ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags12n04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_192684.1| Oryza sativa (japonica cultivar-group), predic... 464 e-127
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 373 e-100
3dbj|AP003303.4| Oryza sativa (japonica cultivar-group) genomic D... 373 e-100
4dbj|AP003022.2| Oryza sativa (japonica cultivar-group) genomic D... 373 e-100
5emb|AL118508.27|HSJ737E23 Human DNA sequence from clone RP4-737E... 44 0.47
6gb|AC123698.15| Mus musculus chromosome 15, clone RP23-331P14, c... 42 1.9
7gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome 42 1.9
8gb|CP000099.1| Methanosarcina barkeri str. fusaro chromosome 1, ... 42 1.9
9gb|BC095709.1| Danio rerio zgc:112259, mRNA (cDNA clone MGC:1122... 42 1.9
10ref|NM_001020765.1| Danio rerio zgc:112259 (zgc:112259), mRNA 42 1.9
11gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome 42 1.9
12gb|AC096727.3| Homo sapiens BAC clone RP11-35D5 from 4, complete... 42 1.9
13gb|AC074315.79| Mus musculus strain C57BL/6J clone rp23-445c23 m... 42 1.9
14gb|AC171003.2| Mus musculus BAC clone RP23-207H9 from chromosome... 42 1.9
15gb|AC113271.10| Mus musculus chromosome 5, clone RP23-376H8, com... 40 7.3
16gb|AY574035.1| Zea mays rust resistance protein rp3-1 (rp3-1) ge... 40 7.3
17gb|AC113277.8| Mus musculus chromosome 3, clone RP23-386C15, com... 40 7.3
18gb|AC161056.5| Mus musculus BAC clone RP23-241J7 from chromosome... 40 7.3
19gb|AC087430.3| Homo sapiens chromosome 3 clone RP11-242C8 map 3p... 40 7.3
20gb|AC143341.8| Medicago truncatula clone mth2-7a11, complete seq... 40 7.3
21gb|AC144722.11| Medicago truncatula clone mth2-26h11, complete s... 40 7.3
22gb|AC137996.33| Medicago truncatula clone mth2-19k16, complete s... 40 7.3
23gb|AC109192.9| Mus musculus, clone RP24-360F5, complete sequence 40 7.3
24emb|AL731680.8| Human DNA sequence from clone RP11-152I12 on chr... 40 7.3
25gb|BC044734.2| Mus musculus ST6 (alpha-N-acetyl-neuraminyl-2,3-b... 40 7.3
26emb|AJ252741.1|HTU252741 Haliotis tuberculata partial H1 gene fo... 40 7.3
27emb|CR925699.6| Zebrafish DNA sequence from clone RP71-18J1 in l... 40 7.3
28gb|AC084761.2| Gallus gallus clone WAG-69H2, complete sequence 40 7.3
29gb|AC087179.2| Gallus gallus clone WAG-55C14, complete sequence 40 7.3
30gb|AC027708.12| Homo sapiens chromosome 15, clone RP11-82I10, co... 40 7.3
31dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, co... 40 7.3
32gb|AC099056.2| Homo sapiens chromosome 3 clone RP11-585O21, comp... 40 7.3
33gb|AC012690.17| Homo sapiens chromosome 10 clone RP11-127B19, co... 40 7.3
34dbj|AP007159.1| Aspergillus oryzae RIB40 genomic DNA, SC026 40 7.3
35dbj|AK147512.1| Mus musculus cDNA, RIKEN full-length enriched li... 40 7.3
36gb|AC160141.2| Gallus gallus BAC clone CH261-182D6 from chromoso... 40 7.3
37dbj|AK159712.1| Mus musculus osteoclast-like cell cDNA, RIKEN fu... 40 7.3
38gb|AC007175.1|AC007175 Drosophila melanogaster, chromosome 2R, r... 40 7.3
39gb|AC116740.11| Mus musculus chromosome 3, clone RP23-446B17, co... 40 7.3
40gb|CP000033.1| Lactobacillus acidophilus NCFM, complete genome 40 7.3
41emb|CR383662.9| Zebrafish DNA sequence from clone DKEY-207J16 in... 40 7.3
42gb|AE003453.3| Drosophila melanogaster chromosome 2R, section 61... 40 7.3
43emb|AJ810494.1| Carica papaya microsatellite CpCIR7 40 7.3
44emb|CT030255.8| Mouse DNA sequence from clone RP23-267P22 on chr... 40 7.3
45emb|CT009690.15| Pig DNA sequence from clone CH242-207C21 on chr... 40 7.3
46gb|AC159010.2| Gallus gallus BAC clone CH261-115H16 from chromos... 40 7.3
47gb|AC123878.4| Mus musculus BAC clone RP23-318I20 from 3, comple... 40 7.3
48emb|AL772271.11| Mouse DNA sequence from clone RP23-17P12 on chr... 40 7.3
49gb|AC161166.7| Mus musculus chromosome 7, clone RP23-26A14, comp... 40 7.3
50emb|Y19053.1|MMU19053 Mus musculus partial ST6GalNAc IV gene for... 40 7.3 
>ref|NM_192684.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2505

