| Clone Name | bags13c06 |
|---|---|
| Clone Library Name | barley_pub |
>gb|U33283.1|OSU33283 Oryza sativa Ca2+ sensitive 3'(2'),5-diphosphonucleoside 3'(2') phosphohydrolase mRNA, complete cds Length = 1480 Score = 456 bits (230), Expect = e-125 Identities = 512/606 (84%) Strand = Plus / Plus Query: 1 tgatggtactaaaggtttcttgagaggaggccaatatgcaatcgcactggcactgcttga 60 |||||| |||||||||||||| || |||| ||||||||| || || ||||| |||||||| Sbjct: 585 tgatgggactaaaggtttcttaaggggagaccaatatgctattgccctggctctgcttga 644 Query: 61 tgagggcaaagttgttttgggcgtgttgggatgtccaaatcttcctttgacattaataag 120 |||||| |||||||||||||| || |||| ||||| || ||| ||||| || |||| | Sbjct: 645 tgagggtaaagttgttttgggtgtattggcttgtcccaacctttctttgggatcaatagg 704 Query: 121 caaccttgatggtagctcatcaggagatcaaaccggggccctcttttcggctacaattgg 180 ||||||| ||||| |||| || ||||||||| || || |||||||| ||||| ||||| Sbjct: 705 caaccttaatggtggctcctcgggagatcaagttggtgctctcttttctgctactattgg 764 Query: 181 ttgtggtgctgaagtagagtcattagagggctctccgccacaaaagattagtgtttgtac 240 |||||| |||||||||||||| ||| |||||||||| ||||||| |||||| | || | Sbjct: 765 ttgtggagctgaagtagagtctttacagggctctccagcacaaaacattagtctctgctc 824 Query: 241 catcgacaatccagtgaatgcctcgttctttgaatcttatgaaggagcacacacgatgca 300 ||||||||||||||| | || || |||||||| || || ||||| |||||| | ||| Sbjct: 825 catcgacaatccagtcgaagcttcattctttgagtcctacgaaggggcacactccttgcg 884 Query: 301 tgatttaactggctcgatagcggagaaacttggtgtccaagctcctccagtcagaataga 360 ||||||||| ||||| || |||||||||||||||||||||||||||||||| ||||| || Sbjct: 885 tgatttaacaggctccattgcggagaaacttggtgtccaagctcctccagttagaattga 944 Query: 361 tagccaagcaaaatatggtgctctggcccgtggcgatggtgccatttacttgcgttttcc 420 ||||||||||||||| ||||| || ||||| || || ||||||||||||||||||||||| Sbjct: 945 tagccaagcaaaatacggtgccctagcccgaggtgacggtgccatttacttgcgttttcc 1004 Query: 421 acacaagggttataaggaaaagatatgggatcatgcagctggtgcaattgtcgtcacaga 480 |||||| ||||| | || ||||| ||||||||||||||||| |||| ||||| ||||| Sbjct: 1005 acacaaaggttacagagagaagatctgggatcatgcagctgggtcaatcgtcgtgacaga 1064 Query: 481 atctggaggtgtagtaacagatgcctcaggaaacgatcttgatttctcgaaagggcgatt 540 | |||||||| | || |||||||| |||||||||||| | |||||||| |||||| |||| Sbjct: 1065 agctggaggtctggtgacagatgcatcaggaaacgatttggatttctccaaagggagatt 1124 Query: 541 tcttgatgttgacacaggcatcattgccacaaataagcagttgatgccatcactcctgaa 600 ||||||| | |||||||| ||||| || || || |||||| ||||||| ||||||||||| Sbjct: 1125 tcttgatctcgacacagggatcatcgcgacgaacaagcagctgatgccttcactcctgaa 1184 Query: 601 gtctgt 606 | |||| Sbjct: 1185 ggctgt 1190
>gb|AF288075.1|AF288075 Zea mays diphosphonucleotide phosphatase 1 mRNA, complete cds Length = 1453 Score = 454 bits (229), Expect = e-124 Identities = 511/605 (84%) Strand = Plus / Plus Query: 5 ggtactaaaggtttcttgagaggaggccaatatgcaatcgcactggcactgcttgatgag 64 |||||||||||||||||||| || | ||||||||| || ||| |||| ||||||||||| Sbjct: 527 ggtactaaaggtttcttgaggggcgaccaatatgccattgcattggctctgcttgatgaa 586 Query: 65 ggcaaagttgttttgggcgtgttgggatgtccaaatcttcctttgacattaataagcaac 124 || |||||||||||||| || |||| |||||||||||||| ||| ||| ||||| |||| Sbjct: 587 ggtaaagttgttttgggtgtattggcttgtccaaatcttccattgtcatcaataaacaac 646 Query: 125 cttgatggtagctcatcaggagatcaaaccggggccctcttttcggctacaattggttgt 184 | |||||| ||| || |||||| || || ||||| ||||| ||||||||||||||| Sbjct: 647 atcaatggtaactcttcgggagataaagttggtgccctgttttctgctacaattggttgt 706 Query: 185 ggtgctgaagtagagtcattagagggctctccgccacaaaagattagtgtttgtaccatc 244 || ||| |||||||||| ||||| |||||||| |||||||||||||||||||| ||||| Sbjct: 707 ggggctcaagtagagtccttagatggctctccaccacaaaagattagtgtttgctccatc 766 Query: 245 gacaatccagtgaatgcctcgttctttgaatcttatgaaggagcacacacgatgcatgat 304 |||||||| || ||||| || || |||||||| |||||| | |||||| | ||||||||| Sbjct: 767 gacaatcctgtcaatgcatcattttttgaatcctatgaaagtgcacactccatgcatgat 826 Query: 305 ttaactggctcgatagcggagaaacttggtgtccaagctcctccagtcagaatagatagc 364 || ||| |||| || || ||||||||||||||||||||||||||||| ||||| || ||| Sbjct: 827 ttgactcgctctattgcagagaaacttggtgtccaagctcctccagttagaatcgacagc 886 Query: 365 caagcaaaatatggtgctctggcccgtggcgatggtgccatttacttgcgttttccacac 424 |||||||||||||||||||||||||| || ||||| |||||||||||||| ||||||||| Sbjct: 887 caagcaaaatatggtgctctggcccgaggtgatggcgccatttacttgcgctttccacac 946 Query: 425 aagggttataaggaaaagatatgggatcatgcagctggtgcaattgtcgtcacagaatct 484 || ||||||| || || |||||||| ||||||| || |||||||||| |||||| || Sbjct: 947 aaaggttatagagagaaaatatgggaccatgcaggaggatcaattgtcgtgacagaagct 1006 Query: 485 ggaggtgtagtaacagatgcctcaggaaacgatcttgatttctcgaaagggcgatttctt 544 ||||| ||||||||||||| | ||||| || | |||||||| |||||| ||||||| Sbjct: 1007 ggaggcatagtaacagatgctgcgggaaaggacttggatttctccaaagggagatttctg 1066 Query: 545 gatgttgacacaggcatcattgccacaaataagcagttgatgccatcactcctgaagtct 604 ||| | |||||||||||||| || || || ||| |||||||||| || |||||||| || Sbjct: 1067 gatctcgacacaggcatcatcgcaaccaacaaggagttgatgccgtcgctcctgaaagct 1126 Query: 605 gtcca 609 ||||| Sbjct: 1127 gtcca 1131
