| Clone Name | bags12n02 |
|---|---|
| Clone Library Name | barley_pub |
>OST48_CAEEL (P45971) Probable dolichyl-diphosphooligosaccharide--protein| glycosyltransferase 48 kDa subunit precursor (EC 2.4.1.119) (Oligosaccharyl transferase 48 kDa subunit) Length = 445 Score = 82.8 bits (203), Expect(2) = 3e-18 Identities = 43/98 (43%), Positives = 64/98 (65%) Frame = +3 Query: 48 TPXIAGDDLIQSDVILGSKKIEAPVLFRGIGHAANPSNSLVLKVLSASPSAYSANPGTKL 227 T + D LI +++I+G+ PVLF+GIG A +N+L L ++ AS +AYS +P Sbjct: 149 TLVVGKDQLISAELIVGNSAKLHPVLFKGIGLVAGKTNNLALSIVRASGTAYSYDPKAVR 208 Query: 228 ASVPSLTGSAISLVSVMQARNNARVLISGSLDLFSNRF 341 A+ PS+ GS LV +Q+RNNAR++ +GS +LFSN F Sbjct: 209 ATNPSIAGSRTLLVGGLQSRNNARIVFTGSSELFSNTF 246 Score = 26.6 bits (57), Expect(2) = 3e-18 Identities = 11/17 (64%), Positives = 11/17 (64%) Frame = +2 Query: 2 VIDHINYASTESEGDHT 52 VIDH NY T GDHT Sbjct: 132 VIDHHNYDQTLDSGDHT 148
>OST48_CHICK (P48440) Dolichyl-diphosphooligosaccharide--protein| glycosyltransferase 48 kDa subunit (EC 2.4.1.119) (Oligosaccharyl transferase 48 kDa subunit) (OST 50 kDa subunit) (DDOST 48 kDa subunit) Length = 413 Score = 80.9 bits (198), Expect = 7e-16 Identities = 40/92 (43%), Positives = 60/92 (65%) Frame = +3 Query: 66 DDLIQSDVILGSKKIEAPVLFRGIGHAANPSNSLVLKVLSASPSAYSANPGTKLASVPSL 245 ++L+++ I+G K + P+LFRG+G A+P N LVL +L+ S ++YS P + P Sbjct: 135 ENLLKAPTIVGKKALN-PILFRGVGMVADPDNPLVLDILTGSSTSYSFFPDKPITQYPHA 193 Query: 246 TGSAISLVSVMQARNNARVLISGSLDLFSNRF 341 G L++ +QARNNARV+ SGSLD FS+ F Sbjct: 194 VGKNTLLIAGLQARNNARVVFSGSLDFFSDAF 225
>OST48_HUMAN (P39656) Dolichyl-diphosphooligosaccharide--protein| glycosyltransferase 48 kDa subunit precursor (EC 2.4.1.119) (Oligosaccharyl transferase 48 kDa subunit) (DDOST 48 kDa subunit) Length = 439 Score = 79.7 bits (195), Expect = 2e-15 Identities = 39/92 (42%), Positives = 59/92 (64%) Frame = +3 Query: 66 DDLIQSDVILGSKKIEAPVLFRGIGHAANPSNSLVLKVLSASPSAYSANPGTKLASVPSL 245 ++L+++ I+G + P+LFRG+G A+P N LVL +L+ S ++YS P + P Sbjct: 161 ENLLKAPTIVGKSSLN-PILFRGVGMVADPDNPLVLDILTGSSTSYSFFPDKPITQYPHA 219 Query: 246 TGSAISLVSVMQARNNARVLISGSLDLFSNRF 341 G L++ +QARNNARV+ SGSLD FS+ F Sbjct: 220 VGKNTLLIAGLQARNNARVIFSGSLDFFSDSF 251
>OST48_MOUSE (O54734) Dolichyl-diphosphooligosaccharide--protein| glycosyltransferase 48 kDa subunit precursor (EC 2.4.1.119) (Oligosaccharyl transferase 48 kDa subunit) (DDOST 48 kDa subunit) Length = 441 Score = 79.3 bits (194), Expect = 2e-15 Identities = 39/92 (42%), Positives = 59/92 (64%) Frame = +3 Query: 66 DDLIQSDVILGSKKIEAPVLFRGIGHAANPSNSLVLKVLSASPSAYSANPGTKLASVPSL 245 ++L+++ I+G + P+LFRG+G A+P N LVL +L+ S ++YS P + P Sbjct: 163 ENLLKAPTIVGKSSLN-PILFRGVGMVADPDNPLVLDILTGSSTSYSFFPDKPITQYPHA 221 Query: 246 TGSAISLVSVMQARNNARVLISGSLDLFSNRF 341 G L++ +QARNNARV+ SGSLD FS+ F Sbjct: 222 VGRNTLLIAGLQARNNARVIFSGSLDFFSDAF 253
