), Expect = 1e-10 Identities = 64/73 (87%) Strand = Plus / Plus Query: 290 ggttctgaggctgcagccgggtcataagtactgccttcncggcgagctttccaaggaggt 349 |||||||||||||||||| || || ||||||||||| | |||| |||| ||||||||||| Sbjct: 110358 ggttctgaggctgcagcctgggcacaagtactgcctcctcggccagctctccaaggaggt 110417 Query: 350 cgggtggaactac 362 || ||||||||| Sbjct: 110418 tggctggaactac 110430
>gb|AC145327.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0095J10 map near S6115, complete sequence Length = 123717 Score = 91.7 bits (46), Expect = 2e-15 Identities = 79/90 (87%) Strand = Plus / Plus Query: 201 gaggctgcgctcgccaggctgaaggcgttcgagggcgtcccgccgccttatgatcgcacc 260 ||||| ||||| || ||||||||||||| ||||||||| |||||||| || || | ||| Sbjct: 14757 gaggcggcgctggcaaggctgaaggcgtacgagggcgtgccgccgccgtacgacaggacc 14816 Query: 261 aagcgtatggtcatccccgacgcgctcaag 290 ||||| |||||||||||||||||||||||| Sbjct: 14817 aagcgcatggtcatccccgacgcgctcaag 14846 Score = 75.8 bits (38), Expect = 1e-10 Identities = 64/73 (87%) Strand = Plus / Plus Query: 290 ggttctgaggctgcagccgggtcataagtactgccttcncggcgagctttccaaggaggt 349 |||||||||||||||||| || || ||||||||||| | |||| |||| ||||||||||| Sbjct: 14947 ggttctgaggctgcagcctgggcacaagtactgcctcctcggccagctctccaaggaggt 15006 Query: 350 cgggtggaactac 362 || ||||||||| Sbjct: 15007 tggctggaactac 15019
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 91.7 bits (46), Expect = 2e-15 Identities = 79/90 (87%) Strand = Plus / Plus Query: 201 gaggctgcgctcgccaggctgaaggcgttcgagggcgtcccgccgccttatgatcgcacc 260 ||||| ||||| || ||||||||||||| ||||||||| |||||||| || || | ||| Sbjct: 12942832 gaggcggcgctggcaaggctgaaggcgtacgagggcgtgccgccgccgtacgacaggacc 12942891 Query: 261 aagcgtatggtcatccccgacgcgctcaag 290 ||||| |||||||||||||||||||||||| Sbjct: 12942892 aagcgcatggtcatccccgacgcgctcaag 12942921 Score = 75.8 bits (38), Expect = 1e-10 Identities = 64/73 (87%) Strand = Plus / Plus Query: 290 ggttctgaggctgcagccgggtcataagtactgccttcncggcgagctttccaaggaggt 349 |||||||||||||||||| || || ||||||||||| | |||| |||| ||||||||||| Sbjct: 12943022 ggttctgaggctgcagcctgggcacaagtactgcctcctcggccagctctccaaggaggt 12943081 Query: 350 cgggtggaactac 362 || ||||||||| Sbjct: 12943082 tggctggaactac 12943094
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 91.7 bits (46), Expect = 2e-15 Identities = 79/90 (87%) Strand = Plus / Plus Query: 201 gaggctgcgctcgccaggctgaaggcgttcgagggcgtcccgccgccttatgatcgcacc 260 ||||| ||||| || ||||||||||||| ||||||||| |||||||| || || | ||| Sbjct: 13023039 gaggcggcgctggcaaggctgaaggcgtacgagggcgtgccgccgccgtacgacaggacc 13023098 Query: 261 aagcgtatggtcatccccgacgcgctcaag 290 ||||| |||||||||||||||||||||||| Sbjct: 13023099 aagcgcatggtcatccccgacgcgctcaag 13023128 Score = 75.8 bits (38), Expect = 1e-10 Identities = 64/73 (87%) Strand = Plus / Plus Query: 290 ggttctgaggctgcagccgggtcataagtactgccttcncggcgagctttccaaggaggt 349 |||||||||||||||||| || || ||||||||||| | |||| |||| ||||||||||| Sbjct: 13023229 ggttctgaggctgcagcctgggcacaagtactgcctcctcggccagctctccaaggaggt 13023288 Query: 350 cgggtggaactac 362 || ||||||||| Sbjct: 13023289 tggctggaactac 13023301
>ref|NM_111591.2| Arabidopsis thaliana structural constituent of ribosome AT3G07110 transcript variant AT3G07110.1 mRNA, complete cds Length = 881 Score = 81.8 bits (41), Expect = 2e-12 Identities = 144/177 (81%), Gaps = 1/177 (0%) Strand = Plus / Plus Query: 14 gtggtggttcggtgcgaggnagatgtgcatctccggcgggctggtccgtcagaagatgaa 73 ||||| || |||||||||| |||| || |||||||||| || || |||||||||||||| Sbjct: 179 gtggttgtccggtgcgagg-agatttgtctctccggcggacttgttcgtcagaagatgaa 237 Query: 74 gtacctccgcttcctccgcaagcggatgaacaccaagccgtcgcacggtcccatccactt 133 |||| | | || ||||| ||||| |||||||| || || || ||||| || || ||||| Sbjct: 238 gtacatgaggtttctccgtaagcgtatgaacactaaaccttctcacggacctattcactt 297 Query: 134 ccgcgccccctcgaaaattttctggcgcaccgtgcgcggcatgatcccgcacaagac 190 ||| || ||||| || || |||||||| ||||| ||||| ||||| || |||||||| Sbjct: 298 ccgtgctccctccaagatcttctggcgtaccgttcgcggtatgattccacacaagac 354
>ref|NM_001035577.1| Arabidopsis thaliana structural constituent of ribosome AT3G07110 transcript variant AT3G07110.2 mRNA, complete cds Length = 893 Score = 81.8 bits (41), Expect = 2e-12 Identities = 144/177 (81%), Gaps = 1/177 (0%) Strand = Plus / Plus Query: 14 gtggtggttcggtgcgaggnagatgtgcatctccggcgggctggtccgtcagaagatgaa 73 ||||| || |||||||||| |||| || |||||||||| || || |||||||||||||| Sbjct: 188 gtggttgtccggtgcgagg-agatttgtctctccggcggacttgttcgtcagaagatgaa 246 Query: 74 gtacctccgcttcctccgcaagcggatgaacaccaagccgtcgcacggtcccatccactt 133 |||| | | || ||||| ||||| |||||||| || || || ||||| || || ||||| Sbjct: 247 gtacatgaggtttctccgtaagcgtatgaacactaaaccttctcacggacctattcactt 306 Query: 134 ccgcgccccctcgaaaattttctggcgcaccgtgcgcggcatgatcccgcacaagac 190 ||| || ||||| || || |||||||| ||||| ||||| ||||| || |||||||| Sbjct: 307 ccgtgctccctccaagatcttctggcgtaccgttcgcggtatgattccacacaagac 363
>gb|DQ099054.1| Arachis stenosperma clone AS1RN3B12 microsatellite sequence Length = 758 Score = 81.8 bits (41), Expect = 2e-12 Identities = 144/177 (81%), Gaps = 1/177 (0%) Strand = Plus / Minus Query: 14 gtggtggttcggtgcgaggnagatgtgcatctccggcgggctggtccgtcagaagatgaa 73 ||||||||| ||||||||| |||| ||||| ||||| ||||| || | ||||| ||||| Sbjct: 560 gtggtggttaggtgcgagg-agatctgcatttccggtgggctcgtgagacagaaaatgaa 502 Query: 74 gtacctccgcttcctccgcaagcggatgaacaccaagccgtcgcacggtcccatccactt 133 ||| | | |||||||| ||| |||||||||| ||||| || || ||||||||||| || Sbjct: 501 gtatatgaggttcctccgtaagaggatgaacactaagccctctcatggtcccatccattt 442 Query: 134 ccgcgccccctcgaaaattttctggcgcaccgtgcgcggcatgatcccgcacaagac 190 ||| || || || || || |||||||||||||| || || ||||| || |||||||| Sbjct: 441 ccgtgctccttctaagatcttctggcgcaccgttcgaggtatgataccacacaagac 385 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 456 gctgagaaggctgcagaggagaagctgggttc 487 |||||||||| ||| ||||||||||| ||||| Sbjct: 119 gctgagaaggttgctgaggagaagcttggttc 88
>gb|AY114589.1| Arabidopsis thaliana putative 60S ribosomal protein L13A (At3g07110) mRNA, complete cds Length = 667 Score = 81.8 bits (41), Expect = 2e-12 Identities = 144/177 (81%), Gaps = 1/177 (0%) Strand = Plus / Plus Query: 14 gtggtggttcggtgcgaggnagatgtgcatctccggcgggctggtccgtcagaagatgaa 73 ||||| || |||||||||| |||| || |||||||||| || || |||||||||||||| Sbjct: 115 gtggttgtccggtgcgagg-agatttgtctctccggcggacttgttcgtcagaagatgaa 173 Query: 74 gtacctccgcttcctccgcaagcggatgaacaccaagccgtcgcacggtcccatccactt 133 |||| | | || ||||| ||||| |||||||| || || || ||||| || || ||||| Sbjct: 174 gtacatgaggtttctccgtaagcgtatgaacactaaaccttctcacggacctattcactt 233 Query: 134 ccgcgccccctcgaaaattttctggcgcaccgtgcgcggcatgatcccgcacaagac 190 ||| || ||||| || || |||||||| ||||| ||||| ||||| || |||||||| Sbjct: 234 ccgtgctccctccaagatcttctggcgtaccgttcgcggtatgattccacacaagac 290
>gb|AY062793.1| Arabidopsis thaliana putative 60S ribosomal protein L13A (At3g07110; T1B9.24) mRNA, complete cds Length = 811 Score = 81.8 bits (41), Expect = 2e-12 Identities = 144/177 (81%), Gaps = 1/177 (0%) Strand = Plus / Plus Query: 14 gtggtggttcggtgcgaggnagatgtgcatctccggcgggctggtccgtcagaagatgaa 73 ||||| || |||||||||| |||| || |||||||||| || || |||||||||||||| Sbjct: 178 gtggttgtccggtgcgagg-agatttgtctctccggcggacttgttcgtcagaagatgaa 236 Query: 74 gtacctccgcttcctccgcaagcggatgaacaccaagccgtcgcacggtcccatccactt 133 |||| | | || ||||| ||||| |||||||| || || || ||||| || || ||||| Sbjct: 237 gtacatgaggtttctccgtaagcgtatgaacactaaaccttctcacggacctattcactt 296 Query: 134 ccgcgccccctcgaaaattttctggcgcaccgtgcgcggcatgatcccgcacaagac 190 ||| || ||||| || || |||||||| ||||| ||||| ||||| || |||||||| Sbjct: 297 ccgtgctccctccaagatcttctggcgtaccgttcgcggtatgattccacacaagac 353
>gb|AY057551.1| Arabidopsis thaliana AT3g07110/T1B9_24 mRNA, complete cds Length = 831 Score = 81.8 bits (41), Expect = 2e-12 Identities = 144/177 (81%), Gaps = 1/177 (0%) Strand = Plus / Plus Query: 14 gtggtggttcggtgcgaggnagatgtgcatctccggcgggctggtccgtcagaagatgaa 73 ||||| || |||||||||| |||| || |||||||||| || || |||||||||||||| Sbjct: 178 gtggttgtccggtgcgagg-agatttgtctctccggcggacttgttcgtcagaagatgaa 236 Query: 74 gtacctccgcttcctccgcaagcggatgaacaccaagccgtcgcacggtcccatccactt 133 |||| | | || ||||| ||||| |||||||| || || || ||||| || || ||||| Sbjct: 237 gtacatgaggtttctccgtaagcgtatgaacactaaaccttctcacggacctattcactt 296 Query: 134 ccgcgccccctcgaaaattttctggcgcaccgtgcgcggcatgatcccgcacaagac 190 ||| || ||||| || || |||||||| ||||| ||||| ||||| || |||||||| Sbjct: 297 ccgtgctccctccaagatcttctggcgtaccgttcgcggtatgattccacacaagac 353
>gb|AF325041.2|AF325041 Arabidopsis thaliana AT3g07110 (AT3g07110/T1B9_24) mRNA, complete cds Length = 829 Score = 81.8 bits (41), Expect = 2e-12 Identities = 144/177 (81%), Gaps = 1/177 (0%) Strand = Plus / Plus Query: 14 gtggtggttcggtgcgaggnagatgtgcatctccggcgggctggtccgtcagaagatgaa 73 ||||| || |||||||||| |||| || |||||||||| || || |||||||||||||| Sbjct: 178 gtggttgtccggtgcgagg-agatttgtctctccggcggacttgttcgtcagaagatgaa 236 Query: 74 gtacctccgcttcctccgcaagcggatgaacaccaagccgtcgcacggtcccatccactt 133 |||| | | || ||||| ||||| |||||||| || || || ||||| || || ||||| Sbjct: 237 gtacatgaggtttctccgtaagcgtatgaacactaaaccttctcacggacctattcactt 296 Query: 134 ccgcgccccctcgaaaattttctggcgcaccgtgcgcggcatgatcccgcacaagac 190 ||| || ||||| || || |||||||| ||||| ||||| ||||| || |||||||| Sbjct: 297 ccgtgctccctccaagatcttctggcgtaccgttcgcggtatgattccacacaagac 353
>emb|BX822336.1|CNS0A5ZO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB2ZC08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 788 Score = 81.8 bits (41), Expect = 2e-12 Identities = 144/177 (81%), Gaps = 1/177 (0%) Strand = Plus / Plus Query: 14 gtggtggttcggtgcgaggnagatgtgcatctccggcgggctggtccgtcagaagatgaa 73 ||||| || |||||||||| |||| || |||||||||| || || |||||||||||||| Sbjct: 162 gtggttgtccggtgcgagg-agatttgtctctccggcggacttgttcgtcagaagatgaa 220 Query: 74 gtacctccgcttcctccgcaagcggatgaacaccaagccgtcgcacggtcccatccactt 133 |||| | | || ||||| ||||| |||||||| || || || ||||| || || ||||| Sbjct: 221 gtacatgaggtttctccgtaagcgtatgaacactaaaccttctcacggacctattcactt 280 Query: 134 ccgcgccccctcgaaaattttctggcgcaccgtgcgcggcatgatcccgcacaagac 190 ||| || ||||| || || |||||||| ||||| ||||| ||||| || |||||||| Sbjct: 281 ccgtgctccctccaagatcttctggcgtaccgttcgcggtatgattccacacaagac 337
>emb|BX824368.1|CNS0A5OL Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH43ZE05 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 800 Score = 81.8 bits (41), Expect = 2e-12 Identities = 144/177 (81%), Gaps = 1/177 (0%) Strand = Plus / Plus Query: 14 gtggtggttcggtgcgaggnagatgtgcatctccggcgggctggtccgtcagaagatgaa 73 ||||| || |||||||||| |||| || |||||||||| || || |||||||||||||| Sbjct: 156 gtggttgtccggtgcgagg-agatttgtctctccggcggacttgttcgtcagaagatgaa 214 Query: 74 gtacctccgcttcctccgcaagcggatgaacaccaagccgtcgcacggtcccatccactt 133 |||| | | || ||||| ||||| |||||||| || || || ||||| || || ||||| Sbjct: 215 gtacatgaggtttctccgtaagcgtatgaacactaaaccttctcacggacctattcactt 274 Query: 134 ccgcgccccctcgaaaattttctggcgcaccgtgcgcggcatgatcccgcacaagac 190 ||| || ||||| || || |||||||| ||||| ||||| ||||| || |||||||| Sbjct: 275 ccgtgctccctccaagatcttctggcgtaccgttcgcggtatgattccacacaagac 331
>emb|BX822519.1|CNS0A5UA Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB45ZA10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 781 Score = 81.8 bits (41), Expect = 2e-12 Identities = 144/177 (81%), Gaps = 1/177 (0%) Strand = Plus / Plus Query: 14 gtggtggttcggtgcgaggnagatgtgcatctccggcgggctggtccgtcagaagatgaa 73 ||||| || |||||||||| |||| || |||||||||| || || |||||||||||||| Sbjct: 140 gtggttgtccggtgcgagg-agatttgtctctccggcggacttgttcgtcagaagatgaa 198 Query: 74 gtacctccgcttcctccgcaagcggatgaacaccaagccgtcgcacggtcccatccactt 133 |||| | | || ||||| ||||| |||||||| || || || ||||| || || ||||| Sbjct: 199 gtacatgaggtttctccgtaagcgtatgaacactaaaccttctcacggacctattcactt 258 Query: 134 ccgcgccccctcgaaaattttctggcgcaccgtgcgcggcatgatcccgcacaagac 190 ||| || ||||| || || |||||||| ||||| ||||| ||||| || |||||||| Sbjct: 259 ccgtgctccctccaagatcttctggcgtaccgttcgcggtatgattccacacaagac 315
