ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags12n02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_477102.1| Oryza sativa (japonica cultivar-group), mRNA 297 1e-77
2ref|XM_506221.1| PREDICTED Oryza sativa (japonica cultivar-group... 297 1e-77
3dbj|AK099319.1| Oryza sativa (japonica cultivar-group) cDNA clon... 297 1e-77
4dbj|AK059111.1| Oryza sativa (japonica cultivar-group) cDNA clon... 297 1e-77
5gb|AY103792.1| Zea mays PCO149739 mRNA sequence 218 9e-54
6gb|BT017639.1| Zea mays clone EL01N0438G02.c mRNA sequence 214 1e-52
7gb|BT017987.1| Zea mays clone EL01N0525H08.c mRNA sequence 208 9e-51
8gb|BT016706.1| Zea mays clone Contig539 mRNA sequence 194 1e-46
9dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 107 2e-20
10dbj|AP003748.4| Oryza sativa (japonica cultivar-group) genomic D... 107 2e-20
11gb|AY175374.1| Branchiostoma belcheri tsingtaunese dolichyl-diph... 48 0.019
12gb|AF541963.1| Glycine max cv Williams 82 BAC clone Gm_ISb001_09... 42 1.2
13gb|AC114666.31| Mus musculus chromosome 5, clone RP24-175N6, com... 40 4.6
14gb|BC104674.1| Rattus norvegicus hydrocephalus-inducing protein,... 40 4.6
15gb|AC147206.2| Xenopus tropicalis clone CH216-39C21, complete se... 40 4.6
16gb|AC147170.3| Xenopus tropicalis clone CH216-154J22, complete s... 40 4.6
17gb|AC127019.29| Medicago truncatula clone mth2-31b1, complete se... 40 4.6
18gb|AC153928.5| Mus musculus 6 BAC RP23-66O20 (Roswell Park Cance... 40 4.6
19gb|AC108476.5| Homo sapiens BAC clone RP11-1413K20 from 2, compl... 40 4.6
20ref|XM_226468.3| PREDICTED: Rattus norvegicus hydrocephalus-indu... 40 4.6
21gb|AC153612.6| Mus musculus 6 BAC RP23-435I4 (Roswell Park Cance... 40 4.6
22gb|BC091376.1| Rattus norvegicus hydrocephalus-inducing protein,... 40 4.6
23gb|AC131693.5| Mus musculus BAC clone RP23-391D10 from 14, compl... 40 4.6
24gb|AC166328.4| Mus musculus BAC clone RP23-31H5 from chromosome ... 40 4.6

>ref|XM_477102.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1570

 Score =  297 bits (150), Expect = 1e-77
 Identities = 295/342 (86%), Gaps = 1/342 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   ggttattgaccacattaattatgcctccactgagtctgaaggggatcacaccttgnattg 60
           ||||||||| ||||||||||||||  |||||||  ||||||| ||||| || ||| ||||
Sbjct: 474 ggttattgatcacattaattatgctgccactgatgctgaaggtgatcatactttg-attg 532

                                                                       
Query: 61  ctggcgatgatctgattcagtcagatgtgatattggggtccaaaaagattgaggctcctg 120
           |||| ||||| || || ||||||||||||||| ||||||| || || |||||||| ||||
Sbjct: 533 ctggtgatgacctcatccagtcagatgtgatactggggtcaaagaaaattgaggcccctg 592

                                                                       
Query: 121 tattgtttcgagggattggacatgcggccaatccatccaacagcttggttttgaaggttc 180
           |||| ||||| || |||||||||||||  |||||||| |||||||||||  |||| ||  
Sbjct: 593 tattatttcggggaattggacatgcggttaatccatctaacagcttggtcctgaaagtct 652

                                                                       
Query: 181 tatctgcctcgccgtcggcgtattcagcaaacccagggactaagttggcatccgttccat 240
           |||| ||||| ||||| || || ||||||||||||  | |||||||||| |||  |||||
Sbjct: 653 tatccgcctctccgtcagcatactcagcaaacccaaagtctaagttggcttcccctccat 712