>OST48_CANFA (Q05052) Dolichyl-diphosphooligosaccharide--protein| glycosyltransferase 48 kDa subunit precursor (EC 2.4.1.119) (Oligosaccharyl transferase 48 kDa subunit) Length = 445 Score = 79.0 bits (193), Expect = 3e-15 Identities = 39/92 (42%), Positives = 59/92 (64%) Frame = +3 Query: 66 DDLIQSDVILGSKKIEAPVLFRGIGHAANPSNSLVLKVLSASPSAYSANPGTKLASVPSL 245 ++L+++ I+G + P+LFRG+G A+P N LVL +L+ S ++YS P + P Sbjct: 167 ENLLKAPTIVGRSSLN-PILFRGVGMVADPDNPLVLDILTGSSTSYSFFPDKPITQYPHA 225 Query: 246 TGSAISLVSVMQARNNARVLISGSLDLFSNRF 341 G L++ +QARNNARV+ SGSLD FS+ F Sbjct: 226 VGKNTLLIAGLQARNNARVVFSGSLDFFSDAF 257
>OST48_DROME (Q24319) Dolichyl-diphosphooligosaccharide--protein| glycosyltransferase 48 kDa subunit precursor (EC 2.4.1.119) (Oligosaccharyl transferase 48 kDa subunit) (DDOST 48 kDa subunit) (OST5OP) (DrOST) (DmOST50) Length = 449 Score = 77.8 bits (190), Expect = 6e-15 Identities = 42/92 (45%), Positives = 59/92 (64%), Gaps = 3/92 (3%) Frame = +3 Query: 69 DLIQSDVILGSKKIEA---PVLFRGIGHAANPSNSLVLKVLSASPSAYSANPGTKLASVP 239 +LIQ+D I+G +A P+L+RG G A+ N LVLK+L+A +AYS NP ++ P Sbjct: 158 NLIQADTIVGKANRQADAAPLLYRGTGLIADKENPLVLKLLTAESTAYSYNPEASVSDYP 217 Query: 240 SLTGSAISLVSVMQARNNARVLISGSLDLFSN 335 G L++ +QARNNARV+ SGSL FS+ Sbjct: 218 HAVGRGTLLIAALQARNNARVVFSGSLLFFSD 249
>SSH_DROME (Q6NN85) Protein phosphatase Slingshot (EC 3.1.3.48) (EC 3.1.3.16)| Length = 1045 Score = 31.6 bits (70), Expect = 0.51 Identities = 29/97 (29%), Positives = 43/97 (44%), Gaps = 8/97 (8%) Frame = +3 Query: 57 IAGDDLIQSDVILGSKKIEAPVLFRGIGH-------AANPSNSLVLKVLSASPSAYSANP 215 +A D I +V + + EA G G A + S+S + +SA A SANP Sbjct: 947 LADDQRISGNVQILKQNFEAKAGVVGTGGGGGGGTAAGSGSSSTIATSVSAVAGACSANP 1006 Query: 216 GTKLASVPSLTGSAISL-VSVMQARNNARVLISGSLD 323 G K S SL S ++ + + A +N+ S S D Sbjct: 1007 GKKTTSHQSLPSSPVAQHANHVSAASNSNSSASNSSD 1043
>T240L_MOUSE (Q6JPI3) Thyroid hormone receptor-associated protein 2 (Thyroid| hormone receptor-associated protein complex 240 kDa component-like) Length = 2207 Score = 30.0 bits (66), Expect = 1.5 Identities = 15/37 (40%), Positives = 21/37 (56%) Frame = +3 Query: 138 GHAANPSNSLVLKVLSASPSAYSANPGTKLASVPSLT 248 G A NP++S ++S SA S PG+ AS P +T Sbjct: 1559 GSAFNPTSSSSANPTTSSSSASSGPPGSSAASAPGIT 1595