>emb|BX822098.1|CNS0A5TD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB12ZA04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 660 Score = 81.8 bits (41), Expect = 2e-12 Identities = 144/177 (81%), Gaps = 1/177 (0%) Strand = Plus / Plus Query: 14 gtggtggttcggtgcgaggnagatgtgcatctccggcgggctggtccgtcagaagatgaa 73 ||||| || |||||||||| |||| || |||||||||| || || |||||||||||||| Sbjct: 30 gtggttgtccggtgcgagg-agatttgtctctccggcggacttgttcgtcagaagatgaa 88 Query: 74 gtacctccgcttcctccgcaagcggatgaacaccaagccgtcgcacggtcccatccactt 133 |||| | | || ||||| ||||| |||||||| || || || ||||| || || ||||| Sbjct: 89 gtacatgaggtttctccgtaagcgtatgaacactaaaccttctcacggacctattcactt 148 Query: 134 ccgcgccccctcgaaaattttctggcgcaccgtgcgcggcatgatcccgcacaagac 190 ||| || ||||| || || |||||||| ||||| ||||| ||||| || |||||||| Sbjct: 149 ccgtgctccctccaagatcttctggcgtaccgttcgcggtatgattccacacaagac 205
>gb|AF521144.1| Kandelia candel 60S ribosomal protein mRNA, partial cds Length = 236 Score = 77.8 bits (39), Expect = 3e-11 Identities = 72/83 (86%) Strand = Plus / Plus Query: 63 cagaagatgaagtacctccgcttcctccgcaagcggatgaacaccaagccgtcgcacggt 122 ||||||||||||||||| | ||||| ||||| || |||||||||||||| || ||||| Sbjct: 142 cagaagatgaagtacctgaggttccttcgcaaacgcatgaacaccaagccttctcacgga 201 Query: 123 cccatccacttccgcgccccctc 145 |||||||| |||||||| ||||| Sbjct: 202 cccatccatttccgcgctccctc 224
>gb|AC012395.5|ATAC012395 Arabidopsis thaliana chromosome III BAC T1B9 genomic sequence, complete sequence Length = 99128 Score = 69.9 bits (35), Expect = 8e-09 Identities = 129/159 (81%), Gaps = 1/159 (0%) Strand = Plus / Minus Query: 14 gtggtggttcggtgcgaggnagatgtgcatctccggcgggctggtccgtcagaagatgaa 73 ||||| || |||||||||| |||| || |||||||||| || || |||||||||||||| Sbjct: 82577 gtggttgtccggtgcgagg-agatttgtctctccggcggacttgttcgtcagaagatgaa 82519 Query: 74 gtacctccgcttcctccgcaagcggatgaacaccaagccgtcgcacggtcccatccactt 133 |||| | | || ||||| ||||| |||||||| || || || ||||| || || ||||| Sbjct: 82518 gtacatgaggtttctccgtaagcgtatgaacactaaaccttctcacggacctattcactt 82459 Query: 134 ccgcgccccctcgaaaattttctggcgcaccgtgcgcgg 172 ||| || ||||| || || |||||||| ||||| ||||| Sbjct: 82458 ccgtgctccctccaagatcttctggcgtaccgttcgcgg 82420
>gb|AY498745.1| Capsicum annuum 60S ribosomal protein L13a (RpL13a) mRNA, complete cds Length = 797 Score = 67.9 bits (34), Expect = 3e-08 Identities = 101/122 (82%), Gaps = 1/122 (0%) Strand = Plus / Plus Query: 369 actatcaaggaactggaggagaagaggaaggagaaggccaaggtctcttacgacaggagg 428 ||||||||||| || ||||| ||||| ||||||| ||| ||||| |||| || ||||| Sbjct: 535 actatcaaggagctcgaggacaagagaaaggagagagcccaggtcacttatgagaggaga 594 Query: 429 aagcaactggccaagctgcgcgtcaaggctgagaaggctgcagaggagaagctgggttct 488 ||||| |||||||| || | || |||||||| |||||||| ||||||||||| ||| || Sbjct: 595 aagcagctggccaaactcagggttaaggctga-aaggctgccgaggagaagctcggtcct 653 Query: 489 ca 490 || Sbjct: 654 ca 655
>ref|XM_509965.1| PREDICTED: Pan troglodytes similar to ribosomal protein L13a; 60S ribosomal protein L13a; 23 kD highly basic protein (LOC452925), mRNA Length = 581 Score = 60.0 bits (30), Expect = 8e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 |||||||||||||||||||||||||||||| Sbjct: 387 ctggaggagaagaggaaggagaaggccaag 416 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacaccaa 109 |||||| ||||||||||||||||||| Sbjct: 169 ttcctctgcaagcggatgaacaccaa 194
>ref|XM_526928.1| PREDICTED: Pan troglodytes integrin alpha 2 (LOC471550), mRNA Length = 3000 Score = 60.0 bits (30), Expect = 8e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 |||||||||||||||||||||||||||||| Sbjct: 2854 ctggaggagaagaggaaggagaaggccaag 2883
>ref|XM_514152.1| PREDICTED: Pan troglodytes similar to ribosomal protein L13a; 60S ribosomal protein L13a; 23 kD highly basic protein (LOC457684), mRNA Length = 663 Score = 60.0 bits (30), Expect = 8e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 |||||||||||||||||||||||||||||| Sbjct: 466 ctggaggagaagaggaaggagaaggccaag 495
>gb|AC125807.9| Homo sapiens 12 BAC RP11-253E3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 131995 Score = 60.0 bits (30), Expect = 8e-06 Identities = 30/30 (100%) Strand = Plus / Minus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 |||||||||||||||||||||||||||||| Sbjct: 81677 ctggaggagaagaggaaggagaaggccaag 81648
>gb|AC020750.4| Homo sapiens chromosome 3 clone RP11-105H19 map 3p, complete sequence Length = 156933 Score = 60.0 bits (30), Expect = 8e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 |||||||||||||||||||||||||||||| Sbjct: 95013 ctggaggagaagaggaaggagaaggccaag 95042
>gb|AC083855.3| Homo sapiens chromosome 3 clone RP11-622I12 map 3p, complete sequence Length = 190861 Score = 60.0 bits (30), Expect = 8e-06 Identities = 30/30 (100%) Strand = Plus / Minus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 |||||||||||||||||||||||||||||| Sbjct: 188756 ctggaggagaagaggaaggagaaggccaag 188727
>gb|AC003072.1|AC003072 Human BAC clone CTA-963H5 from 22q12.1-qter, complete sequence Length = 39401 Score = 60.0 bits (30), Expect = 8e-06 Identities = 30/30 (100%) Strand = Plus / Minus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 |||||||||||||||||||||||||||||| Sbjct: 2109 ctggaggagaagaggaaggagaaggccaag 2080
>gb|U18488.1|STU18488 Salmo trutta transplantation antigen mRNA, partial cds Length = 621 Score = 58.0 bits (29), Expect = 3e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 382 tggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||||||||||||||| Sbjct: 427 tggaggagaagaggaaggagaaggccaag 455
>gb|AC024940.39| Homo sapiens 12 BAC RP11-627K11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 205952 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 70 tgaagtacctccgcttcctccgcaagcggatgaacaccaa 109 ||||||||||| |||||||||||||||||||||||||| Sbjct: 94900 tgaagtacctcgctttcctccgcaagcggatgaacaccaa 94939 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 95211 ctggaggagaagaggaaagagaaagccaag 95240
>ref|XM_944672.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 4 (LOC648462), mRNA Length = 1590 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 70 tgaagtacctccgcttcctccgcaagcggatgaacaccaa 109 ||||||||||| |||||||||||||||||||||||||| Sbjct: 1115 tgaagtacctcgctttcctccgcaagcggatgaacaccaa 1154 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 1426 ctggaggagaagaggaaagagaaagccaag 1455
>ref|XM_944670.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 3 (LOC648462), mRNA Length = 1547 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 70 tgaagtacctccgcttcctccgcaagcggatgaacaccaa 109 ||||||||||| |||||||||||||||||||||||||| Sbjct: 1040 tgaagtacctcgctttcctccgcaagcggatgaacaccaa 1079 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 1351 ctggaggagaagaggaaagagaaagccaag 1380
>ref|XM_940589.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 1 (LOC648462), mRNA Length = 1642 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 70 tgaagtacctccgcttcctccgcaagcggatgaacaccaa 109 ||||||||||| |||||||||||||||||||||||||| Sbjct: 1115 tgaagtacctcgctttcctccgcaagcggatgaacaccaa 1154 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 1426 ctggaggagaagaggaaagagaaagccaag 1455
>ref|XM_944666.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 2 (LOC648462), mRNA Length = 1542 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 70 tgaagtacctccgcttcctccgcaagcggatgaacaccaa 109 ||||||||||| |||||||||||||||||||||||||| Sbjct: 1115 tgaagtacctcgctttcctccgcaagcggatgaacaccaa 1154 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 1360 ctggaggagaagaggaaagagaaagccaag 1389
>ref|XM_933780.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 4 (LOC441632), mRNA Length = 1589 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 70 tgaagtacctccgcttcctccgcaagcggatgaacaccaa 109 ||||||||||| |||||||||||||||||||||||||| Sbjct: 1114 tgaagtacctcgctttcctccgcaagcggatgaacaccaa 1153 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 1425 ctggaggagaagaggaaagagaaagccaag 1454
>ref|XM_497335.2| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 1 (LOC441632), mRNA Length = 1546 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 70 tgaagtacctccgcttcctccgcaagcggatgaacaccaa 109 ||||||||||| |||||||||||||||||||||||||| Sbjct: 1039 tgaagtacctcgctttcctccgcaagcggatgaacaccaa 1078 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 1350 ctggaggagaagaggaaagagaaagccaag 1379
>ref|XM_929566.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 2 (LOC441632), mRNA Length = 1641 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 70 tgaagtacctccgcttcctccgcaagcggatgaacaccaa 109 ||||||||||| |||||||||||||||||||||||||| Sbjct: 1114 tgaagtacctcgctttcctccgcaagcggatgaacaccaa 1153 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 1425 ctggaggagaagaggaaagagaaagccaag 1454
>ref|XM_933775.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 3 (LOC441632), mRNA Length = 1541 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 70 tgaagtacctccgcttcctccgcaagcggatgaacaccaa 109 ||||||||||| |||||||||||||||||||||||||| Sbjct: 1114 tgaagtacctcgctttcctccgcaagcggatgaacaccaa 1153 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 1359 ctggaggagaagaggaaagagaaagccaag 1388
>gb|AC012156.14|AC012156 Homo sapiens 12p11-37.2-54.4 BAC RP11-433D24 (Rosewell Park Cancer Institute Human Bac Library) complete sequence Length = 162200 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 70 tgaagtacctccgcttcctccgcaagcggatgaacaccaa 109 ||||||||||| |||||||||||||||||||||||||| Sbjct: 94438 tgaagtacctcgctttcctccgcaagcggatgaacaccaa 94399 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Minus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 94127 ctggaggagaagaggaaagagaaagccaag 94098
>gb|DQ200397.1| Solanum tuberosum clone 070F10 60S ribosomal protein L13a-like protein mRNA, complete cds Length = 848 Score = 54.0 bits (27), Expect = 5e-04 Identities = 102/127 (80%) Strand = Plus / Plus Query: 364 atgaaactatcaaggaactggaggagaagaggaaggagaaggccaaggtctcttacgaca 423 |||| ||||||||||| || ||| | ||||| ||||||| ||| |||| | ||||| | Sbjct: 503 atgacactatcaaggagcttgagaacaagagaaaggagagagcccaggtagcatacgaga 562 Query: 424 ggaggaagcaactggccaagctgcgcgtcaaggctgagaaggctgcagaggagaagctgg 483 |||| ||||| ||||||| || | || ||||| ||||||||||| ||||||||||| | Sbjct: 563 ggagaaagcagttggccaaactcagggttaaggccgagaaggctgctgaggagaagctcg 622 Query: 484 gttctca 490 || |||| Sbjct: 623 gtcctca 629
>emb|AJ388525.1|CFA388525 Canis familiaris mRNA for partial Ribosomal protein L13A (rpL13 gene) Length = 427 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 83 cttcctccgcaagcggatgaacaccaa 109 ||||||||||||||||||||||||||| Sbjct: 166 cttcctccgcaagcggatgaacaccaa 192
>gb|AC068898.8| Homo sapiens chromosome 10 clone RP11-534L6, complete sequence Length = 176188 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 381 ctggaggagaagaggaaggagaaggcc 407 ||||||||||||||||||||||||||| Sbjct: 137660 ctggaggagaagaggaaggagaaggcc 137634
>gb|AC035139.11| Homo sapiens chromosome 10 clone RP11-563N6, complete sequence Length = 210472 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 381 ctggaggagaagaggaaggagaaggcc 407 ||||||||||||||||||||||||||| Sbjct: 1543 ctggaggagaagaggaaggagaaggcc 1517
