ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags13d07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 230 4e-57
2gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 230 4e-57
3emb|AL831803.4|CNS08CAG Oryza sativa chromosome 12, . BAC OSJNBb... 230 4e-57
4dbj|AP006737.1| Lotus japonicus genomic DNA, chromosome 1, clone... 44 0.50
5dbj|AP006736.1| Lotus japonicus genomic DNA, chromosome 1, clone... 44 0.50
6gb|AC102616.7| Mus musculus chromosome 18, clone RP23-425L21, co... 42 2.0
7gb|AC093351.8| Mus musculus chromosome 7, clone RP23-16L19, comp... 42 2.0
8gb|AC157901.4| Mus musculus chromosome 18, clone RP23-189P21, co... 42 2.0
9gb|AC002339.3| Arabidopsis thaliana chromosome 2 clone T11A7 map... 42 2.0
10gb|AF296833.1|F7C8 Arabidopsis thaliana BAC F7C8 42 2.0
11emb|AL731699.11| Mouse DNA sequence from clone RP23-336F11 on ch... 42 2.0
12gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete g... 40 7.8
13gb|AE017347.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 7.8
14gb|AC117585.8| Mus musculus chromosome 5, clone RP23-155F13, com... 40 7.8
15ref|XM_823526.1| Trypanosoma brucei TREU927 malic enzyme (Tb11.0... 40 7.8
16ref|XM_823527.1| Trypanosoma brucei TREU927 malic enzyme (Tb11.0... 40 7.8
17gb|AC122925.3| Mus musculus BAC clone RP23-9O19 from 1, complete... 40 7.8
18emb|AL353789.18| Human DNA sequence from clone RP11-570F6 on chr... 40 7.8
19emb|AL034557.8|PFMAL4P1 Plasmodium falciparum MAL4P1 40 7.8
20gb|AC174350.4| Medicago truncatula clone mth2-3g18, complete seq... 40 7.8
21gb|AE003849.1| Xylella fastidiosa 9a5c, complete genome 40 7.8
22ref|XM_572085.1| Cryptococcus neoformans var. neoformans JEC21 c... 40 7.8
23gb|AC153650.4| Mus musculus BAC clone RP24-93I18 from chromosome... 40 7.8
24gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 7.8
25dbj|AK033243.1| Mus musculus 15 days embryo male testis cDNA, RI... 40 7.8
26dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.8
27dbj|AP002872.2| Oryza sativa (japonica cultivar-group) genomic D... 40 7.8
28gb|AF037045.1|AF037045 Mus musculus strain M.SPRET/EI thiopurine... 40 7.8
29gb|AE009442.1| Xylella fastidiosa Temecula1, complete genome 40 7.8
30gb|AC129777.4| Mus musculus BAC clone RP23-281H23 from 8, comple... 40 7.8
31gb|AC173341.1| Mus musculus BAC clone RP24-332P6 from chromosome... 40 7.8
32dbj|AP005404.2| Homo sapiens genomic DNA, chromosome 18 clone:RP... 40 7.8 
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  230 bits (116), Expect = 4e-57
 Identities = 209/240 (87%)
 Strand = Plus / Minus

                                                                            
Query: 5        tgccttgcatatatattaggagccatttccaatctattatcaaagataggtatatcaagc 64
                ||||| || |||||||||||||| ||||||||||| |||||||||||||| || ||||||
Sbjct: 26808376 tgcctggcctatatattaggagctatttccaatctgttatcaaagataggcatgtcaagc 26808317

                                                                            
Query: 65       acagttggattaattggttctcgatattcacttggaaacaatattggactgggcacacca 124
                |||||||||  |||||||||||  |||||||||||||| || || ||| | |||||||| 
Sbjct: 26808316 acagttggaacaattggttctccttattcacttggaaataacatcggattaggcacaccg 26808257

                                                                            
Query: 125      ttgtccattcagcagcagttgcttgttcttttgaagcgatcccttaagagagctgatatg 184
                 ||||||||||||| ||| ||||||||||||| ||| |||| |||||| |||||||||  
Sbjct: 26808256 ctgtccattcagcaacagctgcttgttcttttaaagagatcacttaagcgagctgatacc 26808197

                                                                            
Query: 185      ctgaaacttacaagcttactatcctttgatcacatctctcttgcaaaatttgatttgaag 244
                 |||||||||||||||| || |||||||||||| | |||||||||||||||||| |||||
Sbjct: 26808196 ttgaaacttacaagcttgctgtcctttgatcacctttctcttgcaaaatttgatctgaag 26808137



 Score =  192 bits (97), Expect = 9e-46
 Identities = 214/253 (84%)
 Strand = Plus / Minus

