| Clone Name | rbaal9i14 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC087518.5| Homo sapiens chromosome , clone RP11-359E19, complete sequence Length = 168531 Score = 42.1 bits (21), Expect = 0.91 Identities = 24/25 (96%) Strand = Plus / Minus Query: 85 atttattatttcaaggtccaattat 109 |||||||||||||||||| |||||| Sbjct: 159929 atttattatttcaaggtcgaattat 159905
>gb|AC022733.8| Homo sapiens chromosome 8, clone RP11-470M17, complete sequence Length = 175202 Score = 42.1 bits (21), Expect = 0.91 Identities = 24/25 (96%) Strand = Plus / Plus Query: 85 atttattatttcaaggtccaattat 109 |||||||||||||||||| |||||| Sbjct: 98023 atttattatttcaaggtcgaattat 98047
>ref|XM_759973.1| Theileria parva strain Muguga phosphate transporter (TP02_0500) partial mRNA Length = 2241 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 251 ctcctcgtcgatgccgtcat 270 |||||||||||||||||||| Sbjct: 1587 ctcctcgtcgatgccgtcat 1568
>emb|CR522870.1| Desulfotalea psychrophila LSv54 chromosome Length = 3523383 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 gcaagataagatcatctttc 231 |||||||||||||||||||| Sbjct: 190135 gcaagataagatcatctttc 190116
>gb|AC010853.11| Homo sapiens chromosome 18, clone RP11-349D12, complete sequence Length = 184396 Score = 40.1 bits (20), Expect = 3.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 41 ccattactcggtgtaatatgctgaggaa 68 |||||||| |||||||||||| |||||| Sbjct: 160443 ccattactgggtgtaatatgcagaggaa 160416
>gb|AC091154.3| Homo sapiens chromosome 17, clone RP11-750B16, complete sequence Length = 175783 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 aagtacagaagaagatgcca 43 |||||||||||||||||||| Sbjct: 153439 aagtacagaagaagatgcca 153420
>gb|AC015974.10| Homo sapiens BAC clone RP11-467A18 from 2, complete sequence Length = 196544 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 agtacagaagaagatgccat 44 |||||||||||||||||||| Sbjct: 195850 agtacagaagaagatgccat 195869
>gb|AC067961.8| Homo sapiens BAC clone RP11-59F3 from 2, complete sequence Length = 105884 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 agtacagaagaagatgccat 44 |||||||||||||||||||| Sbjct: 1306 agtacagaagaagatgccat 1325
>dbj|BS000062.1| Pan troglodytes chromosome 22 clone:PTB-045C17, map 22, complete sequences Length = 171187 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 51 gtgtaatatgctgaggaactacat 74 |||||| ||||||||||||||||| Sbjct: 50284 gtgtaagatgctgaggaactacat 50307
>dbj|AP001679.1| Homo sapiens genomic DNA, chromosome 21q, section 23/105 Length = 340000 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 51 gtgtaatatgctgaggaactacat 74 |||||| ||||||||||||||||| Sbjct: 125058 gtgtaagatgctgaggaactacat 125081
>gb|AC118620.10| Mus musculus chromosome 3, clone RP24-571H24, complete sequence Length = 182926 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 ctgtggttttgctttggctg 151 |||||||||||||||||||| Sbjct: 31641 ctgtggttttgctttggctg 31660
>gb|AC004606.1|AC004606 Homo sapiens chromosome 17, clone hRPC.1043_H_15, complete sequence Length = 99512 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 aagtacagaagaagatgcca 43 |||||||||||||||||||| Sbjct: 80675 aagtacagaagaagatgcca 80694
>dbj|AP001251.1| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2, clone:B5P9, LL56-APP region, complete sequence Length = 150681 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 51 gtgtaatatgctgaggaactacat 74 |||||| ||||||||||||||||| Sbjct: 113281 gtgtaagatgctgaggaactacat 113304 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,639,114 Number of Sequences: 3902068 Number of extensions: 2639114 Number of successful extensions: 51913 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 13 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 51884 Number of HSP's gapped (non-prelim): 29 length of query: 276 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 254 effective length of database: 17,147,199,772 effective search space: 4355388742088 effective search space used: 4355388742088 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)