                                                                       
Query: 241 ctctcacagggtcggccatatcactggtttctgttatgcaggctaggaacaatgctcgtg 300
           |||||||||||||||| |||||||||||||||||||||||||| || ||||||||||| |
Sbjct: 713 ctctcacagggtcggctatatcactggtttctgttatgcaggcaagaaacaatgctcggg 772

                                                     
Query: 301 tgttgatatctggatcactggatttgtttagcaacaggttcc 342
           | ||||||||||||||||| ||| ||||||||||||||||||
Sbjct: 773 tcttgatatctggatcactcgatctgtttagcaacaggttcc 814



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>ref|XM_506221.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1136_A05.4 mRNA
          Length = 1648

 Score =  297 bits (150), Expect = 1e-77
 Identities = 295/342 (86%), Gaps = 1/342 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   ggttattgaccacattaattatgcctccactgagtctgaaggggatcacaccttgnattg 60
           ||||||||| ||||||||||||||  |||||||  ||||||| ||||| || ||| ||||
Sbjct: 481 ggttattgatcacattaattatgctgccactgatgctgaaggtgatcatactttg-attg 539

                                                                       
Query: 61  ctggcgatgatctgattcagtcagatgtgatattggggtccaaaaagattgaggctcctg 120
           |||| ||||| || || ||||||||||||||| ||||||| || || |||||||| ||||
Sbjct: 540 ctggtgatgacctcatccagtcagatgtgatactggggtcaaagaaaattgaggcccctg 599

                                                                       
Query: 121 tattgtttcgagggattggacatgcggccaatccatccaacagcttggttttgaaggttc 180
           |||| ||||| || |||||||||||||  |||||||| |||||||||||  |||| ||  
Sbjct: 600 tattatttcggggaattggacatgcggttaatccatctaacagcttggtcctgaaagtct 659

                                                                       
Query: 181 tatctgcctcgccgtcggcgtattcagcaaacccagggactaagttggcatccgttccat 240
           |||| ||||| ||||| || || ||||||||||||  | |||||||||| |||  |||||
Sbjct: 660 tatccgcctctccgtcagcatactcagcaaacccaaagtctaagttggcttcccctccat 719

                                                                       
Query: 241 ctctcacagggtcggccatatcactggtttctgttatgcaggctaggaacaatgctcgtg 300
           |||||||||||||||| |||||||||||||||||||||||||| || ||||||||||| |
Sbjct: 720 ctctcacagggtcggctatatcactggtttctgttatgcaggcaagaaacaatgctcggg 779

                                                     
Query: 301 tgttgatatctggatcactggatttgtttagcaacaggttcc 342
           | ||||||||||||||||| ||| ||||||||||||||||||
Sbjct: 780 tcttgatatctggatcactcgatctgtttagcaacaggttcc 821



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>dbj|AK099319.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033003F07, full
           insert sequence
          Length = 1570

 Score =  297 bits (150), Expect = 1e-77
 Identities = 295/342 (86%), Gaps = 1/342 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   ggttattgaccacattaattatgcctccactgagtctgaaggggatcacaccttgnattg 60
           ||||||||| ||||||||||||||  |||||||  ||||||| ||||| || ||| ||||
Sbjct: 474 ggttattgatcacattaattatgctgccactgatgctgaaggtgatcatactttg-attg 532

                                                                       
Query: 61  ctggcgatgatctgattcagtcagatgtgatattggggtccaaaaagattgaggctcctg 120
           |||| ||||| || || ||||||||||||||| ||||||| || || |||||||| ||||
Sbjct: 533 ctggtgatgacctcatccagtcagatgtgatactggggtcaaagaaaattgaggcccctg 592

                                                                       
Query: 121 tattgtttcgagggattggacatgcggccaatccatccaacagcttggttttgaaggttc 180
           |||| ||||| || |||||||||||||  |||||||| |||||||||||  |||| ||  
Sbjct: 593 tattatttcggggaattggacatgcggttaatccatctaacagcttggtcctgaaagtct 652

                                                                       
Query: 181 tatctgcctcgccgtcggcgtattcagcaaacccagggactaagttggcatccgttccat 240
           |||| ||||| ||||| || || ||||||||||||  | |||||||||| |||  |||||
Sbjct: 653 tatccgcctctccgtcagcatactcagcaaacccaaagtctaagttggcttcccctccat 712

