| Clone Name | rbaal9i12 |
|---|---|
| Clone Library Name | barley_pub |
>TL30_ARATH (O49292) Thylakoid lumenal 29.8 kDa protein, chloroplast precursor| Length = 274 Score = 35.4 bits (80), Expect = 0.14 Identities = 39/165 (23%), Positives = 67/165 (40%), Gaps = 6/165 (3%) Frame = -1 Query: 535 YGSGFSIRVPPSFDDVLEPEDFSAAMTYYGDKAKVRAYAARFASPDRSELVSVVIKPSNQ 356 +G G+S +P +F P+D++ D RFASP L SV++ P + Sbjct: 120 HGVGWSPIIPYAFS---VPQDWNEVPVSIADLGGTEI-DLRFASPKEGRL-SVIVAPVLR 174 Query: 355 LKITFLEAKDITELGTLKEASKLFVPG------SAKIYSARTIKVKDQEGIRMYYFYEFG 194 + I +G + F P K+ S+ V + +G R+YY +F Sbjct: 175 FADNLGDDVKIENIGQPAKVINAFGPEVIGENVEGKVLSSN---VAEHDG-RLYY--QFE 228 Query: 193 FDKQHVALMATVDSGKTYIAAATAPETRWETDGVTLRSAAVSMSL 59 + HV + AT + Y+ + T +W+ L+ A S + Sbjct: 229 LEPPHVLITATAAGNRLYLFSVTGNGLQWKRHYKDLKRIASSFRI 273
>PSBP2_ARATH (O49344) Oxygen-evolving enhancer protein 2-2, chloroplast| precursor (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) Length = 265 Score = 34.3 bits (77), Expect = 0.30 Identities = 46/180 (25%), Positives = 80/180 (44%), Gaps = 19/180 (10%) Frame = -1 Query: 538 YYGSGFSIRVPPSFDDVLEPEDFSAAMTYYGDKAKVRAYAARFASPDRSELVSVVIKPSN 359 Y G GF I++P ++ E E Y G +V + F D + VSV+I P++ Sbjct: 100 YTGEGFKIQIPSKWNPSKEIE-------YPG---QVLRFEDNF---DATSNVSVMITPTD 146 Query: 358 QLKITFLEAKD--ITELGTLKEASKLFVPGSAK--------IYSARTIKVKDQE-GIRMY 212 + IT + + ++++ L + +V +A + +A ++ QE G + Y Sbjct: 147 KKSITDYGSPEQFLSQVNYLL-GKQAYVGETASEGGFDANAVATANILETSTQEIGGKEY 205 Query: 211 YFYEF-------GFDKQHVALMATVDSGKTYIAAATAPETRW-ETDGVTLRSAAVSMSLA 56 Y+ +H + ATV+ GK YI A A + RW + + +AA S S+A Sbjct: 206 YYLSVLTRTADGDEGGKHQLITATVNGGKLYICKAQAGDKRWFKGARKFVENAATSFSVA 265
>PSBP_CUCSA (Q9SLQ8) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) (OEC23) Length = 263 Score = 33.9 bits (76), Expect = 0.40 Identities = 39/155 (25%), Positives = 58/155 (37%), Gaps = 11/155 (7%) Frame = -1 Query: 538 YYGSGFSIRVPPSFDDVLEPEDFSAAMTYYGDKAKVRAYAARFASPDRSELVSVVIKPSN 359 Y G GF + +P ++ E E F + Y D + + +P + + P Sbjct: 98 YSGDGFKLSIPSKWNPSKERE-FPGQVLRYEDNFDSNSNLSVIINPTDKKSIKDFGSPEE 156 Query: 358 QL-KITFLEAKDITELGTLKEASKLFVP---GSAKIYSARTIKVKDQEGIRMYYFYEF-- 197 L K+ +L K T E F P +A I A V ++ YYF Sbjct: 157 FLSKVDYLLGKQAYFGKTASEGG--FDPDAVATANILEATASNVNGKD----YYFVSVLT 210 Query: 196 -----GFDKQHVALMATVDSGKTYIAAATAPETRW 107 +H + ATV+ GK YI A A + RW Sbjct: 211 RTADGDEGGKHQLITATVNDGKLYICKAQAGDKRW 245
