Clone Information

BLAST Search Result

Clone Name	bags13c15
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	dbj\|AK104375.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	807	0.0
2	dbj\|AK099815.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	807	0.0
3	dbj\|AK061385.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	807	0.0
4	gb\|BT017217.1\| Zea mays clone EL01N0372E04.c mRNA sequence	519	e-144
5	gb\|AY105157.1\| Zea mays PCO115092 mRNA sequence	331	2e-87
6	gb\|AY105451.1\| Zea mays PCO122767 mRNA sequence	244	3e-61
7	dbj\|AP008212.1\| Oryza sativa (japonica cultivar-group) genomic D...	178	2e-41
8	dbj\|AP003526.3\| Oryza sativa (japonica cultivar-group) genomic D...	178	2e-41
9	gb\|AC152498.11\| Medicago truncatula clone mth2-38m20, complete s...	54	6e-04
10	gb\|AC139211.13\| Mus musculus chromosome 6, clone RP23-302O24, co...	46	0.14
11	gb\|AY279311.1\| Malus x domestica ATP-dependent Clp protease prot...	46	0.14
12	gb\|AC158683.2\| Mus musculus 6 BAC RP23-328P16 (Roswell Park Canc...	46	0.14
13	gb\|AY665221.1\| Saimiri boliviensis reticulon 1 mRNA, partial cds	42	2.3
14	ref\|NM_101113.2\| Arabidopsis thaliana CLPR2; endopeptidase Clp A...	42	2.3
15	tpg\|BK001692.1\| TPA: TPA_inf: Ateles belzebuth chamek RTN1-Aw (R...	42	2.3
16	gb\|AY081641.1\| Arabidopsis thaliana similar to nClpP2 dbj\|BAA820...	42	2.3
17	gb\|AY062770.1\| Arabidopsis thaliana similar to nClpP2 (At1g12410...	42	2.3
18	gb\|AY057617.1\| Arabidopsis thaliana At1g12410/F5O11_7 mRNA, comp...	42	2.3
19	emb\|BX813571.1\|CNS0AAJF Arabidopsis thaliana Full-length cDNA Co...	42	2.3
20	emb\|BX841886.1\|CNS09Y1Z Arabidopsis thaliana Full-length cDNA Co...	42	2.3
21	emb\|BX842500.1\|CNS0ABM0 Arabidopsis thaliana Full-length cDNA Co...	42	2.3
22	gb\|AF029167.1\|AF029167 Ateles paniscus chamek neuroendocrine-spe...	42	2.3
23	dbj\|AB022327.1\| Arabidopsis thaliana mRNA for nClpP2 (nuclear en...	42	2.3
24	ref\|NM_193865.1\| Oryza sativa (japonica cultivar-group), predic...	40	8.9
25	emb\|AL356215.11\| Human DNA sequence from clone RP4-607I7 on chro...	40	8.9
26	gb\|AC091535.2\| Takifugu rubripes clone 241F4, complete sequence	40	8.9
27	emb\|AL109612.7\|HSJ1018A4 Human DNA sequence from clone RP5-1018A...	40	8.9
28	gb\|AC134473.4\| Mus musculus BAC clone RP23-190G18 from chromosom...	40	8.9
29	emb\|AJ632270.1\| Actinoplanes teichomyceticus teicoplanin gene cl...	40	8.9
30	emb\|AJ605139.1\| Actinoplanes teichomyceticus gene cluster for bi...	40	8.9
31	gb\|AC164439.4\| Mus musculus BAC clone RP23-31B24 from chromosome...	40	8.9
32	emb\|AJ252202.1\|DME252202 Drosophila melanogaster D-COQ7 gene for...	40	8.9
33	emb\|CR382291.11\| Zebrafish DNA sequence from clone CH211-245G10,...	40	8.9
34	gb\|CP000301.1\| Rhodopseudomonas palustris BisB18, complete genome	40	8.9
35	gb\|AC023722.4\| Drosophila melanogaster X BAC RP98-48O24 (Roswell...	40	8.9
36	ref\|NM_132121.2\| Drosophila melanogaster shifted CG3135-RA (shf)...	40	8.9
37	gb\|AY051622.1\| Drosophila melanogaster GH27042 full length cDNA	40	8.9
38	tpg\|BK000323.1\| TPA: TPA_exp: Oryza sativa (indica cultivar-grou...	40	8.9
39	dbj\|AP008208.1\| Oryza sativa (japonica cultivar-group) genomic D...	40	8.9
40	dbj\|AP008207.1\| Oryza sativa (japonica cultivar-group) genomic D...	40	8.9
41	gb\|AC068614.5\| Homo sapiens BAC clone RP11-512N1 from 2, complet...	40	8.9
42	dbj\|AP004769.3\| Oryza sativa (japonica cultivar-group) genomic D...	40	8.9
43	dbj\|AP003199.3\| Oryza sativa (japonica cultivar-group) genomic D...	40	8.9
44	emb\|AL132709.5\|CNS01DTB Human chromosome 14 DNA sequence BAC R-9...	40	8.9
45	gb\|AE003438.3\| Drosophila melanogaster chromosome X, section 22 ...	40	8.9
46	gb\|AC009994.10\| Homo sapiens chromosome 17, clone RP11-87N3, com...	40	8.9
47	emb\|AL672005.7\| Mouse DNA sequence from clone RP23-401A9 on chro...	40	8.9

>dbj|AK104375.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-G04, full
           insert sequence
          Length = 1133

 Score =  807 bits (407), Expect = 0.0
 Identities = 589/649 (90%), Gaps = 3/649 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   cggcgcccgccaactcctcctgcttccacccccgcgccgtcgcc---agctcgccctcct 61
           ||||||| || |||||||||||||||||||| ||||||| ||||   ||| ||||||| |
Sbjct: 45  cggcgccggcgaactcctcctgcttccacccgcgcgccgccgccgccagcgcgccctcat 104