>gb|AC022533.10| Homo sapiens chromosome 10 clone RP11-230D19, complete sequence Length = 174569 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggcc 407 ||||||||||||||||||||||||||| Sbjct: 136015 ctggaggagaagaggaaggagaaggcc 136041
>gb|AY650304.1| Macaca fascicularis ribosomal protein L13A mRNA, partial cds Length = 462 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacaccaa 109 |||||||||||||||||||||||||| Sbjct: 40 ttcctccgcaagcggatgaacaccaa 65 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 382 tggaggagaagaggaaggagaaggccaag 410 |||||||||||||||||||||| |||||| Sbjct: 338 tggaggagaagaggaaggagaaagccaag 366
>gb|AF109186.1| Homo sapiens FWP004 mRNA, complete cds Length = 1247 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacaccaa 109 |||||||||||||||||||||||||| Sbjct: 757 ttcctccgcaagcggatgaacaccaa 782 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 1054 ctggaggagaagaggaaagagaaagccaag 1083
>ref|XM_520729.1| PREDICTED: Pan troglodytes similar to ribosomal protein L13a; 60S ribosomal protein L13a; 23 kD highly basic protein (LOC465277), mRNA Length = 662 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||||||||| |||||| Sbjct: 485 ctggaggagaagaggaaggagaaagccaag 514
>ref|XM_512821.1| PREDICTED: Pan troglodytes similar to ribosomal protein L13a; 60S ribosomal protein L13a; 23 kD highly basic protein (LOC456207), mRNA Length = 865 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacaccaa 109 |||||||||||||||||||||||||| Sbjct: 316 ttcctccgcaagcggatgaacaccaa 341 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 613 ctggaggagaagaggaaagagaaagccaag 642
>ref|XM_512656.1| PREDICTED: Pan troglodytes similar to ribosomal protein L13a; 60S ribosomal protein L13a; 23 kD highly basic protein (LOC456029), mRNA Length = 570 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacaccaa 109 |||||||||||||||||||||||||| Sbjct: 90 ttcctccgcaagcggatgaacaccaa 115 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 386 ctggaggagaagaggaaagagaaagccaag 415
>ref|XM_511050.1| PREDICTED: Pan troglodytes similar to ribosomal protein L13a; 60S ribosomal protein L13a; 23 kD highly basic protein (LOC454185), mRNA Length = 689 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacaccaa 109 |||||||||||||||||||||||||| Sbjct: 192 ttcctccgcaagcggatgaacaccaa 217 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 489 ctggaggagaagaggaaagagaaagccaag 518
>ref|XM_509803.1| PREDICTED: Pan troglodytes similar to ribosomal protein L13a; 60S ribosomal protein L13a; 23 kD highly basic protein (LOC452746), mRNA Length = 713 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacaccaa 109 |||||||||||||||||||||||||| Sbjct: 197 ttcctccgcaagcggatgaacaccaa 222 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 494 ctggaggagaagaggaaagagaaagccaag 523
>ref|XM_508935.1| PREDICTED: Pan troglodytes similar to ribosomal protein L13a; 60S ribosomal protein L13a; 23 kD highly basic protein (LOC451757), mRNA Length = 690 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 |||||||||||||| ||||||||||||||| Sbjct: 394 ctggaggagaagagaaaggagaaggccaag 423
>ref|XM_508036.1| PREDICTED: Pan troglodytes similar to ribosomal protein L13a; 60S ribosomal protein L13a; 23 kD highly basic protein (LOC450737), mRNA Length = 660 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacaccaa 109 |||||||||||||||||||||||||| Sbjct: 196 ttcctccgcaagcggatgaacaccaa 221 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaa 409 ||||||||||||||||| ||||| ||||| Sbjct: 493 ctggaggagaagaggaaagagaaagccaa 521
>gb|DQ216006.1| Taeniopygia guttata clone 0061P0024G09 ribosomal protein L13A-like mRNA, complete sequence Length = 786 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 |||||||||||| ||||||||||||||||| Sbjct: 470 ctggaggagaagcggaaggagaaggccaag 499 Score = 40.1 bits (20), Expect = 7.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 97 ggatgaacaccaagccgtcgcacggtcccatccacttccg 136 ||||||||||||| || |||| |||||| |||||||||| Sbjct: 186 ggatgaacaccaacccctcgcggggtcccttccacttccg 225
>gb|DQ216003.1| Taeniopygia guttata clone 0058P0045E08 ribosomal protein L13A-like mRNA, complete sequence Length = 801 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 |||||||||||| ||||||||||||||||| Sbjct: 499 ctggaggagaagcggaaggagaaggccaag 528
>gb|DQ216001.1| Taeniopygia guttata clone 0058P0049C02 ribosomal protein L13A-like mRNA, complete sequence Length = 801 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 |||||||||||| ||||||||||||||||| Sbjct: 499 ctggaggagaagcggaaggagaaggccaag 528
>ref|XM_527683.1| PREDICTED: Pan troglodytes similar to ribosomal protein L13a; 60S ribosomal protein L13a; 23 kD highly basic protein (LOC472308), mRNA Length = 612 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacaccaa 109 |||||||||||||||||||||||||| Sbjct: 169 ttcctccgcaagcggatgaacaccaa 194 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 466 ctggaggagaagaggaaagagaaagccaag 495
>ref|NM_012423.2| Homo sapiens ribosomal protein L13a (RPL13A), mRNA Length = 1142 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacaccaa 109 |||||||||||||||||||||||||| Sbjct: 191 ttcctccgcaagcggatgaacaccaa 216 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 488 ctggaggagaagaggaaagagaaagccaag 517
>ref|XM_526130.1| PREDICTED: Pan troglodytes similar to APG7 autophagy 7-like; ubiquitin activating enzyme E1-like protein (LOC470747), mRNA Length = 2091 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| |||||||||||| Sbjct: 198 ctggaggagaagaggaatgagaaggccaag 169
>gb|BC070223.1| Homo sapiens ribosomal protein L13a, mRNA (cDNA clone MGC:88204 IMAGE:6736442), complete cds Length = 1153 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacaccaa 109 |||||||||||||||||||||||||| Sbjct: 191 ttcctccgcaagcggatgaacaccaa 216 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 488 ctggaggagaagaggaaagagaaagccaag 517
>gb|BC065236.1| Homo sapiens ribosomal protein L13a, mRNA (cDNA clone MGC:70840 IMAGE:6161599), complete cds Length = 663 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacaccaa 109 |||||||||||||||||||||||||| Sbjct: 179 ttcctccgcaagcggatgaacaccaa 204 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 476 ctggaggagaagaggaaagagaaagccaag 505
>gb|BC000514.2| Homo sapiens ribosomal protein L13a, mRNA (cDNA clone MGC:8547 IMAGE:2822802), complete cds Length = 1125 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacaccaa 109 |||||||||||||||||||||||||| Sbjct: 174 ttcctccgcaagcggatgaacaccaa 199 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 471 ctggaggagaagaggaaagagaaagccaag 500
>ref|XM_533620.2| PREDICTED: Canis familiaris Ribosomal protein L13a (RPL13A), mRNA Length = 525 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 |||||||||||||||||| ||||||||||| Sbjct: 343 ctggaggagaagaggaagaagaaggccaag 372
>gb|AC146032.2| Pan troglodytes BAC clone RP43-14B10 from 7, complete sequence Length = 181694 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 84 ttcctccgcaagcggatgaacaccaa 109 |||||||||||||||||||||||||| Sbjct: 30189 ttcctccgcaagcggatgaacaccaa 30164 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Minus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 29892 ctggaggagaagaggaaagagaaagccaag 29863
>gb|BC013230.1| Homo sapiens ribosomal protein L13a, mRNA (cDNA clone IMAGE:3462928) Length = 658 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacaccaa 109 |||||||||||||||||||||||||| Sbjct: 167 ttcctccgcaagcggatgaacaccaa 192 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 464 ctggaggagaagaggaaagagaaagccaag 493
>gb|BC043976.1| Xenopus laevis ribosomal protein L13a, mRNA (cDNA clone MGC:54018 IMAGE:5571546), complete cds Length = 819 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 |||||||||||||| ||||||||||||||| Sbjct: 555 ctggaggagaagagaaaggagaaggccaag 584
>gb|BC004900.2| Homo sapiens ribosomal protein L13a, mRNA (cDNA clone IMAGE:3545758), partial cds Length = 1119 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacaccaa 109 |||||||||||||||||||||||||| Sbjct: 165 ttcctccgcaagcggatgaacaccaa 190 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 462 ctggaggagaagaggaaagagaaagccaag 491
>gb|BC071921.1| Homo sapiens cDNA clone IMAGE:6423605, **** WARNING: chimeric clone **** Length = 1357 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacaccaa 109 |||||||||||||||||||||||||| Sbjct: 840 ttcctccgcaagcggatgaacaccaa 865 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 1137 ctggaggagaagaggaaagagaaagccaag 1166
>gb|BC021568.1| Homo sapiens cDNA clone IMAGE:3343061, **** WARNING: chimeric clone **** Length = 2530 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacaccaa 109 |||||||||||||||||||||||||| Sbjct: 2045 ttcctccgcaagcggatgaacaccaa 2070 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 2341 ctggaggagaagaggaaagagaaagccaag 2370
>emb|BX000688.11| Human DNA sequence from clone DAQB-36F16 on chromosome 6 Contains the GPR53P pseudogene for G protein-coupled receptor 53, the OR2I1P pseudogene for olfactory receptor, family 2, subfamily I, member 1, the UBD gene for ubiquitin D, the OR2H5P pseudogene for olfactory receptor, family 2, subfamily H, member 5, the RPL13AP pseudogene for ribosomal protein L13a, the OR2H2 gene for olfactory receptor, family 2, subfamily H, member 2, the GABBR1 gene for gamma-aminobutyric acid (GABA) B receptor, 1, and 3 CpG islands, complete sequence Length = 102684 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 70 tgaagtacctccgcttcctccgcaagcggatgaacacc 107 |||||||||| |||| ||||||||||||||||||||| Sbjct: 50271 tgaagtacctgggctttctccgcaagcggatgaacacc 50308 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 388 agaagaggaaggagaaggccaag 410 ||||||||||||||||||||||| Sbjct: 50577 agaagaggaaggagaaggccaag 50599 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 386 ggagaagaggaaggagaaggccaag 410 ||||||||||||||||||| ||||| Sbjct: 49186 ggagaagaggaaggagaagaccaag 49210
>emb|AL662826.11| Human DNA sequence from clone XXbac-101I20 on chromosome 6 contains a MAS1 oncogene pseudogene, a olfactory receptor, family 2, subfamily I, member 1 pseudogene (OR2I1P, HS6M1-14P), the UBD gene for ubiquitin D (FAT10), a olfactory receptor, family 2, subfamily H, member 5 pseudogene (OR2H5P, HS6M1-13P), a 60S ribosomal protein L13A (RPL13A) pseudogene, the OR2H2 gene for olfactory receptor, family 2, subfamily H, member 2 (HS6M1-12), the GABBR1 gene for gamma-aminobutryic acid (GABA) B receptor, 1 (GPRC3A, GABABR1), the 5' end of the MOG gene for myelin oligodendrocyte protein and three CpG islands, complete sequence Length = 145431 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 70 tgaagtacctccgcttcctccgcaagcggatgaacacc 107 |||||||||| |||| ||||||||||||||||||||| Sbjct: 56692 tgaagtacctgggctttctccgcaagcggatgaacacc 56729 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 388 agaagaggaaggagaaggccaag 410 ||||||||||||||||||||||| Sbjct: 56998 agaagaggaaggagaaggccaag 57020 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 386 ggagaagaggaaggagaaggccaag 410 ||||||||||||||||||| ||||| Sbjct: 55607 ggagaagaggaaggagaagaccaag 55631