                                                                       
Query: 241 ctctcacagggtcggccatatcactggtttctgttatgcaggctaggaacaatgctcgtg 300
           |||||||||||||||| |||||||||||||||||||||||||| || ||||||||||| |
Sbjct: 713 ctctcacagggtcggctatatcactggtttctgttatgcaggcaagaaacaatgctcggg 772

                                                     
Query: 301 tgttgatatctggatcactggatttgtttagcaacaggttcc 342
           | ||||||||||||||||| ||| ||||||||||||||||||
Sbjct: 773 tcttgatatctggatcactcgatctgtttagcaacaggttcc 814



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>dbj|AK059111.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-E02, full
           insert sequence
          Length = 1648

 Score =  297 bits (150), Expect = 1e-77
 Identities = 295/342 (86%), Gaps = 1/342 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   ggttattgaccacattaattatgcctccactgagtctgaaggggatcacaccttgnattg 60
           ||||||||| ||||||||||||||  |||||||  ||||||| ||||| || ||| ||||
Sbjct: 481 ggttattgatcacattaattatgctgccactgatgctgaaggtgatcatactttg-attg 539

                                                                       
Query: 61  ctggcgatgatctgattcagtcagatgtgatattggggtccaaaaagattgaggctcctg 120
           |||| ||||| || || ||||||||||||||| ||||||| || || |||||||| ||||
Sbjct: 540 ctggtgatgacctcatccagtcagatgtgatactggggtcaaagaaaattgaggcccctg 599

                                                                       
Query: 121 tattgtttcgagggattggacatgcggccaatccatccaacagcttggttttgaaggttc 180
           |||| ||||| || |||||||||||||  |||||||| |||||||||||  |||| ||  
Sbjct: 600 tattatttcggggtattggacatgcggttaatccatctaacagcttggtcctgaaagtct 659

                                                                       
Query: 181 tatctgcctcgccgtcggcgtattcagcaaacccagggactaagttggcatccgttccat 240
           |||| ||||| ||||| || || ||||||||||||  | |||||||||| |||  |||||
Sbjct: 660 tatccgcctctccgtcagcatactcagcaaacccaaagtctaagttggcttcccctccat 719

                                                                       
Query: 241 ctctcacagggtcggccatatcactggtttctgttatgcaggctaggaacaatgctcgtg 300
           |||||||||||||||| |||||||||||||||||||||||||| || ||||||||||| |
Sbjct: 720 ctctcacagggtcggctatatcactggtttctgttatgcaggcaagaaacaatgctcggg 779

                                                     
Query: 301 tgttgatatctggatcactggatttgtttagcaacaggttcc 342
           | ||||||||||||||||| ||| ||||||||||||||||||
Sbjct: 780 tcttgatatctggatcactcgatctgtttagcaacaggttcc 821



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>gb|AY103792.1| Zea mays PCO149739 mRNA sequence
          Length = 2093

 Score =  218 bits (110), Expect = 9e-54
 Identities = 258/306 (84%), Gaps = 1/306 (0%)
 Strand = Plus / Plus

                                                                        
Query: 37   tgaaggggatcacaccttgnattgctggcgatgatctgattcagtcagatgtgatattgg 96
            |||||| |||||||||||| |||||||| |||||||| || || || ||||||||| | |
Sbjct: 832  tgaaggtgatcacaccttg-attgctggtgatgatcttatccattcggatgtgatactag 890

                                                                        
Query: 97   ggtccaaaaagattgaggctcctgtattgtttcgagggattggacatgcggccaatccat 156
            ||||  ||||||||||||||||||||||||||||||| ||||||||   ||| |||||||
Sbjct: 891  ggtctgaaaagattgaggctcctgtattgtttcgaggaattggacacatggctaatccat 950

                                                                        
Query: 157  ccaacagcttggttttgaaggttctatctgcctcgccgtcggcgtattcagcaaacccag 216
            | ||||| |||||| ||||||||||||| ||||| || || || |||||||| || ||| 
Sbjct: 951  caaacagtttggttctgaaggttctatcagcctctccatcagcatattcagctaatccaa 1010

