ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags13d11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_467674.1| Oryza sativa (japonica cultivar-group), mRNA 500 e-138
2dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 500 e-138
3dbj|AP004880.3| Oryza sativa (japonica cultivar-group) genomic D... 500 e-138
4dbj|AK121498.1| Oryza sativa (japonica cultivar-group) cDNA clon... 500 e-138
5gb|AY112432.1| Zea mays CL3692_1 mRNA sequence 103 8e-19
6gb|AC026596.9| Homo sapiens chromosome 8, clone RP11-380O15, com... 50 0.010
7gb|AC092817.2| Homo sapiens chromosome 8, clone RP11-240B13, com... 50 0.010
8gb|AC006576.15| Homo sapiens Chromosome 12p13.3 BAC Clone 762c12... 44 0.61
9gb|AC005904.19| Homo sapiens 12 PAC RP4-751H1 (Roswell Park Canc... 44 0.61
10gb|M25857.1|HUMVWFA30 Human von Willebrand factor gene, exon 38 44 0.61
11gb|AC102672.13| Mus musculus chromosome 14, clone RP23-181E7, co... 42 2.4
12ref|XM_969780.1| PREDICTED: Tribolium castaneum similar to trans... 42 2.4
13gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete g... 42 2.4
14emb|AL671917.8| Mouse DNA sequence from clone RP23-217I18 on chr... 42 2.4
15gb|AC132345.4| Mus musculus BAC clone RP24-177P9 from chromosome... 40 9.5
16gb|AC132418.3| Mus musculus BAC clone RP23-251N2 from chromosome... 40 9.5
17emb|CR848726.6| Zebrafish DNA sequence from clone CH211-244M8 in... 40 9.5
18gb|AC123849.3| Mus musculus BAC clone RP23-460B12 from chromosom... 40 9.5
19ref|XM_764617.1| Giardia lamblia ATCC 50803 hypothetical protein... 40 9.5
20gb|AC113528.8| Mus musculus chromosome 18, clone RP23-419F17, co... 40 9.5
21emb|AL109924.20|HSDJ495K2 Human DNA sequence from clone RP3-495K... 40 9.5
22gb|AC004668.1| Homo sapiens BAC clone CTA-276O3 from 7, complete... 40 9.5
23gb|AC008323.3|AC008323 Drosophila melanogaster, chromosome 2L, r... 40 9.5
24gb|AE010301.1| Leptospira interrogans serovar Lai str. 56601 chr... 40 9.5
25gb|AE003579.3| Drosophila melanogaster chromosome 2L, section 12... 40 9.5
26gb|AC153821.6| Mus musculus 10 BAC RP23-193A14 (Roswell Park Can... 40 9.5
27gb|AE016824.1| Leptospira interrogans serovar Copenhageni str. F... 40 9.5
28gb|AF075068.1|HUMYQ04C07 Homo sapiens full length insert cDNA YQ... 40 9.5

>ref|XM_467674.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 4558

 Score =  500 bits (252), Expect = e-138
 Identities = 507/592 (85%)
 Strand = Plus / Plus

                                                                        
Query: 79   atgatacaatatatctccaccgatcatcttctgttgcccaaactccaccagagtttgtag 138
            |||||||||||||||| |||||||||||||||||||| | || | ||||||| |||||||
Sbjct: 3373 atgatacaatatatctacaccgatcatcttctgttgcacgaattgcaccagaatttgtag 3432

                                                                        
Query: 139  tttactcggaactactaaatacaaagagaccgtacatccatggtgtgaccagtgtaaagc 198
            ||||||||||||||||  ||||||||||| | || || |||||||| |||||||||||||
Sbjct: 3433 tttactcggaactacttcatacaaagagatcatatatgcatggtgtaaccagtgtaaagc 3492

                                                                        
Query: 199  ctggatggcttttcaaatatgctagttccctctgcaccttctcagcgccactggaagatc 258
            | |||||| |||| |||||||||||||| || || || ||||| || ||| |||||||||
Sbjct: 3493 caggatggattttgaaatatgctagttctctttgtacattctctgcaccattggaagatc 3552

                                                                        
Query: 259  caaaaccctattacgaacctcagaatgaccaggtctactgttatgttagtcccatctttt 318
            ||||||| |||||||||||||| || ||||| ||||||||||||||||| ||||||||||
Sbjct: 3553 caaaaccttattacgaacctcaaaaggaccaagtctactgttatgttagccccatctttt 3612