 Score =  464 bits (234), Expect = e-127
 Identities = 450/521 (86%), Gaps = 1/521 (0%)
 Strand = Plus / Plus

                                                                        
Query: 10   ttataacgtgcgaggcatgtggtgcacgtctcctctttacctctccttcctcgtggnaca 69
            |||||||||| ||||||||||  ||||| || || ||  || |||||||||| |||  ||
Sbjct: 797  ttataacgtgtgaggcatgtgaggcacggcttctgttctccactccttcctcatggg-ca 855

                                                                        
Query: 70   ccacagcaagttgaaaaggctgcttctgttttcagcttgaagctggacactggacacaaa 129
            || ||||||||||||||||||||| ||||||| |||||||||||||||| |||||| |||
Sbjct: 856  ccgcagcaagttgaaaaggctgctgctgtttttagcttgaagctggacaatggacataaa 915

                                                                        
Query: 130  ctactctgtccatggattgacaacatatgtgatgaatcacttgccttatttccacccaca 189
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 916  ctactctgtccatggattgacaacatatgtgatgaatcacttgccttatttccaccaaca 975

                                                                        
Query: 190  cctcctcctgttttagtcgagaactactacgagtgcttctcatctctgctgcggctttca 249
            || |||||||||||||| ||||| ||| ||||| | ||||| || || || || || |||
Sbjct: 976  ccacctcctgttttagttgagaattaccacgagggtttctcctcacttctacgactctca 1035

                                                                        
Query: 250  tcacttccaagaatttcactctcttctctggatatcatgaggaagcggagtccacagcta 309
             ||||||||||||| ||   |||||||||||| | ||||| |||| |||| |||||||||
Sbjct: 1036 gcacttccaagaatctcgtgctcttctctggagagcatgaagaagaggagcccacagcta 1095

                                                                        
Query: 310  gaacagttcctattggagccgttctcttcatcagttgtccttaaagggggatttatgctt 369
            || ||||| |||||| | |||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1096 gagcagtttctattgaaaccgttctcttcatcagttgtccttaaagggggatttatactt 1155

                                                                        
Query: 370  actgaagactcaactattagggatctagatggcacttttcaagatgctggcatatattat 429
            |||||||| ||||| |||| |||| | |||  ||||||||||||||||| || |||||||
Sbjct: 1156 actgaagattcaacaattaaggatttggatcacacttttcaagatgctgacacatattat 1215

                                                                        
Query: 430  gaggcactcaagataataagcttatgtggatgggaaccacgcctacttcactatgctgtt 489
             ||||| | ||||||||||| || ||||| |||||||| ||| | || | ||||||||||
Sbjct: 1216 caggcattgaagataataagtttgtgtggttgggaaccccgcttgctaccctatgctgtt 1275

                                                     
Query: 490  gattgtgcaaccaaatctcacccagatgcaagctctacctc 530
            ||||||| ||| ||||||||  ||||||||| |||| ||||
Sbjct: 1276 gattgtggaactaaatctcattcagatgcaaactcttcctc 1316
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  373 bits (188), Expect = e-100
 Identities = 311/352 (88%)
 Strand = Plus / Plus

                                                                            
Query: 78       agttgaaaaggctgcttctgttttcagcttgaagctggacactggacacaaactactctg 137
                |||||||||||||||| ||||||| |||||||||||||||| |||||| |||||||||||
Sbjct: 23854283 agttgaaaaggctgctgctgtttttagcttgaagctggacaatggacataaactactctg 23854342