                                                                       
Query: 62  ctctcagcgtgggcaccaaggtcttcgtcgggctgaaggcgcagacgaggctcggctcgt 121
           |||||||||||||||||||||||||||||||| ||||||| ||||| | ||| |||||||
Sbjct: 105 ctctcagcgtgggcaccaaggtcttcgtcgggttgaaggcccagaccaagctaggctcgt 164

                                                                       
Query: 122 cagagtcgtcgtgcccgaacgtcaacgcccggttctacaccgccgtcaaccggagggtct 181
           | ||||||||||||||||| |||| |||| |||||||||||||||||||||||||| |||
Sbjct: 165 cggagtcgtcgtgcccgaatgtcaccgccgggttctacaccgccgtcaaccggaggatct 224

                                                                       
Query: 182 cccttgggttgtcaaacaagagggctaccagggcacgcatttcaatgatgcctgtcggca 241
           | || || || ||||||||||||||||||||||| |||||||||||||||||||| || |
Sbjct: 225 ctctgggattatcaaacaagagggctaccagggcgcgcatttcaatgatgcctgttggta 284

                                                                       
Query: 242 caccacgggtaccttacagaacacctggtgaaggaacctggcagtggcttgacatatgga 301
           |||||||||| |||||||||||||||||||||||||| ||||| |||||||| |||||||
Sbjct: 285 caccacgggtgccttacagaacacctggtgaaggaacttggcaatggcttgatatatgga 344

                                                                       
Query: 302 atgctttatatcgtgaacggattatcttcattggggacaatattgatgaagaattcagta 361
           ||||| ||||||| ||||| ||||||||||||||||||| ||| |||||||| || ||||
Sbjct: 345 atgctctatatcgcgaacgaattatcttcattggggacagtatagatgaagagtttagta 404

                                                                       
Query: 362 accaagtactggcaagcatgctgtatcttgacagtgtcgacgacacaaagaagattcttc 421
           |||||||| |||| |||||| ||||||||||||| || ||  |||| || ||||||||||
Sbjct: 405 accaagtattggcgagcatgttgtatcttgacagcgttgataacactaaaaagattcttc 464

                                                                       
Query: 422 tatacatcaacggtccaggaggagatcttacaccatgcatggcgttatatgataccatgc 481
           ||||||| || |||||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 465 tatacattaatggtccaggaggagatcttacaccatgcatggcattatatgatacaatgc 524

                                                                       
Query: 482 taagcctaaagagtccaattggtacccattgcctgggctttgcattcaacttggcaggat 541
           |||||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 525 taagcctaaaaagtcctattggtactcattgcctgggctttgcattcaacttggcaggat 584

                                                                       
Query: 542 tcattcttgcagctggtcaaaagggttcacgtactggtatgcctctttgccgtgtttcac 601
           | ||||||||||||||| |||||||||||||||| |||||||||||||||||  ||||||
Sbjct: 585 ttattcttgcagctggtgaaaagggttcacgtacgggtatgcctctttgccggatttcac 644

                                                            
Query: 602 ttcagtcacctgctggggcagctcgaggccaggctgatgatatagaaaa 650
           |||||||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 645 ttcagtcacctgctggagcagctcgagggcaggctgatgatatagaaaa 693

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>dbj|AK099815.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013099L17, full
           insert sequence
          Length = 1243

 Score =  807 bits (407), Expect = 0.0
 Identities = 589/649 (90%), Gaps = 3/649 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   cggcgcccgccaactcctcctgcttccacccccgcgccgtcgcc---agctcgccctcct 61
           ||||||| || |||||||||||||||||||| ||||||| ||||   ||| ||||||| |
Sbjct: 63  cggcgccggcgaactcctcctgcttccacccgcgcgccgccgccgccagcgcgccctcat 122

                                                                       
Query: 62  ctctcagcgtgggcaccaaggtcttcgtcgggctgaaggcgcagacgaggctcggctcgt 121
           |||||||||||||||||||||||||||||||| ||||||| ||||| | ||| |||||||
Sbjct: 123 ctctcagcgtgggcaccaaggtcttcgtcgggttgaaggcccagaccaagctaggctcgt 182

                                                                       
Query: 122 cagagtcgtcgtgcccgaacgtcaacgcccggttctacaccgccgtcaaccggagggtct 181
           | ||||||||||||||||| |||| |||| |||||||||||||||||||||||||| |||
Sbjct: 183 cggagtcgtcgtgcccgaatgtcaccgccgggttctacaccgccgtcaaccggaggatct 242

                                                                       
Query: 182 cccttgggttgtcaaacaagagggctaccagggcacgcatttcaatgatgcctgtcggca 241
           | || || || ||||||||||||||||||||||| |||||||||||||||||||| || |
Sbjct: 243 ctctgggattatcaaacaagagggctaccagggcgcgcatttcaatgatgcctgttggta 302

                                                                       
Query: 242 caccacgggtaccttacagaacacctggtgaaggaacctggcagtggcttgacatatgga 301
           |||||||||| |||||||||||||||||||||||||| ||||| |||||||| |||||||
Sbjct: 303 caccacgggtgccttacagaacacctggtgaaggaacttggcaatggcttgatatatgga 362

                                                                       
Query: 302 atgctttatatcgtgaacggattatcttcattggggacaatattgatgaagaattcagta 361
           ||||| ||||||| ||||| ||||||||||||||||||| ||| |||||||| || ||||
Sbjct: 363 atgctctatatcgcgaacgaattatcttcattggggacagtatagatgaagagtttagta 422

                                                                       
Query: 362 accaagtactggcaagcatgctgtatcttgacagtgtcgacgacacaaagaagattcttc 421
           |||||||| |||| |||||| ||||||||||||| || ||  |||| || ||||||||||
Sbjct: 423 accaagtattggcgagcatgttgtatcttgacagcgttgataacactaaaaagattcttc 482