>emb|AL645936.5| Human DNA sequence from clone XXbac-126D10 on chromosome 6 contains the OR2H2 gene for olfactory receptor, family 2, subfamily H, member 2, the OR2I1P and OR2H5P pseudogenes for olfactory receptor, family 2, subfamily I, member 1 and subfamily H, member 5, the UBD gene for ubiquitin D, a 60S ribosomal protein L13A (RPL13A) pseudogene, the GABBR1 gene for gamma-aminobutyric acid (GABA) B receptor, 1, a SMT3 suppressor of mif two 3 homolog 1 (SMT3H1) pseudogene, the MOG gene for myelin oligodendrocyte glycoprotein, the gene for a novel KRAB box-containing C2H2 type zinc finger protein and four CpG islands, complete sequence Length = 155874 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 70 tgaagtacctccgcttcctccgcaagcggatgaacacc 107 |||||||||| |||| ||||||||||||||||||||| Sbjct: 33564 tgaagtacctgggctttctccgcaagcggatgaacacc 33601 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 388 agaagaggaaggagaaggccaag 410 ||||||||||||||||||||||| Sbjct: 33870 agaagaggaaggagaaggccaag 33892 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 386 ggagaagaggaaggagaaggccaag 410 ||||||||||||||||||| ||||| Sbjct: 32479 ggagaagaggaaggagaagaccaag 32503
>emb|AL358235.16| Human DNA sequence from clone RP11-196N24 on chromosome 10 Contains the 5' end of the gene for a novel protein (possible ortholog of mouse phosphoinositide-3-kinase adaptor protein 1 (Pik3ap1)), the ribosomal protein L13a pseudogene 5 (RPL13AP5) and a CpG island, complete sequence Length = 106506 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacaccaa 109 |||||||||||||||||||||||||| Sbjct: 81036 ttcctccgcaagcggatgaacaccaa 81061 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 81333 ctggaggagaagaggaaagagaaagccaag 81362
>emb|AL158163.11| Human DNA sequence from clone RP11-348N5 on chromosome 10 Contains the 3' end of the PDCD4 gene for programmed cell death 4 (neoplastic transformation inhibitor)(H731, MGC33046, MGC33047), a novel gene (LOC92482), the SHOC2 gene for soc-2 suppressor of clear homolog (C. elegans)(SOC2, SUR8, SOC-2, SUR-8, KIAA0862, SIAA0862), ribosomal protein L13a pseudogene 6 (RPL13AP6), the ADRA2A gene for adrenergic, alpha-2A-, receptor (alpha-2AAR subtype C10)(ADRA2, ADRAR, ZNF32, ADRA2R) and two CpG islands, complete sequence Length = 204908 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 84 ttcctccgcaagcggatgaacaccaa 109 |||||||||||||||||||||||||| Sbjct: 54593 ttcctccgcaagcggatgaacaccaa 54568 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 381 ctggaggagaagaggaaggagaaggccaa 409 ||||||||||||||||| ||||| ||||| Sbjct: 54296 ctggaggagaagaggaaagagaaagccaa 54268
>emb|Y09971.1|CPRPL13A C.paradoxa mRNA for ribosomal protein L13a Length = 710 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Plus Query: 171 ggcatgatcccgcacaagacgccccgcggcgaggctgcgctcgccaggctgaaggcgttc 230 ||||||||||| |||||||| |||||||||| || || || | |||||||||| ||| Sbjct: 269 ggcatgatcccccacaagaccccccgcggcgctgcggccctggagcggctgaaggccttc 328 Query: 231 gagggcgtcccgcc 244 |||||||| ||||| Sbjct: 329 gagggcgtgccgcc 342
>emb|X56932.1|HS23KDHBP H.sapiens mRNA for 23 kD highly basic protein Length = 672 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacaccaa 109 |||||||||||||||||||||||||| Sbjct: 186 ttcctccgcaagcggatgaacaccaa 211 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 483 ctggaggagaagaggaaagagaaagccaag 512
>emb|AJ843089.1| Platichthys flesus mRNA for 60S ribosomal protein L13A (rpl13A gene) Length = 686 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 |||||||||||||| ||||||||||||||| Sbjct: 493 ctggaggagaagagaaaggagaaggccaag 522
>emb|CR759766.5| Human DNA sequence from clone DAMA-BMC177C8 on chromosome 6, complete sequence Length = 127280 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 70 tgaagtacctccgcttcctccgcaagcggatgaacacc 107 |||||||||| |||| ||||||||||||||||||||| Sbjct: 28590 tgaagtacctgggctttctccgcaagcggatgaacacc 28627 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 388 agaagaggaaggagaaggccaag 410 ||||||||||||||||||||||| Sbjct: 28896 agaagaggaaggagaaggccaag 28918 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 386 ggagaagaggaaggagaaggccaag 410 ||||||||||||||||||| ||||| Sbjct: 27505 ggagaagaggaaggagaagaccaag 27529
>gb|BC067891.1| Homo sapiens cDNA clone MGC:87657 IMAGE:5271409, complete cds Length = 1488 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||||||||| |||||| Sbjct: 402 ctggaggagaagaggaaggagaaagccaag 431 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacaccaa 109 |||||| ||||||||||||||||||| Sbjct: 101 ttcctcggcaagcggatgaacaccaa 126
>emb|CR759870.6| Human DNA sequence from clone DADB-225M10 on chromosome 6, complete sequence Length = 57743 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 70 tgaagtacctccgcttcctccgcaagcggatgaacacc 107 |||||||||| |||| ||||||||||||||||||||| Sbjct: 5416 tgaagtacctgggctttctccgcaagcggatgaacacc 5453 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 388 agaagaggaaggagaaggccaag 410 ||||||||||||||||||||||| Sbjct: 5722 agaagaggaaggagaaggccaag 5744 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 386 ggagaagaggaaggagaaggccaag 410 ||||||||||||||||||| ||||| Sbjct: 4331 ggagaagaggaaggagaagaccaag 4355
>emb|CR788300.6| Human DNA sequence from clone DAAP-188P13 on chromosome 6, complete sequence Length = 78908 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 70 tgaagtacctccgcttcctccgcaagcggatgaacacc 107 |||||||||| |||| ||||||||||||||||||||| Sbjct: 53975 tgaagtacctgggctttctccgcaagcggatgaacacc 54012 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 388 agaagaggaaggagaaggccaag 410 ||||||||||||||||||||||| Sbjct: 54281 agaagaggaaggagaaggccaag 54303 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 386 ggagaagaggaaggagaaggccaag 410 ||||||||||||||||||| ||||| Sbjct: 52890 ggagaagaggaaggagaagaccaag 52914
>gb|AC092768.6| Homo sapiens chromosome 11, clone RP11-1149L18, complete sequence Length = 146364 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||||||||| |||||| Sbjct: 2946 ctggaggagaagaggaaggagaaagccaag 2917
>gb|BC103039.1| Bos taurus cDNA clone MGC:128198 IMAGE:7984430, complete cds Length = 679 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 |||||||||||||| ||||||||||||||| Sbjct: 489 ctggaggagaagagaaaggagaaggccaag 518 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 87 ctccgcaagcggatgaacaccaa 109 ||||||||||||||||||||||| Sbjct: 195 ctccgcaagcggatgaacaccaa 217
>emb|CR624659.1| full-length cDNA clone CS0DI065YH07 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1626 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacaccaa 109 |||||||||||||||||||||||||| Sbjct: 643 ttcctccgcaagcggatgaacaccaa 668 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 1484 ctggaggagaagaggaaagagaaagccaag 1513
>emb|CR625138.1| full-length cDNA clone CS0DI071YK05 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1078 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacaccaa 109 |||||||||||||||||||||||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaa 182 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 454 ctggaggagaagaggaaagagaaagccaag 483
>emb|CR623949.1| full-length cDNA clone CS0DE014YH06 of Placenta of Homo sapiens (human) Length = 1036 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacaccaa 109 |||||||||||||||||||||||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaa 182 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 454 ctggaggagaagaggaaagagaaagccaag 483
>emb|CR622930.1| full-length cDNA clone CS0DE004YD03 of Placenta of Homo sapiens (human) Length = 1093 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacaccaa 109 |||||||||||||||||||||||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaa 182 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 454 ctggaggagaagaggaaagagaaagccaag 483
>emb|CR622697.1| full-length cDNA clone CS0DL002YH12 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 649 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacaccaa 109 |||||||||||||||||||||||||| Sbjct: 180 ttcctccgcaagcggatgaacaccaa 205 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 477 ctggaggagaagaggaaagagaaagccaag 506
>emb|CR622347.1| full-length cDNA clone CS0DI069YJ19 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1084 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacaccaa 109 |||||||||||||||||||||||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaa 182 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 454 ctggaggagaagaggaaagagaaagccaag 483
>emb|CR622131.1| full-length cDNA clone CS0DI075YJ21 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1116 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacaccaa 109 |||||||||||||||||||||||||| Sbjct: 180 ttcctccgcaagcggatgaacaccaa 205 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 477 ctggaggagaagaggaaagagaaagccaag 506
>emb|CR619845.1| full-length cDNA clone CS0DI058YC16 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1049 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacaccaa 109 |||||||||||||||||||||||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaa 182 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 454 ctggaggagaagaggaaagagaaagccaag 483
>emb|CR620187.1| full-length cDNA clone CS0DE001YC16 of Placenta of Homo sapiens (human) Length = 626 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacaccaa 109 |||||||||||||||||||||||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaa 182 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 454 ctggaggagaagaggaaagagaaagccaag 483
>emb|CR618372.1| full-length cDNA clone CS0DD008YF03 of Neuroblastoma Cot 50-normalized of Homo sapiens (human) Length = 1093 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacaccaa 109 |||||||||||||||||||||||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaa 182 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 454 ctggaggagaagaggaaagagaaagccaag 483
>emb|CR618336.1| full-length cDNA clone CS0DC008YA18 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1084 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacaccaa 109 |||||||||||||||||||||||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaa 182 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 454 ctggaggagaagaggaaagagaaagccaag 483
>emb|CR618182.1| full-length cDNA clone CS0DG002YE04 of B cells (Ramos cell line) of Homo sapiens (human) Length = 1093 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacaccaa 109 |||||||||||||||||||||||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaa 182 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 454 ctggaggagaagaggaaagagaaagccaag 483
>emb|CR616905.1| full-length cDNA clone CS0DI065YB06 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1093 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacaccaa 109 |||||||||||||||||||||||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaa 182 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 454 ctggaggagaagaggaaagagaaagccaag 483
>emb|CR615101.1| full-length cDNA clone CS0DI074YD18 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1099 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacaccaa 109 |||||||||||||||||||||||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaa 182 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 454 ctggaggagaagaggaaagagaaagccaag 483
>emb|CR613935.1| full-length cDNA clone CS0DJ010YF15 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1093 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacaccaa 109 |||||||||||||||||||||||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaa 182 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 454 ctggaggagaagaggaaagagaaagccaag 483