                                                                        
Query: 217  ggactaagttggcatccgttccatctctcacagggtcggccatatcactggtttctgtta 276
             ||||||||| || ||   |||||| ||||| ||||| || |||||| ||||||| ||||
Sbjct: 1011 agactaagttagcgtctcctccatcgctcactgggtcagctatatcattggtttcggtta 1070

                                                                        
Query: 277  tgcaggctaggaacaatgctcgtgtgttgatatctggatcactggatttgtttagcaaca 336
            ||||||| || || |||||||| ||| || ||||||||||||| ||| ||||||||||| 
Sbjct: 1071 tgcaggcaagaaataatgctcgggtgctgctatctggatcactcgatctgtttagcaacc 1130

                  
Query: 337  ggttcc 342
            ||||||
Sbjct: 1131 ggttcc 1136



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>gb|BT017639.1| Zea mays clone EL01N0438G02.c mRNA sequence
          Length = 1151

 Score =  214 bits (108), Expect = 1e-52
 Identities = 250/296 (84%), Gaps = 1/296 (0%)
 Strand = Plus / Plus

                                                                       
Query: 47  cacaccttgnattgctggcgatgatctgattcagtcagatgtgatattggggtccaaaaa 106
           ||||||||| |||||||| |||||||| || || || ||||||||| |||||||  ||||
Sbjct: 1   cacaccttg-attgctggtgatgatcttatccattcggatgtgatactggggtctgaaaa 59

                                                                       
Query: 107 gattgaggctcctgtattgtttcgagggattggacatgcggccaatccatccaacagctt 166
           ||||||||||||||||||||||||||| ||||||||   ||| |||||||| ||||| ||
Sbjct: 60  gattgaggctcctgtattgtttcgaggaattggacacatggctaatccatcaaacagttt 119

                                                                       
Query: 167 ggttttgaaggttctatctgcctcgccgtcggcgtattcagcaaacccagggactaagtt 226
           |||| ||||||||||||| ||||| || || || |||||||| || |||  |||||||||
Sbjct: 120 ggttctgaaggttctatcagcctctccatcagcatattcagctaatccaaagactaagtt 179

                                                                       
Query: 227 ggcatccgttccatctctcacagggtcggccatatcactggtttctgttatgcaggctag 286
            || ||   |||||| ||||| ||||| || |||||| ||||||| ||||||||||| ||
Sbjct: 180 agcgtctcctccatcgctcactgggtcagctatatcattggtttcggttatgcaggcaag 239

                                                                   
Query: 287 gaacaatgctcgtgtgttgatatctggatcactggatttgtttagcaacaggttcc 342
            || |||||||| ||| || ||||||||||||| ||| ||||||||||| ||||||
Sbjct: 240 aaataatgctcgggtgctgctatctggatcactcgatctgtttagcaaccggttcc 295



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>gb|BT017987.1| Zea mays clone EL01N0525H08.c mRNA sequence
          Length = 1602

 Score =  208 bits (105), Expect = 9e-51
 Identities = 247/293 (84%), Gaps = 1/293 (0%)
 Strand = Plus / Plus

                                                                       
Query: 37  tgaaggggatcacaccttgnattgctggcgatgatctgattcagtcagatgtgatattgg 96
           |||||| |||||||||||| |||||||| |||||||| || || || ||||||||| |||
Sbjct: 477 tgaaggtgatcacaccttg-attgctggtgatgatcttatccattcggatgtgatactgg 535

                                                                       
Query: 97  ggtccaaaaagattgaggctcctgtattgtttcgagggattggacatgcggccaatccat 156
           ||||  ||||||||||||||||||||||||||||||| ||||||||   ||| |||||||
Sbjct: 536 ggtctgaaaagattgaggctcctgtattgtttcgaggaattggacacatggctaatccat 595

                                                                       
Query: 157 ccaacagcttggttttgaaggttctatctgcctcgccgtcggcgtattcagcaaacccag 216
           | ||||| |||||| ||||||||||||| ||||| || || || |||||||| || ||| 
Sbjct: 596 caaacagtttggttctgaaggttctatcagcctctccatcagcatattcagctaatccaa 655