>dbj|AK058937.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-009-F07, full insert sequence Length = 848 Score = 442 bits (223), Expect = e-121 Identities = 475/559 (84%) Strand = Plus / Plus Query: 48 tggcactgcttgatgagggcaaagttgttttgggcgtgttgggatgtccaaatcttcctt 107 |||| |||||||||||||| |||||||||||||| || |||| ||||| || ||| ||| Sbjct: 1 tggctctgcttgatgagggtaaagttgttttgggtgtattggcttgtcccaacctttctt 60 Query: 108 tgacattaataagcaaccttgatggtagctcatcaggagatcaaaccggggccctctttt 167 || || |||| |||||||| ||||| |||| || ||||||||| || || ||||||| Sbjct: 61 tgggatcaataggcaaccttaatggtggctcctcgggagatcaagttggtgctctctttt 120 Query: 168 cggctacaattggttgtggtgctgaagtagagtcattagagggctctccgccacaaaaga 227 | ||||| ||||||||||| |||||||||||||| ||| |||||||||| ||||||||| Sbjct: 121 ctgctactattggttgtggagctgaagtagagtctttacagggctctccagcacaaaaga 180 Query: 228 ttagtgtttgtaccatcgacaatccagtgaatgcctcgttctttgaatcttatgaaggag 287 ||||||| ||| |||||||||||||||| | || || |||||||| || || ||||| | Sbjct: 181 ttagtgtctgttccatcgacaatccagtcgaagcttcattctttgagtcctacgaagggg 240 Query: 288 cacacacgatgcatgatttaactggctcgatagcggagaaacttggtgtccaagctcctc 347 ||||| | ||| ||||||||| ||||| || |||||||||||||||||||||||||||| Sbjct: 241 cacactccttgcgtgatttaacaggctccattgcggagaaacttggtgtccaagctcctc 300 Query: 348 cagtcagaatagatagccaagcaaaatatggtgctctggcccgtggcgatggtgccattt 407 |||| ||||| ||||||||||||||||| ||||| || ||||| || || |||||||||| Sbjct: 301 cagttagaattgatagccaagcaaaatacggtgccctagcccgaggtgacggtgccattt 360 Query: 408 acttgcgttttccacacaagggttataaggaaaagatatgggatcatgcagctggtgcaa 467 ||||||||||||||||||| ||||| | || ||||| ||||||||||||||||| ||| Sbjct: 361 acttgcgttttccacacaaaggttacagagagaagatctgggatcatgcagctgggtcaa 420 Query: 468 ttgtcgtcacagaatctggaggtgtagtaacagatgcctcaggaaacgatcttgatttct 527 | ||||| |||||| |||||||| | || |||||||| |||||||||||| | ||||||| Sbjct: 421 tcgtcgtgacagaagctggaggtctggtgacagatgcatcaggaaacgatttggatttct 480 Query: 528 cgaaagggcgatttcttgatgttgacacaggcatcattgccacaaataagcagttgatgc 587 | |||||| ||||||||||| | |||||||| ||||| || || || |||||| |||||| Sbjct: 481 ccaaagggagatttcttgatctcgacacagggatcatcgcgacgaacaagcagctgatgc 540 Query: 588 catcactcctgaagtctgt 606 | |||||||||||| |||| Sbjct: 541 cttcactcctgaaggctgt 559
>gb|AY111987.1| Zea mays CL10219_1 mRNA sequence Length = 771 Score = 276 bits (139), Expect = 8e-71 Identities = 277/323 (85%) Strand = Plus / Minus Query: 287 gcacacacgatgcatgatttaactggctcgatagcggagaaacttggtgtccaagctcct 346 |||||| | ||||||||||| |||||||| || || |||||||||||||||||||||||| Sbjct: 717 gcacactccatgcatgatttgactggctctattgcagagaaacttggtgtccaagctcct 658 Query: 347 ccagtcagaatagatagccaagcaaaatatggtgctctggcccgtggcgatggtgccatt 406 ||||| ||||| || ||||||||||||||||||||||||||||| || ||||| |||||| Sbjct: 657 ccagttagaatcgacagccaagcaaaatatggtgctctggcccgaggtgatggcgccatt 598 Query: 407 tacttgcgttttccacacaagggttataaggaaaagatatgggatcatgcagctggtgca 466 |||||||| ||||||||||| ||||||| || || |||||||| |||||||| || || Sbjct: 597 tacttgcgctttccacacaaaggttatagagagaaaatatgggaccatgcagcaggatca 538 Query: 467 attgtcgtcacagaatctggaggtgtagtaacagatgcctcaggaaacgatcttgatttc 526 |||||||| |||||| ||||||| ||||||||||||| | |||||||| | |||||| Sbjct: 537 attgtcgtgacagaagctggaggcatagtaacagatgctgcgggaaacgacttggatttc 478 Query: 527 tcgaaagggcgatttcttgatgttgacacaggcatcattgccacaaataagcagttgatg 586 || |||||| ||||||| ||| | |||||||||||||| || || || ||| |||||||| Sbjct: 477 tccaaagggagatttctcgatctcgacacaggcatcatcgcaaccaacaaggagttgatg 418 Query: 587 ccatcactcctgaagtctgtcca 609 || || |||||||| ||||||| Sbjct: 417 ccgtcgctcctgaaagctgtcca 395