                                                                            
Query: 321      agaatttaagattaagttcccatgtgctgtccgacttcggcacagatagcttatcaattt 380
                ||||||| ||||||||||| | |||| || | ||||| ||||||||| ||||||||   |
Sbjct: 26807568 agaatttgagattaagttcacgtgtgttgactgactttggcacagatggcttatcagcat 26807509

                                                                            
Query: 381      cgaatgataatggtagtttcagtacctcatggcttaggaatctgtctgatgcttccagat 440
                | ||||||||||||||||| ||||| |||||||||||||||||||||| |||||| |  |
Sbjct: 26807508 caaatgataatggtagttttagtacttcatggcttaggaatctgtctgctgcttctaatt 26807449

                                                                            
Query: 441      cttggtctaatagctcagcaaagactagaaaacttattgcaaatgactttgacaatttcc 500
                |||||| ||  |||||   |||  || |||||||  || | |||||||| ||||||||||
Sbjct: 26807448 cttggtgtagcagctcgaaaaaatctggaaaactacttacgaatgacttcgacaatttcc 26807389

                                                                            
Query: 501      actttcatgcacaaccaagtccaatacctacatcagtattgcaattagccggctcagcac 560
                | |||||||||||||||||||| |||||| ||||||||||||||||||| ||||||||  
Sbjct: 26807388 attttcatgcacaaccaagtcctatacctgcatcagtattgcaattagctggctcagctt 26807329

                             
Query: 561      atttgatgagggc 573
                ||||| |||||||
Sbjct: 26807328 atttgctgagggc 26807316



 Score =  119 bits (60), Expect = 1e-23
 Identities = 75/80 (93%)
 Strand = Plus / Minus

                                                                            
Query: 243      agcatgtccaaaggccgttggtgtcctttggccctaatggttctacaaagcttagaacct 302
                ||||||||||||||||  ||||||||||||||||||||| ||| |||||||||||||| |
Sbjct: 26807750 agcatgtccaaaggcctctggtgtcctttggccctaatgcttccacaaagcttagaacat 26807691

                                    
Query: 303      gtcctgcagatgtctgcaag 322
                ||||||||||||||||||||
Sbjct: 26807690 gtcctgcagatgtctgcaag 26807671
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  230 bits (116), Expect = 4e-57
 Identities = 209/240 (87%)
 Strand = Plus / Minus

                                                                            
Query: 5        tgccttgcatatatattaggagccatttccaatctattatcaaagataggtatatcaagc 64
                ||||| || |||||||||||||| ||||||||||| |||||||||||||| || ||||||
Sbjct: 26736546 tgcctggcctatatattaggagctatttccaatctgttatcaaagataggcatgtcaagc 26736487

                                                                            
Query: 65       acagttggattaattggttctcgatattcacttggaaacaatattggactgggcacacca 124
                |||||||||  |||||||||||  |||||||||||||| || || ||| | |||||||| 
Sbjct: 26736486 acagttggaacaattggttctccttattcacttggaaataacatcggattaggcacaccg 26736427

                                                                            
Query: 125      ttgtccattcagcagcagttgcttgttcttttgaagcgatcccttaagagagctgatatg 184
                 ||||||||||||| ||| ||||||||||||| ||| |||| |||||| |||||||||  
Sbjct: 26736426 ctgtccattcagcaacagctgcttgttcttttaaagagatcacttaagcgagctgatacc 26736367

                                                                            
Query: 185      ctgaaacttacaagcttactatcctttgatcacatctctcttgcaaaatttgatttgaag 244
                 |||||||||||||||| || |||||||||||| | |||||||||||||||||| |||||
Sbjct: 26736366 ttgaaacttacaagcttgctgtcctttgatcacctttctcttgcaaaatttgatctgaag 26736307



 Score =  192 bits (97), Expect = 9e-46
 Identities = 214/253 (84%)
 Strand = Plus / Minus

                                                                            
Query: 321      agaatttaagattaagttcccatgtgctgtccgacttcggcacagatagcttatcaattt 380
                ||||||| ||||||||||| | |||| || | ||||| ||||||||| ||||||||   |
Sbjct: 26735738 agaatttgagattaagttcacgtgtgttgactgactttggcacagatggcttatcagcat 26735679

                                                                            
Query: 381      cgaatgataatggtagtttcagtacctcatggcttaggaatctgtctgatgcttccagat 440
                | ||||||||||||||||| ||||| |||||||||||||||||||||| |||||| |  |
Sbjct: 26735678 caaatgataatggtagttttagtacttcatggcttaggaatctgtctgctgcttctaatt 26735619