>EBNA4_EBV (P03203) Epstein-Barr nuclear antigen 4 (EBV nuclear antigen 4)| (EBNA-4) (EBNA-3B) Length = 938 Score = 28.9 bits (63), Expect = 3.3 Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%) Frame = -1 Query: 207 LNTPTARQIEPSKPSC-WMDWPHVQSLETIQEP 112 L +PT Q+ S PSC WP VQ +T +P Sbjct: 577 LTSPTTSQLSSSAPSCAQTPWPVVQPSQTPDDP 609
>ELF4_MOUSE (Q9Z2U4) ETS-related transcription factor Elf-4 (E74-like factor 4)| (Myeloid Elf-1-like factor) Length = 655 Score = 28.1 bits (61), Expect = 5.6 Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 1/63 (1%) Frame = +3 Query: 117 PVLFRGIGHAANPSNSLVLKVLSASPSAYSANPGTKLAS-VPSLTGSAISLVSVMQARNN 293 P L G NP+ S V+ SA PS S PGT +A+ + + +G+++ +V R++ Sbjct: 486 PQLLAGANPQTNPAPSQVIGAGSAGPS--SQPPGTVIAAFIRTSSGTSVPVVKEGPLRSS 543 Query: 294 ARV 302 + V Sbjct: 544 SYV 546
>GLK_XANAC (Q8PKU2) Glucokinase (EC 2.7.1.2) (Glucose kinase)| Length = 335 Score = 28.1 bits (61), Expect = 5.6 Identities = 13/38 (34%), Positives = 20/38 (52%) Frame = -2 Query: 134 PSKQYRSLNLFGPQYHI*LNQIIASNXRCDPLQTQWRH 21 P Q R+ + GP + + +I N RC PL+T+ H Sbjct: 134 PIDQARNYGVIGPGTGLGVGGLIIRNGRCFPLETEGGH 171
>EDNRA_SHEEP (Q95L55) Endothelin-1 receptor precursor (Endothelin A receptor)| (ET-A) Length = 427 Score = 28.1 bits (61), Expect = 5.6 Identities = 16/53 (30%), Positives = 27/53 (50%) Frame = +3 Query: 162 SLVLKVLSASPSAYSANPGTKLASVPSLTGSAISLVSVMQARNNARVLISGSL 320 +LV V+S +P +YS N + SV + G+ +S V N + +GS+ Sbjct: 13 ALVGGVISDNPESYSTNLSIHVDSVTTFRGTELSFVVTTHQPTNLALPSNGSM 65
>CDC5L_RAT (O08837) Cell division cycle 5-related protein (Cdc5-like protein)| (Pombe Cdc5-related protein) Length = 802 Score = 28.1 bits (61), Expect = 5.6 Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 4/56 (7%) Frame = -3 Query: 277 ITETSDMADPVRDGTDANLVPGFAEYAD----GEADRTFKTKLLDGLAACPIPRNN 122 +T + P+RD + N G A+Y+D + +R + L GL P P+N+ Sbjct: 434 VTNATPGRTPLRDKLNINPEDGMADYSDPSYVKQMERESREHLRLGLLGLPAPKND 489
>CDC5L_MOUSE (Q6A068) Cell division cycle 5-related protein (Cdc5-like protein)| Length = 802 Score = 28.1 bits (61), Expect = 5.6 Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 4/56 (7%) Frame = -3 Query: 277 ITETSDMADPVRDGTDANLVPGFAEYAD----GEADRTFKTKLLDGLAACPIPRNN 122 +T + P+RD + N G A+Y+D + +R + L GL P P+N+ Sbjct: 434 VTNATPGRTPLRDKLNINPEDGMADYSDPSYVKQMERESREHLRLGLLGLPAPKND 489
>GEI8_CAEEL (P34333) Gex-3-interacting protein 8| Length = 1780 Score = 28.1 bits (61), Expect = 5.6 Identities = 12/28 (42%), Positives = 20/28 (71%) Frame = +3 Query: 147 ANPSNSLVLKVLSASPSAYSANPGTKLA 230 A PS+ +V K++S+S +A +ANP K + Sbjct: 1478 APPSDRIVTKLISSSEAAAAANPSAKFS 1505