>PSBP_SINAL (P11594) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) Length = 260 Score = 33.9 bits (76), Expect = 0.40 Identities = 39/172 (22%), Positives = 67/172 (38%), Gaps = 8/172 (4%) Frame = -1 Query: 547 WSQYYGSGFSIRVPPSFDDVLEPEDFSAAMTYYGDKAKVRAYAARFASPDRSELVSVVIK 368 ++ Y G GF ++VP ++ E E + + Y D + +P + ++ Sbjct: 92 FTAYSGDGFQVQVPAKWNPSREVE-YPGQVLRYEDNFDATSNLNVMVTPTDKKSITDYGS 150 Query: 367 PSNQL-KITFLEAKDITELGTLKEASKLFVPGSAKIYSARTIKVKDQEGIRMYYFY---- 203 P L ++ +L K T E F + + ++D G YY Sbjct: 151 PEEFLSQVNYLLGKQAYFGETASEGG--FDNNAVATANILETNIQDVGGKPYYYLSVLTR 208 Query: 202 --EFGFDKQHVALMATVDSGKTYIAAATAPETRW-ETDGVTLRSAAVSMSLA 56 + +H + ATV+ GK YI A A + RW + + AA S S+A Sbjct: 209 TADGDEGGKHQLITATVNGGKLYICKAQAGDKRWFKGANKFVEKAATSFSVA 260
>PSBP1_ARATH (Q42029) Oxygen-evolving enhancer protein 2-1, chloroplast| precursor (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) Length = 263 Score = 33.5 bits (75), Expect = 0.52 Identities = 43/179 (24%), Positives = 79/179 (44%), Gaps = 18/179 (10%) Frame = -1 Query: 538 YYGSGFSIRVPPSFDDVLEPEDFSAAMTYYGDKAKVRAYAARFASPDRSELVSVVIKPSN 359 Y G GF ++VP ++ E E Y G +V + F D + ++V++ P++ Sbjct: 98 YNGDGFKVQVPAKWNPSKEIE-------YPG---QVLRFEDNF---DATSNLNVMVTPTD 144 Query: 358 QLKITFLEAKD--ITELGTLKEASKLFVPGSAK-------IYSARTIKVKDQE-GIRMYY 209 + IT + + ++++ L F +++ + +A ++ QE G + YY Sbjct: 145 KKSITDYGSPEEFLSQVNYLLGKQAYFGETASEGGFDNNAVATANILESSSQEVGGKPYY 204 Query: 208 FYEF-------GFDKQHVALMATVDSGKTYIAAATAPETRW-ETDGVTLRSAAVSMSLA 56 + +H + ATV+ GK YI A A + RW + + SAA S S+A Sbjct: 205 YLSVLTRTADGDEGGKHQLITATVNGGKLYICKAQAGDKRWFKGARKFVESAATSFSVA 263
>PSBP_NARPS (Q40407) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) Length = 265 Score = 33.5 bits (75), Expect = 0.52 Identities = 42/167 (25%), Positives = 64/167 (38%), Gaps = 8/167 (4%) Frame = -1 Query: 532 GSGFSIRVPPSFDDVLEPEDFSAAMTYYGDKAKVRAYAARFASPDRSELVSVVIKPSNQL 353 G GF I +P ++ E E F + Y D + +P + + P L Sbjct: 102 GDGFKILIPSKWNPSKEVE-FPGQVLRYEDNFDTTSNVGVMVNPTDKKSIKDYGSPEQFL 160 Query: 352 -KITFLEAKDITELGTLKEASKLFVPGSAKIY-----SARTIKVKDQEGIRMYYFYEFGF 191 ++ +L K T+ E F P + + S + KD I + G Sbjct: 161 SQVDYLLGKQAYFGKTISEGG--FEPNAVRTANILETSTPVVGGKDYYSIHVLTRTADGD 218 Query: 190 DK-QHVALMATVDSGKTYIAAATAPETRWETDGVT-LRSAAVSMSLA 56 + +H+ + ATV GK YI A A + RW + SAA S S A Sbjct: 219 EGGKHLLITATVSDGKLYICKAQAGDKRWFKGAKKFVESAASSFSAA 265