                                                                       
Query: 422 tatacatcaacggtccaggaggagatcttacaccatgcatggcgttatatgataccatgc 481
           ||||||| || |||||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 483 tatacattaatggtccaggaggagatcttacaccatgcatggcattatatgatacaatgc 542

                                                                       
Query: 482 taagcctaaagagtccaattggtacccattgcctgggctttgcattcaacttggcaggat 541
           |||||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 543 taagcctaaaaagtcctattggtactcattgcctgggctttgcattcaacttggcaggat 602

                                                                       
Query: 542 tcattcttgcagctggtcaaaagggttcacgtactggtatgcctctttgccgtgtttcac 601
           | ||||||||||||||| |||||||||||||||| |||||||||||||||||  ||||||
Sbjct: 603 ttattcttgcagctggtgaaaagggttcacgtacgggtatgcctctttgccggatttcac 662

                                                            
Query: 602 ttcagtcacctgctggggcagctcgaggccaggctgatgatatagaaaa 650
           |||||||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 663 ttcagtcacctgctggagcagctcgagggcaggctgatgatatagaaaa 711

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>dbj|AK061385.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-A01, full
           insert sequence
          Length = 1133

 Score =  807 bits (407), Expect = 0.0
 Identities = 589/649 (90%), Gaps = 3/649 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   cggcgcccgccaactcctcctgcttccacccccgcgccgtcgcc---agctcgccctcct 61
           ||||||| || |||||||||||||||||||| ||||||| ||||   ||| ||||||| |
Sbjct: 45  cggcgccggcgaactcctcctgcttccacccgcgcgccgccgccgccagcgcgccctcat 104

                                                                       
Query: 62  ctctcagcgtgggcaccaaggtcttcgtcgggctgaaggcgcagacgaggctcggctcgt 121
           |||||||||||||||||||||||||||||||| ||||||| ||||| | ||| |||||||
Sbjct: 105 ctctcagcgtgggcaccaaggtcttcgtcgggttgaaggcccagaccaagctaggctcgt 164

                                                                       
Query: 122 cagagtcgtcgtgcccgaacgtcaacgcccggttctacaccgccgtcaaccggagggtct 181
           | ||||||||||||||||| |||| |||| |||||||||||||||||||||||||| |||
Sbjct: 165 cggagtcgtcgtgcccgaatgtcaccgccgggttctacaccgccgtcaaccggaggatct 224

                                                                       
Query: 182 cccttgggttgtcaaacaagagggctaccagggcacgcatttcaatgatgcctgtcggca 241
           | || || || ||||||||||||||||||||||| |||||||||||||||||||| || |
Sbjct: 225 ctctgggattatcaaacaagagggctaccagggcgcgcatttcaatgatgcctgttggta 284

                                                                       
Query: 242 caccacgggtaccttacagaacacctggtgaaggaacctggcagtggcttgacatatgga 301
           |||||||||| |||||||||||||||||||||||||| ||||| |||||||| |||||||
Sbjct: 285 caccacgggtgccttacagaacacctggtgaaggaacttggcaatggcttgatatatgga 344

                                                                       
Query: 302 atgctttatatcgtgaacggattatcttcattggggacaatattgatgaagaattcagta 361
           ||||| ||||||| ||||| ||||||||||||||||||| ||| |||||||| || ||||
Sbjct: 345 atgctctatatcgcgaacgaattatcttcattggggacagtatagatgaagagtttagta 404

                                                                       
Query: 362 accaagtactggcaagcatgctgtatcttgacagtgtcgacgacacaaagaagattcttc 421
           |||||||| |||| |||||| ||||||||||||| || ||  |||| || ||||||||||
Sbjct: 405 accaagtattggcgagcatgttgtatcttgacagcgttgataacactaaaaagattcttc 464

                                                                       
Query: 422 tatacatcaacggtccaggaggagatcttacaccatgcatggcgttatatgataccatgc 481
           ||||||| || |||||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 465 tatacattaatggtccaggaggagatcttacaccatgcatggcattatatgatacaatgc 524

                                                                       
Query: 482 taagcctaaagagtccaattggtacccattgcctgggctttgcattcaacttggcaggat 541
           |||||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 525 taagcctaaaaagtcctattggtactcattgcctgggctttgcattcaacttggcaggat 584

                                                                       
Query: 542 tcattcttgcagctggtcaaaagggttcacgtactggtatgcctctttgccgtgtttcac 601
           | ||||||||||||||| |||||||||||||||| |||||||||||||||||  ||||||
Sbjct: 585 ttattcttgcagctggtgaaaagggttcacgtacgggtatgcctctttgccggatttcac 644

                                                            
Query: 602 ttcagtcacctgctggggcagctcgaggccaggctgatgatatagaaaa 650
           |||||||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 645 ttcagtcacctgctggagcagctcgagggcaggctgatgatatagaaaa 693

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>gb|BT017217.1| Zea mays clone EL01N0372E04.c mRNA sequence
          Length = 1252

 Score =  519 bits (262), Expect = e-144
 Identities = 553/650 (85%)
 Strand = Plus / Plus

                                                                       
Query: 5   cggcgcccgccaactcctcctgcttccacccccgcgccgtcgccagctcgccctcctctc 64
           ||||||| |||| |||||| ||||||||||| |||||   ||||||| |||| || ||||
Sbjct: 51  cggcgccggccagctcctcatgcttccacccacgcgcgaccgccagcccgccgtcttctc 110

                                                                       
Query: 65  tcagcgtgggcaccaaggtcttcgtcgggctgaaggcgcagacgaggctcggctcgtcag 124
           ||||||| ||||||||||||||||||||||| | ||||||||| | |||||| ||||| |
Sbjct: 111 tcagcgtcggcaccaaggtcttcgtcgggctcagggcgcagaccaagctcggttcgtcgg 170