                                                                            
Query: 138      tccatggattgacaacatatgtgatgaatcacttgccttatttccacccacacctcctcc 197
                |||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||
Sbjct: 23854343 tccatggattgacaacatatgtgatgaatcacttgccttatttccaccaacaccacctcc 23854402

                                                                            
Query: 198      tgttttagtcgagaactactacgagtgcttctcatctctgctgcggctttcatcacttcc 257
                ||||||||| ||||| ||| ||||| | ||||| || || || || || ||| |||||||
Sbjct: 23854403 tgttttagttgagaattaccacgagggtttctcctcacttctacgactctcagcacttcc 23854462

                                                                            
Query: 258      aagaatttcactctcttctctggatatcatgaggaagcggagtccacagctagaacagtt 317
                |||||| ||   |||||||||||| | ||||| |||| |||| ||||||||||| |||||
Sbjct: 23854463 aagaatctcgtgctcttctctggagagcatgaagaagaggagcccacagctagagcagtt 23854522

                                                                            
Query: 318      cctattggagccgttctcttcatcagttgtccttaaagggggatttatgcttactgaaga 377
                 |||||| | |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 23854523 tctattgaaaccgttctcttcatcagttgtccttaaagggggatttatacttactgaaga 23854582

                                                                    
Query: 378      ctcaactattagggatctagatggcacttttcaagatgctggcatatattat 429
                 ||||| |||| |||| | |||  ||||||||||||||||| || |||||||
Sbjct: 23854583 ttcaacaattaaggatttggatcacacttttcaagatgctgacacatattat 23854634



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 78/92 (84%)
 Strand = Plus / Plus

                                                                            
Query: 439      aagataataagcttatgtggatgggaaccacgcctacttcactatgctgttgattgtgca 498
                ||||||||||| || ||||| |||||||| ||| | || | ||||||||||||||||| |
Sbjct: 23855531 aagataataagtttgtgtggttgggaaccccgcttgctaccctatgctgttgattgtgga 23855590

                                                
Query: 499      accaaatctcacccagatgcaagctctacctc 530
                || ||||||||  ||||||||| |||| ||||
Sbjct: 23855591 actaaatctcattcagatgcaaactcttcctc 23855622
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>dbj|AP003303.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0704D04
          Length = 147638

 Score =  373 bits (188), Expect = e-100
 Identities = 311/352 (88%)
 Strand = Plus / Plus

                                                                        
Query: 78   agttgaaaaggctgcttctgttttcagcttgaagctggacactggacacaaactactctg 137
            |||||||||||||||| ||||||| |||||||||||||||| |||||| |||||||||||
Sbjct: 687  agttgaaaaggctgctgctgtttttagcttgaagctggacaatggacataaactactctg 746

                                                                        
Query: 138  tccatggattgacaacatatgtgatgaatcacttgccttatttccacccacacctcctcc 197
            |||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||
Sbjct: 747  tccatggattgacaacatatgtgatgaatcacttgccttatttccaccaacaccacctcc 806

                                                                        
Query: 198  tgttttagtcgagaactactacgagtgcttctcatctctgctgcggctttcatcacttcc 257
            ||||||||| ||||| ||| ||||| | ||||| || || || || || ||| |||||||
Sbjct: 807  tgttttagttgagaattaccacgagggtttctcctcacttctacgactctcagcacttcc 866

                                                                        
Query: 258  aagaatttcactctcttctctggatatcatgaggaagcggagtccacagctagaacagtt 317
            |||||| ||   |||||||||||| | ||||| |||| |||| ||||||||||| |||||
Sbjct: 867  aagaatctcgtgctcttctctggagagcatgaagaagaggagcccacagctagagcagtt 926

                                                                        
Query: 318  cctattggagccgttctcttcatcagttgtccttaaagggggatttatgcttactgaaga 377
             |||||| | |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 927  tctattgaaaccgttctcttcatcagttgtccttaaagggggatttatacttactgaaga 986

                                                                
Query: 378  ctcaactattagggatctagatggcacttttcaagatgctggcatatattat 429
             ||||| |||| |||| | |||  ||||||||||||||||| || |||||||
Sbjct: 987  ttcaacaattaaggatttggatcacacttttcaagatgctgacacatattat 1038



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 78/92 (84%)
 Strand = Plus / Plus

