| Clone Name | bags13c20 |
|---|---|
| Clone Library Name | barley_pub |
>JI23_HORVU (P32024) 23 kDa jasmonate-induced protein| Length = 210 Score = 323 bits (829), Expect = 2e-88 Identities = 149/201 (74%), Positives = 170/201 (84%), Gaps = 2/201 (0%) Frame = +3 Query: 3 FGIPISMQTVIATGEYKEPVTQKDVADYTMKMINAGGKDIDAQQFVDNLKIKYGNGISVK 182 FG PIS QTVIATGEYKEP+TQKDVADY MKMINAGGKD++AQ+FVDNLK +YGNGI+VK Sbjct: 6 FGTPISAQTVIATGEYKEPITQKDVADYAMKMINAGGKDVNAQKFVDNLKERYGNGIAVK 65 Query: 183 CLIYNATGTNLSFVTYKNWIGSIFDTPYPSDIQNGQWGAFLHVKPRAAAKGSTAAVVYRS 362 CL+YNATG L+F Y +W G I+DTPYPSDIQNGQWGAFLHV P AA GS AVVYRS Sbjct: 66 CLLYNATGATLNFAKYNDWHGHIYDTPYPSDIQNGQWGAFLHVHPSGAAAGSAGAVVYRS 125 Query: 363 RIPXXXXXCDWLFTWSVPFIGNNGVYTEIREQGHFPK--HWDYIYNVRLANSNLHSTDSN 536 +IP CDWLF+W+VP+IG NGVYTEIRE+GH+P WDYIYNV+L NS++ S DSN Sbjct: 126 KIPSSSSSCDWLFSWTVPYIGGNGVYTEIREEGHYPSVGSWDYIYNVKLKNSSVTSIDSN 185 Query: 537 YGYVSRANIGEGTTMNARAVF 599 YGYVS+A+IGEGTTMNAR VF Sbjct: 186 YGYVSKADIGEGTTMNARGVF 206
>JIPH_ATRCA (P42764) Jasmonate-induced protein homolog| Length = 185 Score = 46.6 bits (109), Expect = 5e-05 Identities = 47/163 (28%), Positives = 63/163 (38%), Gaps = 15/163 (9%) Frame = +3 Query: 90 MKMINAGGKDIDAQQFVDNLKIKYGN-GISVKCL------IYNATGTNLSFVTYKNWIGS 248 M A G ++ VD + K N G++V+ + N T +++F NW GS Sbjct: 1 MASTQAMGMTEQQKKSVDEMVEKATNMGVNVQAQNSAVVSMINQTNVSMTFNENHNWSGS 60 Query: 249 IFDTPYPSDIQNGQWGAFLHVKPRAAAKGSTAAVVYRSRIPXXXXXCDWLFTWSVPF--- 419 + T YP I Q F+H A GS AVVY C WL W P Sbjct: 61 VVGTGYPKSIPTKQSRQFIH--QGDAKDGSQGAVVYYGS-NANGEPCGWLLAWCAPTNVT 117 Query: 420 -IGNNGVYTEIREQGHFPK-HWDYI---YNVRLANSNLHSTDS 533 N VY + Q F WD I +V A +N D+ Sbjct: 118 PTKPNRVYVDCGAQSKFDTISWDTIKAKLDVGPATTNFTDVDT 160
>LEPA_MYCS5 (Q4A5S3) GTP-binding protein lepA| Length = 605 Score = 32.3 bits (72), Expect = 1.1 Identities = 27/101 (26%), Positives = 43/101 (42%), Gaps = 7/101 (6%) Frame = +3 Query: 75 VADYTMKMINAGGKDIDAQQFVDNLKIKYGNGISVKCLIYNATGTNLSFVTYKNWIGSIF 254 +AD +++ N K QF+D+++++ GIS+K N + YK++I + Sbjct: 22 LADRILELTNTVSKRELTNQFLDSMELEKERGISIK--------LNAVQLKYKDYIFQLI 73 Query: 255 DTPYPSDIQ-------NGQWGAFLHVKPRAAAKGSTAAVVY 356 DTP D GA L V + T A VY Sbjct: 74 DTPGHVDFTYEVSRSLAASEGALLIVDATQGIQAQTLANVY 114