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 167 bits (84), Expect = 5e-38 Identities = 138/156 (88%) Strand = Plus / Minus Query: 324 agaaacttggtgtccaagctcctccagtcagaatagatagccaagcaaaatatggtgctc 383 |||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||| | Sbjct: 4216323 agaaacttggtgtccaagctcctccagttagaattgatagccaagcaaaatacggtgccc 4216264 Query: 384 tggcccgtggcgatggtgccatttacttgcgttttccacacaagggttataaggaaaaga 443 | ||||| || || ||||||||||||||||||||||||||||| ||||| | || |||| Sbjct: 4216263 tagcccgaggtgacggtgccatttacttgcgttttccacacaaaggttacagagagaaga 4216204 Query: 444 tatgggatcatgcagctggtgcaattgtcgtcacag 479 | ||||||||||||||||| |||| ||||| |||| Sbjct: 4216203 tctgggatcatgcagctgggtcaatcgtcgtgacag 4216168 Score = 143 bits (72), Expect = 8e-31 Identities = 177/212 (83%) Strand = Plus / Minus Query: 15 gtttcttgagaggaggccaatatgcaatcgcactggcactgcttgatgagggcaaagttg 74 ||||||| || |||| ||||||||| || || ||||| |||||||||||||| ||||||| Sbjct: 4216810 gtttcttaaggggagaccaatatgctattgccctggctctgcttgatgagggtaaagttg 4216751 Query: 75 ttttgggcgtgttgggatgtccaaatcttcctttgacattaataagcaaccttgatggta 134 ||||||| || |||| ||||| || ||| ||||| || |||| |||||||| ||||| Sbjct: 4216750 ttttgggtgtattggcttgtcccaacctttctttgggatcaataggcaaccttaatggtg 4216691 Query: 135 gctcatcaggagatcaaaccggggccctcttttcggctacaattggttgtggtgctgaag 194 |||| || ||||||||| || || |||||||| ||||| ||||||||||| ||||||| Sbjct: 4216690 gctcctcgggagatcaagttggtgctctcttttctgctactattggttgtggagctgaag 4216631 Query: 195 tagagtcattagagggctctccgccacaaaag 226 ||||||| ||| |||||||||| |||||||| Sbjct: 4216630 tagagtctttacagggctctccagcacaaaag 4216599 Score = 107 bits (54), Expect = 4e-20 Identities = 111/130 (85%) Strand = Plus / Minus Query: 477 cagaatctggaggtgtagtaacagatgcctcaggaaacgatcttgatttctcgaaagggc 536 ||||| |||||||| | || |||||||| |||||||||||| | |||||||| |||||| Sbjct: 4216008 cagaagctggaggtctggtgacagatgcatcaggaaacgatttggatttctccaaaggga 4215949 Query: 537 gatttcttgatgttgacacaggcatcattgccacaaataagcagttgatgccatcactcc 596 ||||||||||| | |||||||| ||||| || || || |||||| ||||||| ||||||| Sbjct: 4215948 gatttcttgatctcgacacagggatcatcgcgacgaacaagcagctgatgccttcactcc 4215889 Query: 597 tgaagtctgt 606 ||||| |||| Sbjct: 4215888 tgaaggctgt 4215879 Score = 101 bits (51), Expect = 3e-18 Identities = 90/103 (87%) Strand = Plus / Minus Query: 324 agaaacttggtgtccaagctcctccagtcagaatagatagccaagcaaaatatggtgctc 383 ||||||||||| | |||||||||||||| ||||| |||||||||||||||||||||||| Sbjct: 4212631 agaaacttggtattcaagctcctccagttagaattgatagccaagcaaaatatggtgctg 4212572 Query: 384 tggcccgtggcgatggtgccatttacttgcgttttccacacaa 426 | |||| || ||||| |||||||| | ||| ||||||||||| Sbjct: 4212571 tagcccaaggtgatggcgccatttattggcgatttccacacaa 4212529 Score = 60.0 bits (30), Expect = 9e-06 Identities = 93/114 (81%) Strand = Plus / Minus Query: 477 cagaatctggaggtgtagtaacagatgcctcaggaaacgatcttgatttctcgaaagggc 536 ||||| |||||||| | |||| |||||| |||||||||||| | |||||||| ||||| Sbjct: 4212372 cagaagctggaggtttggtaaaagatgcttcaggaaacgatttggatttctccaaaggta 4212313 Query: 537 gatttcttgatgttgacacaggcatcattgccacaaataagcagttgatgccat 590 ||| ||||||| ||| | ||||| ||||| |||||||| | |||||||||| Sbjct: 4212312 gatatcttgatcgtgatgctggcattattgcaacaaataaatatttgatgccat 4212259 Score = 58.0 bits (29), Expect = 4e-05 Identities = 83/101 (82%) Strand = Plus / Minus Query: 225 agattagtgtttgtaccatcgacaatccagtgaatgcctcgttctttgaatcttatgaag 284 |||||||||| ||| |||||||||||||||| | || || |||||||| || || |||| Sbjct: 4216499 agattagtgtctgttccatcgacaatccagtcgaagcttcattctttgagtcctacgaag 4216440 Query: 285 gagcacacacgatgcatgatttaactggctcgatagcggag 325 | |||||| | ||| ||||||||| ||||| || |||||| Sbjct: 4216439 gggcacactccttgcgtgatttaacaggctccattgcggag 4216399 Score = 58.0 bits (29), Expect = 4e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 158 gccctcttttcggctacaattggttgtggtgctgaagtagagtcattagagggctctccg 217 ||||||||||| ||||||||||| ||||| || ||| ||||| ||||| ||||||| | Sbjct: 4212985 gccctcttttctgctacaattggctgtggatctacagttgagtccttagaaggctctcag 4212926 Query: 218 ccacaaaag 226 ||||||||| Sbjct: 4212925 ccacaaaag 4212917 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 247 caatccagtgaatgcctcgttctttgaatcttatgaa 283 |||||||||| ||||||| |||||||||||||||||| Sbjct: 4212791 caatccagtggatgcctcattctttgaatcttatgaa 4212755
