ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags12n10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_196485.1| Oryza sativa (japonica cultivar-group) hypothet... 488 e-134
2dbj|AK067754.1| Oryza sativa (japonica cultivar-group) cDNA clon... 488 e-134
3gb|AY664417.1| Zea mays cultivar Mo17 locus 9002, complete sequence 174 2e-40
4gb|AY664413.1| Zea mays cultivar B73 locus 9002, complete sequence 168 1e-38
5gb|AC027660.2| Oryza sativa (japonica cultivar-group) chromosome... 131 3e-27
6dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 131 3e-27
7gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 131 3e-27
8gb|BC099942.1| Mus musculus solute carrier family 9 (sodium/hydr... 48 0.033
9dbj|AK156494.1| Mus musculus activated spleen cDNA, RIKEN full-l... 48 0.033
10gb|AC157517.2| Mus musculus BAC clone RP24-69C11 from chromosome... 48 0.033
11ref|NM_177909.3| Mus musculus solute carrier family 9 (sodium/hy... 48 0.033
12ref|NM_103586.3| Arabidopsis thaliana methyltransferase AT1G4511... 44 0.52
13gb|BT010558.1| Arabidopsis thaliana At1g45110 gene, complete cds 44 0.52
14emb|BX814552.1|CNS0AC8P Arabidopsis thaliana Full-length cDNA Co... 44 0.52
15gb|AC007915.3|AC007915 Genomic sequence for Arabidopsis thaliana... 44 0.52
16gb|AY692264.1| Bacteriophage T5 strain st0 deletion mutant, comp... 40 8.1
17gb|AY543070.1| Bacteriophage T5, complete genome 40 8.1
18gb|AC185539.1| Drosophila melanogaster clone BACR22O16, complete... 40 8.1
19gb|AC185536.1| Drosophila melanogaster clone BACR38K14, complete... 40 8.1
20gb|AC122923.4| Mus musculus BAC clone RP23-36G5 from 10, complet... 40 8.1
21emb|AL591435.10| Human DNA sequence from clone RP11-712I22 on ch... 40 8.1
22emb|AL445649.15| Human DNA sequence from clone RP11-381O6 on chr... 40 8.1
23emb|CR380959.1| Candida glabrata strain CBS138 chromosome M comp... 40 8.1
24ref|NM_167760.1| Drosophila melanogaster CG14476-RE, transcript ... 40 8.1
25ref|NM_167759.1| Drosophila melanogaster CG14476-RD, transcript ... 40 8.1
26ref|NM_167758.1| Drosophila melanogaster CG14476-RC, transcript ... 40 8.1
27ref|NM_167757.1| Drosophila melanogaster CG14476-RA, transcript ... 40 8.1
28ref|NM_143888.4| Drosophila melanogaster CG14476-RB, transcript ... 40 8.1
29gb|CP000249.1| Frankia sp. CcI3, complete genome 40 8.1
30gb|AY954234.1| Ranunculus lapponicus voucher J.T. Johansson s.n.... 40 8.1
31emb|BX004973.10| Mouse DNA sequence from clone RP24-260G16 on ch... 40 8.1
32emb|AL845260.15| Mouse DNA sequence from clone RP23-232J15 on ch... 40 8.1
33gb|AF105037.1|AF105037 Murid herpesvirus 4 complete genome 40 8.1
34gb|AY587007.1| Bacteriophage T5 strain ATCC 11303-B5, complete g... 40 8.1
35gb|AF145625.1|AF145625 Drosophila melanogaster clone GH04962 BcD... 40 8.1
36gb|AE003122.5| Drosophila melanogaster chromosome X, section 72 ... 40 8.1
37emb|AL356032.4|CNS05TDD Human chromosome 14 DNA sequence BAC R-8... 40 8.1
38emb|X75922.1|BT5LLP Bacteriophage T5 llp, oad, dmp genes 40 8.1
39gb|AC132435.3| Mus musculus BAC clone RP23-223L12 from 10, compl... 40 8.1
40gb|U97553.1|U97553 Murine herpesvirus 68 strain WUMS, complete g... 40 8.1
41emb|AL355887.4|CNS05TCY Human chromosome 14 DNA sequence BAC R-1... 40 8.1
42emb|AL808017.4| Mouse DNA sequence from clone RP23-145G21 on chr... 40 8.1 
>ref|NM_196485.1| Oryza sativa (japonica cultivar-group) hypothetical protein
           (OSJNBa0045B21.18), mRNA
          Length = 1113

 Score =  488 bits (246), Expect = e-134
 Identities = 456/526 (86%)
 Strand = Plus / Plus

                                                                       
Query: 65  tgtatctagtggcgacacccattgggaacctcgaggatatcaccttgagggcattgcgtg 124
           ||||||| ||||| || || || ||||||||||||||||||||||| |||||||||||| 
Sbjct: 182 tgtatcttgtggcaacgccaatcgggaacctcgaggatatcaccttaagggcattgcgta 241

