>ELK3_HUMAN (P41970) ETS domain-containing protein Elk-3 (ETS-related protein|
           NET) (ETS-related protein ERP) (SRF accessory protein 2)
           (SAP-2)
          Length = 407

 Score = 32.7 bits (73), Expect = 0.58
 Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 4/93 (4%)
 Frame = +2

Query: 236 ASASTSISCRTSL*VHPHASS----SVVRRRMPSTALRASSAAEVDSNLRVEAHCHDSNL 403
           A  ++S+S + S  + P+A+S    S    R PS + ++   +E  S L +EA CHDS+ 
Sbjct: 212 AFLASSVSAKISSLMLPNAASISSASPFSSRSPSLSPKSPLPSEHRS-LFLEAACHDSDS 270

Query: 404 CEPFF*SAFSRVKETSWMKSMIASPMPRGVPVS 502
            EP   S+ S+ K  S       +  P+G+ +S
Sbjct: 271 LEPLNLSSGSKTKSPSLPPK---AKKPKGLEIS 300

>G7AC_BREDI (Q9L5D6) Glutaryl-7-aminocephalosporanic-acid acylase precursor (EC|
           3.5.1.93) (Glutaryl-7-ACA-acylase)
           (7-beta-(4-carboxybutanamido)cephalosporanic acid
           acylase)
          Length = 720

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
 Frame = +1

Query: 142 DSLSAGLSIEIPLHPKCCSPEF*AVIDVVAAGECLHLHQLQNLL-VSAPACLFQCGSSQD 318
           D+ +AG++     +P   SPE   V+ V  A    H H+L N L V++P      G   D
Sbjct: 134 DAFAAGINAYAQQNPDDISPEVRQVLPVSGADVVAHAHRLMNFLYVASPGRTLGEGDPPD 193

Query: 319 AVD-GTTSFIRRRGR 360
             D G+ S+    G+
Sbjct: 194 LADQGSNSWAVAPGK 208

>DDX28_MOUSE (Q9CWT6) Probable ATP-dependent RNA helicase DDX28 (EC 3.6.1.-)|
           (Mitochondrial DEAD box protein 28)
          Length = 540

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = -2

Query: 251 RWRHSPAATTSMTAQNSGEQHFGCSGISIERPALRE-SSRG 132
           RW  +P A+     + S + HF    +  E PALR  SSRG
Sbjct: 86  RWERAPLASRGWKHRRSRQDHFSIERVQQEAPALRNLSSRG 126

>7B4C_PSEU7 (P07662) 7-beta-(4-carboxybutanamido)cephalosporanic acid acylase|
           precursor (EC 3.5.1.-) (GL-7ACA acylase) [Contains:
           7-beta-(4-carboxybutanamido)cephalosporanic acid
           acylase; 7-beta-(4-carboxybutanamido)cephalosporanic
           acid acylase small subu
          Length = 311

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
 Frame = +1

Query: 142 DSLSAGLSIEIPLHPKCCSPEF*AVIDVVAAGECLHLHQLQNLL-VSAPACLFQCGSSQD 318
           D+ +AG++     +P   SP+   V+ V  A    H H+L N L V++P      G   D
Sbjct: 134 DAFAAGINAYAQQNPDDISPDVRQVLPVSGADVVAHAHRLMNFLYVASPGRTLGEGDPPD 193

Query: 319 AVD-GTTSFIRRRGR 360
             D G+ S+    G+
Sbjct: 194 LADQGSNSWAVAPGK 208

>TILS_RHOBA (Q7UNE1) tRNA(Ile)-lysidine synthase (EC 6.3.4.-)|
           (tRNA(Ile)-lysidine synthetase)
           (tRNA(Ile)-2-lysyl-cytidine synthase)
          Length = 397

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 10/84 (11%)
 Frame = -1

Query: 315 LRRTTLEEAC---GCTHKEVLQLMEVEALAGGHH-IDDSSKLRRAAFRVQRDLDREACTQ 148
           +RR   E A    GC +  V    + +A    HH I  +  L  A      +LD +   +
Sbjct: 139 IRRDFFERAAKQHGCRYVAVAHSADDQAETMLHHFIRGTGPLGLAGIAEASELDTDIVVR 198

Query: 147 RILARVRRDTAR------GSCWQE 94
           R L +VRRDT R      G  W+E
Sbjct: 199 RPLLQVRRDTLRDGLREIGQPWRE 222

>NXSB_LATLA (P10459) Short neurotoxin B precursor|
          Length = 83

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 15/49 (30%), Positives = 20/49 (40%)
 Frame = -2

Query: 407 RKDSNHDSGPPLSGLNLPRRRMKLVVPSTASCDEPHWKRHAGALTRRFC 261
           R+  NH S  P +  + P        P   SC    W+ H G +T R C
Sbjct: 22  RRCFNHPSSQPQTNKSCP--------PGENSCYNKQWRDHRGTITERGC 62