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 167 bits (84), Expect = 5e-38 Identities = 138/156 (88%) Strand = Plus / Minus Query: 324 agaaacttggtgtccaagctcctccagtcagaatagatagccaagcaaaatatggtgctc 383 |||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||| | Sbjct: 4216310 agaaacttggtgtccaagctcctccagttagaattgatagccaagcaaaatacggtgccc 4216251 Query: 384 tggcccgtggcgatggtgccatttacttgcgttttccacacaagggttataaggaaaaga 443 | ||||| || || ||||||||||||||||||||||||||||| ||||| | || |||| Sbjct: 4216250 tagcccgaggtgacggtgccatttacttgcgttttccacacaaaggttacagagagaaga 4216191 Query: 444 tatgggatcatgcagctggtgcaattgtcgtcacag 479 | ||||||||||||||||| |||| ||||| |||| Sbjct: 4216190 tctgggatcatgcagctgggtcaatcgtcgtgacag 4216155 Score = 143 bits (72), Expect = 8e-31 Identities = 177/212 (83%) Strand = Plus / Minus Query: 15 gtttcttgagaggaggccaatatgcaatcgcactggcactgcttgatgagggcaaagttg 74 ||||||| || |||| ||||||||| || || ||||| |||||||||||||| ||||||| Sbjct: 4216797 gtttcttaaggggagaccaatatgctattgccctggctctgcttgatgagggtaaagttg 4216738 Query: 75 ttttgggcgtgttgggatgtccaaatcttcctttgacattaataagcaaccttgatggta 134 ||||||| || |||| ||||| || ||| ||||| || |||| |||||||| ||||| Sbjct: 4216737 ttttgggtgtattggcttgtcccaacctttctttgggatcaataggcaaccttaatggtg 4216678 Query: 135 gctcatcaggagatcaaaccggggccctcttttcggctacaattggttgtggtgctgaag 194 |||| || ||||||||| || || |||||||| ||||| ||||||||||| ||||||| Sbjct: 4216677 gctcctcgggagatcaagttggtgctctcttttctgctactattggttgtggagctgaag 4216618 Query: 195 tagagtcattagagggctctccgccacaaaag 226 ||||||| ||| |||||||||| |||||||| Sbjct: 4216617 tagagtctttacagggctctccagcacaaaag 4216586 Score = 107 bits (54), Expect = 4e-20 Identities = 111/130 (85%) Strand = Plus / Minus Query: 477 cagaatctggaggtgtagtaacagatgcctcaggaaacgatcttgatttctcgaaagggc 536 ||||| |||||||| | || |||||||| |||||||||||| | |||||||| |||||| Sbjct: 4215995 cagaagctggaggtctggtgacagatgcatcaggaaacgatttggatttctccaaaggga 4215936 Query: 537 gatttcttgatgttgacacaggcatcattgccacaaataagcagttgatgccatcactcc 596 ||||||||||| | |||||||| ||||| || || || |||||| ||||||| ||||||| Sbjct: 4215935 gatttcttgatctcgacacagggatcatcgcgacgaacaagcagctgatgccttcactcc 4215876 Query: 597 tgaagtctgt 606 ||||| |||| Sbjct: 4215875 tgaaggctgt 4215866 Score = 101 bits (51), Expect = 3e-18 Identities = 90/103 (87%) Strand = Plus / Minus Query: 324 agaaacttggtgtccaagctcctccagtcagaatagatagccaagcaaaatatggtgctc 383 ||||||||||| | |||||||||||||| ||||| |||||||||||||||||||||||| Sbjct: 4212618 agaaacttggtattcaagctcctccagttagaattgatagccaagcaaaatatggtgctg 4212559 Query: 384 tggcccgtggcgatggtgccatttacttgcgttttccacacaa 426 | |||| || ||||| |||||||| | ||| ||||||||||| Sbjct: 4212558 tagcccaaggtgatggcgccatttattggcgatttccacacaa 4212516 Score = 60.0 bits (30), Expect = 9e-06 Identities = 93/114 (81%) Strand = Plus / Minus Query: 477 cagaatctggaggtgtagtaacagatgcctcaggaaacgatcttgatttctcgaaagggc 536 ||||| |||||||| | |||| |||||| |||||||||||| | |||||||| ||||| Sbjct: 4212359 cagaagctggaggtttggtaaaagatgcttcaggaaacgatttggatttctccaaaggta 4212300 Query: 537 gatttcttgatgttgacacaggcatcattgccacaaataagcagttgatgccat 590 ||| ||||||| ||| | ||||| ||||| |||||||| | |||||||||| Sbjct: 4212299 gatatcttgatcgtgatgctggcattattgcaacaaataaatatttgatgccat 4212246 Score = 58.0 bits (29), Expect = 4e-05 Identities = 83/101 (82%) Strand = Plus / Minus Query: 225 agattagtgtttgtaccatcgacaatccagtgaatgcctcgttctttgaatcttatgaag 284 |||||||||| ||| |||||||||||||||| | || || |||||||| || || |||| Sbjct: 4216486 agattagtgtctgttccatcgacaatccagtcgaagcttcattctttgagtcctacgaag 4216427 Query: 285 gagcacacacgatgcatgatttaactggctcgatagcggag 325 | |||||| | ||| ||||||||| ||||| || |||||| Sbjct: 4216426 gggcacactccttgcgtgatttaacaggctccattgcggag 4216386 Score = 58.0 bits (29), Expect = 4e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 158 gccctcttttcggctacaattggttgtggtgctgaagtagagtcattagagggctctccg 217 ||||||||||| ||||||||||| ||||| || ||| ||||| ||||| ||||||| | Sbjct: 4212972 gccctcttttctgctacaattggctgtggatctacagttgagtccttagaaggctctcag 4212913 Query: 218 ccacaaaag 226 ||||||||| Sbjct: 4212912 ccacaaaag 4212904 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 247 caatccagtgaatgcctcgttctttgaatcttatgaa 283 |||||||||| ||||||| |||||||||||||||||| Sbjct: 4212778 caatccagtggatgcctcattctttgaatcttatgaa 4212742