                                                                       
Query: 125 ttctgaaatgtgcttgtgtgatactctctgaagacacaaggcattctggaaagttacttc 184
           | || |||||||||  ||| ||||| || |||||||||||||||||||||||| ||||||
Sbjct: 242 tcctcaaatgtgctgatgtcatactatcagaagacacaaggcattctggaaagctacttc 301

                                                                       
Query: 185 agcattacaacatcaagacacctcttctcagcttccataagttcaatgagcgcgagagag 244
           | ||||| |||||||||||||||||||||||||| |||||||| |||||||| || ||||
Sbjct: 302 aacattataacatcaagacacctcttctcagctttcataagtttaatgagcgtgaaagag 361

                                                                       
Query: 245 agcccattatcttaaagaggctccatgaaggggaagcaattgcagtgattagtgatgctg 304
           |||| | |||||||||||| || ||||||||||||||| ||||| |||||||||||||||
Sbjct: 362 agcctaatatcttaaagagacttcatgaaggggaagcagttgcattgattagtgatgctg 421

                                                                       
Query: 305 gcactccaggcatcagtgaccctggcatggagctggctagactatgcatgactgaaaaaa 364
           | ||||| || || ||||| ||||||||||| ||||||||||||||    |||||   ||
Sbjct: 422 gtactcctggaattagtgatcctggcatggaactggctagactatgtgctactgagggaa 481

                                                                       
Query: 365 ttcctgttattcccattcctgggccttctgccgcaattgccgctctttctgcatcgggtt 424
           | |||||||| |||||||||||||| ||||| ||||| || |||||||||||||| ||||
Sbjct: 482 tccctgttatccccattcctgggccgtctgctgcaatagctgctctttctgcatctggtt 541

                                                                       
Query: 425 tgccaaccgaggaattcacatttgtgggttttttaccaaagcatggtcgatcaagaaaag 484
           ||||||| || ||||| ||||||||||| |||||||||||||||| ||||||||||||||
Sbjct: 542 tgccaactgatgaatttacatttgtggggtttttaccaaagcatgctcgatcaagaaaag 601

                                                                       
Query: 485 ctaggcttgaggtatctgctcgtgaggctgtgacacaaatattctatgttcctcctcatg 544
             ||||||||  |||||||  || | ||||  |||||||| |||||||||||||| ||||
Sbjct: 602 aaaggcttgaaatatctgcctgtcaagctgccacacaaattttctatgttcctccccatg 661

                                                         
Query: 545 gaattcaacagtttcttgttgatgctgcttcgtcttttggtgattc 590
           ||||||| || ||||||  |||||||||||| || |||||||||||
Sbjct: 662 gaattcaccaatttctttctgatgctgcttcatcatttggtgattc 707
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>dbj|AK067754.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013114M12, full
           insert sequence
          Length = 1599

 Score =  488 bits (246), Expect = e-134
 Identities = 456/526 (86%)
 Strand = Plus / Plus

                                                                       
Query: 65  tgtatctagtggcgacacccattgggaacctcgaggatatcaccttgagggcattgcgtg 124
           ||||||| ||||| || || || ||||||||||||||||||||||| |||||||||||| 
Sbjct: 245 tgtatcttgtggcaacgccaatcgggaacctcgaggatatcaccttaagggcattgcgta 304

                                                                       
Query: 125 ttctgaaatgtgcttgtgtgatactctctgaagacacaaggcattctggaaagttacttc 184
           | || |||||||||  ||| ||||| || |||||||||||||||||||||||| ||||||
Sbjct: 305 tcctcaaatgtgctgatgtcatactatcagaagacacaaggcattctggaaagctacttc 364

                                                                       
Query: 185 agcattacaacatcaagacacctcttctcagcttccataagttcaatgagcgcgagagag 244
           | ||||| |||||||||||||||||||||||||| |||||||| |||||||| || ||||
Sbjct: 365 aacattataacatcaagacacctcttctcagctttcataagtttaatgagcgtgaaagag 424

                                                                       
Query: 245 agcccattatcttaaagaggctccatgaaggggaagcaattgcagtgattagtgatgctg 304
           |||| | |||||||||||| || ||||||||||||||| ||||| |||||||||||||||
Sbjct: 425 agcctaatatcttaaagagacttcatgaaggggaagcagttgcattgattagtgatgctg 484

                                                                       
Query: 305 gcactccaggcatcagtgaccctggcatggagctggctagactatgcatgactgaaaaaa 364
           | ||||| || || ||||| ||||||||||| ||||||||||||||    |||||   ||
Sbjct: 485 gtactcctggaattagtgatcctggcatggaactggctagactatgtgctactgagggaa 544

                                                                       
Query: 365 ttcctgttattcccattcctgggccttctgccgcaattgccgctctttctgcatcgggtt 424
           | |||||||| |||||||||||||| ||||| ||||| || |||||||||||||| ||||
Sbjct: 545 tccctgttatccccattcctgggccgtctgctgcaatagctgctctttctgcatctggtt 604