                                                                        
Query: 439  aagataataagcttatgtggatgggaaccacgcctacttcactatgctgttgattgtgca 498
            ||||||||||| || ||||| |||||||| ||| | || | ||||||||||||||||| |
Sbjct: 1935 aagataataagtttgtgtggttgggaaccccgcttgctaccctatgctgttgattgtgga 1994

                                            
Query: 499  accaaatctcacccagatgcaagctctacctc 530
            || ||||||||  ||||||||| |||| ||||
Sbjct: 1995 actaaatctcattcagatgcaaactcttcctc 2026
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>dbj|AP003022.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0681B11
          Length = 144091

 Score =  373 bits (188), Expect = e-100
 Identities = 311/352 (88%)
 Strand = Plus / Plus

                                                                          
Query: 78     agttgaaaaggctgcttctgttttcagcttgaagctggacactggacacaaactactctg 137
              |||||||||||||||| ||||||| |||||||||||||||| |||||| |||||||||||
Sbjct: 134868 agttgaaaaggctgctgctgtttttagcttgaagctggacaatggacataaactactctg 134927

                                                                          
Query: 138    tccatggattgacaacatatgtgatgaatcacttgccttatttccacccacacctcctcc 197
              |||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||
Sbjct: 134928 tccatggattgacaacatatgtgatgaatcacttgccttatttccaccaacaccacctcc 134987

                                                                          
Query: 198    tgttttagtcgagaactactacgagtgcttctcatctctgctgcggctttcatcacttcc 257
              ||||||||| ||||| ||| ||||| | ||||| || || || || || ||| |||||||
Sbjct: 134988 tgttttagttgagaattaccacgagggtttctcctcacttctacgactctcagcacttcc 135047

                                                                          
Query: 258    aagaatttcactctcttctctggatatcatgaggaagcggagtccacagctagaacagtt 317
              |||||| ||   |||||||||||| | ||||| |||| |||| ||||||||||| |||||
Sbjct: 135048 aagaatctcgtgctcttctctggagagcatgaagaagaggagcccacagctagagcagtt 135107

                                                                          
Query: 318    cctattggagccgttctcttcatcagttgtccttaaagggggatttatgcttactgaaga 377
               |||||| | |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 135108 tctattgaaaccgttctcttcatcagttgtccttaaagggggatttatacttactgaaga 135167

                                                                  
Query: 378    ctcaactattagggatctagatggcacttttcaagatgctggcatatattat 429
               ||||| |||| |||| | |||  ||||||||||||||||| || |||||||
Sbjct: 135168 ttcaacaattaaggatttggatcacacttttcaagatgctgacacatattat 135219



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 78/92 (84%)
 Strand = Plus / Plus

                                                                          
Query: 439    aagataataagcttatgtggatgggaaccacgcctacttcactatgctgttgattgtgca 498
              ||||||||||| || ||||| |||||||| ||| | || | ||||||||||||||||| |
Sbjct: 136116 aagataataagtttgtgtggttgggaaccccgcttgctaccctatgctgttgattgtgga 136175

                                              
Query: 499    accaaatctcacccagatgcaagctctacctc 530
              || ||||||||  ||||||||| |||| ||||
Sbjct: 136176 actaaatctcattcagatgcaaactcttcctc 136207
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>emb|AL118508.27|HSJ737E23 Human DNA sequence from clone RP4-737E23 on chromosome 20p11.1-11.23
             Contains the gene complement component C1q receptor
             (C1QR), a putative novel gene, ESTs, STSs and GSSs,
             complete sequence
          Length = 123832

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 174   cttatttccacccacacctcctcctg 199
             ||||| ||||||||||||||||||||
Sbjct: 78267 cttatctccacccacacctcctcctg 78242
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>gb|AC123698.15| Mus musculus chromosome 15, clone RP23-331P14, complete sequence
          Length = 201739

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 439   aagataataagcttatgtgga 459
             |||||||||||||||||||||
Sbjct: 19546 aagataataagcttatgtgga 19566
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>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 93      ttctgttttcagcttgaagct 113
               |||||||||||||||||||||
Sbjct: 1671080 ttctgttttcagcttgaagct 1671060
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>gb|CP000099.1| Methanosarcina barkeri str. fusaro chromosome 1, complete sequence
          Length = 4837408

