| Clone Name | bags13d11 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_467674.1| Oryza sativa (japonica cultivar-group), mRNA Length = 4558 Score = 500 bits (252), Expect = e-138 Identities = 507/592 (85%) Strand = Plus / Plus Query: 79 atgatacaatatatctccaccgatcatcttctgttgcccaaactccaccagagtttgtag 138 |||||||||||||||| |||||||||||||||||||| | || | ||||||| ||||||| Sbjct: 3373 atgatacaatatatctacaccgatcatcttctgttgcacgaattgcaccagaatttgtag 3432 Query: 139 tttactcggaactactaaatacaaagagaccgtacatccatggtgtgaccagtgtaaagc 198 |||||||||||||||| ||||||||||| | || || |||||||| ||||||||||||| Sbjct: 3433 tttactcggaactacttcatacaaagagatcatatatgcatggtgtaaccagtgtaaagc 3492 Query: 199 ctggatggcttttcaaatatgctagttccctctgcaccttctcagcgccactggaagatc 258 | |||||| |||| |||||||||||||| || || || ||||| || ||| ||||||||| Sbjct: 3493 caggatggattttgaaatatgctagttctctttgtacattctctgcaccattggaagatc 3552 Query: 259 caaaaccctattacgaacctcagaatgaccaggtctactgttatgttagtcccatctttt 318 ||||||| |||||||||||||| || ||||| ||||||||||||||||| |||||||||| Sbjct: 3553 caaaaccttattacgaacctcaaaaggaccaagtctactgttatgttagccccatctttt 3612 Query: 319 ctagacataattggcagcttccgctgcacagtttacccatcgaagaccccaccagacggt 378 || | ||||||||||||||||| |||| |||||||| || | || ||||| |||| Sbjct: 3613 ctcggcataattggcagcttccattgcatagtttacctatacaggatggcaccaatcggt 3672 Query: 379 tgcaggtatttgcatgggctttgctgaaaggggatgtcttgccatgtctaagggtggttc 438 |||||||||||||||| |||||||| ||||| ||||||||||||||||| | ||| ||| Sbjct: 3673 tgcaggtatttgcatgtgctttgcttaaaggagatgtcttgccatgtcttaaggttattc 3732 Query: 439 aaaagttcctggctctgtcaccgtctgctgtccttgggcctgccagccaaagaagagttg 498 | ||||||||||| |||||||| |||| | |||| ||||||| |||||||||||||||| Sbjct: 3733 agaagttcctggcactgtcaccatctgttctcctagggcctgttagccaaagaagagttg 3792 Query: 499 gagatcttcttagcaggatgaagattggtggaaaattaaaagatagccggagagcattaa 558 | ||||||||| |||||||||||||||| ||| |||| |||||||||| |||||||| Sbjct: 3793 gtgatcttcttgacaggatgaagattggttcaaagttaatagatagccgggcagcattaa 3852 Query: 559 gagatgcatggagtagtgatccagattttctttatcctgagattcaggcatggatacagg 618 |||||| |||| | | ||||||||||||||||||||||||| | |||||||| || | Sbjct: 3853 gagatgtgtggaattttaatccagattttctttatcctgagataaaagcatggattcaag 3912 Query: 619 ataaatataagagtcagtttgaagcaatatgggaacaaatgcaccaagaagt 670 |||||| | | || || |||| ||||||||||||||||||||| ||||||| Sbjct: 3913 ataaatttcatagccattttggagcaatatgggaacaaatgcataaagaagt 3964
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 500 bits (252), Expect = e-138 Identities = 507/592 (85%) Strand = Plus / Plus Query: 79 atgatacaatatatctccaccgatcatcttctgttgcccaaactccaccagagtttgtag 138 |||||||||||||||| |||||||||||||||||||| | || | ||||||| ||||||| Sbjct: 30779797 atgatacaatatatctacaccgatcatcttctgttgcacgaattgcaccagaatttgtag 30779856 Query: 139 tttactcggaactactaaatacaaagagaccgtacatccatggtgtgaccagtgtaaagc 198 |||||||||||||||| ||||||||||| | || || |||||||| ||||||||||||| Sbjct: 30779857 tttactcggaactacttcatacaaagagatcatatatgcatggtgtaaccagtgtaaagc 30779916 Query: 199 ctggatggcttttcaaatatgctagttccctctgcaccttctcagcgccactggaagatc 258 | |||||| |||| |||||||||||||| || || || ||||| || ||| ||||||||| Sbjct: 30779917 caggatggattttgaaatatgctagttctctttgtacattctctgcaccattggaagatc 30779976 Query: 259 caaaaccctattacgaacctcagaatgaccaggtctactgttatgttagtcccatctttt 318 ||||||| |||||||||||||| || ||||| ||||||||||||||||| |||||||||| Sbjct: 30779977 caaaaccttattacgaacctcaaaaggaccaagtctactgttatgttagccccatctttt 