>emb|CR612270.1| full-length cDNA clone CS0DI068YN06 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1048 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacaccaa 109 |||||||||||||||||||||||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaa 182 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 454 ctggaggagaagaggaaagagaaagccaag 483
>emb|CR613016.1| full-length cDNA clone CS0DI065YK06 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 626 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacaccaa 109 |||||||||||||||||||||||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaa 182 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 454 ctggaggagaagaggaaagagaaagccaag 483
>emb|CR607854.1| full-length cDNA clone CS0DI035YD15 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 649 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacaccaa 109 |||||||||||||||||||||||||| Sbjct: 180 ttcctccgcaagcggatgaacaccaa 205 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 477 ctggaggagaagaggaaagagaaagccaag 506
>emb|CR607799.1| full-length cDNA clone CS0DI067YC06 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1093 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacaccaa 109 |||||||||||||||||||||||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaa 182 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 454 ctggaggagaagaggaaagagaaagccaag 483
>emb|CR608676.1| full-length cDNA clone CS0CAP006YO09 of Thymus of Homo sapiens (human) Length = 628 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacaccaa 109 |||||||||||||||||||||||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaa 182 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 454 ctggaggagaagaggaaagagaaagccaag 483
>emb|CR607407.1| full-length cDNA clone CS0DI008YJ20 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1088 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacaccaa 109 |||||||||||||||||||||||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaa 182 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 454 ctggaggagaagaggaaagagaaagccaag 483
>emb|CR607352.1| full-length cDNA clone CS0DF034YJ13 of Fetal brain of Homo sapiens (human) Length = 1088 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacaccaa 109 |||||||||||||||||||||||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaa 182 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 454 ctggaggagaagaggaaagagaaagccaag 483
>emb|CR606179.1| full-length cDNA clone CS0DM013YA03 of Fetal liver of Homo sapiens (human) Length = 626 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacaccaa 109 |||||||||||||||||||||||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaa 182 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 454 ctggaggagaagaggaaagagaaagccaag 483
>emb|CR603453.1| full-length cDNA clone CS0DB008YK16 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 1083 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacaccaa 109 |||||||||||||||||||||||||| Sbjct: 147 ttcctccgcaagcggatgaacaccaa 172 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 444 ctggaggagaagaggaaagagaaagccaag 473
>emb|CR599383.1| full-length cDNA clone CS0DM006YN06 of Fetal liver of Homo sapiens (human) Length = 1093 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacaccaa 109 |||||||||||||||||||||||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaa 182 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 454 ctggaggagaagaggaaagagaaagccaag 483
>dbj|AK056837.1| Homo sapiens cDNA FLJ32275 fis, clone PROST2000053, moderately similar to 60S RIBOSOMAL PROTEIN L13A Length = 2315 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacaccaa 109 |||||||||||||||||||||||||| Sbjct: 677 ttcctccgcaagcggatgaacaccaa 702 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 1679 ctggaggagaagaggaaagagaaagccaag 1708
>emb|CR596607.1| full-length cDNA clone CS0DI029YH03 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1091 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacaccaa 109 |||||||||||||||||||||||||| Sbjct: 155 ttcctccgcaagcggatgaacaccaa 180 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 452 ctggaggagaagaggaaagagaaagccaag 481
>emb|CR595200.1| full-length cDNA clone CS0DI035YJ24 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 626 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacaccaa 109 |||||||||||||||||||||||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaa 182 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 454 ctggaggagaagaggaaagagaaagccaag 483
>gb|AC010619.7| Homo sapiens chromosome 19 clone CTD-3148I10, complete sequence Length = 179394 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacaccaa 109 |||||||||||||||||||||||||| Sbjct: 77660 ttcctccgcaagcggatgaacaccaa 77685 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 78659 ctggaggagaagaggaaagagaaagccaag 78688
>emb|CR592554.1| full-length cDNA clone CS0DC029YN07 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1093 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacaccaa 109 |||||||||||||||||||||||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaa 182 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 454 ctggaggagaagaggaaagagaaagccaag 483
>emb|CR591518.1| full-length cDNA clone CS0DB008YJ02 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 1069 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacaccaa 109 |||||||||||||||||||||||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaa 182 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 454 ctggaggagaagaggaaagagaaagccaag 483
>emb|CR591301.1| full-length cDNA clone CS0DL008YK19 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 1093 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacaccaa 109 |||||||||||||||||||||||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaa 182 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 454 ctggaggagaagaggaaagagaaagccaag 483
>gb|AC084878.12| Homo sapiens 12q BAC RP11-101K23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 135060 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||||||||||| |||| Sbjct: 77810 ctggaggagaagaggaaggagaaggtcaag 77781
>gb|AC098935.2| Homo sapiens chromosome 1 clone RP11-564A8, complete sequence Length = 192565 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 |||||||||||| ||||||||||||||||| Sbjct: 60112 ctggaggagaagtggaaggagaaggccaag 60141 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacaccaa 109 |||| ||||||||||||||||||||| Sbjct: 59816 ttcccccgcaagcggatgaacaccaa 59841
>ref|XM_931056.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 5 (LOC284821), mRNA Length = 1132 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 70 tgaagtacctccgcttcctccgcaagcggatgaacacc 107 |||||||||| | |||||||||||||||||||||||| Sbjct: 178 tgaagtacctgggtttcctccgcaagcggatgaacacc 215 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 488 ctggaggagaagaggaaagagaaagccaag 517
>ref|XM_931051.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 4 (LOC284821), mRNA Length = 679 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 70 tgaagtacctccgcttcctccgcaagcggatgaacacc 107 |||||||||| | |||||||||||||||||||||||| Sbjct: 178 tgaagtacctgggtttcctccgcaagcggatgaacacc 215 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 488 ctggaggagaagaggaaagagaaagccaag 517
>ref|XM_931046.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 3 (LOC284821), mRNA Length = 1050 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 70 tgaagtacctccgcttcctccgcaagcggatgaacacc 107 |||||||||| | |||||||||||||||||||||||| Sbjct: 96 tgaagtacctgggtttcctccgcaagcggatgaacacc 133 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 406 ctggaggagaagaggaaagagaaagccaag 435
>ref|XM_931040.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 2 (LOC284821), mRNA Length = 1067 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 70 tgaagtacctccgcttcctccgcaagcggatgaacacc 107 |||||||||| | |||||||||||||||||||||||| Sbjct: 177 tgaagtacctgggtttcctccgcaagcggatgaacacc 214 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 423 ctggaggagaagaggaaagagaaagccaag 452
>ref|XM_926157.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 1 (LOC284821), mRNA Length = 666 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 70 tgaagtacctccgcttcctccgcaagcggatgaacacc 107 |||||||||| | |||||||||||||||||||||||| Sbjct: 177 tgaagtacctgggtttcctccgcaagcggatgaacacc 214 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 487 ctggaggagaagaggaaagagaaagccaag 516
>ref|XM_936627.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a (LOC647572), mRNA Length = 1466 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||||||||| |||||| Sbjct: 401 ctggaggagaagaggaaggagaaagccaag 430 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacaccaa 109 |||||| ||||||||||||||||||| Sbjct: 100 ttcctcggcaagcggatgaacaccaa 125
>ref|XM_928691.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a (LOC645683), mRNA Length = 1466 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||||||||| |||||| Sbjct: 401 ctggaggagaagaggaaggagaaagccaag 430 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacaccaa 109 |||||| ||||||||||||||||||| Sbjct: 100 ttcctcggcaagcggatgaacaccaa 125
>ref|XM_945323.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 3 (LOC649250), mRNA Length = 655 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacaccaa 109 |||||||||||||||||||||||||| Sbjct: 190 ttcctccgcaagcggatgaacaccaa 215 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaa 409 ||||||||||||||||| ||||| ||||| Sbjct: 487 ctggaggagaagaggaaagagaaagccaa 515
>ref|XM_941634.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 1 (LOC649250), mRNA Length = 667 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacaccaa 109 |||||||||||||||||||||||||| Sbjct: 190 ttcctccgcaagcggatgaacaccaa 215 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaa 409 ||||||||||||||||| ||||| ||||| Sbjct: 487 ctggaggagaagaggaaagagaaagccaa 515
>ref|XM_945318.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 2 (LOC649250), mRNA Length = 575 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacaccaa 109 |||||||||||||||||||||||||| Sbjct: 185 ttcctccgcaagcggatgaacaccaa 210 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaa 409 ||||||||||||||||| ||||| ||||| Sbjct: 416 ctggaggagaagaggaaagagaaagccaa 444
>ref|XM_944191.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 5 (LOC648326), mRNA Length = 703 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacaccaa 109 |||||||||||||||||||||||||| Sbjct: 193 ttcctccgcaagcggatgaacaccaa 218 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 490 ctggaggagaagaggaaagagaaagccaag 519
>ref|XM_944188.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 4 (LOC648326), mRNA Length = 622 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacaccaa 109 |||||||||||||||||||||||||| Sbjct: 112 ttcctccgcaagcggatgaacaccaa 137 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 409 ctggaggagaagaggaaagagaaagccaag 438
>ref|XM_944185.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 3 (LOC648326), mRNA Length = 595 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacaccaa 109 |||||||||||||||||||||||||| Sbjct: 85 ttcctccgcaagcggatgaacaccaa 110 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 382 ctggaggagaagaggaaagagaaagccaag 411
>ref|XM_944181.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 2 (LOC648326), mRNA Length = 626 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacaccaa 109 |||||||||||||||||||||||||| Sbjct: 187 ttcctccgcaagcggatgaacaccaa 212 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 418 ctggaggagaagaggaaagagaaagccaag 447