                                                                       
Query: 425 tgccaaccgaggaattcacatttgtgggttttttaccaaagcatggtcgatcaagaaaag 484
           ||||||| || ||||| ||||||||||| |||||||||||||||| ||||||||||||||
Sbjct: 605 tgccaactgatgaatttacatttgtggggtttttaccaaagcatgctcgatcaagaaaag 664

                                                                       
Query: 485 ctaggcttgaggtatctgctcgtgaggctgtgacacaaatattctatgttcctcctcatg 544
             ||||||||  |||||||  || | ||||  |||||||| |||||||||||||| ||||
Sbjct: 665 aaaggcttgaaatatctgcctgtcaagctgccacacaaattttctatgttcctccccatg 724

                                                         
Query: 545 gaattcaacagtttcttgttgatgctgcttcgtcttttggtgattc 590
           ||||||| || ||||||  |||||||||||| || |||||||||||
Sbjct: 725 gaattcaccaatttctttctgatgctgcttcatcatttggtgattc 770
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>gb|AY664417.1| Zea mays cultivar Mo17 locus 9002, complete sequence
          Length = 366120

 Score =  174 bits (88), Expect = 2e-40
 Identities = 127/140 (90%)
 Strand = Plus / Minus

                                                                          
Query: 451    ggttttttaccaaagcatggtcgatcaagaaaagctaggcttgaggtatctgctcgtgag 510
              ||||||||||||||||||| ||| ||||||| || |||||||||| ||||||||||||| 
Sbjct: 224889 ggttttttaccaaagcatgctcggtcaagaagagataggcttgagatatctgctcgtgaa 224830

                                                                          
Query: 511    gctgtgacacaaatattctatgttcctcctcatggaattcaacagtttcttgttgatgct 570
              ||||  ||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||
Sbjct: 224829 gctgctacacaaatattctatgttcctccccatggcattcagcagtttcttgttgatgct 224770

                                  
Query: 571    gcttcgtcttttggtgattc 590
              ||||| |||||||| |||||
Sbjct: 224769 gcttcatcttttggcgattc 224750



 Score =  135 bits (68), Expect = 2e-28
 Identities = 95/104 (91%)
 Strand = Plus / Minus

                                                                          
Query: 107    ccttgagggcattgcgtgttctgaaatgtgcttgtgtgatactctctgaagacacaaggc 166
              |||| |||||| ||||||| || |||||||||  ||||||||| ||||||||||||||||
Sbjct: 225582 ccttcagggcactgcgtgtcctaaaatgtgctaatgtgatactatctgaagacacaaggc 225523

                                                          
Query: 167    attctggaaagttacttcagcattacaacatcaagacacctctt 210
              |||| |||||| ||||||||||||||||||||||||||||||||
Sbjct: 225522 attcaggaaagctacttcagcattacaacatcaagacacctctt 225479



 Score =  133 bits (67), Expect = 7e-28
 Identities = 112/127 (88%)
 Strand = Plus / Minus

                                                                          
Query: 214    agcttccataagttcaatgagcgcgagagagagcccattatcttaaagaggctccatgaa 273
              ||||||||||||||||| || || ||||||||||||| |||||||| |||||| ||||||
Sbjct: 225400 agcttccataagttcaacgaacgggagagagagcccactatcttaaggaggcttcatgaa 225341

                                                                          
Query: 274    ggggaagcaattgcagtgattagtgatgctggcactccaggcatcagtgaccctggcatg 333
              || |||||| ||||| |||| ||||||||||| || ||||| || |||||||||||||||
Sbjct: 225340 ggtgaagcagttgcactgataagtgatgctgggacgccaggtattagtgaccctggcatg 225281

                     
Query: 334    gagctgg 340
              || ||||
Sbjct: 225280 gaactgg 225274



 Score =  107 bits (54), Expect = 4e-20
 Identities = 84/94 (89%)
 Strand = Plus / Minus

                                                                          
Query: 355    actgaaaaaattcctgttattcccattcctgggccttctgccgcaattgccgctctttct 414
              ||||| ||||| ||||| ||||||||||||||||| ||||| |||||||| |||||||||
Sbjct: 225065 actgagaaaatccctgtcattcccattcctgggccatctgctgcaattgctgctctttct 225006

                                                
Query: 415    gcatcgggtttgccaaccgaggaattcacatttg 448
              ||||||||||||||| |  | |||||||||||||
Sbjct: 225005 gcatcgggtttgccatcaaatgaattcacatttg 224972
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>gb|AY664413.1| Zea mays cultivar B73 locus 9002, complete sequence
          Length = 317137

 Score =  168 bits (85), Expect = 1e-38
 Identities = 124/137 (90%)
 Strand = Plus / Minus

                                                                          
Query: 454    tttttaccaaagcatggtcgatcaagaaaagctaggcttgaggtatctgctcgtgaggct 513
              |||||||||||||||| ||| ||||||| || |||||||||| ||||||||||||| |||
Sbjct: 177098 tttttaccaaagcatgctcggtcaagaagagataggcttgagatatctgctcgtgaagct 177039