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 155     tatgtgatgaatcacttgcct 175
               |||||||||||||||||||||
Sbjct: 3156838 tatgtgatgaatcacttgcct 3156818
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>gb|BC095709.1| Danio rerio zgc:112259, mRNA (cDNA clone MGC:112259 IMAGE:7240673),
           complete cds
          Length = 1572

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 82  gaaaaggctgcttctgttttc 102
           |||||||||||||||||||||
Sbjct: 568 gaaaaggctgcttctgttttc 548
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>ref|NM_001020765.1| Danio rerio zgc:112259 (zgc:112259), mRNA
          Length = 1572

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 82  gaaaaggctgcttctgttttc 102
           |||||||||||||||||||||
Sbjct: 568 gaaaaggctgcttctgttttc 548
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>gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome
          Length = 5751492

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 155     tatgtgatgaatcacttgcct 175
               |||||||||||||||||||||
Sbjct: 2189124 tatgtgatgaatcacttgcct 2189144
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>gb|AC096727.3| Homo sapiens BAC clone RP11-35D5 from 4, complete sequence
          Length = 157078

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 115   gacactggacacaaactactc 135
             |||||||||||||||||||||
Sbjct: 77410 gacactggacacaaactactc 77430
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>gb|AC074315.79| Mus musculus strain C57BL/6J clone rp23-445c23 map 15, complete
             sequence
          Length = 177864

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 439   aagataataagcttatgtgga 459
             |||||||||||||||||||||
Sbjct: 29834 aagataataagcttatgtgga 29814
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>gb|AC171003.2| Mus musculus BAC clone RP23-207H9 from chromosome 13, complete sequence
          Length = 218821

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 261   aatttcactctcttctctgga 281
             |||||||||||||||||||||
Sbjct: 56561 aatttcactctcttctctgga 56581
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>gb|AC113271.10| Mus musculus chromosome 5, clone RP23-376H8, complete sequence
          Length = 185353

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 37    gtctcctctttacctctccttcct 60
             ||||| ||||||||||||||||||
Sbjct: 85674 gtctcatctttacctctccttcct 85651
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>gb|AY574035.1| Zea mays rust resistance protein rp3-1 (rp3-1) gene, complete cds; and
             truncated rust resistance protein rp3-2t (rp3-2) gene,
             complete sequence
          Length = 276326

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 320   tattggagccgttctcttca 339
             ||||||||||||||||||||
Sbjct: 53756 tattggagccgttctcttca 53737
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>gb|AC113277.8| Mus musculus chromosome 3, clone RP23-386C15, complete sequence
          Length = 210390

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 169    cttgccttatttccacccacacct 192
              |||||||| |||||||||||||||
Sbjct: 205374 cttgccttctttccacccacacct 205351
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>gb|AC161056.5| Mus musculus BAC clone RP23-241J7 from chromosome 3, complete sequence
          Length = 226878

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 115    gacactggacacaaactact 134
              ||||||||||||||||||||
Sbjct: 137075 gacactggacacaaactact 137094
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>gb|AC087430.3| Homo sapiens chromosome 3 clone RP11-242C8 map 3p, complete sequence
          Length = 152289

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 347   tccttaaagggggatttatg 366
             ||||||||||||||||||||
Sbjct: 39150 tccttaaagggggatttatg 39169
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>gb|AC143341.8| Medicago truncatula clone mth2-7a11, complete sequence
          Length = 111446

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 145   attgacaacatatgtgatgaatca 168
             ||||| ||||||||||||||||||
Sbjct: 75624 attgagaacatatgtgatgaatca 75647
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>gb|AC144722.11| Medicago truncatula clone mth2-26h11, complete sequence
          Length = 122089

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 484   gctgttgattgtgcaaccaaatct 507
             ||||||||||||||||||| ||||
Sbjct: 79388 gctgttgattgtgcaaccatatct 79411
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>gb|AC137996.33| Medicago truncatula clone mth2-19k16, complete sequence
          Length = 122085

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 484   gctgttgattgtgcaaccaaatct 507
             ||||||||||||||||||| ||||
Sbjct: 79387 gctgttgattgtgcaaccatatct 79410
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>gb|AC109192.9| Mus musculus, clone RP24-360F5, complete sequence
          Length = 163237