>ref|XM_939484.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 1 (LOC648326), mRNA Length = 711 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacaccaa 109 |||||||||||||||||||||||||| Sbjct: 201 ttcctccgcaagcggatgaacaccaa 226 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 498 ctggaggagaagaggaaagagaaagccaag 527
>ref|XM_930133.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 1 (LOC644511), mRNA Length = 660 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacaccaa 109 |||||||||||||||||||||||||| Sbjct: 190 ttcctccgcaagcggatgaacaccaa 215 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaa 409 ||||||||||||||||| ||||| ||||| Sbjct: 487 ctggaggagaagaggaaagagaaagccaa 515
>ref|XM_934381.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 2 (LOC644511), mRNA Length = 575 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacaccaa 109 |||||||||||||||||||||||||| Sbjct: 185 ttcctccgcaagcggatgaacaccaa 210 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaa 409 ||||||||||||||||| ||||| ||||| Sbjct: 416 ctggaggagaagaggaaagagaaagccaa 444
>ref|XM_932924.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 5 (LOC283340), mRNA Length = 700 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacaccaa 109 |||||||||||||||||||||||||| Sbjct: 193 ttcctccgcaagcggatgaacaccaa 218 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 490 ctggaggagaagaggaaagagaaagccaag 519
>ref|XM_932919.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 4 (LOC283340), mRNA Length = 590 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacaccaa 109 |||||||||||||||||||||||||| Sbjct: 85 ttcctccgcaagcggatgaacaccaa 110 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 382 ctggaggagaagaggaaagagaaagccaag 411
>ref|XM_932916.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 3 (LOC283340), mRNA Length = 610 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacaccaa 109 |||||||||||||||||||||||||| Sbjct: 105 ttcctccgcaagcggatgaacaccaa 130 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 402 ctggaggagaagaggaaagagaaagccaag 431
>ref|XM_208072.6| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 1 (LOC283340), mRNA Length = 708 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacaccaa 109 |||||||||||||||||||||||||| Sbjct: 201 ttcctccgcaagcggatgaacaccaa 226 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 498 ctggaggagaagaggaaagagaaagccaag 527
>ref|XM_932910.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 2 (LOC283340), mRNA Length = 626 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacaccaa 109 |||||||||||||||||||||||||| Sbjct: 187 ttcctccgcaagcggatgaacaccaa 212 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 418 ctggaggagaagaggaaagagaaagccaag 447
>gb|BC105558.1| Bos taurus cDNA clone IMAGE:8120112, with apparent retained intron Length = 2007 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 |||||||||||||| ||||||||||||||| Sbjct: 1274 ctggaggagaagagaaaggagaaggccaag 1303 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 87 ctccgcaagcggatgaacaccaa 109 ||||||||||||||||||||||| Sbjct: 980 ctccgcaagcggatgaacaccaa 1002
>gb|AC006137.3|AC006137 Homo sapiens clone SCb-254N2 (UWGC:rg254N02) from 6p21, complete sequence Length = 129806 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 70 tgaagtacctccgcttcctccgcaagcggatgaacacc 107 |||||||||| |||| ||||||||||||||||||||| Sbjct: 74632 tgaagtacctgggctttctccgcaagcggatgaacacc 74595 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 388 agaagaggaaggagaaggccaag 410 ||||||||||||||||||||||| Sbjct: 74326 agaagaggaaggagaaggccaag 74304 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 386 ggagaagaggaaggagaaggccaag 410 ||||||||||||||||||| ||||| Sbjct: 75717 ggagaagaggaaggagaagaccaag 75693
>emb|BX927223.9| Human DNA sequence from clone DAMA-380P17 on chromosome 6, complete sequence Length = 83649 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 70 tgaagtacctccgcttcctccgcaagcggatgaacacc 107 |||||||||| |||| ||||||||||||||||||||| Sbjct: 76592 tgaagtacctgggctttctccgcaagcggatgaacacc 76629 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 388 agaagaggaaggagaaggccaag 410 ||||||||||||||||||||||| Sbjct: 76898 agaagaggaaggagaaggccaag 76920 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 386 ggagaagaggaaggagaaggccaag 410 ||||||||||||||||||| ||||| Sbjct: 75507 ggagaagaggaaggagaagaccaag 75531
>dbj|AB168305.1| Macaca fascicularis testis cDNA clone: QtsA-11103, similar to human ribosomal protein L13a (RPL13A), mRNA, RefSeq: NM_012423.2 Length = 680 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacaccaa 109 |||||||||||||||||||||||||| Sbjct: 191 ttcctccgcaagcggatgaacaccaa 216 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 382 tggaggagaagaggaaggagaaggccaag 410 |||||||||||||||||||||| |||||| Sbjct: 489 tggaggagaagaggaaggagaaagccaag 517
>ref|NG_002538.1| Homo sapiens ribosomal protein L13a pseudogene 2 (RPL13AP2) on chromosome 14 Length = 773 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 385 aggagaagaggaaggagaaggccaag 410 |||||||||||||||||||||||||| Sbjct: 505 aggagaagaggaaggagaaggccaag 530
>gb|AC018523.9|AC018523 Homo sapiens chromosome , clone RP11-140L24, complete sequence Length = 166507 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||||||||| |||||| Sbjct: 162328 ctggaggagaagaggaaggagaaagccaag 162299
>dbj|AK222747.1| Homo sapiens mRNA for ribosomal protein L13a variant, clone: DMC05308 Length = 630 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacaccaa 109 |||||||||||||||||||||||||| Sbjct: 171 ttcctccgcaagcggatgaacaccaa 196 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 468 ctggaggagaagaggaaagagaaagccaag 497
>dbj|BS000103.1| Pan troglodytes chromosome 22 clone:PTB-031J04, map 22, complete sequences Length = 164274 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacaccaa 109 |||||||||||||||||||||||||| Sbjct: 10861 ttcctccgcaagcggatgaacaccaa 10886 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 11177 ctggaggagaagaggaaagagaaagccaag 11206
>dbj|AK130605.1| Homo sapiens cDNA FLJ27095 fis, clone SPL04438, highly similar to 60S ribosomal protein L13A Length = 1125 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacaccaa 109 |||||||||||||||||||||||||| Sbjct: 192 ttcctccgcaagcggatgaacaccaa 217 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 489 ctggaggagaagaggaaagagaaagccaag 518
>gb|BC062537.1| Homo sapiens ribosomal protein L13a, mRNA (cDNA clone MGC:71249 IMAGE:4908022), complete cds Length = 1122 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacaccaa 109 |||||||||||||||||||||||||| Sbjct: 171 ttcctccgcaagcggatgaacaccaa 196 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 468 ctggaggagaagaggaaagagaaagccaag 497
>gb|BC071929.1| Homo sapiens ribosomal protein L13a, mRNA (cDNA clone MGC:88614 IMAGE:5808487), complete cds Length = 1126 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacaccaa 109 |||||||||||||||||||||||||| Sbjct: 175 ttcctccgcaagcggatgaacaccaa 200 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 472 ctggaggagaagaggaaagagaaagccaag 501
>emb|AL157792.3|CNS01RG7 Human chromosome 14 DNA sequence BAC R-388M7 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 194760 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 385 aggagaagaggaaggagaaggccaag 410 |||||||||||||||||||||||||| Sbjct: 115365 aggagaagaggaaggagaaggccaag 115340
>emb|AL355773.4|CNS05TCO Human chromosome 14 DNA sequence BAC R-813I20 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 216647 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||||||||| |||||| Sbjct: 124984 ctggaggagaagaggaaggagaaagccaag 124955 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 84 ttcctccgcaagcggatgaacaccaa 109 |||||| ||||||||||||||||||| Sbjct: 125285 ttcctcggcaagcggatgaacaccaa 125260
>dbj|AP001693.1| Homo sapiens genomic DNA, chromosome 21q, section 37/105 Length = 340000 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 70 tgaagtacctccgcttcctccgcaagcggatgaacacc 107 |||||||||| | |||||||||||||||||||||||| Sbjct: 108023 tgaagtacctgggtttcctccgcaagcggatgaacacc 108060 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 108333 ctggaggagaagaggaaagagaaagccaag 108362
>dbj|AB082924.1| Homo sapiens RPL13a mRNA for ribosomal protein L13a, complete cds Length = 974 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacaccaa 109 |||||||||||||||||||||||||| Sbjct: 24 ttcctccgcaagcggatgaacaccaa 49 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 321 ctggaggagaagaggaaagagaaagccaag 350
>emb|AL031983.2|HS271M21 Human DNA sequence from clone RP1-271M21 on chromosome 6p21.31-22.2 Contains a MAS1 oncogene pseudogene, the OR2H2 gene for olfactory receptor 2H2, olfactory receptor 2I1 and 2H5 pseudogenes OR2I1P and OR2H5P, the gene for diubiquitin, an RPL13A (60S Ribosomal Protein L13A) pseudogene, the GABBR1 gene for gamma-aminobutyric acid (GABA) B receptor 1 and an SMT3H1 or SMT3H2 (SMT3 (suppressor of mif two 3, yeast) homolog) pseudogene and three CpG islands, complete sequence Length = 134292 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 70 tgaagtacctccgcttcctccgcaagcggatgaacacc 107 |||||||||| |||| ||||||||||||||||||||| Sbjct: 78972 tgaagtacctgggctttctccgcaagcggatgaacacc 79009 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 388 agaagaggaaggagaaggccaag 410 ||||||||||||||||||||||| Sbjct: 79278 agaagaggaaggagaaggccaag 79300 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 386 ggagaagaggaaggagaaggccaag 410 ||||||||||||||||||| ||||| Sbjct: 77887 ggagaagaggaaggagaagaccaag 77911
>gb|BC032107.2| Homo sapiens ribosomal protein L13a, mRNA (cDNA clone IMAGE:4644246) Length = 1139 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacaccaa 109 |||||||||||||||||||||||||| Sbjct: 180 ttcctccgcaagcggatgaacaccaa 205 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 477 ctggaggagaagaggaaagagaaagccaag 506
>gb|BC001836.2| Homo sapiens ribosomal protein L13a, mRNA (cDNA clone MGC:4241 IMAGE:2961667), complete cds Length = 694 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacaccaa 109 |||||||||||||||||||||||||| Sbjct: 172 ttcctccgcaagcggatgaacaccaa 197 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 469 ctggaggagaagaggaaagagaaagccaag 498
>gb|BC001675.2| Homo sapiens ribosomal protein L13a, mRNA (cDNA clone MGC:2546 IMAGE:2961667), complete cds Length = 694 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacaccaa 109 |||||||||||||||||||||||||| Sbjct: 172 ttcctccgcaagcggatgaacaccaa 197 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 469 ctggaggagaagaggaaagagaaagccaag 498
>emb|X56933.1|BTAPAS B.taurus mRNA, alternative polyadenylation signals Length = 1101 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 |||||||||||||| ||||||||||||||| Sbjct: 464 ctggaggagaagagaaaggagaaggccaag 493 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 87 ctccgcaagcggatgaacaccaa 109 ||||||||||||||||||||||| Sbjct: 170 ctccgcaagcggatgaacaccaa 192
>dbj|AP001340.1| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2 clone:B2289H10, LL56-APP region, complete sequence Length = 58771 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 70 tgaagtacctccgcttcctccgcaagcggatgaacacc 107 |||||||||| | |||||||||||||||||||||||| Sbjct: 44832 tgaagtacctgggtttcctccgcaagcggatgaacacc 44869 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 45142 ctggaggagaagaggaaagagaaagccaag 45171