                                                                            
Query: 441      cttggtctaatagctcagcaaagactagaaaacttattgcaaatgactttgacaatttcc 500
                |||||| ||  |||||   |||  || |||||||  || | |||||||| ||||||||||
Sbjct: 26735618 cttggtgtagcagctcgaaaaaatctggaaaactacttacgaatgacttcgacaatttcc 26735559

                                                                            
Query: 501      actttcatgcacaaccaagtccaatacctacatcagtattgcaattagccggctcagcac 560
                | |||||||||||||||||||| |||||| ||||||||||||||||||| ||||||||  
Sbjct: 26735558 attttcatgcacaaccaagtcctatacctgcatcagtattgcaattagctggctcagctt 26735499

                             
Query: 561      atttgatgagggc 573
                ||||| |||||||
Sbjct: 26735498 atttgctgagggc 26735486



 Score =  119 bits (60), Expect = 1e-23
 Identities = 75/80 (93%)
 Strand = Plus / Minus

                                                                            
Query: 243      agcatgtccaaaggccgttggtgtcctttggccctaatggttctacaaagcttagaacct 302
                ||||||||||||||||  ||||||||||||||||||||| ||| |||||||||||||| |
Sbjct: 26735920 agcatgtccaaaggcctctggtgtcctttggccctaatgcttccacaaagcttagaacat 26735861

                                    
Query: 303      gtcctgcagatgtctgcaag 322
                ||||||||||||||||||||
Sbjct: 26735860 gtcctgcagatgtctgcaag 26735841
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>emb|AL831803.4|CNS08CAG Oryza sativa chromosome 12, . BAC OSJNBb0016P08 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 142370

 Score =  230 bits (116), Expect = 4e-57
 Identities = 209/240 (87%)
 Strand = Plus / Minus

                                                                         
Query: 5     tgccttgcatatatattaggagccatttccaatctattatcaaagataggtatatcaagc 64
             ||||| || |||||||||||||| ||||||||||| |||||||||||||| || ||||||
Sbjct: 12343 tgcctggcctatatattaggagctatttccaatctgttatcaaagataggcatgtcaagc 12284

                                                                         
Query: 65    acagttggattaattggttctcgatattcacttggaaacaatattggactgggcacacca 124
             |||||||||  |||||||||||  |||||||||||||| || || ||| | |||||||| 
Sbjct: 12283 acagttggaacaattggttctccttattcacttggaaataacatcggattaggcacaccg 12224

                                                                         
Query: 125   ttgtccattcagcagcagttgcttgttcttttgaagcgatcccttaagagagctgatatg 184
              ||||||||||||| ||| ||||||||||||| ||| |||| |||||| |||||||||  
Sbjct: 12223 ctgtccattcagcaacagctgcttgttcttttaaagagatcacttaagcgagctgatacc 12164

                                                                         
Query: 185   ctgaaacttacaagcttactatcctttgatcacatctctcttgcaaaatttgatttgaag 244
              |||||||||||||||| || |||||||||||| | |||||||||||||||||| |||||
Sbjct: 12163 ttgaaacttacaagcttgctgtcctttgatcacctttctcttgcaaaatttgatctgaag 12104



 Score =  192 bits (97), Expect = 9e-46
 Identities = 214/253 (84%)
 Strand = Plus / Minus

                                                                         
Query: 321   agaatttaagattaagttcccatgtgctgtccgacttcggcacagatagcttatcaattt 380
             ||||||| ||||||||||| | |||| || | ||||| ||||||||| ||||||||   |
Sbjct: 11535 agaatttgagattaagttcacgtgtgttgactgactttggcacagatggcttatcagcat 11476

                                                                         
Query: 381   cgaatgataatggtagtttcagtacctcatggcttaggaatctgtctgatgcttccagat 440
             | ||||||||||||||||| ||||| |||||||||||||||||||||| |||||| |  |
Sbjct: 11475 caaatgataatggtagttttagtacttcatggcttaggaatctgtctgctgcttctaatt 11416

                                                                         
Query: 441   cttggtctaatagctcagcaaagactagaaaacttattgcaaatgactttgacaatttcc 500
             |||||| ||  |||||   |||  || |||||||  || | |||||||| ||||||||||
Sbjct: 11415 cttggtgtagcagctcgaaaaaatctggaaaactacttacgaatgacttcgacaatttcc 11356

                                                                         
Query: 501   actttcatgcacaaccaagtccaatacctacatcagtattgcaattagccggctcagcac 560
             | |||||||||||||||||||| |||||| ||||||||||||||||||| ||||||||  
Sbjct: 11355 attttcatgcacaaccaagtcctatacctgcatcagtattgcaattagctggctcagctt 11296