                                                                          
Query: 514    gtgacacaaatattctatgttcctcctcatggaattcaacagtttcttgttgatgctgct 573
              |  ||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||
Sbjct: 177038 gctacacaaatattctatgttcctccccatggcattcagcagtttcttgttgatgctgct 176979

                               
Query: 574    tcgtcttttggtgattc 590
              || |||||||| |||||
Sbjct: 176978 tcatcttttggcgattc 176962



 Score =  135 bits (68), Expect = 2e-28
 Identities = 95/104 (91%)
 Strand = Plus / Minus

                                                                          
Query: 107    ccttgagggcattgcgtgttctgaaatgtgcttgtgtgatactctctgaagacacaaggc 166
              |||| |||||| ||||||| || |||||||||  ||||||||| ||||||||||||||||
Sbjct: 177847 ccttcagggcactgcgtgtcctaaaatgtgctaatgtgatactatctgaagacacaaggc 177788

                                                          
Query: 167    attctggaaagttacttcagcattacaacatcaagacacctctt 210
              |||| |||||| ||||||||||||||||||||||||||||||||
Sbjct: 177787 attcaggaaagctacttcagcattacaacatcaagacacctctt 177744



 Score =  133 bits (67), Expect = 7e-28
 Identities = 112/127 (88%)
 Strand = Plus / Minus

                                                                          
Query: 214    agcttccataagttcaatgagcgcgagagagagcccattatcttaaagaggctccatgaa 273
              ||||||||||||||||| || || ||||||||||||| |||||||| |||||| ||||||
Sbjct: 177665 agcttccataagttcaacgaacgggagagagagcccactatcttaaggaggcttcatgaa 177606

                                                                          
Query: 274    ggggaagcaattgcagtgattagtgatgctggcactccaggcatcagtgaccctggcatg 333
              || |||||| ||||| |||| ||||||||||| || ||||| || |||||||||||||||
Sbjct: 177605 ggtgaagcagttgcactgataagtgatgctgggacgccaggtattagtgaccctggcatg 177546

                     
Query: 334    gagctgg 340
              || ||||
Sbjct: 177545 gaactgg 177539



 Score =  107 bits (54), Expect = 4e-20
 Identities = 84/94 (89%)
 Strand = Plus / Minus

                                                                          
Query: 355    actgaaaaaattcctgttattcccattcctgggccttctgccgcaattgccgctctttct 414
              ||||| ||||| ||||| ||||||||||||||||| ||||| |||||||| |||||||||
Sbjct: 177277 actgagaaaatccctgtcattcccattcctgggccatctgctgcaattgctgctctttct 177218

                                                
Query: 415    gcatcgggtttgccaaccgaggaattcacatttg 448
              ||||||||||||||| |  | |||||||||||||
Sbjct: 177217 gcatcgggtttgccatcaaatgaattcacatttg 177184
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>gb|AC027660.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone BAC
              nbxb0045B21, complete sequence
          Length = 152397

 Score =  131 bits (66), Expect = 3e-27
 Identities = 114/130 (87%)
 Strand = Plus / Minus

                                                                          
Query: 211    ctcagcttccataagttcaatgagcgcgagagagagcccattatcttaaagaggctccat 270
              |||||||| |||||||| |||||||| || |||||||| | |||||||||||| || |||
Sbjct: 130448 ctcagctttcataagtttaatgagcgtgaaagagagcctaatatcttaaagagacttcat 130389

                                                                          
Query: 271    gaaggggaagcaattgcagtgattagtgatgctggcactccaggcatcagtgaccctggc 330
              |||||||||||| ||||| |||||||||||||||| ||||| || || ||||| ||||||
Sbjct: 130388 gaaggggaagcagttgcattgattagtgatgctggtactcctggaattagtgatcctggc 130329

                        
Query: 331    atggagctgg 340
              ||||| ||||
Sbjct: 130328 atggaactgg 130319



 Score =  125 bits (63), Expect = 2e-25
 Identities = 123/143 (86%)
 Strand = Plus / Minus

                                                                          
Query: 448    gtgggttttttaccaaagcatggtcgatcaagaaaagctaggcttgaggtatctgctcgt 507
              ||||| |||||||||||||||| ||||||||||||||  ||||||||  |||||||  ||
Sbjct: 129852 gtggggtttttaccaaagcatgctcgatcaagaaaagaaaggcttgaaatatctgcctgt 129793

                                                                          
Query: 508    gaggctgtgacacaaatattctatgttcctcctcatggaattcaacagtttcttgttgat 567
               | ||||  |||||||| |||||||||||||| ||||||||||| || ||||||  ||||
Sbjct: 129792 caagctgccacacaaattttctatgttcctccccatggaattcaccaatttctttctgat 129733

                                     
Query: 568    gctgcttcgtcttttggtgattc 590
              |||||||| || |||||||||||
Sbjct: 129732 gctgcttcatcatttggtgattc 129710



 Score =  109 bits (55), Expect = 1e-20
 Identities = 88/99 (88%)
 Strand = Plus / Minus