>emb|AL954158.4|CNS08CCW Oryza sativa chromosome 12, . Partial sequence from BAC OSJNBb0089D09 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 104999 Score = 167 bits (84), Expect = 5e-38 Identities = 138/156 (88%) Strand = Plus / Plus Query: 324 agaaacttggtgtccaagctcctccagtcagaatagatagccaagcaaaatatggtgctc 383 |||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||| | Sbjct: 67460 agaaacttggtgtccaagctcctccagttagaattgatagccaagcaaaatacggtgccc 67519 Query: 384 tggcccgtggcgatggtgccatttacttgcgttttccacacaagggttataaggaaaaga 443 | ||||| || || ||||||||||||||||||||||||||||| ||||| | || |||| Sbjct: 67520 tagcccgaggtgacggtgccatttacttgcgttttccacacaaaggttacagagagaaga 67579 Query: 444 tatgggatcatgcagctggtgcaattgtcgtcacag 479 | ||||||||||||||||| |||| ||||| |||| Sbjct: 67580 tctgggatcatgcagctgggtcaatcgtcgtgacag 67615 Score = 143 bits (72), Expect = 8e-31 Identities = 177/212 (83%) Strand = Plus / Plus Query: 15 gtttcttgagaggaggccaatatgcaatcgcactggcactgcttgatgagggcaaagttg 74 ||||||| || |||| ||||||||| || || ||||| |||||||||||||| ||||||| Sbjct: 66973 gtttcttaaggggagaccaatatgctattgccctggctctgcttgatgagggtaaagttg 67032 Query: 75 ttttgggcgtgttgggatgtccaaatcttcctttgacattaataagcaaccttgatggta 134 ||||||| || |||| ||||| || ||| ||||| || |||| |||||||| ||||| Sbjct: 67033 ttttgggtgtattggcttgtcccaacctttctttgggatcaataggcaaccttaatggtg 67092 Query: 135 gctcatcaggagatcaaaccggggccctcttttcggctacaattggttgtggtgctgaag 194 |||| || ||||||||| || || |||||||| ||||| ||||||||||| ||||||| Sbjct: 67093 gctcctcgggagatcaagttggtgctctcttttctgctactattggttgtggagctgaag 67152 Query: 195 tagagtcattagagggctctccgccacaaaag 226 ||||||| ||| |||||||||| |||||||| Sbjct: 67153 tagagtctttacagggctctccagcacaaaag 67184 Score = 107 bits (54), Expect = 4e-20 Identities = 111/130 (85%) Strand = Plus / Plus Query: 477 cagaatctggaggtgtagtaacagatgcctcaggaaacgatcttgatttctcgaaagggc 536 ||||| |||||||| | || |||||||| |||||||||||| | |||||||| |||||| Sbjct: 67775 cagaagctggaggtctggtgacagatgcatcaggaaacgatttggatttctccaaaggga 67834 Query: 537 gatttcttgatgttgacacaggcatcattgccacaaataagcagttgatgccatcactcc 596 ||||||||||| | |||||||| ||||| || || || |||||| ||||||| ||||||| Sbjct: 67835 gatttcttgatctcgacacagggatcatcgcgacgaacaagcagctgatgccttcactcc 67894 Query: 597 tgaagtctgt 606 ||||| |||| Sbjct: 67895 tgaaggctgt 67904 Score = 101 bits (51), Expect = 3e-18 Identities = 90/103 (87%) Strand = Plus / Plus Query: 324 agaaacttggtgtccaagctcctccagtcagaatagatagccaagcaaaatatggtgctc 383 ||||||||||| | |||||||||||||| ||||| |||||||||||||||||||||||| Sbjct: 71152 agaaacttggtattcaagctcctccagttagaattgatagccaagcaaaatatggtgctg 71211 Query: 384 tggcccgtggcgatggtgccatttacttgcgttttccacacaa 426 | |||| || ||||| |||||||| | ||| ||||||||||| Sbjct: 71212 tagcccaaggtgatggcgccatttattggcgatttccacacaa 71254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 93/114 (81%) Strand = Plus / Plus Query: 477 cagaatctggaggtgtagtaacagatgcctcaggaaacgatcttgatttctcgaaagggc 536 ||||| |||||||| | |||| |||||| |||||||||||| | |||||||| ||||| Sbjct: 71411 cagaagctggaggtttggtaaaagatgcttcaggaaacgatttggatttctccaaaggta 71470 Query: 537 gatttcttgatgttgacacaggcatcattgccacaaataagcagttgatgccat 590 ||| ||||||| ||| | ||||| ||||| |||||||| | |||||||||| Sbjct: 71471 gatatcttgatcgtgatgctggcattattgcaacaaataaatatttgatgccat 71524 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 247 caatccagtgaatgcctcgttctttgaatcttatgaa 283 |||||||||| ||||||| |||||||||||||||||| Sbjct: 70992 caatccagtggatgcctcattctttgaatcttatgaa 71028 Score = 58.0 bits (29), Expect = 4e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 158 gccctcttttcggctacaattggttgtggtgctgaagtagagtcattagagggctctccg 217 ||||||||||| ||||||||||| ||||| || ||| ||||| ||||| ||||||| | Sbjct: 70798 gccctcttttctgctacaattggctgtggatctacagttgagtccttagaaggctctcag 70857 Query: 218 ccacaaaag 226 ||||||||| Sbjct: 70858 ccacaaaag 70866 Score = 58.0 bits (29), Expect = 4e-05 Identities = 83/101 (82%) Strand = Plus / Plus Query: 225 agattagtgtttgtaccatcgacaatccagtgaatgcctcgttctttgaatcttatgaag 284 |||||||||| ||| |||||||||||||||| | || || |||||||| || || |||| Sbjct: 67284 agattagtgtctgttccatcgacaatccagtcgaagcttcattctttgagtcctacgaag 67343 Query: 285 gagcacacacgatgcatgatttaactggctcgatagcggag 325 | |||||| | ||| ||||||||| ||||| || |||||| Sbjct: 67344 gggcacactccttgcgtgatttaacaggctccattgcggag 67384