                                                                       
Query: 125 agtcgtcgtgcccgaacgtcaacgcccggttctacaccgccgtcaaccggagggtctccc 184
           ||||||| |||||||| |||| |||  ||||| |||| || |||||||||||  |||| |
Sbjct: 171 agtcgtcatgcccgaatgtcagcgctgggttccacactgcggtcaaccggagaatctctc 230

                                                                       
Query: 185 ttgggttgtcaaacaagagggctaccagggcacgcatttcaatgatgcctgtcggcacac 244
           |  ||||||| || |||| ||| ||||| || ||||| || ||||||||| | || || |
Sbjct: 231 tcaggttgtccaaaaagaaggcgaccagagcccgcatctcgatgatgcctattggtactc 290

                                                                       
Query: 245 cacgggtaccttacagaacacctggtgaaggaacctggcagtggcttgacatatggaatg 304
           |||| || |||||| ||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 291 cacgtgtgccttaccgaacacctggtgaaggaacctggcaatggcttgacatatggaacg 350

                                                                       
Query: 305 ctttatatcgtgaacggattatcttcattggggacaatattgatgaagaattcagtaacc 364
           || | || ||||| |||||||||||||||||||||||||| |||||||||||||| ||||
Sbjct: 351 ctctgtaccgtgagcggattatcttcattggggacaatatagatgaagaattcagcaacc 410

                                                                       
Query: 365 aagtactggcaagcatgctgtatcttgacagtgtcgacgacacaaagaagattcttctat 424
           ||||  ||||||||||||| |||||||||||  | ||  |  | || |||||  | ||||
Sbjct: 411 aagtgttggcaagcatgctctatcttgacagcattgataattccaaaaagataatgctat 470

                                                                       
Query: 425 acatcaacggtccaggaggagatcttacaccatgcatggcgttatatgataccatgctaa 484
           |||| || || ||||||||||||||||| || || |||||  ||||||||||||||||||
Sbjct: 471 acattaatggaccaggaggagatcttactccgtgtatggcactatatgataccatgctaa 530

                                                                       
Query: 485 gcctaaagagtccaattggtacccattgcctgggctttgcattcaacttggcaggattca 544
           | ||||| ||||| ||||| || || ||| ||||||||||||||||| ||||||||||||
Sbjct: 531 gtctaaaaagtcctattggcactcactgcttgggctttgcattcaacctggcaggattca 590

                                                                       
Query: 545 ttcttgcagctggtcaaaagggttcacgtactggtatgcctctttgccgtgtttcacttc 604
           | |||||||| ||| ||||||||||||| |||||||||||||| |||||  ||||||| |
Sbjct: 591 tccttgcagccggtgaaaagggttcacgcactggtatgcctctatgccggatttcactcc 650

                                                             
Query: 605 agtcacctgctggggcagctcgaggccaggctgatgatatagaaaacgaa 654
           | |||||||| || ||||||||||| |||||||| |||||||||||||||
Sbjct: 651 aatcacctgccggagcagctcgaggacaggctgacgatatagaaaacgaa 700

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>gb|AY105157.1| Zea mays PCO115092 mRNA sequence
          Length = 481

 Score =  331 bits (167), Expect = 2e-87
 Identities = 335/391 (85%)
 Strand = Plus / Plus

                                                                       
Query: 5   cggcgcccgccaactcctcctgcttccacccccgcgccgtcgccagctcgccctcctctc 64
           ||||||| |||| |||||| ||||||||||| |||||   ||||||| |||| || ||||
Sbjct: 54  cggcgccggccagctcctcatgcttccacccacgcgcgaccgccagcccgccgtcttctc 113

                                                                       
Query: 65  tcagcgtgggcaccaaggtcttcgtcgggctgaaggcgcagacgaggctcggctcgtcag 124
           ||||||| ||||||||||||||||||||||| | ||||||||| | |||||| ||||| |
Sbjct: 114 tcagcgtcggcaccaaggtcttcgtcgggctcagggcgcagaccaagctcggttcgtcgg 173

                                                                       
Query: 125 agtcgtcgtgcccgaacgtcaacgcccggttctacaccgccgtcaaccggagggtctccc 184
           ||||||| |||||||| |||| |||  ||||| |||| || |||||||||||  |||| |
Sbjct: 174 agtcgtcatgcccgaatgtcagcgctgggttccacactgcggtcaaccggagaatctctc 233

                                                                       
Query: 185 ttgggttgtcaaacaagagggctaccagggcacgcatttcaatgatgcctgtcggcacac 244
           |  ||||||| || |||| ||| ||||| || ||||| || ||||||||| | || || |
Sbjct: 234 tcaggttgtccaaaaagaaggcgaccagagcccgcatctcgatgatgcctattggtactc 293

                                                                       
Query: 245 cacgggtaccttacagaacacctggtgaaggaacctggcagtggcttgacatatggaatg 304
           |||| || |||||| ||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 294 cacgtgtgccttaccgaacacctggtgaaggaacctggcaatggcttgacatatggaacg 353

                                                                       
Query: 305 ctttatatcgtgaacggattatcttcattggggacaatattgatgaagaattcagtaacc 364
           || | || ||||| |||||||||||||||||||||||||| |||||||||||||| ||||
Sbjct: 354 ctctgtaccgtgagcggattatcttcattggggacaatatagatgaagaattcagcaacc 413

                                          
Query: 365 aagtactggcaagcatgctgtatcttgacag 395
           ||||  ||||||||||||| |||||||||||
Sbjct: 414 aagtgttggcaagcatgctctatcttgacag 444

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>gb|AY105451.1| Zea mays PCO122767 mRNA sequence
          Length = 709

 Score =  244 bits (123), Expect = 3e-61
 Identities = 258/303 (85%)
 Strand = Plus / Plus

                                                                       
Query: 352 gaattcagtaaccaagtactggcaagcatgctgtatcttgacagtgtcgacgacacaaag 411
           |||||||| ||||||||  ||||||||||||| |||||||||||  | ||  |  | || 
Sbjct: 11  gaattcagcaaccaagtgttggcaagcatgctctatcttgacagcattgataattccaaa 70