                                                                       
Query: 217 ggactaagttggcatccgttccatctctcacagggtcggccatatcactggtttctgtta 276
            ||||||||| || ||   |||||| ||||| ||||| || |||||| ||||||| ||||
Sbjct: 656 agactaagttagcgtctcctccatcgctcactgggtcagctatatcattggtttcggtta 715

                                                                
Query: 277 tgcaggctaggaacaatgctcgtgtgttgatatctggatcactggatttgttt 329
           ||||||| || || |||||||| ||| || ||||||||||||| ||| |||||
Sbjct: 716 tgcaggcaagaaataatgctcgggtgctgctatctggatcactcgatctgttt 768



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>gb|BT016706.1| Zea mays clone Contig539 mRNA sequence
          Length = 936

 Score =  194 bits (98), Expect = 1e-46
 Identities = 282/342 (82%), Gaps = 1/342 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   ggttattgaccacattaattatgcctccactgagtctgaaggggatcacaccttgnattg 60
           |||||||||||||||||| |||||| | |  ||   |||||| |||||||||||| ||||
Sbjct: 579 ggttattgaccacattaactatgccactatggatgttgaaggcgatcacaccttg-attg 637

                                                                       
Query: 61  ctggcgatgatctgattcagtcagatgtgatattggggtccaaaaagattgaggctcctg 120
            ||| |||||||| |||||||||||||| ||| ||||||| |||||||| ||||||||||
Sbjct: 638 ttggtgatgatcttattcagtcagatgtcatactggggtctaaaaagatcgaggctcctg 697

                                                                       
Query: 121 tattgtttcgagggattggacatgcggccaatccatccaacagcttggttttgaaggttc 180
           |||| ||||| || ||||||||  |||| |||||||| ||||| |||||| |||| || |
Sbjct: 698 tattatttcgtggaattggacacacggctaatccatcaaacagtttggttatgaaagtcc 757

                                                                       
Query: 181 tatctgcctcgccgtcggcgtattcagcaaacccagggactaagttggcatccgttccat 240
           |||||||||| || || || || ||||| ||||||  |||||||||  | |    |||||
Sbjct: 758 tatctgcctctccatcagcatactcagctaacccaaagactaagttatcgttgcctccat 817

                                                                       
Query: 241 ctctcacagggtcggccatatcactggtttctgttatgcaggctaggaacaatgctcgtg 300
           | || || ||||| || |||||| ||||||| ||||||||||| || || |||||||| |
Sbjct: 818 cgcttactgggtcagctatatcattggtttcggttatgcaggcaagaaataatgctcggg 877

                                                     
Query: 301 tgttgatatctggatcactggatttgtttagcaacaggttcc 342
           || || ||||||||||||| ||| | ||||||||| ||||||
Sbjct: 878 tgctgctatctggatcacttgatctttttagcaaccggttcc 919



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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score =  107 bits (54), Expect = 2e-20
 Identities = 90/102 (88%)
 Strand = Plus / Plus

                                                                           
Query: 181     tatctgcctcgccgtcggcgtattcagcaaacccagggactaagttggcatccgttccat 240
               |||| ||||| ||||| || || ||||||||||||  | |||||||||| |||  |||||
Sbjct: 5919357 tatccgcctctccgtcagcatactcagcaaacccaaagtctaagttggcttcccctccat 5919416

                                                         
Query: 241     ctctcacagggtcggccatatcactggtttctgttatgcagg 282
               |||||||||||||||| |||||||||||||||||||||||||
Sbjct: 5919417 ctctcacagggtcggctatatcactggtttctgttatgcagg 5919458



 Score = 83.8 bits (42), Expect = 3e-13
 Identities = 97/114 (85%), Gaps = 1/114 (0%)
 Strand = Plus / Plus

                                                                           
Query: 1       ggttattgaccacattaattatgcctccactgagtctgaaggggatcacaccttgnattg 60
               ||||||||| ||||||||||||||  |||||||  ||||||| ||||| || ||| ||||
Sbjct: 5918631 ggttattgatcacattaattatgctgccactgatgctgaaggtgatcatactttg-attg 5918689