                                                                          
Query: 112    agggcattgcgtgttctgaaatgtgcttgtgtgatactctctgaagacacaaggcattct 171
              |||||||||||| | || |||||||||  ||| ||||| || ||||||||||||||||||
Sbjct: 130659 agggcattgcgtatcctcaaatgtgctgatgtcatactatcagaagacacaaggcattct 130600

                                                     
Query: 172    ggaaagttacttcagcattacaacatcaagacacctctt 210
              |||||| ||||||| ||||| ||||||||||||||||||
Sbjct: 130599 ggaaagctacttcaacattataacatcaagacacctctt 130561



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 73/82 (89%)
 Strand = Plus / Minus

                                                                          
Query: 367    cctgttattcccattcctgggccttctgccgcaattgccgctctttctgcatcgggtttg 426
              |||||||| |||||||||||||| ||||| ||||| || |||||||||||||| ||||||
Sbjct: 130012 cctgttatccccattcctgggccgtctgctgcaatagctgctctttctgcatctggtttg 129953

                                    
Query: 427    ccaaccgaggaattcacatttg 448
              ||||| || ||||| |||||||
Sbjct: 129952 ccaactgatgaatttacatttg 129931



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                            
Query: 65     tgtatctagtggcgacacccattgggaacctcgaggatatcacctt 110
              ||||||| ||||| || || || |||||||||||||||||||||||
Sbjct: 131313 tgtatcttgtggcaacgccaatcgggaacctcgaggatatcacctt 131268
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  131 bits (66), Expect = 3e-27
 Identities = 114/130 (87%)
 Strand = Plus / Minus

                                                                            
Query: 211      ctcagcttccataagttcaatgagcgcgagagagagcccattatcttaaagaggctccat 270
                |||||||| |||||||| |||||||| || |||||||| | |||||||||||| || |||
Sbjct: 13961822 ctcagctttcataagtttaatgagcgtgaaagagagcctaatatcttaaagagacttcat 13961763

                                                                            
Query: 271      gaaggggaagcaattgcagtgattagtgatgctggcactccaggcatcagtgaccctggc 330
                |||||||||||| ||||| |||||||||||||||| ||||| || || ||||| ||||||
Sbjct: 13961762 gaaggggaagcagttgcattgattagtgatgctggtactcctggaattagtgatcctggc 13961703

                          
Query: 331      atggagctgg 340
                ||||| ||||
Sbjct: 13961702 atggaactgg 13961693



 Score =  125 bits (63), Expect = 2e-25
 Identities = 123/143 (86%)
 Strand = Plus / Minus

                                                                            
Query: 448      gtgggttttttaccaaagcatggtcgatcaagaaaagctaggcttgaggtatctgctcgt 507
                ||||| |||||||||||||||| ||||||||||||||  ||||||||  |||||||  ||
Sbjct: 13961226 gtggggtttttaccaaagcatgctcgatcaagaaaagaaaggcttgaaatatctgcctgt 13961167

                                                                            
Query: 508      gaggctgtgacacaaatattctatgttcctcctcatggaattcaacagtttcttgttgat 567
                 | ||||  |||||||| |||||||||||||| ||||||||||| || ||||||  ||||
Sbjct: 13961166 caagctgccacacaaattttctatgttcctccccatggaattcaccaatttctttctgat 13961107

                                       
Query: 568      gctgcttcgtcttttggtgattc 590
                |||||||| || |||||||||||
Sbjct: 13961106 gctgcttcatcatttggtgattc 13961084



 Score =  109 bits (55), Expect = 1e-20
 Identities = 88/99 (88%)
 Strand = Plus / Minus

                                                                            
Query: 112      agggcattgcgtgttctgaaatgtgcttgtgtgatactctctgaagacacaaggcattct 171
                |||||||||||| | || |||||||||  ||| ||||| || ||||||||||||||||||
Sbjct: 13962033 agggcattgcgtatcctcaaatgtgctgatgtcatactatcagaagacacaaggcattct 13961974

                                                       
Query: 172      ggaaagttacttcagcattacaacatcaagacacctctt 210
                |||||| ||||||| ||||| ||||||||||||||||||
Sbjct: 13961973 ggaaagctacttcaacattataacatcaagacacctctt 13961935



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 73/82 (89%)
 Strand = Plus / Minus

                                                                            
Query: 367      cctgttattcccattcctgggccttctgccgcaattgccgctctttctgcatcgggtttg 426
                |||||||| |||||||||||||| ||||| ||||| || |||||||||||||| ||||||
Sbjct: 13961386 cctgttatccccattcctgggccgtctgctgcaatagctgctctttctgcatctggtttg 13961327

                                      
Query: 427      ccaaccgaggaattcacatttg 448
                ||||| || ||||| |||||||
Sbjct: 13961326 ccaactgatgaatttacatttg 13961305



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                              
Query: 65       tgtatctagtggcgacacccattgggaacctcgaggatatcacctt 110
                ||||||| ||||| || || || |||||||||||||||||||||||
Sbjct: 13962687 tgtatcttgtggcaacgccaatcgggaacctcgaggatatcacctt 13962642
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  131 bits (66), Expect = 3e-27
 Identities = 114/130 (87%)
 Strand = Plus / Minus