>gb|AY110005.1| Zea mays CL14808_1 mRNA sequence Length = 1272 Score = 157 bits (79), Expect = 5e-35 Identities = 196/235 (83%) Strand = Plus / Minus Query: 170 gctacaattggttgtggtgctgaagtagagtcattagagggctctccgccacaaaagatt 229 ||||||||||||||||| || |||| ||| | ||||| || ||| ||||||||||||| Sbjct: 669 gctacaattggttgtggagcgcaagttgaggccttagaaggatctgagccacaaaagatt 610 Query: 230 agtgtttgtaccatcgacaatccagtgaatgcctcgttctttgaatcttatgaaggagca 289 |||||||| ||| | | |||||||| | ||||| ||||||||||| | ||||| | || Sbjct: 609 agtgtttgctccaccaataatccagttgacgcctcattctttgaatcctttgaagcatca 550 Query: 290 cacacgatgcatgatttaactggctcgatagcggagaaacttggtgtccaagctcctcca 349 ||| | | || |||||||||| |||| || || |||||||||||||||| ||||||||| Sbjct: 549 cactccaagcgtgatttaactagctccattgcagagaaacttggtgtccgagctcctcct 490 Query: 350 gtcagaatagatagccaagcaaaatatggtgctctggcccgtggcgatggtgcca 404 || ||||| ||||||||||||||||||||||| || || ||||| |||||||||| Sbjct: 489 gttagaatggatagccaagcaaaatatggtgccctagcacgtggtgatggtgcca 435 Score = 95.6 bits (48), Expect = 2e-16 Identities = 90/104 (86%) Strand = Plus / Minus Query: 2 gatggtactaaaggtttcttgagaggaggccaatatgcaatcgcactggcactgcttgat 61 ||||| |||||||||||| | || |||| || |||||| | ||||| | ||| |||||| Sbjct: 837 gatggcactaaaggtttcataaggggagatcagtatgcagttgcacttggactacttgat 778 Query: 62 gagggcaaagttgttttgggcgtgttgggatgtccaaatcttcc 105 ||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 777 gagggcaaagttgttctgggtgtgttgggatgtccaaatcttcc 734 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Minus Query: 446 tgggatcatgcagctggtgcaattgtcgtcacagaatctggaggtgtagtaacagatgcc 505 ||||||||||||||||| ||||| | ||||||||| |||| || | |||| ||||||| Sbjct: 393 tgggatcatgcagctggatcaattattgtcacagaagctggtggcatggtaaaagatgcc 334 Query: 506 tcaggaaacgat 517 ||||||||||| Sbjct: 333 gcaggaaacgat 322
>emb|AJ310755.1|GHI310755 Gossypium hirsutum partial mRNA for 3'(2'),5'-bisphosphate nucleotidase (f1 gene) Length = 990 Score = 89.7 bits (45), Expect = 1e-14 Identities = 159/197 (80%) Strand = Plus / Plus Query: 266 ttctttgaatcttatgaaggagcacacacgatgcatgatttaactggctcgatagcggag 325 |||||||| |||||||||| ||||||| | |||||||||||| || ||| ||| || | Sbjct: 279 ttctttgagtcttatgaagcagcacactccatgcatgatttatctagcttgattgcccaa 338 Query: 326 aaacttggtgtccaagctcctccagtcagaatagatagccaagcaaaatatggtgctctg 385 ||||| || ||| |||| || || || ||||| |||||||| ||||| ||||||||||| Sbjct: 339 aaactcggcgtcaaagcaccaccggttagaattgatagccaggcaaagtatggtgctcta 398 Query: 386 gcccgtggcgatggtgccatttacttgcgttttccacacaagggttataaggaaaagata 445 || | || ||||| ||||| || ||||| |||||||||| || ||| ||||| ||| Sbjct: 399 tccagaggagatggagccatatatctgcgtcttccacacaaagggtatcgagaaaaaata 458 Query: 446 tgggatcatgcagctgg 462 ||||||||||| ||||| Sbjct: 459 tgggatcatgctgctgg 475 Score = 56.0 bits (28), Expect = 1e-04 Identities = 85/104 (81%) Strand = Plus / Plus Query: 2 gatggtactaaaggtttcttgagaggaggccaatatgcaatcgcactggcactgcttgat 61 ||||||||||||||||| ||||||||| ||||||||||| ||| |||| |||| ||| Sbjct: 15 gatggtactaaaggttttctgagaggagatcaatatgcaatagcattggctttgctagat 74 Query: 62 gagggcaaagttgttttgggcgtgttgggatgtccaaatcttcc 105 | || |||||||| |||| ||| ||| |||| ||||||||| Sbjct: 75 ggaggaaaagttgtcctgggtgtgctggcttgtcaaaatcttcc 118 Score = 44.1 bits (22), Expect = 0.53 Identities = 43/50 (86%) Strand = Plus / Plus Query: 541 tcttgatgttgacacaggcatcattgccacaaataagcagttgatgccat 590 ||||||| | |||||||||||||||| ||| || || |||||||||||| Sbjct: 551 tcttgatctggacacaggcatcattgtcaccaaccagaagttgatgccat 600
>dbj|AB019227.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MBM17 Length = 52717 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 324 agaaacttggtgtccaagctcctccagtcagaatagatagccaagcaaaatatgg 378 ||||||| |||||| ||||||| |||||| | || |||||||||||||| ||||| Sbjct: 37500 agaaactcggtgtcaaagctccaccagtccgtattgatagccaagcaaagtatgg 37554
>ref|NM_125794.3| Arabidopsis thaliana SAL1; 3'(2'),5'-bisphosphate nucleotidase/ inositol or phosphatidylinositol phosphatase AT5G63980 (SAL1) mRNA, complete cds Length = 1330 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 326 aaacttggtgtccaagctcctccagtcagaatagatagccaagcaaaatatgg 378 ||||| |||||| ||||||| |||||| | || |||||||||||||| ||||| Sbjct: 878 aaactcggtgtcaaagctccaccagtccgtattgatagccaagcaaagtatgg 930