                                                                     
Query: 61      ctggcgatgatctgattcagtcagatgtgatattggggtccaaaaagattgagg 114
               |||| ||||| || || ||||||||||||||| ||||||| || || |||||||
Sbjct: 5918690 ctggtgatgacctcatccagtcagatgtgatactggggtcaaagaaaattgagg 5918743



 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 57/63 (90%)
 Strand = Plus / Plus

                                                                           
Query: 277     tgcaggctaggaacaatgctcgtgtgttgatatctggatcactggatttgtttagcaaca 336
               ||||||| || ||||||||||| || ||||||||||||||||| ||| ||||||||||||
Sbjct: 5919890 tgcaggcaagaaacaatgctcgggtcttgatatctggatcactcgatctgtttagcaaca 5919949

                  
Query: 337     ggt 339
               |||
Sbjct: 5919950 ggt 5919952



 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 51/58 (87%)
 Strand = Plus / Plus

                                                                         
Query: 112     aggctcctgtattgtttcgagggattggacatgcggccaatccatccaacagcttggt 169
               |||| |||||||| ||||| || |||||||||||||  |||||||| |||||||||||
Sbjct: 5919166 aggcccctgtattatttcggggaattggacatgcggttaatccatctaacagcttggt 5919223



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>dbj|AP003748.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1136_A05
          Length = 120823

 Score =  107 bits (54), Expect = 2e-20
 Identities = 90/102 (88%)
 Strand = Plus / Plus

                                                                         
Query: 181   tatctgcctcgccgtcggcgtattcagcaaacccagggactaagttggcatccgttccat 240
             |||| ||||| ||||| || || ||||||||||||  | |||||||||| |||  |||||
Sbjct: 61805 tatccgcctctccgtcagcatactcagcaaacccaaagtctaagttggcttcccctccat 61864

                                                       
Query: 241   ctctcacagggtcggccatatcactggtttctgttatgcagg 282
             |||||||||||||||| |||||||||||||||||||||||||
Sbjct: 61865 ctctcacagggtcggctatatcactggtttctgttatgcagg 61906



 Score = 83.8 bits (42), Expect = 3e-13
 Identities = 97/114 (85%), Gaps = 1/114 (0%)
 Strand = Plus / Plus

                                                                         
Query: 1     ggttattgaccacattaattatgcctccactgagtctgaaggggatcacaccttgnattg 60
             ||||||||| ||||||||||||||  |||||||  ||||||| ||||| || ||| ||||
Sbjct: 61079 ggttattgatcacattaattatgctgccactgatgctgaaggtgatcatactttg-attg 61137

                                                                   
Query: 61    ctggcgatgatctgattcagtcagatgtgatattggggtccaaaaagattgagg 114
             |||| ||||| || || ||||||||||||||| ||||||| || || |||||||
Sbjct: 61138 ctggtgatgacctcatccagtcagatgtgatactggggtcaaagaaaattgagg 61191



 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 57/63 (90%)
 Strand = Plus / Plus

                                                                         
Query: 277   tgcaggctaggaacaatgctcgtgtgttgatatctggatcactggatttgtttagcaaca 336
             ||||||| || ||||||||||| || ||||||||||||||||| ||| ||||||||||||
Sbjct: 62338 tgcaggcaagaaacaatgctcgggtcttgatatctggatcactcgatctgtttagcaaca 62397

                
Query: 337   ggt 339
             |||
Sbjct: 62398 ggt 62400



 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 51/58 (87%)
 Strand = Plus / Plus

                                                                       
Query: 112   aggctcctgtattgtttcgagggattggacatgcggccaatccatccaacagcttggt 169
             |||| |||||||| ||||| || |||||||||||||  |||||||| |||||||||||
Sbjct: 61614 aggcccctgtattatttcggggaattggacatgcggttaatccatctaacagcttggt 61671



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>gb|AY175374.1| Branchiostoma belcheri tsingtaunese
           dolichyl-diphosphooligosaccharide--protein
           glycotransferase mRNA, complete cds
          Length = 1987