>NXS3_LATLA (Q9YGC4) Short neurotoxin OKI-01/OKI-19 precursor|
          Length = 83

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 15/49 (30%), Positives = 20/49 (40%)
 Frame = -2

Query: 407 RKDSNHDSGPPLSGLNLPRRRMKLVVPSTASCDEPHWKRHAGALTRRFC 261
           R+  NH S  P +  + P        P   SC    W+ H G +T R C
Sbjct: 22  RRCFNHPSSQPQTNKSCP--------PGENSCYNKQWRDHRGTITERGC 62

>LTBP3_MOUSE (Q61810) Latent transforming growth factor beta-binding protein 3|
            precursor (LTBP-3)
          Length = 1268

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
 Frame = +1

Query: 70   CGCIPVAQFLPARSSSSIP---SNPREDSLSAGLSIE 171
            C C P A++ PA++   IP   S P+ D   AG S E
Sbjct: 1055 CACTPPAEYSPAQAQCLIPERWSTPQRDVKCAGASEE 1091

>FLAE_VIBPA (Q9ZBA2) Polar flagellin E|
          Length = 374

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
 Frame = -1

Query: 387 QWASTLRFESTSAADEARSAVDGILRRTTLEEACGCTHK--EVLQLME---VEALAGGHH 223
           Q ++TL  ++       R+A D      T E   G  H+  ++LQ +    ++A  G H 
Sbjct: 48  QISNTLHVQTRGIDVALRNAHDAYSVAQTAE---GALHESSDILQRLRSLGLQAANGSHE 104

Query: 222 IDDSSKLRRAAFRVQRDLDREACT 151
            DD   L++    +Q +LDR A T
Sbjct: 105 QDDRKSLQQEVIALQDELDRVAIT 128

>DNMT1_ARATH (P34881) DNA (cytosine-5)-methyltransferase AthI (EC 2.1.1.37) (DNA|
           methyltransferase AthI) (DNA Metase AthI) (M.AthI)
          Length = 1534

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 25/82 (30%), Positives = 40/82 (48%)
 Frame = -1

Query: 351 AADEARSAVDGILRRTTLEEACGCTHKEVLQLMEVEALAGGHHIDDSSKLRRAAFRVQRD 172
           A  E  S +D  L+R     + G   KEV Q+ E EAL     +D +   RR A  +Q +
Sbjct: 265 ALREKSSKIDKPLQRER-NPSNGVRIKEVSQVAESEALTSDQLVDGTDDDRRYAILLQDE 323

Query: 171 LDREACTQRILARVRRDTARGS 106
            +R++  Q      R++++ GS
Sbjct: 324 ENRKSMQQ-----PRKNSSSGS 340

>EGSA_METKA (Q8TW08) Glycerol-1-phosphate dehydrogenase [NAD(P)] (EC 1.1.1.261)|
           (sn-glycerol-1-phosphate dehydrogenase) (G-1-P
           dehydrogenase) (Enantiomeric glycerophosphate synthase)
          Length = 353

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
 Frame = -2

Query: 203 SGEQHFGCSGISI--ERPALRESSRGLEGILLEDLAGKNW 90
           SG +H     + +  ERPAL     G+  I++E L G NW
Sbjct: 249 SGSEHLFSHALDVIAERPALHGEQCGVGTIIMEYLHGGNW 288

>CBIO4_LACPL (Q88ZZ2) Putative cobalt import ATP-binding protein cbiO 4|
          Length = 566

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 8/64 (12%)
 Frame = -1

Query: 480 IGLAIILFIHEVSFTLENALQKNGSQRFES*QWASTL--------RFESTSAADEARSAV 325
           +GL ++    +++F+LEN  Q   + R  + QWA TL        R +  S   + R A+
Sbjct: 100 VGLTVV---EDMAFSLENDQQTQPAMRQATEQWAQTLDLQDLLTHRPQELSGGQKQRVAM 156

Query: 324 DGIL 313
            G+L
Sbjct: 157 AGVL 160

>ELK3_MOUSE (P41971) ETS domain-containing protein Elk-3 (ETS-related protein|
           NET) (ETS-related protein ERP)
          Length = 409

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
 Frame = +2

Query: 236 ASASTSISCRTSL*VHPHASS----SVVRRRMPSTALRASSAAEVDSNLRVEAHCHDSNL 403
           A  ++S+S + S  + P+A+S    S    R PS +  +   +E  S L +EA CH+S+ 
Sbjct: 214 AFLASSVSAKISSLMLPNAASVSSASPSSSRSPSLSPDSPLPSEHRS-LFLEAACHESDS 272

Query: 404 CEPFF*SAFSRVKETSWMKSMIASPMPRGVPVS 502
            EP   S+ S+ K  S          P+G+ +S
Sbjct: 273 LEPLNLSSGSKTKSPSLPPK---GKKPKGLEIS 302


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,134,405
Number of Sequences: 219361
Number of extensions: 1503981
Number of successful extensions: 5055
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 4795
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5055
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3696665728
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)