                                                                            
Query: 211      ctcagcttccataagttcaatgagcgcgagagagagcccattatcttaaagaggctccat 270
                |||||||| |||||||| |||||||| || |||||||| | |||||||||||| || |||
Sbjct: 13969164 ctcagctttcataagtttaatgagcgtgaaagagagcctaatatcttaaagagacttcat 13969105

                                                                            
Query: 271      gaaggggaagcaattgcagtgattagtgatgctggcactccaggcatcagtgaccctggc 330
                |||||||||||| ||||| |||||||||||||||| ||||| || || ||||| ||||||
Sbjct: 13969104 gaaggggaagcagttgcattgattagtgatgctggtactcctggaattagtgatcctggc 13969045

                          
Query: 331      atggagctgg 340
                ||||| ||||
Sbjct: 13969044 atggaactgg 13969035



 Score =  125 bits (63), Expect = 2e-25
 Identities = 123/143 (86%)
 Strand = Plus / Minus

                                                                            
Query: 448      gtgggttttttaccaaagcatggtcgatcaagaaaagctaggcttgaggtatctgctcgt 507
                ||||| |||||||||||||||| ||||||||||||||  ||||||||  |||||||  ||
Sbjct: 13968568 gtggggtttttaccaaagcatgctcgatcaagaaaagaaaggcttgaaatatctgcctgt 13968509

                                                                            
Query: 508      gaggctgtgacacaaatattctatgttcctcctcatggaattcaacagtttcttgttgat 567
                 | ||||  |||||||| |||||||||||||| ||||||||||| || ||||||  ||||
Sbjct: 13968508 caagctgccacacaaattttctatgttcctccccatggaattcaccaatttctttctgat 13968449

                                       
Query: 568      gctgcttcgtcttttggtgattc 590
                |||||||| || |||||||||||
Sbjct: 13968448 gctgcttcatcatttggtgattc 13968426



 Score =  109 bits (55), Expect = 1e-20
 Identities = 88/99 (88%)
 Strand = Plus / Minus

                                                                            
Query: 112      agggcattgcgtgttctgaaatgtgcttgtgtgatactctctgaagacacaaggcattct 171
                |||||||||||| | || |||||||||  ||| ||||| || ||||||||||||||||||
Sbjct: 13969375 agggcattgcgtatcctcaaatgtgctgatgtcatactatcagaagacacaaggcattct 13969316

                                                       
Query: 172      ggaaagttacttcagcattacaacatcaagacacctctt 210
                |||||| ||||||| ||||| ||||||||||||||||||
Sbjct: 13969315 ggaaagctacttcaacattataacatcaagacacctctt 13969277



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 73/82 (89%)
 Strand = Plus / Minus

                                                                            
Query: 367      cctgttattcccattcctgggccttctgccgcaattgccgctctttctgcatcgggtttg 426
                |||||||| |||||||||||||| ||||| ||||| || |||||||||||||| ||||||
Sbjct: 13968728 cctgttatccccattcctgggccgtctgctgcaatagctgctctttctgcatctggtttg 13968669

                                      
Query: 427      ccaaccgaggaattcacatttg 448
                ||||| || ||||| |||||||
Sbjct: 13968668 ccaactgatgaatttacatttg 13968647



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                              
Query: 65       tgtatctagtggcgacacccattgggaacctcgaggatatcacctt 110
                ||||||| ||||| || || || |||||||||||||||||||||||
Sbjct: 13970029 tgtatcttgtggcaacgccaatcgggaacctcgaggatatcacctt 13969984
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>gb|BC099942.1| Mus musculus solute carrier family 9 (sodium/hydrogen exchanger),
            isoform 9, mRNA (cDNA clone MGC:107413 IMAGE:30103308),
            complete cds
          Length = 3539

 Score = 48.1 bits (24), Expect = 0.033
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                        
Query: 474  atcaagaaaagctaggcttgaggtatct 501
            ||||||| ||||||||||||||||||||
Sbjct: 3132 atcaagagaagctaggcttgaggtatct 3105
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>dbj|AK156494.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched
            library, clone:F830027D23 product:solute carrier family 9
            (sodium/hydrogen exchanger), isoform 9, full insert
            sequence
          Length = 3447

 Score = 48.1 bits (24), Expect = 0.033
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                        
Query: 474  atcaagaaaagctaggcttgaggtatct 501
            ||||||| ||||||||||||||||||||
Sbjct: 3122 atcaagagaagctaggcttgaggtatct 3095
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>gb|AC157517.2| Mus musculus BAC clone RP24-69C11 from chromosome 9, complete sequence
          Length = 189253

 Score = 48.1 bits (24), Expect = 0.033
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                         
Query: 474   atcaagaaaagctaggcttgaggtatct 501
             ||||||| ||||||||||||||||||||
Sbjct: 59279 atcaagagaagctaggcttgaggtatct 59306
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>ref|NM_177909.3| Mus musculus solute carrier family 9 (sodium/hydrogen exchanger),
            isoform 9 (Slc9a9), mRNA
          Length = 3539