 Score = 48.1 bits (24), Expect = 0.019
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 279 caggctaggaacaatgctcgtgtg 302
           ||||||||||||||||||||||||
Sbjct: 682 caggctaggaacaatgctcgtgtg 705



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>gb|AF541963.1| Glycine max cv Williams 82 BAC clone Gm_ISb001_091_F11, complete
             sequence
          Length = 118773

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 82    cagatgtgatattggggtcca 102
             |||||||||||||||||||||
Sbjct: 37624 cagatgtgatattggggtcca 37604



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>gb|AC114666.31| Mus musculus chromosome 5, clone RP24-175N6, complete sequence
          Length = 193158

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 163    gcttggttttgaaggttctatctg 186
              |||||||||| |||||||||||||
Sbjct: 167326 gcttggtttttaaggttctatctg 167303



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>gb|BC104674.1| Rattus norvegicus hydrocephalus-inducing protein, mRNA (cDNA clone
            IMAGE:7304622), partial cds
          Length = 1840

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 35   tctgaaggggatcacacctt 54
            ||||||||||||||||||||
Sbjct: 1588 tctgaaggggatcacacctt 1607



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>gb|AC147206.2| Xenopus tropicalis clone CH216-39C21, complete sequence
          Length = 167795

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 72    ctgattcagtcagatgtgat 91
             ||||||||||||||||||||
Sbjct: 25428 ctgattcagtcagatgtgat 25447



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>gb|AC147170.3| Xenopus tropicalis clone CH216-154J22, complete sequence
          Length = 163973

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 72    ctgattcagtcagatgtgat 91
             ||||||||||||||||||||
Sbjct: 25518 ctgattcagtcagatgtgat 25537



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>gb|AC127019.29| Medicago truncatula clone mth2-31b1, complete sequence
          Length = 122810

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 89    gatattggggtccaaaaaga 108
             ||||||||||||||||||||
Sbjct: 74164 gatattggggtccaaaaaga 74145



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>gb|AC153928.5| Mus musculus 6 BAC RP23-66O20 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 241211

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 204   tcagcaaacccagggactaa 223
             ||||||||||||||||||||
Sbjct: 47658 tcagcaaacccagggactaa 47639



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>gb|AC108476.5| Homo sapiens BAC clone RP11-1413K20 from 2, complete sequence
          Length = 139342

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 158    caacagcttggttttgaagg 177
              ||||||||||||||||||||
Sbjct: 132595 caacagcttggttttgaagg 132576



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>ref|XM_226468.3| PREDICTED: Rattus norvegicus hydrocephalus-inducing protein
             (LOC292017), mRNA
          Length = 17592

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 35    tctgaaggggatcacacctt 54
             ||||||||||||||||||||
Sbjct: 17367 tctgaaggggatcacacctt 17386



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>gb|AC153612.6| Mus musculus 6 BAC RP23-435I4 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 197401

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 204   tcagcaaacccagggactaa 223
             ||||||||||||||||||||
Sbjct: 48509 tcagcaaacccagggactaa 48528



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>gb|BC091376.1| Rattus norvegicus hydrocephalus-inducing protein, mRNA (cDNA clone
            IMAGE:7320438), partial cds
          Length = 2252

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 35   tctgaaggggatcacacctt 54
            ||||||||||||||||||||
Sbjct: 1998 tctgaaggggatcacacctt 2017



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>gb|AC131693.5| Mus musculus BAC clone RP23-391D10 from 14, complete sequence
          Length = 220202

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 259    tatcactggtttctgttatgcagg 282
              |||||||||||| |||||||||||
Sbjct: 180219 tatcactggtttgtgttatgcagg 180196



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>gb|AC166328.4| Mus musculus BAC clone RP23-31H5 from chromosome 5, complete sequence
          Length = 215189

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 163   gcttggttttgaaggttctatctg 186
             |||||||||| |||||||||||||
Sbjct: 34787 gcttggtttttaaggttctatctg 34764


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,503,205
Number of Sequences: 3902068
Number of extensions: 2503205
Number of successful extensions: 43406
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 43344
Number of HSP's gapped (non-prelim): 53
length of query: 345
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 323
effective length of database: 17,147,199,772
effective search space: 5538545526356
effective search space used: 5538545526356
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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