>IF3A_MAIZE (Q9XHR2) Eukaryotic translation initiation factor 3 subunit 10 (eIF-3|
            theta) (Eukaryotic translation initiation factor 3 large
            subunit) (eIF3a)
          Length = 962

 Score = 42.0 bits (97), Expect = 0.002
 Identities = 25/58 (43%), Positives = 30/58 (51%)
 Frame = +2

Query: 281  SKYVPKWKREGDSSSQRTAVAAETDRWGXXXXXXXXXXXXXXXXXDARPLRQDAPPAR 454
            SKY+PK+KR GDSSS  +  + + DRWG                    PLRQD PPAR
Sbjct: 889  SKYIPKFKRGGDSSSIPSG-SRDEDRWGSRG-----------------PLRQDGPPAR 928

>VND_DROME (P22808) Homeobox protein vnd (Protein ventral nervous system|
           defective) (Homeobox protein NK-2)
          Length = 723

 Score = 33.9 bits (76), Expect = 0.46
 Identities = 23/78 (29%), Positives = 28/78 (35%), Gaps = 2/78 (2%)
 Frame = -2

Query: 530 HRPAGGQGAPLDVXXXXXXXXXXGHHVQEGHLGGGDE--HHAEEELPGGEQGEDDHHAPT 357
           HR  G   +P  +           HH   G  GG  E  HH+  E          HHAP 
Sbjct: 242 HRGQGSHTSPSALSPTPAGVSADEHHNGSGTGGGAGEADHHSTTE----------HHAPP 291

Query: 356 GLFQLQQPSSDCYCHPHV 303
              Q Q P    + HPH+
Sbjct: 292 SHPQQQHPHHQQHHHPHL 309

>NOTC2_HUMAN (Q04721) Neurogenic locus notch homolog protein 2 precursor (Notch 2)|
            (hN2) [Contains: Notch 2 extracellular truncation; Notch
            2 intracellular domain]
          Length = 2471

 Score = 30.8 bits (68), Expect = 3.9
 Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
 Frame = +3

Query: 426  PSAKMPLLHVMSAPSARRLLP-PHVKRRPLPASRTVLLQLHLLNAGVLDLGPLQILHPTP 602
            P A +   H +S  +   + P  H     LP+   +L   H+++ G    G L  LHP P
Sbjct: 2189 PPAPVHAQHALSFSNLHEMQPLAHGASTVLPSVSQLLSHHHIVSPGSGSAGSLSRLHPVP 2248

Query: 603  LP 608
            +P
Sbjct: 2249 VP 2250

>ICEN_ENTAG (P16239) Ice nucleation protein|
          Length = 1258

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 7/67 (10%)
 Frame = -3

Query: 559  PAFSRCSWSSTVRLAGRGRLLTCGGRSLLAEGAD---ITCRRGILAEGTSITQ----RRS 401
            P  ++ + + ++ +AG+G   T G RS L  GAD   +   RG L  G   TQ    R  
Sbjct: 1092 PESTQITGNRSMLIAGKGSSQTAGYRSTLISGADSVQMAGERGKLIAGADSTQTAGDRSK 1151

Query: 400  FLAGSRA 380
             LAG+ +
Sbjct: 1152 LLAGNNS 1158

>ICEA_PANAN (P20469) Ice nucleation protein inaA|
          Length = 1322

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 7/67 (10%)
 Frame = -3

Query: 559  PAFSRCSWSSTVRLAGRGRLLTCGGRSLLAEGAD---ITCRRGILAEGTSITQ----RRS 401
            P  ++ + + ++ +AG+G   T G RS L  GAD   +   RG L  G   TQ    R  
Sbjct: 1156 PESTQITGNRSMLIAGKGSSQTAGYRSTLISGADSVQMAGERGKLIAGADSTQTAGDRSK 1215

Query: 400  FLAGSRA 380
             LAG+ +
Sbjct: 1216 LLAGNNS 1222

>ICEN_PANAN (Q47879) Ice nucleation protein inaU|
          Length = 1034

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 7/67 (10%)
 Frame = -3

Query: 559  PAFSRCSWSSTVRLAGRGRLLTCGGRSLLAEGAD---ITCRRGILAEGTSITQ----RRS 401
            P  ++ + + ++ +AG+G   T G RS L  GAD   +   RG L  G   TQ    R  
Sbjct: 868  PESTQITGNRSMLIAGKGSSQTAGYRSTLISGADSVQMAGERGKLIAGADSTQTAGDRSK 927

Query: 400  FLAGSRA 380
             LAG+ +
Sbjct: 928  LLAGNNS 934

>WASF1_MOUSE (Q8R5H6) Wiskott-Aldrich syndrome protein family member 1|
           (WASP-family protein member 1) (WAVE-1 protein)
          Length = 559

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 24/84 (28%), Positives = 32/84 (38%), Gaps = 4/84 (4%)
 Frame = +3

Query: 426 PSAKMPLLHVMSAPSARRLL----PPHVKRRPLPASRTVLLQLHLLNAGVLDLGPLQILH 593
           P    PL   +S  S R  +    PP V   P P +  +           L + P  +LH
Sbjct: 325 PPPPPPLPSALSTSSLRASMTSTPPPPVPPPPPPPATALQAPAVPPPPAPLQIAP-GVLH 383

Query: 594 PTPLPLAGGAEASWPEMRRALPAC 665
           P P P+A       P + RA P C
Sbjct: 384 PAPPPIAPPLVQPSPPVARAAPVC 407

>WASF1_HUMAN (Q92558) Wiskott-Aldrich syndrome protein family member 1|
           (WASP-family protein member 1) (WAVE-1 protein)
           (Verprolin homology domain-containing protein 1)
          Length = 559

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 24/84 (28%), Positives = 32/84 (38%), Gaps = 4/84 (4%)
 Frame = +3

Query: 426 PSAKMPLLHVMSAPSARRLL----PPHVKRRPLPASRTVLLQLHLLNAGVLDLGPLQILH 593
           P    PL   +S  S R  +    PP V   P P +  +           L + P  +LH
Sbjct: 325 PPPPPPLPSALSTSSLRASMTSTPPPPVPPPPPPPATALQAPAVPPPPAPLQIAP-GVLH 383

Query: 594 PTPLPLAGGAEASWPEMRRALPAC 665
           P P P+A       P + RA P C
Sbjct: 384 PAPPPIAPPLVQPSPPVARAAPVC 407


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,480,334
Number of Sequences: 219361
Number of extensions: 1120728
Number of successful extensions: 3637
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3459
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3628
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6598423128
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)