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 123   acacaaactactctgtccat 142
             ||||||||||||||||||||
Sbjct: 43734 acacaaactactctgtccat 43753
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>emb|AL731680.8| Human DNA sequence from clone RP11-152I12 on chromosome 10 Contains the
             3' end of the FGFR2 gene for fibroblast growth factor
             receptor 2, complete sequence
          Length = 62988

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 89    ctgcttctgttttcagcttg 108
             ||||||||||||||||||||
Sbjct: 42521 ctgcttctgttttcagcttg 42502
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>gb|BC044734.2| Mus musculus ST6
           (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,
           3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase
           4, mRNA (cDNA clone IMAGE:5370634), containing
           frame-shift errors
          Length = 1022

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 36  cgtctcctctttacctctccttcc 59
           |||||||||||| |||||||||||
Sbjct: 277 cgtctcctctttgcctctccttcc 300
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>emb|AJ252741.1|HTU252741 Haliotis tuberculata partial H1 gene for hemocyanin, exons 1-17
          Length = 28163

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 113   tggacactggacacaaacta 132
             ||||||||||||||||||||
Sbjct: 16894 tggacactggacacaaacta 16875
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>emb|CR925699.6| Zebrafish DNA sequence from clone RP71-18J1 in linkage group 4,
             complete sequence
          Length = 150030

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 164   aatcacttgccttatttcca 183
             ||||||||||||||||||||
Sbjct: 96218 aatcacttgccttatttcca 96199
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>gb|AC084761.2| Gallus gallus clone WAG-69H2, complete sequence
          Length = 135273

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 149  acaacatatgtgatgaatca 168
            ||||||||||||||||||||
Sbjct: 4008 acaacatatgtgatgaatca 3989
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>gb|AC087179.2| Gallus gallus clone WAG-55C14, complete sequence
          Length = 55589

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 149   acaacatatgtgatgaatca 168
             ||||||||||||||||||||
Sbjct: 38184 acaacatatgtgatgaatca 38165
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>gb|AC027708.12| Homo sapiens chromosome 15, clone RP11-82I10, complete sequence
          Length = 176613

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 520   agctctacctccatatttgc 539
             ||||||||||||||||||||
Sbjct: 53309 agctctacctccatatttgc 53290
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>dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, complete genome
          Length = 5727534

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 228     ctcatctctgctgcggcttt 247
               ||||||||||||||||||||
Sbjct: 2436141 ctcatctctgctgcggcttt 2436160



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 265     tcactctcttctctggatatcatg 288
               |||| |||||||||||||||||||
Sbjct: 1570737 tcacgctcttctctggatatcatg 1570714
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>gb|AC099056.2| Homo sapiens chromosome 3 clone RP11-585O21, complete sequence
          Length = 182405

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 171    tgccttatttccacccacacctcc 194
              |||||||||||||||||| |||||
Sbjct: 108922 tgccttatttccacccactcctcc 108899
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>gb|AC012690.17| Homo sapiens chromosome 10 clone RP11-127B19, complete sequence
          Length = 161276

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 89    ctgcttctgttttcagcttg 108
             ||||||||||||||||||||
Sbjct: 70930 ctgcttctgttttcagcttg 70911
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>dbj|AP007159.1| Aspergillus oryzae RIB40 genomic DNA, SC026
          Length = 2324132

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 73     cagcaagttgaaaaggctgc 92
              ||||||||||||||||||||
Sbjct: 685196 cagcaagttgaaaaggctgc 685215
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>dbj|AK147512.1| Mus musculus cDNA, RIKEN full-length enriched library,
            clone:M5C1057L08 product:hypothetical protein, full
            insert sequence
          Length = 9777

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 37   gtctcctctttacctctccttcct 60
            ||||| ||||||||||||||||||
Sbjct: 2015 gtctcatctttacctctccttcct 1992
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>gb|AC160141.2| Gallus gallus BAC clone CH261-182D6 from chromosome unknown, complete
            sequence
          Length = 240564

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 149  acaacatatgtgatgaatca 168
            ||||||||||||||||||||
Sbjct: 4926 acaacatatgtgatgaatca 4907
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>dbj|AK159712.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched
           library, clone:I420028M23 product:sialyltransferase 7
           ((alpha-N-acetylneuraminyl
           2,3-betagalactosyl-1,3)-N-acetyl galactosaminide
           alpha-2,6-sialyltransferase) D, full insert sequence
          Length = 3161