                          
Query: 561   atttgatgagggc 573
             ||||| |||||||
Sbjct: 11295 atttgctgagggc 11283



 Score =  119 bits (60), Expect = 1e-23
 Identities = 75/80 (93%)
 Strand = Plus / Minus

                                                                         
Query: 243   agcatgtccaaaggccgttggtgtcctttggccctaatggttctacaaagcttagaacct 302
             ||||||||||||||||  ||||||||||||||||||||| ||| |||||||||||||| |
Sbjct: 11717 agcatgtccaaaggcctctggtgtcctttggccctaatgcttccacaaagcttagaacat 11658

                                 
Query: 303   gtcctgcagatgtctgcaag 322
             ||||||||||||||||||||
Sbjct: 11657 gtcctgcagatgtctgcaag 11638
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>dbj|AP006737.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT20F11, TM1687,
            complete sequence
          Length = 91649

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 184  gctgaaacttacaagcttacta 205
            ||||||||||||||||||||||
Sbjct: 5602 gctgaaacttacaagcttacta 5623
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>dbj|AP006736.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT45I15, TM1494,
             complete sequence
          Length = 114162

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 184   gctgaaacttacaagcttacta 205
             ||||||||||||||||||||||
Sbjct: 70604 gctgaaacttacaagcttacta 70625
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>gb|AC102616.7| Mus musculus chromosome 18, clone RP23-425L21, complete sequence
          Length = 192276

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 201   tactatcctttgatcacatct 221
             |||||||||||||||||||||
Sbjct: 42491 tactatcctttgatcacatct 42511
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>gb|AC093351.8| Mus musculus chromosome 7, clone RP23-16L19, complete sequence
          Length = 239688

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 299   acctgtcctgcagatgtctgc 319
             |||||||||||||||||||||
Sbjct: 36037 acctgtcctgcagatgtctgc 36017
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>gb|AC157901.4| Mus musculus chromosome 18, clone RP23-189P21, complete sequence
          Length = 191242

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 201   tactatcctttgatcacatct 221
             |||||||||||||||||||||
Sbjct: 65211 tactatcctttgatcacatct 65191
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>gb|AC002339.3| Arabidopsis thaliana chromosome 2 clone T11A7 map CIC11C08, complete
             sequence
          Length = 91071

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 467   agaaaacttattgcaaatgac 487
             |||||||||||||||||||||
Sbjct: 78353 agaaaacttattgcaaatgac 78333
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>gb|AF296833.1|F7C8 Arabidopsis thaliana BAC F7C8
          Length = 70169

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 186   tgaaacttacaagcttactat 206
             |||||||||||||||||||||
Sbjct: 35177 tgaaacttacaagcttactat 35157
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>emb|AL731699.11| Mouse DNA sequence from clone RP23-336F11 on chromosome 2, complete
             sequence
          Length = 212836

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 517   aagtccaatacctacatcagtattg 541
             ||||||||||||||||||| |||||
Sbjct: 12846 aagtccaatacctacatcattattg 12822
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>gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete genome
          Length = 1709204

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 285   ctacaaagcttagaacctgt 304
             ||||||||||||||||||||
Sbjct: 64217 ctacaaagcttagaacctgt 64236
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>gb|AE017347.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 7, complete
               sequence
          Length = 1347793

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 207     cctttgatcacatctctctt 226
               ||||||||||||||||||||
Sbjct: 1071378 cctttgatcacatctctctt 1071359
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>gb|AC117585.8| Mus musculus chromosome 5, clone RP23-155F13, complete sequence
          Length = 215745

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 296    agaacctgtcctgcagatgt 315
              ||||||||||||||||||||
Sbjct: 156155 agaacctgtcctgcagatgt 156174
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>ref|XM_823526.1| Trypanosoma brucei TREU927 malic enzyme (Tb11.02.3120) partial mRNA
          Length = 1695

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 509  gcacaaccaagtccaatacc 528
            ||||||||||||||||||||
Sbjct: 1409 gcacaaccaagtccaatacc 1390
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>ref|XM_823527.1| Trypanosoma brucei TREU927 malic enzyme (Tb11.02.3130) partial mRNA
          Length = 1716

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 509  gcacaaccaagtccaatacc 528
            ||||||||||||||||||||
Sbjct: 1418 gcacaaccaagtccaatacc 1399
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>gb|AC122925.3| Mus musculus BAC clone RP23-9O19 from 1, complete sequence
          Length = 256751