                                                                        
Query: 319  ctagacataattggcagcttccgctgcacagtttacccatcgaagaccccaccagacggt 378
            || | |||||||||||||||||  |||| |||||||| ||  | ||   |||||  ||||
Sbjct: 3613 ctcggcataattggcagcttccattgcatagtttacctatacaggatggcaccaatcggt 3672

                                                                        
Query: 379  tgcaggtatttgcatgggctttgctgaaaggggatgtcttgccatgtctaagggtggttc 438
            |||||||||||||||| |||||||| ||||| ||||||||||||||||| | |||  |||
Sbjct: 3673 tgcaggtatttgcatgtgctttgcttaaaggagatgtcttgccatgtcttaaggttattc 3732

                                                                        
Query: 439  aaaagttcctggctctgtcaccgtctgctgtccttgggcctgccagccaaagaagagttg 498
            | ||||||||||| |||||||| |||| | |||| |||||||  ||||||||||||||||
Sbjct: 3733 agaagttcctggcactgtcaccatctgttctcctagggcctgttagccaaagaagagttg 3792

                                                                        
Query: 499  gagatcttcttagcaggatgaagattggtggaaaattaaaagatagccggagagcattaa 558
            | |||||||||  ||||||||||||||||  ||| |||| ||||||||||  ||||||||
Sbjct: 3793 gtgatcttcttgacaggatgaagattggttcaaagttaatagatagccgggcagcattaa 3852

                                                                        
Query: 559  gagatgcatggagtagtgatccagattttctttatcctgagattcaggcatggatacagg 618
            ||||||  |||| |  | |||||||||||||||||||||||||  | |||||||| || |
Sbjct: 3853 gagatgtgtggaattttaatccagattttctttatcctgagataaaagcatggattcaag 3912

                                                                
Query: 619  ataaatataagagtcagtttgaagcaatatgggaacaaatgcaccaagaagt 670
            |||||| | | || || |||| |||||||||||||||||||||  |||||||
Sbjct: 3913 ataaatttcatagccattttggagcaatatgggaacaaatgcataaagaagt 3964



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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  500 bits (252), Expect = e-138
 Identities = 507/592 (85%)
 Strand = Plus / Plus

                                                                            
Query: 79       atgatacaatatatctccaccgatcatcttctgttgcccaaactccaccagagtttgtag 138
                |||||||||||||||| |||||||||||||||||||| | || | ||||||| |||||||
Sbjct: 30779797 atgatacaatatatctacaccgatcatcttctgttgcacgaattgcaccagaatttgtag 30779856

                                                                            
Query: 139      tttactcggaactactaaatacaaagagaccgtacatccatggtgtgaccagtgtaaagc 198
                ||||||||||||||||  ||||||||||| | || || |||||||| |||||||||||||
Sbjct: 30779857 tttactcggaactacttcatacaaagagatcatatatgcatggtgtaaccagtgtaaagc 30779916

                                                                            
Query: 199      ctggatggcttttcaaatatgctagttccctctgcaccttctcagcgccactggaagatc 258
                | |||||| |||| |||||||||||||| || || || ||||| || ||| |||||||||
Sbjct: 30779917 caggatggattttgaaatatgctagttctctttgtacattctctgcaccattggaagatc 30779976

                                                                            
Query: 259      caaaaccctattacgaacctcagaatgaccaggtctactgttatgttagtcccatctttt 318
                ||||||| |||||||||||||| || ||||| ||||||||||||||||| ||||||||||
Sbjct: 30779977 caaaaccttattacgaacctcaaaaggaccaagtctactgttatgttagccccatctttt 30780036

                                                                            
Query: 319      ctagacataattggcagcttccgctgcacagtttacccatcgaagaccccaccagacggt 378
                || | |||||||||||||||||  |||| |||||||| ||  | ||   |||||  ||||
Sbjct: 30780037 ctcggcataattggcagcttccattgcatagtttacctatacaggatggcaccaatcggt 30780096

                                                                            
Query: 379      tgcaggtatttgcatgggctttgctgaaaggggatgtcttgccatgtctaagggtggttc 438
                |||||||||||||||| |||||||| ||||| ||||||||||||||||| | |||  |||
Sbjct: 30780097 tgcaggtatttgcatgtgctttgcttaaaggagatgtcttgccatgtcttaaggttattc 30780156