 Score = 48.1 bits (24), Expect = 0.033
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                        
Query: 474  atcaagaaaagctaggcttgaggtatct 501
            ||||||| ||||||||||||||||||||
Sbjct: 3132 atcaagagaagctaggcttgaggtatct 3105
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>ref|NM_103586.3| Arabidopsis thaliana methyltransferase AT1G45110 mRNA, complete cds
          Length = 1316

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                 
Query: 141 tgtgatactctctgaagacacaaggcattctggaaagttacttcagcattacaa 194
           ||||||||||||||| || ||||| || ||||| ||||| || ||| |||||||
Sbjct: 284 tgtgatactctctgaggatacaagacactctgggaagttgctacagtattacaa 337
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>gb|BT010558.1| Arabidopsis thaliana At1g45110 gene, complete cds
          Length = 1032

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                 
Query: 141 tgtgatactctctgaagacacaaggcattctggaaagttacttcagcattacaa 194
           ||||||||||||||| || ||||| || ||||| ||||| || ||| |||||||
Sbjct: 246 tgtgatactctctgaggatacaagacactctgggaagttgctacagtattacaa 299
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>emb|BX814552.1|CNS0AC8P Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB7ZG01 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1283

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                 
Query: 141 tgtgatactctctgaagacacaaggcattctggaaagttacttcagcattacaa 194
           ||||||||||||||| || ||||| || ||||| ||||| || ||| |||||||
Sbjct: 251 tgtgatactctctgaggatacaagacactctgggaagttgctacagtattacaa 304
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>gb|AC007915.3|AC007915 Genomic sequence for Arabidopsis thaliana BAC F27F5 from chromosome I,
             complete sequence
          Length = 137336

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                   
Query: 141   tgtgatactctctgaagacacaaggcattctggaaagttacttcagcattacaa 194
             ||||||||||||||| || ||||| || ||||| ||||| || ||| |||||||
Sbjct: 78928 tgtgatactctctgaggatacaagacactctgggaagttgctacagtattacaa 78981
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>gb|AY692264.1| Bacteriophage T5 strain st0 deletion mutant, complete genome
          Length = 113238

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 279    agcaattgcagtgattagtg 298
              ||||||||||||||||||||
Sbjct: 102743 agcaattgcagtgattagtg 102724
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>gb|AY543070.1| Bacteriophage T5, complete genome
          Length = 121750

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 279    agcaattgcagtgattagtg 298
              ||||||||||||||||||||
Sbjct: 110785 agcaattgcagtgattagtg 110766
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>gb|AC185539.1| Drosophila melanogaster clone BACR22O16, complete sequence
          Length = 180099

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 380    ttcctgggccttctgccgca 399
              ||||||||||||||||||||
Sbjct: 118150 ttcctgggccttctgccgca 118169
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>gb|AC185536.1| Drosophila melanogaster clone BACR38K14, complete sequence
          Length = 185823

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 380   ttcctgggccttctgccgca 399
             ||||||||||||||||||||
Sbjct: 41906 ttcctgggccttctgccgca 41925
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>gb|AC122923.4| Mus musculus BAC clone RP23-36G5 from 10, complete sequence
          Length = 242112

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 202    acacctcttctcagcttcca 221
              ||||||||||||||||||||
Sbjct: 217606 acacctcttctcagcttcca 217625
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>emb|AL591435.10| Human DNA sequence from clone RP11-712I22 on chromosome X, complete
             sequence
          Length = 138038

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 464   agcatggtcgatcaagaaaa 483
             ||||||||||||||||||||
Sbjct: 60654 agcatggtcgatcaagaaaa 60673
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>emb|AL445649.15| Human DNA sequence from clone RP11-381O6 on chromosome 13, complete
              sequence
          Length = 190126

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 209    ttctcagcttccataagttc 228
              ||||||||||||||||||||
Sbjct: 154058 ttctcagcttccataagttc 154039
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>emb|CR380959.1| Candida glabrata strain CBS138 chromosome M complete sequence
          Length = 1400893

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 522    aatattctatgttcctcctc 541
              ||||||||||||||||||||
Sbjct: 441503 aatattctatgttcctcctc 441522
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>ref|NM_167760.1| Drosophila melanogaster CG14476-RE, transcript variant E (CG14476),
           mRNA
          Length = 3264

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 380 ttcctgggccttctgccgca 399
           ||||||||||||||||||||
Sbjct: 765 ttcctgggccttctgccgca 746
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>ref|NM_167759.1| Drosophila melanogaster CG14476-RD, transcript variant D (CG14476),
           mRNA
          Length = 3138

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 380 ttcctgggccttctgccgca 399
           ||||||||||||||||||||
Sbjct: 639 ttcctgggccttctgccgca 620
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>ref|NM_167758.1| Drosophila melanogaster CG14476-RC, transcript variant C (CG14476),
           mRNA
          Length = 3089