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 221    tctcttgcaaaatttgattt 240
              ||||||||||||||||||||
Sbjct: 200054 tctcttgcaaaatttgattt 200035
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>emb|AL353789.18| Human DNA sequence from clone RP11-570F6 on chromosome 13 Contains the
             5' end of the WASF3 gene for WAS protein family, member 3
             (WASP family Verprolin-homologous protein 3(SCAR3, Scar3,
             WAVE3, KIAA0900)), a ribosomal protein S3A (RPS3A)(FTE1)
             pseudogene and a CpG island, complete sequence
          Length = 166787

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 469   aaaacttattgcaaatgactttgacaat 496
             ||||||||||| ||||||||||| ||||
Sbjct: 89906 aaaacttattgaaaatgactttgtcaat 89879
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>emb|AL034557.8|PFMAL4P1 Plasmodium falciparum MAL4P1
          Length = 347582

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 65    acagttggattaattggttc 84
             ||||||||||||||||||||
Sbjct: 49141 acagttggattaattggttc 49122
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>gb|AC174350.4| Medicago truncatula clone mth2-3g18, complete sequence
          Length = 77292

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 218   atctctcttgcaaaatttga 237
             ||||||||||||||||||||
Sbjct: 55231 atctctcttgcaaaatttga 55250
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>gb|AE003849.1| Xylella fastidiosa 9a5c, complete genome
          Length = 2679306

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 371    ttatcaatttcgaatgataa 390
              ||||||||||||||||||||
Sbjct: 466250 ttatcaatttcgaatgataa 466231
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>ref|XM_572085.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 7
          Length = 2704

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 207 cctttgatcacatctctctt 226
           ||||||||||||||||||||
Sbjct: 869 cctttgatcacatctctctt 850
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>gb|AC153650.4| Mus musculus BAC clone RP24-93I18 from chromosome 1, complete sequence
          Length = 199753

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 221    tctcttgcaaaatttgattt 240
              ||||||||||||||||||||
Sbjct: 101625 tctcttgcaaaatttgattt 101606
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 342     atgtgctgtccgacttcggc 361
               ||||||||||||||||||||
Sbjct: 2619994 atgtgctgtccgacttcggc 2620013
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>dbj|AK033243.1| Mus musculus 15 days embryo male testis cDNA, RIKEN full-length
           enriched library, clone:8030474H12
           product:unclassifiable, full insert sequence
          Length = 2252

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 453 gctcagcaaagactagaaaa 472
           ||||||||||||||||||||
Sbjct: 489 gctcagcaaagactagaaaa 470
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 465     ctagaaaacttattgcaaat 484
               ||||||||||||||||||||
Sbjct: 2518762 ctagaaaacttattgcaaat 2518743
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>dbj|AP002872.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0416D03
          Length = 157112

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 465   ctagaaaacttattgcaaat 484
             ||||||||||||||||||||
Sbjct: 73183 ctagaaaacttattgcaaat 73164
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>gb|AF037045.1|AF037045 Mus musculus strain M.SPRET/EI thiopurine S-methyltransferase
           (Tpmt) mRNA, complete cds
          Length = 829

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 395 agtttcagtacctcatggct 414
           ||||||||||||||||||||
Sbjct: 545 agtttcagtacctcatggct 564
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>gb|AE009442.1| Xylella fastidiosa Temecula1, complete genome
          Length = 2519802

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 371     ttatcaatttcgaatgataa 390
               ||||||||||||||||||||
Sbjct: 1881826 ttatcaatttcgaatgataa 1881845
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>gb|AC129777.4| Mus musculus BAC clone RP23-281H23 from 8, complete sequence
          Length = 228174

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 495   atttccactttcatgcacaaccaa 518
             ||||| ||||||||||||||||||
Sbjct: 99008 atttcaactttcatgcacaaccaa 99031
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>gb|AC173341.1| Mus musculus BAC clone RP24-332P6 from chromosome 9, complete
            sequence
          Length = 149387

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 453  gctcagcaaagactagaaaa 472
            ||||||||||||||||||||
Sbjct: 5495 gctcagcaaagactagaaaa 5514
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>dbj|AP005404.2| Homo sapiens genomic DNA, chromosome 18 clone:RP11-94H14, complete
              sequence
          Length = 142000

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 90     attcacttggaaacaatatt 109
              ||||||||||||||||||||
Sbjct: 121209 attcacttggaaacaatatt 121190


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,230,113
Number of Sequences: 3902068
Number of extensions: 5230113
Number of successful extensions: 98453
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 98259
Number of HSP's gapped (non-prelim): 194
length of query: 573
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 550
effective length of database: 17,143,297,704
effective search space: 9428813737200
effective search space used: 9428813737200
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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