>SYI_MYCTU (Q10765) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA| ligase) (IleRS) Length = 1041 Score = 28.1 bits (61), Expect = 5.6 Identities = 11/36 (30%), Positives = 20/36 (55%) Frame = +1 Query: 160 TAWF*RFYLPRRRRIQQTQGLSWHPFHLSQGRPYHW 267 ++WF R R R ++ Q ++W+P H+ G+ W Sbjct: 427 SSWFVRVTDFRDRMVELNQQITWYPEHVKDGQFGKW 462
>SYI_MYCBO (Q7VEZ0) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA| ligase) (IleRS) Length = 1041 Score = 28.1 bits (61), Expect = 5.6 Identities = 11/36 (30%), Positives = 20/36 (55%) Frame = +1 Query: 160 TAWF*RFYLPRRRRIQQTQGLSWHPFHLSQGRPYHW 267 ++WF R R R ++ Q ++W+P H+ G+ W Sbjct: 427 SSWFVRVTDFRDRMVELNQQITWYPEHVKDGQFGKW 462
>DAPA_PYRHO (O58577) Dihydrodipicolinate synthase (EC 4.2.1.52) (DHDPS)| Length = 287 Score = 28.1 bits (61), Expect = 5.6 Identities = 23/79 (29%), Positives = 41/79 (51%) Frame = +3 Query: 66 DDLIQSDVILGSKKIEAPVLFRGIGHAANPSNSLVLKVLSASPSAYSANPGTKLASVPSL 245 +D I + ++K++ P++ I ANP + V++ L+ YS G K ASV SL Sbjct: 109 EDAIFKHFSMVAEKVDIPIILYAIPSCANPISLEVVRKLALE---YSNVIGVK-ASVDSL 164 Query: 246 TGSAISLVSVMQARNNARV 302 T + L+ + + R + +V Sbjct: 165 TYLS-GLIEIKEERKDFKV 182
>EDNRA_BOVIN (P21450) Endothelin-1 receptor precursor (Endothelin A receptor)| (ET-A) Length = 427 Score = 27.7 bits (60), Expect = 7.3 Identities = 16/53 (30%), Positives = 27/53 (50%) Frame = +3 Query: 162 SLVLKVLSASPSAYSANPGTKLASVPSLTGSAISLVSVMQARNNARVLISGSL 320 +LV V+S +P +YS N + SV + G+ +S V N + +GS+ Sbjct: 13 ALVGGVISDNPESYSTNLSIHVDSVATFHGTELSFVVTTHQPTNLALPSNGSM 65
>SYI_DEHSC (Q3ZY20) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA| ligase) (IleRS) Length = 1014 Score = 27.7 bits (60), Expect = 7.3 Identities = 11/35 (31%), Positives = 18/35 (51%) Frame = +1 Query: 163 AWF*RFYLPRRRRIQQTQGLSWHPFHLSQGRPYHW 267 +W+ R R I+ Q ++W+P H+ GR W Sbjct: 435 SWYIRTTAVRDELIKGNQQINWYPEHIKDGRFGDW 469
>SYI_DEHE1 (Q3Z7P5) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA| ligase) (IleRS) Length = 1014 Score = 27.7 bits (60), Expect = 7.3 Identities = 11/35 (31%), Positives = 18/35 (51%) Frame = +1 Query: 163 AWF*RFYLPRRRRIQQTQGLSWHPFHLSQGRPYHW 267 +W+ R R I+ Q ++W+P H+ GR W Sbjct: 435 SWYIRTTAVRDELIKGNQQINWYPEHIKDGRFGDW 469
>FIBP_ADEP3 (Q83457) Fiber protein (pIV)| Length = 448 Score = 27.7 bits (60), Expect = 7.3 Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 5/67 (7%) Frame = +3 Query: 120 VLFRGIGHAANPSNSLVLKV-----LSASPSAYSANPGTKLASVPSLTGSAISLVSVMQA 284 V G G NP LVLKV L+A + S PG S TG ++ + + +Q Sbjct: 78 VATEGSGLTTNPDGKLVLKVKSPITLTAEGISLSLGPGLS----NSETGLSLQVTAPLQF 133 Query: 285 RNNARVL 305 + NA L Sbjct: 134 QGNALTL 140