30780036 Query: 319 ctagacataattggcagcttccgctgcacagtttacccatcgaagaccccaccagacggt 378 || | ||||||||||||||||| |||| |||||||| || | || ||||| |||| Sbjct: 30780037 ctcggcataattggcagcttccattgcatagtttacctatacaggatggcaccaatcggt 30780096 Query: 379 tgcaggtatttgcatgggctttgctgaaaggggatgtcttgccatgtctaagggtggttc 438 |||||||||||||||| |||||||| ||||| ||||||||||||||||| | ||| ||| Sbjct: 30780097 tgcaggtatttgcatgtgctttgcttaaaggagatgtcttgccatgtcttaaggttattc 30780156 Query: 439 aaaagttcctggctctgtcaccgtctgctgtccttgggcctgccagccaaagaagagttg 498 | ||||||||||| |||||||| |||| | |||| ||||||| |||||||||||||||| Sbjct: 30780157 agaagttcctggcactgtcaccatctgttctcctagggcctgttagccaaagaagagttg 30780216 Query: 499 gagatcttcttagcaggatgaagattggtggaaaattaaaagatagccggagagcattaa 558 | ||||||||| |||||||||||||||| ||| |||| |||||||||| |||||||| Sbjct: 30780217 gtgatcttcttgacaggatgaagattggttcaaagttaatagatagccgggcagcattaa 30780276 Query: 559 gagatgcatggagtagtgatccagattttctttatcctgagattcaggcatggatacagg 618 |||||| |||| | | ||||||||||||||||||||||||| | |||||||| || | Sbjct: 30780277 gagatgtgtggaattttaatccagattttctttatcctgagataaaagcatggattcaag 30780336 Query: 619 ataaatataagagtcagtttgaagcaatatgggaacaaatgcaccaagaagt 670 |||||| | | || || |||| ||||||||||||||||||||| ||||||| Sbjct: 30780337 ataaatttcatagccattttggagcaatatgggaacaaatgcataaagaagt 30780388
>dbj|AP004880.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0487D09 Length = 161531 Score = 500 bits (252), Expect = e-138 Identities = 507/592 (85%) Strand = Plus / Plus Query: 79 atgatacaatatatctccaccgatcatcttctgttgcccaaactccaccagagtttgtag 138 |||||||||||||||| |||||||||||||||||||| | || | ||||||| ||||||| Sbjct: 119944 atgatacaatatatctacaccgatcatcttctgttgcacgaattgcaccagaatttgtag 120003 Query: 139 tttactcggaactactaaatacaaagagaccgtacatccatggtgtgaccagtgtaaagc 198 |||||||||||||||| ||||||||||| | || || |||||||| ||||||||||||| Sbjct: 120004 tttactcggaactacttcatacaaagagatcatatatgcatggtgtaaccagtgtaaagc 120063 Query: 199 ctggatggcttttcaaatatgctagttccctctgcaccttctcagcgccactggaagatc 258 | |||||| |||| |||||||||||||| || || || ||||| || ||| ||||||||| Sbjct: 120064 caggatggattttgaaatatgctagttctctttgtacattctctgcaccattggaagatc 120123 Query: 259 caaaaccctattacgaacctcagaatgaccaggtctactgttatgttagtcccatctttt 318 ||||||| |||||||||||||| || ||||| ||||||||||||||||| |||||||||| Sbjct: 120124 caaaaccttattacgaacctcaaaaggaccaagtctactgttatgttagccccatctttt 120183 Query: 319 ctagacataattggcagcttccgctgcacagtttacccatcgaagaccccaccagacggt 378 || | ||||||||||||||||| |||| |||||||| || | || ||||| |||| Sbjct: 120184 ctcggcataattggcagcttccattgcatagtttacctatacaggatggcaccaatcggt 120243 Query: 379 tgcaggtatttgcatgggctttgctgaaaggggatgtcttgccatgtctaagggtggttc 438 |||||||||||||||| |||||||| ||||| ||||||||||||||||| | ||| ||| Sbjct: 120244 tgcaggtatttgcatgtgctttgcttaaaggagatgtcttgccatgtcttaaggttattc 120303 Query: 439 aaaagttcctggctctgtcaccgtctgctgtccttgggcctgccagccaaagaagagttg 498 | ||||||||||| |||||||| |||| | |||| ||||||| |||||||||||||||| Sbjct: 120304 agaagttcctggcactgtcaccatctgttctcctagggcctgttagccaaagaagagttg 120363 Query: 499 gagatcttcttagcaggatgaagattggtggaaaattaaaagatagccggagagcattaa 558 | ||||||||| |||||||||||||||| ||| |||| |||||||||| |||||||| Sbjct: 120364 gtgatcttcttgacaggatgaagattggttcaaagttaatagatagccgggcagcattaa 120423 Query: 559 gagatgcatggagtagtgatccagattttctttatcctgagattcaggcatggatacagg 618 |||||| |||| | | ||||||||||||||||||||||||| | |||||||| || | Sbjct: 120424 gagatgtgtggaattttaatccagattttctttatcctgagataaaagcatggattcaag 120483 Query: 619 ataaatataagagtcagtttgaagcaatatgggaacaaatgcaccaagaagt 670 |||||| | | || || |||| ||||||||||||||||||||| ||||||| Sbjct: 120484 ataaatttcatagccattttggagcaatatgggaacaaatgcataaagaagt 120535