                                                                            
Query: 439      aaaagttcctggctctgtcaccgtctgctgtccttgggcctgccagccaaagaagagttg 498
                | ||||||||||| |||||||| |||| | |||| |||||||  ||||||||||||||||
Sbjct: 30780157 agaagttcctggcactgtcaccatctgttctcctagggcctgttagccaaagaagagttg 30780216

                                                                            
Query: 499      gagatcttcttagcaggatgaagattggtggaaaattaaaagatagccggagagcattaa 558
                | |||||||||  ||||||||||||||||  ||| |||| ||||||||||  ||||||||
Sbjct: 30780217 gtgatcttcttgacaggatgaagattggttcaaagttaatagatagccgggcagcattaa 30780276

                                                                            
Query: 559      gagatgcatggagtagtgatccagattttctttatcctgagattcaggcatggatacagg 618
                ||||||  |||| |  | |||||||||||||||||||||||||  | |||||||| || |
Sbjct: 30780277 gagatgtgtggaattttaatccagattttctttatcctgagataaaagcatggattcaag 30780336

                                                                    
Query: 619      ataaatataagagtcagtttgaagcaatatgggaacaaatgcaccaagaagt 670
                |||||| | | || || |||| |||||||||||||||||||||  |||||||
Sbjct: 30780337 ataaatttcatagccattttggagcaatatgggaacaaatgcataaagaagt 30780388



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>dbj|AP004880.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0487D09
          Length = 161531

 Score =  500 bits (252), Expect = e-138
 Identities = 507/592 (85%)
 Strand = Plus / Plus

                                                                          
Query: 79     atgatacaatatatctccaccgatcatcttctgttgcccaaactccaccagagtttgtag 138
              |||||||||||||||| |||||||||||||||||||| | || | ||||||| |||||||
Sbjct: 119944 atgatacaatatatctacaccgatcatcttctgttgcacgaattgcaccagaatttgtag 120003

                                                                          
Query: 139    tttactcggaactactaaatacaaagagaccgtacatccatggtgtgaccagtgtaaagc 198
              ||||||||||||||||  ||||||||||| | || || |||||||| |||||||||||||
Sbjct: 120004 tttactcggaactacttcatacaaagagatcatatatgcatggtgtaaccagtgtaaagc 120063

                                                                          
Query: 199    ctggatggcttttcaaatatgctagttccctctgcaccttctcagcgccactggaagatc 258
              | |||||| |||| |||||||||||||| || || || ||||| || ||| |||||||||
Sbjct: 120064 caggatggattttgaaatatgctagttctctttgtacattctctgcaccattggaagatc 120123

                                                                          
Query: 259    caaaaccctattacgaacctcagaatgaccaggtctactgttatgttagtcccatctttt 318
              ||||||| |||||||||||||| || ||||| ||||||||||||||||| ||||||||||
Sbjct: 120124 caaaaccttattacgaacctcaaaaggaccaagtctactgttatgttagccccatctttt 120183

                                                                          
Query: 319    ctagacataattggcagcttccgctgcacagtttacccatcgaagaccccaccagacggt 378
              || | |||||||||||||||||  |||| |||||||| ||  | ||   |||||  ||||
Sbjct: 120184 ctcggcataattggcagcttccattgcatagtttacctatacaggatggcaccaatcggt 120243

                                                                          
Query: 379    tgcaggtatttgcatgggctttgctgaaaggggatgtcttgccatgtctaagggtggttc 438
              |||||||||||||||| |||||||| ||||| ||||||||||||||||| | |||  |||
Sbjct: 120244 tgcaggtatttgcatgtgctttgcttaaaggagatgtcttgccatgtcttaaggttattc 120303

                                                                          
Query: 439    aaaagttcctggctctgtcaccgtctgctgtccttgggcctgccagccaaagaagagttg 498
              | ||||||||||| |||||||| |||| | |||| |||||||  ||||||||||||||||
Sbjct: 120304 agaagttcctggcactgtcaccatctgttctcctagggcctgttagccaaagaagagttg 120363

                                                                          
Query: 499    gagatcttcttagcaggatgaagattggtggaaaattaaaagatagccggagagcattaa 558
              | |||||||||  ||||||||||||||||  ||| |||| ||||||||||  ||||||||
Sbjct: 120364 gtgatcttcttgacaggatgaagattggttcaaagttaatagatagccgggcagcattaa 120423