                                                                       
Query: 412 aagattcttctatacatcaacggtccaggaggagatcttacaccatgcatggcgttatat 471
           |||||  | |||||||| || || ||||||||||||||||| || || |||||  |||||
Sbjct: 71  aagataatgctatacattaatggaccaggaggagatcttactccgtgtatggcactatat 130

                                                                       
Query: 472 gataccatgctaagcctaaagagtccaattggtacccattgcctgggctttgcattcaac 531
           |||||||||||||| ||||| ||||| ||||| || || ||| |||||||||||||||||
Sbjct: 131 gataccatgctaagtctaaaaagtcctattggcactcactgcttgggctttgcattcaac 190

                                                                       
Query: 532 ttggcaggattcattcttgcagctggtcaaaagggttcacgtactggtatgcctctttgc 591
            ||||||||||||| |||||||| ||| ||||||||||||| |||||||||||||| |||
Sbjct: 191 ctggcaggattcatccttgcagccggtgaaaagggttcacgcactggtatgcctctatgc 250

                                                                       
Query: 592 cgtgtttcacttcagtcacctgctggggcagctcgaggccaggctgatgatatagaaaac 651
           ||  ||||||| || |||||||| || ||||||||||| |||||||| ||||||||||||
Sbjct: 251 cggatttcactccaatcacctgccggagcagctcgaggacaggctgacgatatagaaaac 310

              
Query: 652 gaa 654
           |||
Sbjct: 311 gaa 313

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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score =  178 bits (90), Expect = 2e-41
 Identities = 111/118 (94%)
 Strand = Plus / Plus

                                                                           
Query: 448     cttacaccatgcatggcgttatatgataccatgctaagcctaaagagtccaattggtacc 507
               ||||||||||||||||| ||||||||||| |||||||||||||| ||||| |||||||| 
Sbjct: 1951074 cttacaccatgcatggcattatatgatacaatgctaagcctaaaaagtcctattggtact 1951133

                                                                         
Query: 508     cattgcctgggctttgcattcaacttggcaggattcattcttgcagctggtcaaaagg 565
               ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||
Sbjct: 1951134 cattgcctgggctttgcattcaacttggcaggatttattcttgcagctggtgaaaagg 1951191



 Score =  170 bits (86), Expect = 4e-39
 Identities = 107/114 (93%)
 Strand = Plus / Plus

                                                                           
Query: 193     tcaaacaagagggctaccagggcacgcatttcaatgatgcctgtcggcacaccacgggta 252
               ||||||||||||||||||||||| |||||||||||||||||||| || ||||||||||| 
Sbjct: 1949403 tcaaacaagagggctaccagggcgcgcatttcaatgatgcctgttggtacaccacgggtg 1949462

                                                                     
Query: 253     ccttacagaacacctggtgaaggaacctggcagtggcttgacatatggaatgct 306
               |||||||||||||||||||||||||| ||||| |||||||| ||||||||||||
Sbjct: 1949463 ccttacagaacacctggtgaaggaacttggcaatggcttgatatatggaatgct 1949516



 Score =  139 bits (70), Expect = 1e-29
 Identities = 121/138 (87%)
 Strand = Plus / Plus

                                                                           
Query: 310     tatcgtgaacggattatcttcattggggacaatattgatgaagaattcagtaaccaagta 369
               ||||| ||||| ||||||||||||||||||| ||| |||||||| || ||||||||||||
Sbjct: 1949630 tatcgcgaacgaattatcttcattggggacagtatagatgaagagtttagtaaccaagta 1949689

                                                                           
Query: 370     ctggcaagcatgctgtatcttgacagtgtcgacgacacaaagaagattcttctatacatc 429
                |||| |||||| ||||||||||||| || ||  |||| || ||||||||||||||||| 
Sbjct: 1949690 ttggcgagcatgttgtatcttgacagcgttgataacactaaaaagattcttctatacatt 1949749

                                 
Query: 430     aacggtccaggaggagat 447
               || |||||||||||||||
Sbjct: 1949750 aatggtccaggaggagat 1949767



 Score =  105 bits (53), Expect = 2e-19
 Identities = 68/73 (93%)
 Strand = Plus / Plus

                                                                           
Query: 562     aagggttcacgtactggtatgcctctttgccgtgtttcacttcagtcacctgctggggca 621
               |||||||||||||| |||||||||||||||||  |||||||||||||||||||||| |||
Sbjct: 1951279 aagggttcacgtacgggtatgcctctttgccggatttcacttcagtcacctgctggagca 1951338

                            
Query: 622     gctcgaggccagg 634
               |||||||| ||||
Sbjct: 1951339 gctcgagggcagg 1951351



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 63/68 (92%)
 Strand = Plus / Plus

                                                                           
Query: 115     ggctcgtcagagtcgtcgtgcccgaacgtcaacgcccggttctacaccgccgtcaaccgg 174
               |||||||| ||||||||||||||||| |||| |||| |||||||||||||||||||||||
Sbjct: 1948856 ggctcgtcggagtcgtcgtgcccgaatgtcaccgccgggttctacaccgccgtcaaccgg 1948915

                       
Query: 175     agggtctc 182
               ||| ||||
Sbjct: 1948916 aggatctc 1948923



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 40/42 (95%)
 Strand = Plus / Plus

                                                         
Query: 66      cagcgtgggcaccaaggtcttcgtcgggctgaaggcgcagac 107
               |||||||||||||||||||||||||||| ||||||| |||||
Sbjct: 1948699 cagcgtgggcaccaaggtcttcgtcgggttgaaggcccagac 1948740



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 58/67 (86%), Gaps = 3/67 (4%)
 Strand = Plus / Plus