>dbj|AK121498.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033009M20, full insert sequence Length = 4559 Score = 500 bits (252), Expect = e-138 Identities = 507/592 (85%) Strand = Plus / Plus Query: 79 atgatacaatatatctccaccgatcatcttctgttgcccaaactccaccagagtttgtag 138 |||||||||||||||| |||||||||||||||||||| | || | ||||||| ||||||| Sbjct: 3374 atgatacaatatatctacaccgatcatcttctgttgcacgaattgcaccagaatttgtag 3433 Query: 139 tttactcggaactactaaatacaaagagaccgtacatccatggtgtgaccagtgtaaagc 198 |||||||||||||||| ||||||||||| | || || |||||||| ||||||||||||| Sbjct: 3434 tttactcggaactacttcatacaaagagatcatatatgcatggtgtaaccagtgtaaagc 3493 Query: 199 ctggatggcttttcaaatatgctagttccctctgcaccttctcagcgccactggaagatc 258 | |||||| |||| |||||||||||||| || || || ||||| || ||| ||||||||| Sbjct: 3494 caggatggattttgaaatatgctagttctctttgtacattctctgcaccattggaagatc 3553 Query: 259 caaaaccctattacgaacctcagaatgaccaggtctactgttatgttagtcccatctttt 318 ||||||| |||||||||||||| || ||||| ||||||||||||||||| |||||||||| Sbjct: 3554 caaaaccttattacgaacctcaaaaggaccaagtctactgttatgttagccccatctttt 3613 Query: 319 ctagacataattggcagcttccgctgcacagtttacccatcgaagaccccaccagacggt 378 || | ||||||||||||||||| |||| |||||||| || | || ||||| |||| Sbjct: 3614 ctcggcataattggcagcttccattgcatagtttacctatacaggatggcaccaatcggt 3673 Query: 379 tgcaggtatttgcatgggctttgctgaaaggggatgtcttgccatgtctaagggtggttc 438 |||||||||||||||| |||||||| ||||| ||||||||||||||||| | ||| ||| Sbjct: 3674 tgcaggtatttgcatgtgctttgcttaaaggagatgtcttgccatgtcttaaggttattc 3733 Query: 439 aaaagttcctggctctgtcaccgtctgctgtccttgggcctgccagccaaagaagagttg 498 | ||||||||||| |||||||| |||| | |||| ||||||| |||||||||||||||| Sbjct: 3734 agaagttcctggcactgtcaccatctgttctcctagggcctgttagccaaagaagagttg 3793 Query: 499 gagatcttcttagcaggatgaagattggtggaaaattaaaagatagccggagagcattaa 558 | ||||||||| |||||||||||||||| ||| |||| |||||||||| |||||||| Sbjct: 3794 gtgatcttcttgacaggatgaagattggttcaaagttaatagatagccgggcagcattaa 3853 Query: 559 gagatgcatggagtagtgatccagattttctttatcctgagattcaggcatggatacagg 618 |||||| |||| | | ||||||||||||||||||||||||| | |||||||| || | Sbjct: 3854 gagatgtgtggaattttaatccagattttctttatcctgagataaaagcatggattcaag 3913 Query: 619 ataaatataagagtcagtttgaagcaatatgggaacaaatgcaccaagaagt 670 |||||| | | || || |||| ||||||||||||||||||||| ||||||| Sbjct: 3914 ataaatttcatagccattttggagcaatatgggaacaaatgcataaagaagt 3965
>gb|AY112432.1| Zea mays CL3692_1 mRNA sequence Length = 617 Score = 103 bits (52), Expect = 8e-19 Identities = 163/200 (81%) Strand = Plus / Minus Query: 324 cataattggcagcttccgctgcacagtttacccatcgaagaccccaccagacggttgcag 383 ||||| ||||||||||| ||||||||||||| ||| ||||| | || ||| ||||| Sbjct: 617 cataactggcagcttccattgcacagtttacctatcaaagacggtgcgagccggctgcag 558 Query: 384 gtatttgcatgggctttgctgaaaggggatgtcttgccatgtctaagggtggttcaaaag 443 || |||||||| || ||||| |||||||| ||| ||||||||||| ||| | | | Sbjct: 557 gtgtttgcatgcgcgttgcttaaaggggacgtcctgccatgtctacgggacgccaaggat 498 Query: 444 ttcctggctctgtcaccgtctgctgtccttgggcctgccagccaaagaagagttggagat 503 ||||| || ||||||| |||||||| || ||||||||||| ||| | ||||| |||||| Sbjct: 497 ttcctcgcgttgtcaccatctgctgtgctcgggcctgccaggcaacggagagtgggagat 438 Query: 504 cttcttagcaggatgaagat 523 |||||||||||||||||||| Sbjct: 437 cttcttagcaggatgaagat 418