>PSBP_SOLTU (P93566) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) Length = 260 Score = 33.5 bits (75), Expect = 0.52 Identities = 43/178 (24%), Positives = 66/178 (37%), Gaps = 17/178 (9%) Frame = -1 Query: 538 YYGSGFSIRVPPSFDDVLEPEDFSAAMTYYGDKAKVRAYAARFASPDRSELVSVVIKPSN 359 Y G GF +++P ++ E E F + Y D + +P + ++ P Sbjct: 95 YNGDGFKLQIPAKWNPSKEIE-FPGQVLRYEDNFDSTSNLMVAVTPTDKKSITDYGSPEE 153 Query: 358 QL-KITFLEAKDI---------------TELGTLKEASKLFVPGSAKIYSARTIKVKDQE 227 L K+ +L K L EAS V G Y + + D + Sbjct: 154 FLSKVDYLLGKQAYFGKTDSEGGFESGAVATANLLEASSATVGGKQYYYLSVLTRTADGD 213 Query: 226 GIRMYYFYEFGFDKQHVALMATVDSGKTYIAAATAPETRWETDGVT-LRSAAVSMSLA 56 E G +H + ATV+ GK YI A A + RW + +AA S S+A Sbjct: 214 --------EGG---KHQLITATVNDGKLYICKAQAGDKRWFKGAKKFVENAATSFSIA 260
>PSBP3_TOBAC (Q04127) Oxygen-evolving enhancer protein 2-3, chloroplast| precursor (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane) Length = 266 Score = 33.1 bits (74), Expect = 0.68 Identities = 48/180 (26%), Positives = 71/180 (39%), Gaps = 19/180 (10%) Frame = -1 Query: 538 YYGSGFSIRVPPSFDDVLEPEDFSAAMTYYGDKAKVRAYAARFASPDRSELVSVVIKPSN 359 Y G GF +++P ++ E E Y G +V + F D + V V I P++ Sbjct: 101 YNGDGFKLQIPSKWNPNKEVE-------YPG---QVLRFEDNF---DATSNVIVAITPTD 147 Query: 358 QLKIT-------FLEAKDITELGTLKEASKLFVPG---SAKIYSARTIKVKDQE-GIRMY 212 + IT FL D LG + K G S + A ++ E G + Y Sbjct: 148 KKSITDFGSPEQFLSQVDYL-LGRQAYSGKTDSEGGFESDAVAIANVLETSTAEVGGKQY 206 Query: 211 YFYEF-------GFDKQHVALMATVDSGKTYIAAATAPETRWETDGVT-LRSAAVSMSLA 56 Y+ +H + ATV+ GK YI A A + RW + + A S SLA Sbjct: 207 YYLSILTRTADGNEGGKHQLVTATVNDGKLYICKAQAGDKRWFKGAKKFVENTATSFSLA 266
>PSBP_LYCES (P29795) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) Length = 258 Score = 32.7 bits (73), Expect = 0.88 Identities = 45/178 (25%), Positives = 69/178 (38%), Gaps = 17/178 (9%) Frame = -1 Query: 538 YYGSGFSIRVPPSFDDVLEPEDFSAAMTYYGDKAKVRAYAARFASPDRSELVSVVIKPSN 359 Y G GF ++VP ++ E E + + Y D + +P + ++ P Sbjct: 93 YNGDGFKLQVPAKWNPSKEVE-YPGQVLRYEDNFDSTSNLIVAVTPTDKKSITDYGSPEE 151 Query: 358 QL-KITFLEAKDI------TELG---------TLKEASKLFVPGSAKIYSARTIKVKDQE 227 L K+ +L K +E G L EAS V G Y + + D + Sbjct: 152 FLSKVDYLLGKQAYFGKTDSEGGFESGAVATRNLLEASSATVGGKEYYYLSVLTRTADGD 211 Query: 226 GIRMYYFYEFGFDKQHVALMATVDSGKTYIAAATAPETRWETDGVT-LRSAAVSMSLA 56 E G +H + ATV+ GK YI A A + RW + +AA S S+A Sbjct: 212 --------EGG---KHQLITATVNDGKLYICKAQAGDKRWFKGAKKFVENAATSFSIA 258