                                                                           
Query: 5       cggcgcccgccaactcctcctgcttccacccccg---cgccgtcgccagctcgccctcct 61
               ||||||| || |||||||||||||||||||| ||   ||||| ||||||| ||||||| |
Sbjct: 1948513 cggcgccggcgaactcctcctgcttccacccgcgcgccgccgccgccagcgcgccctcat 1948572

                      
Query: 62      ctctcag 68
               |||||||
Sbjct: 1948573 ctctcag 1948579



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 631     caggctgatgatatagaaaa 650
               ||||||||||||||||||||
Sbjct: 1951451 caggctgatgatatagaaaa 1951470

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>dbj|AP003526.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0548D03
          Length = 156709

 Score =  178 bits (90), Expect = 2e-41
 Identities = 111/118 (94%)
 Strand = Plus / Plus

                                                                         
Query: 448   cttacaccatgcatggcgttatatgataccatgctaagcctaaagagtccaattggtacc 507
             ||||||||||||||||| ||||||||||| |||||||||||||| ||||| |||||||| 
Sbjct: 79854 cttacaccatgcatggcattatatgatacaatgctaagcctaaaaagtcctattggtact 79913

                                                                       
Query: 508   cattgcctgggctttgcattcaacttggcaggattcattcttgcagctggtcaaaagg 565
             ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||
Sbjct: 79914 cattgcctgggctttgcattcaacttggcaggatttattcttgcagctggtgaaaagg 79971



 Score =  170 bits (86), Expect = 4e-39
 Identities = 107/114 (93%)
 Strand = Plus / Plus

                                                                         
Query: 193   tcaaacaagagggctaccagggcacgcatttcaatgatgcctgtcggcacaccacgggta 252
             ||||||||||||||||||||||| |||||||||||||||||||| || ||||||||||| 
Sbjct: 78183 tcaaacaagagggctaccagggcgcgcatttcaatgatgcctgttggtacaccacgggtg 78242

                                                                   
Query: 253   ccttacagaacacctggtgaaggaacctggcagtggcttgacatatggaatgct 306
             |||||||||||||||||||||||||| ||||| |||||||| ||||||||||||
Sbjct: 78243 ccttacagaacacctggtgaaggaacttggcaatggcttgatatatggaatgct 78296



 Score =  139 bits (70), Expect = 1e-29
 Identities = 121/138 (87%)
 Strand = Plus / Plus

                                                                         
Query: 310   tatcgtgaacggattatcttcattggggacaatattgatgaagaattcagtaaccaagta 369
             ||||| ||||| ||||||||||||||||||| ||| |||||||| || ||||||||||||
Sbjct: 78410 tatcgcgaacgaattatcttcattggggacagtatagatgaagagtttagtaaccaagta 78469

                                                                         
Query: 370   ctggcaagcatgctgtatcttgacagtgtcgacgacacaaagaagattcttctatacatc 429
              |||| |||||| ||||||||||||| || ||  |||| || ||||||||||||||||| 
Sbjct: 78470 ttggcgagcatgttgtatcttgacagcgttgataacactaaaaagattcttctatacatt 78529

                               
Query: 430   aacggtccaggaggagat 447
             || |||||||||||||||
Sbjct: 78530 aatggtccaggaggagat 78547



 Score =  105 bits (53), Expect = 2e-19
 Identities = 68/73 (93%)
 Strand = Plus / Plus

                                                                         
Query: 562   aagggttcacgtactggtatgcctctttgccgtgtttcacttcagtcacctgctggggca 621
             |||||||||||||| |||||||||||||||||  |||||||||||||||||||||| |||
Sbjct: 80059 aagggttcacgtacgggtatgcctctttgccggatttcacttcagtcacctgctggagca 80118

                          
Query: 622   gctcgaggccagg 634
             |||||||| ||||
Sbjct: 80119 gctcgagggcagg 80131



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 63/68 (92%)
 Strand = Plus / Plus

                                                                         
Query: 115   ggctcgtcagagtcgtcgtgcccgaacgtcaacgcccggttctacaccgccgtcaaccgg 174
             |||||||| ||||||||||||||||| |||| |||| |||||||||||||||||||||||
Sbjct: 77636 ggctcgtcggagtcgtcgtgcccgaatgtcaccgccgggttctacaccgccgtcaaccgg 77695

                     
Query: 175   agggtctc 182
             ||| ||||
Sbjct: 77696 aggatctc 77703



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 40/42 (95%)
 Strand = Plus / Plus

                                                       
Query: 66    cagcgtgggcaccaaggtcttcgtcgggctgaaggcgcagac 107
             |||||||||||||||||||||||||||| ||||||| |||||
Sbjct: 77479 cagcgtgggcaccaaggtcttcgtcgggttgaaggcccagac 77520



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 58/67 (86%), Gaps = 3/67 (4%)
 Strand = Plus / Plus

                                                                         
Query: 5     cggcgcccgccaactcctcctgcttccacccccg---cgccgtcgccagctcgccctcct 61
             ||||||| || |||||||||||||||||||| ||   ||||| ||||||| ||||||| |
Sbjct: 77293 cggcgccggcgaactcctcctgcttccacccgcgcgccgccgccgccagcgcgccctcat 77352

                    
Query: 62    ctctcag 68
             |||||||
Sbjct: 77353 ctctcag 77359



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 631   caggctgatgatatagaaaa 650
             ||||||||||||||||||||
Sbjct: 80231 caggctgatgatatagaaaa 80250

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>gb|AC152498.11| Medicago truncatula clone mth2-38m20, complete sequence
          Length = 127132

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                            
Query: 259   agaacacctggtgaaggaacctggcagtggcttgacatatggaatgc 305
             |||||||||||||||||||| ||||| ||| ||||  ||||||||||
Sbjct: 37162 agaacacctggtgaaggaacttggcaatgggttgatttatggaatgc 37116



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                  
Query: 346   gatgaagaattcagtaaccaagtactggcaagcatgctgtatcttgacagtgt 398
             ||||||||||| || || ||| || ||||||   |||||||||||||||||||
Sbjct: 36892 gatgaagaattaagcaatcaaatattggcaactttgctgtatcttgacagtgt 36840