>gb|AY034894.1| Arabidopsis thaliana inositol polyphosphate 1-phosphatase FIERY1 (FRY1) mRNA, complete cds Length = 1062 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 326 aaacttggtgtccaagctcctccagtcagaatagatagccaagcaaaatatgg 378 ||||| |||||| ||||||| |||||| | || |||||||||||||| ||||| Sbjct: 739 aaactcggtgtcaaagctccaccagtccgtattgatagccaagcaaagtatgg 791
>emb|BX830296.1|CNS0A02J Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB71ZA10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1288 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 326 aaacttggtgtccaagctcctccagtcagaatagatagccaagcaaaatatgg 378 ||||| |||||| ||||||| |||||| | || |||||||||||||| ||||| Sbjct: 874 aaactcggtgtcaaagctccaccagtccgtattgatagccaagcaaagtatgg 926
>emb|BX831292.1|CNS09ZDI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS76ZB01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1297 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 326 aaacttggtgtccaagctcctccagtcagaatagatagccaagcaaaatatgg 378 ||||| |||||| ||||||| |||||| | || |||||||||||||| ||||| Sbjct: 879 aaactcggtgtcaaagctccaccagtccgtattgatagccaagcaaagtatgg 931
>emb|BX830691.1|CNS09ZGD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS14ZF01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1303 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 326 aaacttggtgtccaagctcctccagtcagaatagatagccaagcaaaatatgg 378 ||||| |||||| ||||||| |||||| | || |||||||||||||| ||||| Sbjct: 876 aaactcggtgtcaaagctccaccagtccgtattgatagccaagcaaagtatgg 928
>emb|BX831522.1|CNS09ZLC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH12ZC12 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1270 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 326 aaacttggtgtccaagctcctccagtcagaatagatagccaagcaaaatatgg 378 ||||| |||||| ||||||| |||||| | || |||||||||||||| ||||| Sbjct: 867 aaactcggtgtcaaagctccaccagtccgtattgatagccaagcaaagtatgg 919
>gb|BT005993.1| Arabidopsis thaliana At5g63980 gene, complete cds Length = 1062 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 326 aaacttggtgtccaagctcctccagtcagaatagatagccaagcaaaatatgg 378 ||||| |||||| ||||||| |||||| | || |||||||||||||| ||||| Sbjct: 739 aaactcggtgtcaaagctccaccagtccgtattgatagccaagcaaagtatgg 791
>gb|U40433.1|ATU40433 Arabidopsis thaliana 3'(2'),5'-bisphosphate nucleotidase (SAL1) mRNA, complete cds Length = 1328 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 326 aaacttggtgtccaagctcctccagtcagaatagatagccaagcaaaatatgg 378 ||||| |||||| ||||||| |||||| | || |||||||||||||| ||||| Sbjct: 846 aaactcggtgtcaaagctccaccagtccgtattgatagccaagcaaagtatgg 898
>ref|XM_468288.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1893 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 434 aaggaaaagatatgggatcatgcagctgg 462 ||||| ||||||||||||||||| ||||| Sbjct: 1226 aaggagaagatatgggatcatgccgctgg 1254
>gb|AC069158.6| Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0049O12, from chromosome 2, complete sequence Length = 155154 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 434 aaggaaaagatatgggatcatgcagctgg 462 ||||| ||||||||||||||||| ||||| Sbjct: 123322 aaggagaagatatgggatcatgccgctgg 123350
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 434 aaggaaaagatatgggatcatgcagctgg 462 ||||| ||||||||||||||||| ||||| Sbjct: 34381784 aaggagaagatatgggatcatgccgctgg 34381756
>emb|BX831628.1|CNS09ZO5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH1ZD02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 931 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/53 (84%) Strand = Plus / Plus Query: 326 aaacttggtgtccaagctcctccagtcagaatagatagccaagcaaaatatgg 378 ||||| ||||| ||||||| |||||| | || |||||||||||||| ||||| Sbjct: 525 aaactgggtgtaaaagctccaccagtccgtattgatagccaagcaaagtatgg 577
>dbj|AP004240.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1548_F12 Length = 118814 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 434 aaggaaaagatatgggatcatgcagctgg 462 ||||| ||||||||||||||||| ||||| Sbjct: 79431 aaggagaagatatgggatcatgccgctgg 79403
>dbj|AK065057.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001J07, full insert sequence Length = 1893 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 434 aaggaaaagatatgggatcatgcagctgg 462 ||||| ||||||||||||||||| ||||| Sbjct: 1226 aaggagaagatatgggatcatgccgctgg 1254