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 36  cgtctcctctttacctctccttcc 59
           |||||||||||| |||||||||||
Sbjct: 323 cgtctcctctttgcctctccttcc 346
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>gb|AC007175.1|AC007175 Drosophila melanogaster, chromosome 2R, region 57D3-57E2, BAC clones
              DS01261 and BACR48K03, complete sequence
          Length = 188633

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 446    taagcttatgtggatgggaa 465
              ||||||||||||||||||||
Sbjct: 117778 taagcttatgtggatgggaa 117759
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>gb|AC116740.11| Mus musculus chromosome 3, clone RP23-446B17, complete sequence
          Length = 173065

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 169   cttgccttatttccacccacacct 192
             |||||||| |||||||||||||||
Sbjct: 33471 cttgccttctttccacccacacct 33448
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>gb|CP000033.1| Lactobacillus acidophilus NCFM, complete genome
          Length = 1993564

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 83     aaaaggctgcttctgttttc 102
              ||||||||||||||||||||
Sbjct: 458691 aaaaggctgcttctgttttc 458672
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>emb|CR383662.9| Zebrafish DNA sequence from clone DKEY-207J16 in linkage group 4,
             complete sequence
          Length = 174773

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 164   aatcacttgccttatttcca 183
             ||||||||||||||||||||
Sbjct: 20832 aatcacttgccttatttcca 20851
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>gb|AE003453.3| Drosophila melanogaster chromosome 2R, section 61 of 73 of the complete
              sequence
          Length = 305143

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 446    taagcttatgtggatgggaa 465
              ||||||||||||||||||||
Sbjct: 286175 taagcttatgtggatgggaa 286156
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>emb|AJ810494.1| Carica papaya microsatellite CpCIR7
          Length = 512

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 328 ccgttctcttcatcagttgtcctt 351
           ||||||||||||| ||||||||||
Sbjct: 187 ccgttctcttcatgagttgtcctt 210
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>emb|CT030255.8| Mouse DNA sequence from clone RP23-267P22 on chromosome 16, complete
              sequence
          Length = 178284

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 123    acacaaactactctgtccat 142
              ||||||||||||||||||||
Sbjct: 172761 acacaaactactctgtccat 172780
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>emb|CT009690.15| Pig DNA sequence from clone CH242-207C21 on chromosome 7, complete
             sequence
          Length = 94949

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 178   tttccacccacacctcctcc 197
             ||||||||||||||||||||
Sbjct: 31374 tttccacccacacctcctcc 31355
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>gb|AC159010.2| Gallus gallus BAC clone CH261-115H16 from chromosome unknown, complete
             sequence
          Length = 209348

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 149   acaacatatgtgatgaatca 168
             ||||||||||||||||||||
Sbjct: 77071 acaacatatgtgatgaatca 77090
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>gb|AC123878.4| Mus musculus BAC clone RP23-318I20 from 3, complete sequence
          Length = 215121

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 115   gacactggacacaaactact 134
             ||||||||||||||||||||
Sbjct: 69985 gacactggacacaaactact 69966
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>emb|AL772271.11| Mouse DNA sequence from clone RP23-17P12 on chromosome 2, complete
            sequence
          Length = 204136

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 36   cgtctcctctttacctctccttcc 59
            |||||||||||| |||||||||||
Sbjct: 2271 cgtctcctctttgcctctccttcc 2294
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>gb|AC161166.7| Mus musculus chromosome 7, clone RP23-26A14, complete sequence
          Length = 250028

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 175   ttatttccacccacacctcctcct 198
             |||| |||||||||||||||||||
Sbjct: 70334 ttatctccacccacacctcctcct 70357
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>emb|Y19053.1|MMU19053 Mus musculus partial ST6GalNAc IV gene for GalNAc
           alpha-2,6-sialyltransferase, exons 1 and 2
          Length = 1254

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 36  cgtctcctctttacctctccttcc 59
           |||||||||||| |||||||||||
Sbjct: 972 cgtctcctctttgcctctccttcc 995


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,806,017
Number of Sequences: 3902068
Number of extensions: 4806017
Number of successful extensions: 121000
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 120777
Number of HSP's gapped (non-prelim): 223
length of query: 540
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 517
effective length of database: 17,143,297,704
effective search space: 8863084912968
effective search space used: 8863084912968
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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