>gb|AC026596.9| Homo sapiens chromosome 8, clone RP11-380O15, complete sequence Length = 165158 Score = 50.1 bits (25), Expect = 0.010 Identities = 25/25 (100%) Strand = Plus / Plus Query: 621 aaatataagagtcagtttgaagcaa 645 ||||||||||||||||||||||||| Sbjct: 50350 aaatataagagtcagtttgaagcaa 50374
>gb|AC092817.2| Homo sapiens chromosome 8, clone RP11-240B13, complete sequence Length = 168719 Score = 50.1 bits (25), Expect = 0.010 Identities = 25/25 (100%) Strand = Plus / Minus Query: 621 aaatataagagtcagtttgaagcaa 645 ||||||||||||||||||||||||| Sbjct: 95947 aaatataagagtcagtttgaagcaa 95923
>gb|AC006576.15| Homo sapiens Chromosome 12p13.3 BAC Clone 762c12, complete sequence Length = 116840 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 513 aggatgaagattggtggaaaat 534 |||||||||||||||||||||| Sbjct: 28794 aggatgaagattggtggaaaat 28773
>gb|AC005904.19| Homo sapiens 12 PAC RP4-751H1 (Roswell Park Cancer Institute Human PAC Library) complete sequence Length = 65139 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 513 aggatgaagattggtggaaaat 534 |||||||||||||||||||||| Sbjct: 46544 aggatgaagattggtggaaaat 46523
>gb|M25857.1|HUMVWFA30 Human von Willebrand factor gene, exon 38 Length = 457 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 513 aggatgaagattggtggaaaat 534 |||||||||||||||||||||| Sbjct: 87 aggatgaagattggtggaaaat 108
>gb|AC102672.13| Mus musculus chromosome 14, clone RP23-181E7, complete sequence Length = 208396 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 387 tttgcatgggctttgctgaaa 407 ||||||||||||||||||||| Sbjct: 95863 tttgcatgggctttgctgaaa 95843
>ref|XM_969780.1| PREDICTED: Tribolium castaneum similar to transcriptional co-repressor Sin3A (LOC663745), mRNA Length = 4134 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 40 gaaaggttcgagctggacgtt 60 ||||||||||||||||||||| Sbjct: 1996 gaaaggttcgagctggacgtt 2016
>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome Length = 6260361 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 578 tccagattttctttatcctga 598 ||||||||||||||||||||| Sbjct: 2386866 tccagattttctttatcctga 2386846
>emb|AL671917.8| Mouse DNA sequence from clone RP23-217I18 on chromosome 3, complete sequence Length = 172826 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 405 aaaggggatgtcttgccatgt 425 ||||||||||||||||||||| Sbjct: 114674 aaaggggatgtcttgccatgt 114694
>gb|AC132345.4| Mus musculus BAC clone RP24-177P9 from chromosome 9, complete sequence Length = 183638 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 390 gcatgggctttgctgaaagg 409 |||||||||||||||||||| Sbjct: 132728 gcatgggctttgctgaaagg 132709
>gb|AC132418.3| Mus musculus BAC clone RP23-251N2 from chromosome 18, complete sequence Length = 206588 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 518 gaagattggtggaaaattaaaaga 541 |||||||||||||||| ||||||| Sbjct: 109714 gaagattggtggaaaaataaaaga 109737
>emb|CR848726.6| Zebrafish DNA sequence from clone CH211-244M8 in linkage group 2, complete sequence Length = 155408 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 577 atccagattttctttatcct 596 |||||||||||||||||||| Sbjct: 102451 atccagattttctttatcct 102470
>gb|AC123849.3| Mus musculus BAC clone RP23-460B12 from chromosome 16, complete sequence Length = 172697 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 200 tggatggcttttcaaatatg 219 |||||||||||||||||||| Sbjct: 44713 tggatggcttttcaaatatg 44732