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>gb|AC139211.13| Mus musculus chromosome 6, clone RP23-302O24, complete sequence
          Length = 154129

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 629    gccaggctgatgatatagaaaac 651
              |||||||||||||||||||||||
Sbjct: 148708 gccaggctgatgatatagaaaac 148686

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>gb|AY279311.1| Malus x domestica ATP-dependent Clp protease proteolytic subunit
           mRNA, partial cds
          Length = 364

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 604 cagtcacctgctggggcagctcgaggccaggctgatgatatagaaaa 650
           ||||| ||||| ||||| ||||| || ||||||||||||||| ||||
Sbjct: 100 cagtctcctgccggggctgctcgtggtcaggctgatgatatacaaaa 146

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>gb|AC158683.2| Mus musculus 6 BAC RP23-328P16 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 203488

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 629    gccaggctgatgatatagaaaac 651
              |||||||||||||||||||||||
Sbjct: 143768 gccaggctgatgatatagaaaac 143790

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>gb|AY665221.1| Saimiri boliviensis reticulon 1 mRNA, partial cds
          Length = 263

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 617 gggcagctcgaggccaggctg 637
           |||||||||||||||||||||
Sbjct: 262 gggcagctcgaggccaggctg 242

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>ref|NM_101113.2| Arabidopsis thaliana CLPR2; endopeptidase Clp AT1G12410 (CLPR2)
           mRNA, complete cds
          Length = 1062

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 604 cagtcacctgctggggcagctcgaggccaggctgatgatat 644
           |||||||| ||||| ||||| || || ||||||||||||||
Sbjct: 639 cagtcaccagctggtgcagcccgtggtcaggctgatgatat 679

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>tpg|BK001692.1| TPA: TPA_inf: Ateles belzebuth chamek RTN1-Aw (RTN1) mRNA, partial
           cds; alternatively spliced
          Length = 263

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 617 gggcagctcgaggccaggctg 637
           |||||||||||||||||||||
Sbjct: 262 gggcagctcgaggccaggctg 242

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>gb|AY081641.1| Arabidopsis thaliana similar to nClpP2 dbj|BAA82066.1 (At1g12410)
           mRNA, complete cds
          Length = 871

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 604 cagtcacctgctggggcagctcgaggccaggctgatgatat 644
           |||||||| ||||| ||||| || || ||||||||||||||
Sbjct: 577 cagtcaccagctggtgcagcccgtggtcaggctgatgatat 617

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>gb|AY062770.1| Arabidopsis thaliana similar to nClpP2 (At1g12410; F5O11.13) mRNA,
           complete cds
          Length = 968

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 604 cagtcacctgctggggcagctcgaggccaggctgatgatat 644
           |||||||| ||||| ||||| || || ||||||||||||||
Sbjct: 624 cagtcaccagctggtgcagcccgtggtcaggctgatgatat 664

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>gb|AY057617.1| Arabidopsis thaliana At1g12410/F5O11_7 mRNA, complete cds
          Length = 994

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 604 cagtcacctgctggggcagctcgaggccaggctgatgatat 644
           |||||||| ||||| ||||| || || ||||||||||||||
Sbjct: 635 cagtcaccagctggtgcagcccgtggtcaggctgatgatat 675

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>emb|BX813571.1|CNS0AAJF Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB24ZH11 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 964

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 604 cagtcacctgctggggcagctcgaggccaggctgatgatat 644
           |||||||| ||||| ||||| || || ||||||||||||||
Sbjct: 577 cagtcaccagctggtgcagcccgtggtcaggctgatgatat 617

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>emb|BX841886.1|CNS09Y1Z Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL12ZA05 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 1001

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 604 cagtcacctgctggggcagctcgaggccaggctgatgatat 644
           |||||||| ||||| ||||| || || ||||||||||||||
Sbjct: 614 cagtcaccagctggtgcagcccgtggtcaggctgatgatat 654

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>emb|BX842500.1|CNS0ABM0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH3ZD08 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 708

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 604 cagtcacctgctggggcagctcgaggccaggctgatgatat 644
           |||||||| ||||| ||||| || || ||||||||||||||
Sbjct: 361 cagtcaccagctggtgcagcccgtggtcaggctgatgatat 401

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>gb|AF029167.1|AF029167 Ateles paniscus chamek neuroendocrine-specific protein (NSP) gene,
           partial cds
          Length = 263

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 617 gggcagctcgaggccaggctg 637
           |||||||||||||||||||||
Sbjct: 262 gggcagctcgaggccaggctg 242

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>dbj|AB022327.1| Arabidopsis thaliana mRNA for nClpP2 (nuclear encoded ClpP2),
           complete cds
          Length = 999

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 604 cagtcacctgctggggcagctcgaggccaggctgatgatat 644
           |||||||| ||||| ||||| || || ||||||||||||||
Sbjct: 615 cagtcaccagctggtgcagcccgtggtcaggctgatgatat 655

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>ref|NM_193865.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 225

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 45  cgccagctcgccctcctctc 64
           ||||||||||||||||||||
Sbjct: 192 cgccagctcgccctcctctc 173

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>emb|AL356215.11| Human DNA sequence from clone RP4-607I7 on chromosome 11p11.2-12
             Contains the start of the CD44 (CD44 antigen (homing
             function andnIndian blood group system)) gene, ESTs, STSs,
             GSSs and a CpG island, complete sequence
          Length = 150533

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 614   ctggggcagctcgaggccaggctg 637
             ||||||||||| ||||||||||||
Sbjct: 65302 ctggggcagcttgaggccaggctg 65325

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>gb|AC091535.2| Takifugu rubripes clone 241F4, complete sequence
          Length = 71409

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 598   tcacttcagtcacctgctgg 617
             ||||||||||||||||||||
Sbjct: 66331 tcacttcagtcacctgctgg 66350