                                                                          
Query: 559    gagatgcatggagtagtgatccagattttctttatcctgagattcaggcatggatacagg 618
              ||||||  |||| |  | |||||||||||||||||||||||||  | |||||||| || |
Sbjct: 120424 gagatgtgtggaattttaatccagattttctttatcctgagataaaagcatggattcaag 120483

                                                                  
Query: 619    ataaatataagagtcagtttgaagcaatatgggaacaaatgcaccaagaagt 670
              |||||| | | || || |||| |||||||||||||||||||||  |||||||
Sbjct: 120484 ataaatttcatagccattttggagcaatatgggaacaaatgcataaagaagt 120535



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>dbj|AK121498.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033009M20, full
            insert sequence
          Length = 4559

 Score =  500 bits (252), Expect = e-138
 Identities = 507/592 (85%)
 Strand = Plus / Plus

                                                                        
Query: 79   atgatacaatatatctccaccgatcatcttctgttgcccaaactccaccagagtttgtag 138
            |||||||||||||||| |||||||||||||||||||| | || | ||||||| |||||||
Sbjct: 3374 atgatacaatatatctacaccgatcatcttctgttgcacgaattgcaccagaatttgtag 3433

                                                                        
Query: 139  tttactcggaactactaaatacaaagagaccgtacatccatggtgtgaccagtgtaaagc 198
            ||||||||||||||||  ||||||||||| | || || |||||||| |||||||||||||
Sbjct: 3434 tttactcggaactacttcatacaaagagatcatatatgcatggtgtaaccagtgtaaagc 3493

                                                                        
Query: 199  ctggatggcttttcaaatatgctagttccctctgcaccttctcagcgccactggaagatc 258
            | |||||| |||| |||||||||||||| || || || ||||| || ||| |||||||||
Sbjct: 3494 caggatggattttgaaatatgctagttctctttgtacattctctgcaccattggaagatc 3553

                                                                        
Query: 259  caaaaccctattacgaacctcagaatgaccaggtctactgttatgttagtcccatctttt 318
            ||||||| |||||||||||||| || ||||| ||||||||||||||||| ||||||||||
Sbjct: 3554 caaaaccttattacgaacctcaaaaggaccaagtctactgttatgttagccccatctttt 3613

                                                                        
Query: 319  ctagacataattggcagcttccgctgcacagtttacccatcgaagaccccaccagacggt 378
            || | |||||||||||||||||  |||| |||||||| ||  | ||   |||||  ||||
Sbjct: 3614 ctcggcataattggcagcttccattgcatagtttacctatacaggatggcaccaatcggt 3673

                                                                        
Query: 379  tgcaggtatttgcatgggctttgctgaaaggggatgtcttgccatgtctaagggtggttc 438
            |||||||||||||||| |||||||| ||||| ||||||||||||||||| | |||  |||
Sbjct: 3674 tgcaggtatttgcatgtgctttgcttaaaggagatgtcttgccatgtcttaaggttattc 3733

                                                                        
Query: 439  aaaagttcctggctctgtcaccgtctgctgtccttgggcctgccagccaaagaagagttg 498
            | ||||||||||| |||||||| |||| | |||| |||||||  ||||||||||||||||
Sbjct: 3734 agaagttcctggcactgtcaccatctgttctcctagggcctgttagccaaagaagagttg 3793

                                                                        
Query: 499  gagatcttcttagcaggatgaagattggtggaaaattaaaagatagccggagagcattaa 558
            | |||||||||  ||||||||||||||||  ||| |||| ||||||||||  ||||||||
Sbjct: 3794 gtgatcttcttgacaggatgaagattggttcaaagttaatagatagccgggcagcattaa 3853

                                                                        
Query: 559  gagatgcatggagtagtgatccagattttctttatcctgagattcaggcatggatacagg 618
            ||||||  |||| |  | |||||||||||||||||||||||||  | |||||||| || |
Sbjct: 3854 gagatgtgtggaattttaatccagattttctttatcctgagataaaagcatggattcaag 3913

                                                                
Query: 619  ataaatataagagtcagtttgaagcaatatgggaacaaatgcaccaagaagt 670
            |||||| | | || || |||| |||||||||||||||||||||  |||||||
Sbjct: 3914 ataaatttcatagccattttggagcaatatgggaacaaatgcataaagaagt 3965