>ref|XM_764617.1| Giardia lamblia ATCC 50803 hypothetical protein (GLP_203_5876_29392) partial mRNA Length = 23517 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 215 atatgctagttccctctgca 234 |||||||||||||||||||| Sbjct: 14717 atatgctagttccctctgca 14736
>gb|AC113528.8| Mus musculus chromosome 18, clone RP23-419F17, complete sequence Length = 217309 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 atctccaccgatcatcttct 110 |||||||||||||||||||| Sbjct: 44077 atctccaccgatcatcttct 44058
>emb|AL109924.20|HSDJ495K2 Human DNA sequence from clone RP3-495K2 on chromosome 6q26-27 Contains three novel genes and two CpG islands, complete sequence Length = 130296 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 408 ggggatgtcttgccatgtctaagg 431 |||||||||| ||||||||||||| Sbjct: 46456 ggggatgtctggccatgtctaagg 46479
>gb|AC004668.1| Homo sapiens BAC clone CTA-276O3 from 7, complete sequence Length = 112661 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 221 tagttccctctgcaccttct 240 |||||||||||||||||||| Sbjct: 57892 tagttccctctgcaccttct 57911
>gb|AC008323.3|AC008323 Drosophila melanogaster, chromosome 2L, region 24D-24D, BAC clone BACR03G07, complete sequence Length = 170064 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 516 atgaagattggtggaaaattaaaa 539 ||||||||||||| |||||||||| Sbjct: 82887 atgaagattggtgaaaaattaaaa 82864
>gb|AE010301.1| Leptospira interrogans serovar Lai str. 56601 chromosome II, complete sequence Length = 358943 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 tcggaactactaaatacaaa 163 |||||||||||||||||||| Sbjct: 3813 tcggaactactaaatacaaa 3794
>gb|AE003579.3| Drosophila melanogaster chromosome 2L, section 12 of 83 of the complete sequence Length = 304674 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 516 atgaagattggtggaaaattaaaa 539 ||||||||||||| |||||||||| Sbjct: 106104 atgaagattggtgaaaaattaaaa 106081
>gb|AC153821.6| Mus musculus 10 BAC RP23-193A14 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 204618 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 437 tcaaaagttcctggctctgt 456 |||||||||||||||||||| Sbjct: 110330 tcaaaagttcctggctctgt 110349
>gb|AE016824.1| Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130, chromosome II, complete sequence Length = 350181 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 tcggaactactaaatacaaa 163 |||||||||||||||||||| Sbjct: 3811 tcggaactactaaatacaaa 3792
>gb|AF075068.1|HUMYQ04C07 Homo sapiens full length insert cDNA YQ04C07 Length = 670 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 408 ggggatgtcttgccatgtctaagg 431 |||||||||| ||||||||||||| Sbjct: 564 ggggatgtctggccatgtctaagg 587 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,900,458 Number of Sequences: 3902068 Number of extensions: 6900458 Number of successful extensions: 138255 Number of sequences better than 10.0: 28 Number of HSP's better than 10.0 without gapping: 28 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 138131 Number of HSP's gapped (non-prelim): 119 length of query: 696 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 673 effective length of database: 17,143,297,704 effective search space: 11537439354792 effective search space used: 11537439354792 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)