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>emb|AL109612.7|HSJ1018A4 Human DNA sequence from clone RP5-1018A4 on chromosome 6q12-13 Contains
             part of a novel gene, part of the gene for a novel
             EGF-like domain containing protein and a novel gene,
             complete sequence
          Length = 106273

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 408   aaagaagattcttctataca 427
             ||||||||||||||||||||
Sbjct: 93371 aaagaagattcttctataca 93390

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>gb|AC134473.4| Mus musculus BAC clone RP23-190G18 from chromosome 3, complete sequence
          Length = 212795

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 506    cccattgcctgggctttgca 525
              ||||||||||||||||||||
Sbjct: 116167 cccattgcctgggctttgca 116148

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>emb|AJ632270.1| Actinoplanes teichomyceticus teicoplanin gene cluster
          Length = 89976

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 37    cgcgccgtcgccagctcgccctcc 60
             ||||||||||||||||| ||||||
Sbjct: 79820 cgcgccgtcgccagctccccctcc 79797

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>emb|AJ605139.1| Actinoplanes teichomyceticus gene cluster for biosynthesis of
             glycopeptide antibiotic teicoplanin
          Length = 89713

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 37    cgcgccgtcgccagctcgccctcc 60
             ||||||||||||||||| ||||||
Sbjct: 81638 cgcgccgtcgccagctccccctcc 81615

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>gb|AC164439.4| Mus musculus BAC clone RP23-31B24 from chromosome 3, complete sequence
          Length = 206717

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 506    cccattgcctgggctttgca 525
              ||||||||||||||||||||
Sbjct: 206453 cccattgcctgggctttgca 206472

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>emb|AJ252202.1|DME252202 Drosophila melanogaster D-COQ7 gene for putative COQ7 isologue, exons
            1-3
          Length = 2586

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 201  gagggctaccagggcacgca 220
            ||||||||||||||||||||
Sbjct: 2457 gagggctaccagggcacgca 2438

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>emb|CR382291.11| Zebrafish DNA sequence from clone CH211-245G10, complete sequence
          Length = 159807

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 284   agtggcttgacatatggaat 303
             ||||||||||||||||||||
Sbjct: 82648 agtggcttgacatatggaat 82629

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>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 37      cgcgccgtcgccagctcgcc 56
               ||||||||||||||||||||
Sbjct: 1441102 cgcgccgtcgccagctcgcc 1441083

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>gb|AC023722.4| Drosophila melanogaster X BAC RP98-48O24 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 191590

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 201   gagggctaccagggcacgca 220
             ||||||||||||||||||||
Sbjct: 87446 gagggctaccagggcacgca 87427

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>ref|NM_132121.2| Drosophila melanogaster shifted CG3135-RA (shf), mRNA
          Length = 1803

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 201  gagggctaccagggcacgca 220
            ||||||||||||||||||||
Sbjct: 1263 gagggctaccagggcacgca 1282

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>gb|AY051622.1| Drosophila melanogaster GH27042 full length cDNA
          Length = 1802

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 201  gagggctaccagggcacgca 220
            ||||||||||||||||||||
Sbjct: 1263 gagggctaccagggcacgca 1282

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>tpg|BK000323.1| TPA: TPA_exp: Oryza sativa (indica cultivar-group) transposon
            Rim2-M44, complete sequence
          Length = 2086

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 45   cgccagctcgccctcctctc 64
            ||||||||||||||||||||
Sbjct: 1490 cgccagctcgccctcctctc 1471

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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2,
              complete sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 15     caactcctcctgcttccacc 34
              ||||||||||||||||||||
Sbjct: 419440 caactcctcctgcttccacc 419459

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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 45       cgccagctcgccctcctctc 64
                ||||||||||||||||||||
Sbjct: 15430557 cgccagctcgccctcctctc 15430576

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>gb|AC068614.5| Homo sapiens BAC clone RP11-512N1 from 2, complete sequence
          Length = 164706

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 523    gcattcaacttggcaggatt 542
              ||||||||||||||||||||
Sbjct: 159795 gcattcaacttggcaggatt 159814

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>dbj|AP004769.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0017C12
          Length = 135356

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 15    caactcctcctgcttccacc 34
             ||||||||||||||||||||
Sbjct: 15681 caactcctcctgcttccacc 15700

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>dbj|AP003199.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1045D11
          Length = 142320

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 45     cgccagctcgccctcctctc 64
              ||||||||||||||||||||
Sbjct: 108098 cgccagctcgccctcctctc 108117

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>emb|AL132709.5|CNS01DTB Human chromosome 14 DNA sequence BAC R-909M7 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 200540

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 530    acttggcaggattcattctt 549
              ||||||||||||||||||||
Sbjct: 122338 acttggcaggattcattctt 122357

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>gb|AE003438.3| Drosophila melanogaster chromosome X, section 22 of 74 of the complete
              sequence
          Length = 299943

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 201    gagggctaccagggcacgca 220
              ||||||||||||||||||||
Sbjct: 233437 gagggctaccagggcacgca 233418

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>gb|AC009994.10| Homo sapiens chromosome 17, clone RP11-87N3, complete sequence
          Length = 188552

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 619   gcagctcgaggccaggctga 638
             ||||||||||||||||||||
Sbjct: 90590 gcagctcgaggccaggctga 90609

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>emb|AL672005.7| Mouse DNA sequence from clone RP23-401A9 on chromosome X, complete
             sequence
          Length = 123180

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 15    caactcctcctgcttccacc 34
             ||||||||||||||||||||
Sbjct: 39066 caactcctcctgcttccacc 39085


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,804,033
Number of Sequences: 3902068
Number of extensions: 4804033
Number of successful extensions: 91281
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 91041
Number of HSP's gapped (non-prelim): 237
length of query: 655
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 632
effective length of database: 17,143,297,704
effective search space: 10834564148928
effective search space used: 10834564148928
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result