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>gb|AY112432.1| Zea mays CL3692_1 mRNA sequence
          Length = 617

 Score =  103 bits (52), Expect = 8e-19
 Identities = 163/200 (81%)
 Strand = Plus / Minus

                                                                       
Query: 324 cataattggcagcttccgctgcacagtttacccatcgaagaccccaccagacggttgcag 383
           ||||| |||||||||||  ||||||||||||| ||| |||||    | || ||| |||||
Sbjct: 617 cataactggcagcttccattgcacagtttacctatcaaagacggtgcgagccggctgcag 558

                                                                       
Query: 384 gtatttgcatgggctttgctgaaaggggatgtcttgccatgtctaagggtggttcaaaag 443
           || |||||||| || ||||| |||||||| ||| ||||||||||| |||  |   |  | 
Sbjct: 557 gtgtttgcatgcgcgttgcttaaaggggacgtcctgccatgtctacgggacgccaaggat 498

                                                                       
Query: 444 ttcctggctctgtcaccgtctgctgtccttgggcctgccagccaaagaagagttggagat 503
           ||||| ||  ||||||| |||||||| || ||||||||||| ||| | ||||| ||||||
Sbjct: 497 ttcctcgcgttgtcaccatctgctgtgctcgggcctgccaggcaacggagagtgggagat 438

                               
Query: 504 cttcttagcaggatgaagat 523
           ||||||||||||||||||||
Sbjct: 437 cttcttagcaggatgaagat 418



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>gb|AC026596.9| Homo sapiens chromosome 8, clone RP11-380O15, complete sequence
          Length = 165158

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                      
Query: 621   aaatataagagtcagtttgaagcaa 645
             |||||||||||||||||||||||||
Sbjct: 50350 aaatataagagtcagtttgaagcaa 50374



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>gb|AC092817.2| Homo sapiens chromosome 8, clone RP11-240B13, complete sequence
          Length = 168719

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                      
Query: 621   aaatataagagtcagtttgaagcaa 645
             |||||||||||||||||||||||||
Sbjct: 95947 aaatataagagtcagtttgaagcaa 95923



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>gb|AC006576.15| Homo sapiens Chromosome 12p13.3 BAC Clone 762c12, complete sequence
          Length = 116840

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 513   aggatgaagattggtggaaaat 534
             ||||||||||||||||||||||
Sbjct: 28794 aggatgaagattggtggaaaat 28773



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>gb|AC005904.19| Homo sapiens 12 PAC RP4-751H1 (Roswell Park Cancer Institute Human PAC
             Library) complete sequence
          Length = 65139

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 513   aggatgaagattggtggaaaat 534
             ||||||||||||||||||||||
Sbjct: 46544 aggatgaagattggtggaaaat 46523



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>gb|M25857.1|HUMVWFA30 Human von Willebrand factor gene, exon 38
          Length = 457

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 513 aggatgaagattggtggaaaat 534
           ||||||||||||||||||||||
Sbjct: 87  aggatgaagattggtggaaaat 108



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>gb|AC102672.13| Mus musculus chromosome 14, clone RP23-181E7, complete sequence
          Length = 208396

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 387   tttgcatgggctttgctgaaa 407
             |||||||||||||||||||||
Sbjct: 95863 tttgcatgggctttgctgaaa 95843



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>ref|XM_969780.1| PREDICTED: Tribolium castaneum similar to transcriptional
            co-repressor Sin3A (LOC663745), mRNA
          Length = 4134

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 40   gaaaggttcgagctggacgtt 60
            |||||||||||||||||||||
Sbjct: 1996 gaaaggttcgagctggacgtt 2016



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>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome
          Length = 6260361

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 578     tccagattttctttatcctga 598
               |||||||||||||||||||||
Sbjct: 2386866 tccagattttctttatcctga 2386846



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>emb|AL671917.8| Mouse DNA sequence from clone RP23-217I18 on chromosome 3, complete
              sequence
          Length = 172826

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 405    aaaggggatgtcttgccatgt 425
              |||||||||||||||||||||
Sbjct: 114674 aaaggggatgtcttgccatgt 114694



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>gb|AC132345.4| Mus musculus BAC clone RP24-177P9 from chromosome 9, complete sequence
          Length = 183638