>dbj|AB028893.1| Homo sapiens RPL13A, U32, U33, U34, U35, RPS11, U35 genes for ribosomal protein L13a and S11, U32, U33, U34, U35, and U35 snoRNA, complete cds and sequence Length = 13208 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacaccaa 109 |||||||||||||||||||||||||| Sbjct: 3669 ttcctccgcaagcggatgaacaccaa 3694 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 4669 ctggaggagaagaggaaagagaaagccaag 4698
>ref|NM_001016486.2| Xenopus tropicalis hypothetical protein LOC549240 (LOC549240), mRNA Length = 771 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 382 tggaggagaagaggaaggagaaggccaag 410 ||||||||||||| ||||||||||||||| Sbjct: 556 tggaggagaagagaaaggagaaggccaag 584
>gb|AC006043.1| Homo sapiens BAC clone RP11-538D15 from 7, complete sequence Length = 189036 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 386 ggagaagaggaaggagaaggccaag 410 ||||||||||||||||||||||||| Sbjct: 115129 ggagaagaggaaggagaaggccaag 115153
>gb|AC025165.27| Homo sapiens 12 BAC RP11-571M6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 211544 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacacca 108 ||||||||||||||||||||||||| Sbjct: 68752 ttcctccgcaagcggatgaacacca 68776 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 |||||||||||| |||||||||| |||||| Sbjct: 69026 ctggaggagaaggggaaggagaaagccaag 69055
>emb|AL356120.10| Human DNA sequence from clone RP11-365K22 on chromosome 13 Contains a novel gene similar to ribosomal protein L13a (RPL13A), complete sequence Length = 83727 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 84 ttcctccgcaagcggatgaacacca 108 ||||||||||||||||||||||||| Sbjct: 13610 ttcctccgcaagcggatgaacacca 13586 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Minus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 13313 ctggaggagaagaggaaagagaaagccaag 13284
>emb|CR859183.1| Pongo pygmaeus mRNA; cDNA DKFZp469O181 (from clone DKFZp469O181) Length = 772 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacacca 108 ||||||||||||||||||||||||| Sbjct: 192 ttcctccgcaagcggatgaacacca 216 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 489 ctggaggagaagaggaaagagaaagccaag 518
>gb|DP000062.1| Sus scrofa target 117 genomic scaffold Length = 605739 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 386 ggagaagaggaaggagaaggccaag 410 ||||||||||||||||||||||||| Sbjct: 206939 ggagaagaggaaggagaaggccaag 206963 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 83 cttcctccgcaagcggatgaacac 106 |||| ||||||||||||||||||| Sbjct: 206657 cttcttccgcaagcggatgaacac 206680
>ref|XR_000921.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a; 60S ribosomal protein L13a; 23 kD highly basic protein, transcript variant 1 (LOC387930), misc RNA Length = 590 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacacca 108 ||||||||||||||||||||||||| Sbjct: 105 ttcctccgcaagcggatgaacacca 129 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 402 ctggaggagaagaggaaagagaaagccaag 431
>ref|XR_000922.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a; 60S ribosomal protein L13a; 23 kD highly basic protein, transcript variant 2 (LOC387930), misc RNA Length = 688 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacacca 108 ||||||||||||||||||||||||| Sbjct: 194 ttcctccgcaagcggatgaacacca 218 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 491 ctggaggagaagaggaaagagaaagccaag 520
>ref|XR_000923.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a; 60S ribosomal protein L13a; 23 kD highly basic protein, transcript variant 3 (LOC387930), misc RNA Length = 605 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacacca 108 ||||||||||||||||||||||||| Sbjct: 186 ttcctccgcaagcggatgaacacca 210 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 417 ctggaggagaagaggaaagagaaagccaag 446
>ref|NM_203308.1| Homo sapiens ribosomal protein L13A-like (MGC34774), mRNA Length = 1848 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 386 ggagaagaggaaggagaaggccaag 410 ||||||||||||||||||||||||| Sbjct: 1072 ggagaagaggaaggagaaggccaag 1096
>ref|XM_942899.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 3 (LOC642209), mRNA Length = 590 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacacca 108 ||||||||||||||||||||||||| Sbjct: 105 ttcctccgcaagcggatgaacacca 129 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 402 ctggaggagaagaggaaagagaaagccaag 431
>ref|XM_936630.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 1 (LOC642209), mRNA Length = 688 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacacca 108 ||||||||||||||||||||||||| Sbjct: 194 ttcctccgcaagcggatgaacacca 218 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 491 ctggaggagaagaggaaagagaaagccaag 520
>ref|XM_942891.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 2 (LOC642209), mRNA Length = 605 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacacca 108 ||||||||||||||||||||||||| Sbjct: 186 ttcctccgcaagcggatgaacacca 210 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 417 ctggaggagaagaggaaagagaaagccaag 446
>gb|AC148698.1| Macaca mulatta Major Histocompatibility Complex BAC MMU268P23, complete sequence Length = 185838 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 386 ggagaagaggaaggagaaggccaag 410 ||||||||||||||||||||||||| Sbjct: 9118 ggagaagaggaaggagaaggccaag 9142
>gb|AC148689.1| Macaca mulatta Major Histocompatibility Complex BAC MMU222I18, complete sequence Length = 174202 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 386 ggagaagaggaaggagaaggccaag 410 ||||||||||||||||||||||||| Sbjct: 106180 ggagaagaggaaggagaaggccaag 106204
>gb|BC027852.1| Homo sapiens ribosomal protein L13A-like, mRNA (cDNA clone MGC:34774 IMAGE:5207622), complete cds Length = 1848 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 386 ggagaagaggaaggagaaggccaag 410 ||||||||||||||||||||||||| Sbjct: 1072 ggagaagaggaaggagaaggccaag 1096
>emb|CR760846.2| Xenopus tropicalis finished cDNA, clone TTpA004d22 Length = 771 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 382 tggaggagaagaggaaggagaaggccaag 410 ||||||||||||| ||||||||||||||| Sbjct: 556 tggaggagaagagaaaggagaaggccaag 584
>gb|BC052385.1| Mus musculus chromodomain helicase DNA binding protein 1-like, mRNA (cDNA clone MGC:57944 IMAGE:5703859), complete cds Length = 3018 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Plus Query: 382 tggaggagaagaggaaggagaagg 405 |||||||||||||||||||||||| Sbjct: 1991 tggaggagaagaggaaggagaagg 2014
>ref|NM_026539.1| Mus musculus chromodomain helicase DNA binding protein 1-like (Chd1l), mRNA Length = 2991 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Plus Query: 382 tggaggagaagaggaaggagaagg 405 |||||||||||||||||||||||| Sbjct: 2009 tggaggagaagaggaaggagaagg 2032
>ref|XR_002787.1| PREDICTED: Mus musculus similar to ribosomal protein L13a (LOC624863), mRNA Length = 632 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaaggt 412 ||||||||||| ||||||||||||||||||| Sbjct: 486 ctggaggagaaacggaaggagaaggccaaggt 517
>ref|XR_004732.1| PREDICTED: Mus musculus similar to ribosomal protein L13a (LOC624863), mRNA Length = 632 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaaggt 412 ||||||||||| ||||||||||||||||||| Sbjct: 486 ctggaggagaaacggaaggagaaggccaaggt 517
>gb|AC130541.4| Mus musculus BAC clone RP24-124P9 from chromosome 3, complete sequence Length = 191814 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Minus Query: 382 tggaggagaagaggaaggagaagg 405 |||||||||||||||||||||||| Sbjct: 25583 tggaggagaagaggaaggagaagg 25560
>gb|BC020486.1| Mus musculus chromodomain helicase DNA binding protein 1-like, mRNA (cDNA clone IMAGE:3708149) Length = 1179 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Plus Query: 382 tggaggagaagaggaaggagaagg 405 |||||||||||||||||||||||| Sbjct: 179 tggaggagaagaggaaggagaagg 202
>gb|AC121768.2| Mus musculus BAC clone RP23-339H16 from 15, complete sequence Length = 199607 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Minus Query: 383 ggaggagaagaggaaggagaaggc 406 |||||||||||||||||||||||| Sbjct: 61017 ggaggagaagaggaaggagaaggc 60994
>gb|AC005099.2| Homo sapiens BAC clone CTA-351J1 from 7, complete sequence Length = 131611 Score = 48.1 bits (24), Expect = 0.031 Identities = 36/40 (90%) Strand = Plus / Plus Query: 70 tgaagtacctccgcttcctccgcaagcggatgaacaccaa 109 |||||||||| |||||||||||||| |||||||||||| Sbjct: 58387 tgaagtacctggtcttcctccgcaagcagatgaacaccaa 58426 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 385 aggagaagaggaaggagaaggccaag 410 ||||||||||||||||||| |||||| Sbjct: 58700 aggagaagaggaaggagaaagccaag 58725
>gb|BC057567.1| Mus musculus chromodomain helicase DNA binding protein 1-like, mRNA (cDNA clone MGC:66868 IMAGE:6415898), complete cds Length = 3037 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Plus Query: 382 tggaggagaagaggaaggagaagg 405 |||||||||||||||||||||||| Sbjct: 2020 tggaggagaagaggaaggagaagg 2043
>ref|XM_945533.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 8 (LOC649564), mRNA Length = 1112 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacacc 107 |||||||||||||||||||||||| Sbjct: 170 ttcctccgcaagcggatgaacacc 193 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 468 ctggaggagaagaggaaagagaaagccaag 497
>ref|XM_945532.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 7 (LOC649564), mRNA Length = 671 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacacc 107 |||||||||||||||||||||||| Sbjct: 192 ttcctccgcaagcggatgaacacc 215 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 490 ctggaggagaagaggaaagagaaagccaag 519
>ref|XM_945529.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 6 (LOC649564), mRNA Length = 681 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacacc 107 |||||||||||||||||||||||| Sbjct: 192 ttcctccgcaagcggatgaacacc 215 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 490 ctggaggagaagaggaaagagaaagccaag 519
>ref|XM_945527.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 5 (LOC649564), mRNA Length = 688 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacacc 107 |||||||||||||||||||||||| Sbjct: 192 ttcctccgcaagcggatgaacacc 215 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 490 ctggaggagaagaggaaagagaaagccaag 519
>ref|XM_945523.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 4 (LOC649564), mRNA Length = 1052 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacacc 107 |||||||||||||||||||||||| Sbjct: 110 ttcctccgcaagcggatgaacacc 133 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 408 ctggaggagaagaggaaagagaaagccaag 437
>ref|XM_945522.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 3 (LOC649564), mRNA Length = 1134 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacacc 107 |||||||||||||||||||||||| Sbjct: 192 ttcctccgcaagcggatgaacacc 215 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 490 ctggaggagaagaggaaagagaaagccaag 519
>ref|XM_941896.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 1 (LOC649564), mRNA Length = 668 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacacc 107 |||||||||||||||||||||||| Sbjct: 191 ttcctccgcaagcggatgaacacc 214 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 489 ctggaggagaagaggaaagagaaagccaag 518
>ref|XM_945517.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 2 (LOC649564), mRNA Length = 1067 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacacc 107 |||||||||||||||||||||||| Sbjct: 191 ttcctccgcaagcggatgaacacc 214 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 423 ctggaggagaagaggaaagagaaagccaag 452