>emb|AL162872.4|CNS01RI5 Human chromosome 14 DNA sequence BAC R-764E10 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 173106 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 433 taaggaaaagatatgggatca 453 ||||||||||||||||||||| Sbjct: 111885 taaggaaaagatatgggatca 111865
>dbj|AP002886.3| Homo sapiens genomic DNA, chromosome 11q clone:RP11-1133J7, complete sequences Length = 168406 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 348 cagtcagaatagatagccaag 368 ||||||||||||||||||||| Sbjct: 163202 cagtcagaatagatagccaag 163222
>dbj|AP003775.3| Homo sapiens genomic DNA, chromosome 11q clone:RP11-206H19, complete sequences Length = 179680 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 348 cagtcagaatagatagccaag 368 ||||||||||||||||||||| Sbjct: 8391 cagtcagaatagatagccaag 8411
>ref|XM_534124.2| PREDICTED: Canis familiaris similar to L-plastin (Lymphocyte cytosolic protein 1) (LCP-1) (LC64P), transcript variant 1 (LOC476921), mRNA Length = 3110 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 537 gatttcttgatgttgacaca 556 |||||||||||||||||||| Sbjct: 2560 gatttcttgatgttgacaca 2579
>ref|XM_843311.1| PREDICTED: Canis familiaris similar to L-plastin (Lymphocyte cytosolic protein 1) (LCP-1) (LC64P), transcript variant 2 (LOC476921), mRNA Length = 3116 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 537 gatttcttgatgttgacaca 556 |||||||||||||||||||| Sbjct: 2566 gatttcttgatgttgacaca 2585
>emb|AL357059.13| Human DNA sequence from clone RP11-153G5 on chromosome 10 Contains part of a novel gene (KIAA0534), complete sequence Length = 74127 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 431 tataaggaaaagatatggga 450 |||||||||||||||||||| Sbjct: 14057 tataaggaaaagatatggga 14038
>emb|CR626941.10| Zebrafish DNA sequence from clone DKEY-12J5 in linkage group 16, complete sequence Length = 238554 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 438 aaaagatatgggatcatgca 457 |||||||||||||||||||| Sbjct: 87458 aaaagatatgggatcatgca 87439
>gb|AC103808.2| Homo sapiens chromosome 18, clone RP11-94B19, complete sequence Length = 152722 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 550 tgacacaggcatcattgcca 569 |||||||||||||||||||| Sbjct: 5092 tgacacaggcatcattgcca 5073
>gb|DP000060.1| Atelerix albiventris target 117 genomic scaffold Length = 527158 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 590 tcactcctgaagtctgtcca 609 |||||||||||||||||||| Sbjct: 376724 tcactcctgaagtctgtcca 376743
>gb|AC091742.5| Homo sapiens BAC clone RP11-1220K2 from 7, complete sequence Length = 191041 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 357 tagatagccaagcaaaatatggtg 380 ||||||| |||||||||||||||| Sbjct: 151935 tagataggcaagcaaaatatggtg 151912
>gb|AC022302.7|AC022302 Homo sapiens chromosome 15 clone CTD-2019H15 map 15q21.2, complete sequence Length = 176872 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 139 atcaggagatcaaaccggggccct 162 |||||||||||||||||| ||||| Sbjct: 33507 atcaggagatcaaaccggagccct 33530
>gb|AC018878.8| Homo sapiens BAC clone RP11-297N12 from 2, complete sequence Length = 170801 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 278 tatgaaggagcacacacgatgcat 301 ||||||| |||||||||||||||| Sbjct: 136369 tatgaagaagcacacacgatgcat 136392
>gb|AC009716.22| Homo sapiens chromosome 18, clone RP11-504I13, complete sequence Length = 211981 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 550 tgacacaggcatcattgcca 569 |||||||||||||||||||| Sbjct: 202713 tgacacaggcatcattgcca 202694
>emb|AL954144.6| Zebrafish DNA sequence from clone CH211-206L15, complete sequence Length = 156893 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 tcctttgacattaataagca 122 |||||||||||||||||||| Sbjct: 32678 tcctttgacattaataagca 32659 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,844,847 Number of Sequences: 3902068 Number of extensions: 4844847 Number of successful extensions: 83396 Number of sequences better than 10.0: 38 Number of HSP's better than 10.0 without gapping: 38 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 83219 Number of HSP's gapped (non-prelim): 176 length of query: 609 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 586 effective length of database: 17,143,297,704 effective search space: 10045972454544 effective search space used: 10045972454544 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)