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 380 ttcctgggccttctgccgca 399
           ||||||||||||||||||||
Sbjct: 590 ttcctgggccttctgccgca 571
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>ref|NM_167757.1| Drosophila melanogaster CG14476-RA, transcript variant A (CG14476),
           mRNA
          Length = 3144

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 380 ttcctgggccttctgccgca 399
           ||||||||||||||||||||
Sbjct: 647 ttcctgggccttctgccgca 628
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>ref|NM_143888.4| Drosophila melanogaster CG14476-RB, transcript variant B (CG14476),
           mRNA
          Length = 3135

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 380 ttcctgggccttctgccgca 399
           ||||||||||||||||||||
Sbjct: 636 ttcctgggccttctgccgca 617
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 376     cccattcctgggccttctgc 395
               ||||||||||||||||||||
Sbjct: 2734199 cccattcctgggccttctgc 2734218
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>gb|AY954234.1| Ranunculus lapponicus voucher J.T. Johansson s.n. trnK gene,
           intron; and maturase K (matK) gene, complete cds;
           chloroplast
          Length = 1817

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 468 tggtcgatcaagaaaagcta 487
           ||||||||||||||||||||
Sbjct: 769 tggtcgatcaagaaaagcta 750
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>emb|BX004973.10| Mouse DNA sequence from clone RP24-260G16 on chromosome 2, complete
             sequence
          Length = 114815

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 311   caggcatcagtgaccctggcatggagct 338
             |||||||| ||||||| |||||||||||
Sbjct: 67875 caggcatctgtgacccaggcatggagct 67902
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>emb|AL845260.15| Mouse DNA sequence from clone RP23-232J15 on chromosome 2, complete
              sequence
          Length = 217328

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 148    ctctctgaagacacaaggca 167
              ||||||||||||||||||||
Sbjct: 156425 ctctctgaagacacaaggca 156406
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>gb|AF105037.1|AF105037 Murid herpesvirus 4 complete genome
          Length = 119550

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 551   aacagtttcttgttgatgct 570
             ||||||||||||||||||||
Sbjct: 54608 aacagtttcttgttgatgct 54589
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>gb|AY587007.1| Bacteriophage T5 strain ATCC 11303-B5, complete genome
          Length = 121752

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 279    agcaattgcagtgattagtg 298
              ||||||||||||||||||||
Sbjct: 110867 agcaattgcagtgattagtg 110848
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>gb|AF145625.1|AF145625 Drosophila melanogaster clone GH04962 BcDNA.GH04962 (BcDNA.GH04962)
           mRNA, complete cds
          Length = 3174

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 380 ttcctgggccttctgccgca 399
           ||||||||||||||||||||
Sbjct: 655 ttcctgggccttctgccgca 636
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>gb|AE003122.5| Drosophila melanogaster chromosome X, section 72 of 74 of the complete
             sequence
          Length = 306367

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 380   ttcctgggccttctgccgca 399
             ||||||||||||||||||||
Sbjct: 82355 ttcctgggccttctgccgca 82374
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>emb|AL356032.4|CNS05TDD Human chromosome 14 DNA sequence BAC R-802A16 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 169936

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 225    gttcaatgagcgcgagagag 244
              ||||||||||||||||||||
Sbjct: 169748 gttcaatgagcgcgagagag 169729
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>emb|X75922.1|BT5LLP Bacteriophage T5 llp, oad, dmp genes
          Length = 1622

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 279 agcaattgcagtgattagtg 298
           ||||||||||||||||||||
Sbjct: 498 agcaattgcagtgattagtg 479
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>gb|AC132435.3| Mus musculus BAC clone RP23-223L12 from 10, complete sequence
          Length = 198383

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 202   acacctcttctcagcttcca 221
             ||||||||||||||||||||
Sbjct: 38216 acacctcttctcagcttcca 38235
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>gb|U97553.1|U97553 Murine herpesvirus 68 strain WUMS, complete genome
          Length = 119450

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 551   aacagtttcttgttgatgct 570
             ||||||||||||||||||||
Sbjct: 54607 aacagtttcttgttgatgct 54588
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>emb|AL355887.4|CNS05TCY Human chromosome 14 DNA sequence BAC R-179O11 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 159183

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 225   gttcaatgagcgcgagagag 244
             ||||||||||||||||||||
Sbjct: 74725 gttcaatgagcgcgagagag 74706
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>emb|AL808017.4| Mouse DNA sequence from clone RP23-145G21 on chromosome X, complete
             sequence
          Length = 183291

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 367   cctgttattcccattcctgg 386
             ||||||||||||||||||||
Sbjct: 32251 cctgttattcccattcctgg 32232


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,888,045
Number of Sequences: 3902068
Number of extensions: 4888045
Number of successful extensions: 98364
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 98221
Number of HSP's gapped (non-prelim): 143
length of query: 593
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 570
effective length of database: 17,143,297,704
effective search space: 9771679691280
effective search space used: 9771679691280
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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