>dbj|AK165656.1| Mus musculus kidney CCL-142 RAG cDNA, RIKEN full-length enriched library, clone:G430108O15 product:chromodomain helicase DNA binding protein 1-like, full insert sequence Length = 2716 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Plus Query: 382 tggaggagaagaggaaggagaagg 405 |||||||||||||||||||||||| Sbjct: 2034 tggaggagaagaggaaggagaagg 2057
>gb|AC121357.14| Mus musculus chromosome 15, clone RP23-56D7, complete sequence Length = 177867 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 381 ctggaggagaagaggaaggagaaggccaaggt 412 ||||||||||| ||||||||||||||||||| Sbjct: 124074 ctggaggagaaacggaaggagaaggccaaggt 124043
>dbj|AK014473.1| Mus musculus 14 days embryo liver cDNA, RIKEN full-length enriched library, clone:4432404A22 product:CDNA FLJ10480 FIS, CLONE NT2RP2000126, WEAKLY SIMILAR TO POSSIBLE GLOBAL TRANSCRIPTION ACTIVATOR SNF2L (FRAGMENT) homolog [Homo sapiens], full insert sequence Length = 2991 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Plus Query: 382 tggaggagaagaggaaggagaagg 405 |||||||||||||||||||||||| Sbjct: 2009 tggaggagaagaggaaggagaagg 2032
>gb|AC140839.9| Mus musculus chromosome 3, clone RP24-316D12, complete sequence Length = 168722 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Plus Query: 382 tggaggagaagaggaaggagaagg 405 |||||||||||||||||||||||| Sbjct: 69045 tggaggagaagaggaaggagaagg 69068
>gb|BC062966.1| Mus musculus chromodomain helicase DNA binding protein 1-like, mRNA (cDNA clone MGC:64788 IMAGE:6415898), complete cds Length = 3066 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Plus Query: 382 tggaggagaagaggaaggagaagg 405 |||||||||||||||||||||||| Sbjct: 2020 tggaggagaagaggaaggagaagg 2043
>gb|BC047855.1| Danio rerio ribosomal protein L13a, mRNA (cDNA clone MGC:56275 IMAGE:5602342), complete cds Length = 819 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 380 actggaggagaagaggaaggagaaggccaag 410 ||||||||||||||| ||||| ||||||||| Sbjct: 574 actggaggagaagagaaaggaaaaggccaag 604
>ref|XM_848715.1| PREDICTED: Canis familiaris similar to IQ motif containing D (LOC611081), mRNA Length = 1574 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 385 aggagaagaggaaggagaaggccaagg 411 |||||||| |||||||||||||||||| Sbjct: 1397 aggagaaggggaaggagaaggccaagg 1423
>gb|AC132349.3| Mus musculus BAC clone RP24-82B7 from chromosome 16, complete sequence Length = 216783 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 383 ggaggagaagaggaaggagaagg 405 ||||||||||||||||||||||| Sbjct: 49288 ggaggagaagaggaaggagaagg 49266
>emb|AL627070.16| Mouse DNA sequence from clone RP23-353E13 on chromosome 11 Contains a glyceraldehyde-3-phosphate dehydrogenase (Gapd) pseudogene, wo novel genes and a CpG island, complete sequence Length = 210813 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 383 ggaggagaagaggaaggagaagg 405 ||||||||||||||||||||||| Sbjct: 102390 ggaggagaagaggaaggagaagg 102368
>gb|AC114791.3| Homo sapiens BAC clone RP11-658B24 from 4, complete sequence Length = 113268 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 383 ggaggagaagaggaaggagaagg 405 ||||||||||||||||||||||| Sbjct: 96705 ggaggagaagaggaaggagaagg 96683
>gb|AC104306.2| Homo sapiens chromosome 3 clone RP11-524O15, complete sequence Length = 197110 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 383 ggaggagaagaggaaggagaagg 405 ||||||||||||||||||||||| Sbjct: 131071 ggaggagaagaggaaggagaagg 131049
>ref|XM_703004.1| PREDICTED: Danio rerio similar to Ribosomal protein L13a, transcript variant 2 (LOC560828), mRNA Length = 1065 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 380 actggaggagaagaggaaggagaaggccaag 410 ||||||||||||||| ||||| ||||||||| Sbjct: 568 actggaggagaagagaaaggaaaaggccaag 598
>ref|XM_680687.1| PREDICTED: Danio rerio similar to Ribosomal protein L13a, transcript variant 1 (LOC560828), mRNA Length = 774 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 380 actggaggagaagaggaaggagaaggccaag 410 ||||||||||||||| ||||| ||||||||| Sbjct: 568 actggaggagaagagaaaggaaaaggccaag 598
>gb|AC026384.19|AC026384 Mus musculus 11 BAC RP23-390D17 (Roswell Park Cancer Institute Mouse BAC Library) complete sequence Length = 177428 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 383 ggaggagaagaggaaggagaagg 405 ||||||||||||||||||||||| Sbjct: 20046 ggaggagaagaggaaggagaagg 20024
>emb|BX005435.16| Zebrafish DNA sequence from clone CH211-154E15 in linkage group 17, complete sequence Length = 166247 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 380 actggaggagaagaggaaggagaaggccaag 410 ||||||||||||||| ||||| ||||||||| Sbjct: 20917 actggaggagaagagaaaggaaaaggccaag 20887
>gb|AC147314.4| Pan troglodytes BAC clone RP43-50A6 from chromosome 7, complete sequence Length = 176459 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 83 cttcctccgcaagcggatgaacaccaa 109 |||||||||||||| |||||||||||| Sbjct: 90261 cttcctccgcaagcagatgaacaccaa 90287 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 385 aggagaagaggaaggagaaggccaag 410 ||||||||||||||||||| |||||| Sbjct: 90555 aggagaagaggaaggagaaagccaag 90580
>gb|AC140306.3| Mus musculus BAC clone RP23-386L13 from 8, complete sequence Length = 220059 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 383 ggaggagaagaggaaggagaagg 405 ||||||||||||||||||||||| Sbjct: 18594 ggaggagaagaggaaggagaagg 18616
>emb|CR626962.9| Zebrafish DNA sequence from clone CH211-15D5 in linkage group 17, complete sequence Length = 117015 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 380 actggaggagaagaggaaggagaaggccaag 410 ||||||||||||||| ||||| ||||||||| Sbjct: 3354 actggaggagaagagaaaggaaaaggccaag 3384
>ref|NM_212784.1| Danio rerio ribosomal protein L13a (rpl13a), mRNA Length = 819 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 380 actggaggagaagaggaaggagaaggccaag 410 ||||||||||||||| ||||| ||||||||| Sbjct: 574 actggaggagaagagaaaggaaaaggccaag 604
>ref|XM_520754.1| PREDICTED: Pan troglodytes similar to ribosomal protein L13a; 60S ribosomal protein L13a; 23 kD highly basic protein (LOC465300), mRNA Length = 680 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 488 ctggaggagaagaggaaagagaaagccaag 517 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaaca 105 |||||||||||||||||||||| Sbjct: 191 ttcctccgcaagcggatgaaca 212
>gb|DQ216005.1| Taeniopygia guttata clone 0058P0011D10 ribosomal protein L13A-like mRNA, complete sequence Length = 798 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggc 406 |||||||||||| ||||||||||||| Sbjct: 504 ctggaggagaagcggaaggagaaggc 529
>gb|DQ216004.1| Taeniopygia guttata clone 0058P0006F05 ribosomal protein L13A-like mRNA, complete sequence Length = 804 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggc 406 |||||||||||| ||||||||||||| Sbjct: 504 ctggaggagaagcggaaggagaaggc 529
>gb|DQ216002.1| Taeniopygia guttata clone 0058P0010A09 ribosomal protein L13A-like mRNA, complete sequence Length = 739 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggc 406 |||||||||||| ||||||||||||| Sbjct: 444 ctggaggagaagcggaaggagaaggc 469
>gb|DQ216000.1| Taeniopygia guttata clone 0058P0016A02 ribosomal protein L13A-like mRNA, complete sequence Length = 799 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggc 406 |||||||||||| ||||||||||||| Sbjct: 504 ctggaggagaagcggaaggagaaggc 529
>ref|XM_866179.1| PREDICTED: Bos taurus similar to ribosomal protein L13a (LOC614617), mRNA Length = 911 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 88 tccgcaagcggatgaacaccaa 109 |||||||||||||||||||||| Sbjct: 308 tccgcaagcggatgaacaccaa 329
>gb|AC145993.3| Pan troglodytes BAC clone RP43-178E21 from 7, complete sequence Length = 176561 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 |||| ||||||||||| ||||||||||||| Sbjct: 93537 ctgggggagaagaggacggagaaggccaag 93566
>gb|DQ084040.1| Oxyuranus scutellatus 60S ribosomal protein L13a mRNA, partial cds Length = 664 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 84 ttcctccgcaagcggatgaacaccaa 109 |||||||||||||| ||||||||||| Sbjct: 118 ttcctccgcaagcgtatgaacaccaa 143
>ref|XR_002869.1| PREDICTED: Mus musculus similar to 60S ribosomal protein L13a (Transplantation antigen P198) (Tum-P198 antigen) (LOC547166), mRNA Length = 631 Score = 44.1 bits (22), Expect = 0.48 Identities = 37/42 (88%) Strand = Plus / Plus Query: 150 attttctggcgcaccgtgcgcggcatgatcccgcacaagacg 191 |||||||||||||| ||||| |||||| | || ||||||||| Sbjct: 235 attttctggcgcactgtgcgaggcatgctgccccacaagacg 276
>gb|AC183838.2| Pan troglodytes BAC clone CH251-11K10 from chromosome 7, complete sequence Length = 153555 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 379 aactggaggagaagaggaaggagaag 404 |||||||||||| ||||||||||||| Sbjct: 11869 aactggaggagaggaggaaggagaag 11844
>gb|AC004845.2| Homo sapiens PAC clone RP4-635O5 from 7, complete sequence Length = 69847 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 379 aactggaggagaagaggaaggagaag 404 |||||||||||| ||||||||||||| Sbjct: 14173 aactggaggagaggaggaaggagaag 14148
>gb|AC142289.1| Pan troglodytes BAC clone RP43-179F19 from 7, complete sequence Length = 182617 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Minus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 |||| ||||||||||| ||||||||||||| Sbjct: 57591 ctgggggagaagaggacggagaaggccaag 57562
>gb|AC007688.15| Homo sapiens 12 BAC RPCI11-392P7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 161577 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 84 ttcctccgcaagcggatgaaca 105 |||||||||||||||||||||| Sbjct: 131727 ttcctccgcaagcggatgaaca 131706 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Minus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||||||||||||||| ||||| |||||| Sbjct: 131430 ctggaggagaagaggaaagagaaagccaag 131401
>gb|AC093286.3| Homo sapiens chromosome 5 clone RP11-456A14, complete sequence Length = 145047 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 84 ttcctccgcaagcggatgaacaccaa 109 ||||||| |||||||||||||||||| Sbjct: 9206 ttcctccacaagcggatgaacaccaa 9181
>gb|AC026477.3| Homo sapiens chromosome 5 clone RP11-94D20, complete sequence Length = 70380 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Minus Query: 381 ctggaggagaagaggaaggagaaggccaag 410 ||||| |||||||| ||||||||||||||| Sbjct: 48885 ctggaagagaagagtaaggagaaggccaag 48856
>gb|AC152396.4| Mus musculus chromosome 18, clone RP23-175I15, complete sequence Length = 185947 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 383 ggaggagaagaggaaggagaag 404 |||||||||||||||||||||| Sbjct: 32318 ggaggagaagaggaaggagaag 32339
>gb|AC010811.20| Homo sapiens chromosome 11, clone RP11-3E17, complete sequence Length = 149205 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 384 gaggagaagaggaaggagaagg 405 |||||||||||||||||||||| Sbjct: 9455 gaggagaagaggaaggagaagg 9434
>gb|AC182639.3| Pan troglodytes BAC clone CH251-322N11 from chromosome 7, complete sequence Length = 162580 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 379 aactggaggagaagaggaaggagaag 404 |||||||||||| ||||||||||||| Sbjct: 134520 aactggaggagaggaggaaggagaag 134495 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,250,502 Number of Sequences: 3902068 Number of extensions: 4250502 Number of successful extensions: 117471 Number of sequences better than 10.0: 506 Number of HSP's better than 10.0 without gapping: 506 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 115715 Number of HSP's gapped (non-prelim): 1723 length of query: 555 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 532 effective length of database: 17,143,297,704 effective search space: 9120234378528 effective search space used: 9120234378528 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)