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 390    gcatgggctttgctgaaagg 409
              ||||||||||||||||||||
Sbjct: 132728 gcatgggctttgctgaaagg 132709



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>gb|AC132418.3| Mus musculus BAC clone RP23-251N2 from chromosome 18, complete sequence
          Length = 206588

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 518    gaagattggtggaaaattaaaaga 541
              |||||||||||||||| |||||||
Sbjct: 109714 gaagattggtggaaaaataaaaga 109737



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>emb|CR848726.6| Zebrafish DNA sequence from clone CH211-244M8 in linkage group 2,
              complete sequence
          Length = 155408

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 577    atccagattttctttatcct 596
              ||||||||||||||||||||
Sbjct: 102451 atccagattttctttatcct 102470



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>gb|AC123849.3| Mus musculus BAC clone RP23-460B12 from chromosome 16, complete
             sequence
          Length = 172697

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 200   tggatggcttttcaaatatg 219
             ||||||||||||||||||||
Sbjct: 44713 tggatggcttttcaaatatg 44732



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>ref|XM_764617.1| Giardia lamblia ATCC 50803 hypothetical protein (GLP_203_5876_29392)
             partial mRNA
          Length = 23517

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 215   atatgctagttccctctgca 234
             ||||||||||||||||||||
Sbjct: 14717 atatgctagttccctctgca 14736



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>gb|AC113528.8| Mus musculus chromosome 18, clone RP23-419F17, complete sequence
          Length = 217309

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 91    atctccaccgatcatcttct 110
             ||||||||||||||||||||
Sbjct: 44077 atctccaccgatcatcttct 44058



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>emb|AL109924.20|HSDJ495K2 Human DNA sequence from clone RP3-495K2 on chromosome 6q26-27 Contains
             three novel genes and two CpG islands, complete sequence
          Length = 130296

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 408   ggggatgtcttgccatgtctaagg 431
             |||||||||| |||||||||||||
Sbjct: 46456 ggggatgtctggccatgtctaagg 46479



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>gb|AC004668.1| Homo sapiens BAC clone CTA-276O3 from 7, complete sequence
          Length = 112661

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 221   tagttccctctgcaccttct 240
             ||||||||||||||||||||
Sbjct: 57892 tagttccctctgcaccttct 57911



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>gb|AC008323.3|AC008323 Drosophila melanogaster, chromosome 2L, region 24D-24D, BAC clone
             BACR03G07, complete sequence
          Length = 170064

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 516   atgaagattggtggaaaattaaaa 539
             ||||||||||||| ||||||||||
Sbjct: 82887 atgaagattggtgaaaaattaaaa 82864



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>gb|AE010301.1| Leptospira interrogans serovar Lai str. 56601 chromosome II, complete
            sequence
          Length = 358943

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 144  tcggaactactaaatacaaa 163
            ||||||||||||||||||||
Sbjct: 3813 tcggaactactaaatacaaa 3794



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>gb|AE003579.3| Drosophila melanogaster chromosome 2L, section 12 of 83 of the complete
              sequence
          Length = 304674

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 516    atgaagattggtggaaaattaaaa 539
              ||||||||||||| ||||||||||
Sbjct: 106104 atgaagattggtgaaaaattaaaa 106081



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>gb|AC153821.6| Mus musculus 10 BAC RP23-193A14 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 204618

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 437    tcaaaagttcctggctctgt 456
              ||||||||||||||||||||
Sbjct: 110330 tcaaaagttcctggctctgt 110349



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>gb|AE016824.1| Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130,
            chromosome II, complete sequence
          Length = 350181

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 144  tcggaactactaaatacaaa 163
            ||||||||||||||||||||
Sbjct: 3811 tcggaactactaaatacaaa 3792



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>gb|AF075068.1|HUMYQ04C07 Homo sapiens full length insert cDNA YQ04C07
          Length = 670

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 408 ggggatgtcttgccatgtctaagg 431
           |||||||||| |||||||||||||
Sbjct: 564 ggggatgtctggccatgtctaagg 587


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,900,458
Number of Sequences: 3902068
Number of extensions: 6900458
Number of successful extensions: 138255
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 138131
Number of HSP's gapped (non-prelim): 119
length of query: 696
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 673
effective length of database: 17,143,297,704
effective search space: 11537439354792
effective search space used: 11537439354792
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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