>BAZ1A_HUMAN (Q9NRL2) Bromodomain adjacent to zinc finger domain protein 1A| (ATP-utilizing chromatin assembly and remodeling factor 1) (hACF1) (ATP-dependent chromatin remodelling protein) (Williams syndrome transcription factor-related chromatin remodeli Length = 1556 Score = 27.7 bits (60), Expect = 7.3 Identities = 16/39 (41%), Positives = 23/39 (58%) Frame = +3 Query: 156 SNSLVLKVLSASPSAYSANPGTKLASVPSLTGSAISLVS 272 SN ++K LS S S Y PG K+ + +L G ++LVS Sbjct: 592 SNPSLVKKLS-STSVYDLTPGEKMKILHALCGKLLTLVS 629
>VRP1_YEAST (P37370) Verprolin| Length = 817 Score = 27.7 bits (60), Expect = 7.3 Identities = 25/80 (31%), Positives = 34/80 (42%), Gaps = 7/80 (8%) Frame = +3 Query: 24 PPLSLKGITPXIAGDDLI--QSDVILGSKKIEAPVLFRGIGHAANPSNSLVL-----KVL 182 PP TP +GDD +S+ +LG KK +AP L GH P VL + Sbjct: 575 PPPITSLPTPTASGDDHTNDKSETVLGMKKAKAPAL---PGHVPPPPVPPVLSDDSKNNV 631 Query: 183 SASPSAYSANPGTKLASVPS 242 A+ + P + L PS Sbjct: 632 PAASLLHDVLPSSNLEKPPS 651
>RGL2_MOUSE (Q61193) Ral guanine nucleotide dissociation stimulator-like 2| (RalGDS-like factor) (RAS-associated protein RAB2L) Length = 778 Score = 27.3 bits (59), Expect = 9.6 Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 2/64 (3%) Frame = +3 Query: 33 SLKGITPXIAGD-DLIQSDVILGSKKIEAPVLFRGIGHAANPSNSLVLKVLSASPSAYS- 206 S+ G TP ++ D + D + G+ AP+L R H PS S + L +SPS +S Sbjct: 539 SVGGPTPLVSWDRPSVGGDEVPGTP---APLLTRLAQHMKWPSVSSLDSALESSPSLHSP 595 Query: 207 ANPG 218 A+PG Sbjct: 596 ADPG 599
>ABC1_SCHPO (Q92337) ATP-binding cassette transporter abc1| Length = 1427 Score = 27.3 bits (59), Expect = 9.6 Identities = 19/71 (26%), Positives = 30/71 (42%), Gaps = 1/71 (1%) Frame = -3 Query: 253 DPVR-DGTDANLVPGFAEYADGEADRTFKTKLLDGLAACPIPRNNTGASIFLDPNITSD* 77 DPV GT + + F EY DGE + KT + L + +I LD + S Sbjct: 1263 DPVLISGTVRSNLDPFEEYGDGELNEILKTASCESLVQASNKNSLDAFAIHLDTPVDSGG 1322 Query: 76 IRSSPAXQGVI 44 + S + ++ Sbjct: 1323 VNFSSGQRQIL 1333
>BT1A1_MOUSE (Q62556) Butyrophilin subfamily 1 member A1 precursor (BT)| Length = 524 Score = 27.3 bits (59), Expect = 9.6 Identities = 11/31 (35%), Positives = 16/31 (51%) Frame = -1 Query: 192 ARQIEPSKPSCWMDWPHVQSLETIQEPQSFW 100 +RQI P +P + WP V ET + +W Sbjct: 331 SRQILPDRPERFDSWPCVLGRETFTSGRHYW 361 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 53,544,898 Number of Sequences: 219361 Number of extensions: 1084951 Number of successful extensions: 2947 Number of sequences better than 10.0: 27 Number of HSP's better than 10.0 without gapping: 2886 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2947 length of database: 80,573,946 effective HSP length: 90 effective length of database: 60,831,456 effective search space used: 1459954944 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)