>JHD1B_XENLA (Q640I9) JmjC domain-containing histone demethylation protein 1B (EC| 1.14.11.-) (F-box/LRR-repeat protein 10) (F-box and leucine-rich repeat protein 10) Length = 1259 Score = 31.2 bits (69), Expect = 2.4 Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 5/67 (7%) Frame = -1 Query: 323 CSWFDVEK-----CPPLSILNIRWVGCIKDTANPILVRDETQIGTGSIVDEAFYRYSITV 159 CSW V CP L LN++WV +KD L+ T G I + + R +IT Sbjct: 1082 CSWIAVSALCSSCCPLLRTLNVQWVEGLKDAQMRDLLSPPTDNRPGQIDNRSKLR-NITE 1140 Query: 158 LDLQVVD 138 L L +D Sbjct: 1141 LRLAGLD 1147
>IL4RA_HORSE (Q6WG24) Interleukin-4 receptor alpha chain precursor (IL-4R-alpha)| (CD124 antigen) Length = 809 Score = 31.2 bits (69), Expect = 2.4 Identities = 24/80 (30%), Positives = 34/80 (42%), Gaps = 4/80 (5%) Frame = +3 Query: 306 HVKPRAAAKGSTAAVVYRSRIPXXXXXCDWLFTWSVPFIGNNGVYTEIREQGHFPKHWD- 482 HVKPRA + A+ + WL TWS P+ N +++E+ + K D Sbjct: 120 HVKPRAPQNLTVHAISHT-----------WLLTWSNPYPLKNHLWSELTYLVNISKEDDP 168 Query: 483 ---YIYNVRLANSNLHSTDS 533 IYNV + L T S Sbjct: 169 TDFKIYNVTYMDPTLRVTAS 188
>YP158_YEAST (Q99299) Protein YPL158C| Length = 758 Score = 30.8 bits (68), Expect = 3.1 Identities = 22/60 (36%), Positives = 30/60 (50%) Frame = +3 Query: 417 FIGNNGVYTEIREQGHFPKHWDYIYNVRLANSNLHSTDSNYGYVSRANIGEGTTMNARAV 596 F NGV + E G+ DY +N+N +S S+ GY S ANI + TT + R V Sbjct: 49 FAAENGVSRD--EDGNSQTLSDY---TSTSNTNTNSGYSSNGYYSFANISDNTTSSPRIV 103
>CARA_ACIAD (Q6F8M7) Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)| (Carbamoyl-phosphate synthetase glutamine chain) Length = 379 Score = 30.0 bits (66), Expect = 5.3 Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 3/59 (5%) Frame = +3 Query: 396 LFTWSVPFIGNNGVYTEIREQGHFPKHWD---YIYNVRLANSNLHSTDSNYGYVSRANI 563 L T + P IGN G E E G K W I ++ L +SN S S Y+ + N+ Sbjct: 52 LVTLTYPHIGNTGCNEEDTESGRIHKVWANGLIIRDLPLLHSNFRSEQSLAEYLIQHNV 110
>DYHA_CHLRE (Q39610) Dynein alpha chain, flagellar outer arm (DHC alpha)| Length = 4499 Score = 30.0 bits (66), Expect = 5.3 Identities = 12/35 (34%), Positives = 18/35 (51%) Frame = -1 Query: 317 WFDVEKCPPLSILNIRWVGCIKDTANPILVRDETQ 213 WFD K P +I N ++V C+ TA ++ Q Sbjct: 2464 WFDRAKLTPKNINNTQYVACMNPTAGSFIINPRLQ 2498 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 96,370,416 Number of Sequences: 219361 Number of extensions: 2161988 Number of successful extensions: 5533 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 5400 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5531 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5253413348 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)