>PSBP_FRIAG (O49080) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) Length = 264 Score = 32.7 bits (73), Expect = 0.88 Identities = 38/153 (24%), Positives = 60/153 (39%), Gaps = 9/153 (5%) Frame = -1 Query: 538 YYGSGFSIRVPPSFDDVLEPEDFSAAMTYYGDKAKVRAYAARFASPDRSELVSVVIKPSN 359 Y G GF++ +P ++ E E F + Y D V + + +P + ++ P Sbjct: 99 YTGDGFNLLIPAKWNPSKEVE-FPGQVLRYEDNFDVTSNVSVTVTPTSKKSITDYGTPEE 157 Query: 358 QLK-ITFLEAKDITELGTLKEASKLFVPGSAKIYSARTIKVKDQE-GIRMYYFYEF---- 197 L + +L K T E F P S + +A ++V G + YY Sbjct: 158 FLSTVDYLLGKQAYSGKTASEGG--FDPDS--VATANILEVSTPVVGGKQYYNISVLTRT 213 Query: 196 ---GFDKQHVALMATVDSGKTYIAAATAPETRW 107 +H + ATV GK YI A A + RW Sbjct: 214 ADGDEGGKHHVISATVTDGKLYICKAQAGDKRW 246
>PSBP2_TOBAC (P18212) Oxygen-evolving enhancer protein 2-2, chloroplast| precursor (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane) Length = 265 Score = 32.7 bits (73), Expect = 0.88 Identities = 48/180 (26%), Positives = 71/180 (39%), Gaps = 19/180 (10%) Frame = -1 Query: 538 YYGSGFSIRVPPSFDDVLEPEDFSAAMTYYGDKAKVRAYAARFASPDRSELVSVVIKPSN 359 Y G GF +++P ++ E E Y G +V + F D + V V I P++ Sbjct: 100 YNGDGFKLQIPSKWNPNKEVE-------YPG---QVLRFEDNF---DATSNVIVAITPTD 146 Query: 358 QLKIT-------FLEAKDITELGTLKEASKLFVPG---SAKIYSARTIKVKDQE-GIRMY 212 + IT FL D LG + K G S + A ++ E G + Y Sbjct: 147 KKSITDFGSPEQFLSQVDYL-LGRQAYSGKTDSEGGFESDAVAIANVLETSSAEVGGKPY 205 Query: 211 YFYEF-------GFDKQHVALMATVDSGKTYIAAATAPETRWETDGVT-LRSAAVSMSLA 56 Y+ +H + ATV+ GK YI A A + RW + + A S SLA Sbjct: 206 YYLSVLTRTADGNEGGKHQLITATVNDGKLYICKAQAGDKRWFKGAKKFVENTATSFSLA 265
>TL19_ARATH (P82658) Thylakoid lumenal 19 kDa protein, chloroplast precursor| (P19) Length = 229 Score = 31.6 bits (70), Expect = 2.0 Identities = 19/66 (28%), Positives = 28/66 (42%) Frame = -1 Query: 283 VPGSAKIYSARTIKVKDQEGIRMYYFYEFGFDKQHVALMATVDSGKTYIAAATAPETRWE 104 + G+ K+ S KD+ G ++YY YE +H + T + Y AP W Sbjct: 155 IAGADKVVSEER---KDETG-QVYYLYEIDGVGKHSLITVTCSKNRLYAHFVNAPAPEWN 210 Query: 103 TDGVTL 86 D TL Sbjct: 211 RDHDTL 216
>PSBP_SPIOL (P12302) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) Length = 267 Score = 31.2 bits (69), Expect = 2.6 Identities = 36/160 (22%), Positives = 59/160 (36%), Gaps = 16/160 (10%) Frame = -1 Query: 538 YYGSGFSIRVPPSFDDVLEPEDFSAAMTYYGDKAKVRAYAARFASPDRSELVSVVIKPSN 359 Y G GF + VP ++ E E F + Y D + + P + ++ P + Sbjct: 102 YNGDGFKLLVPSKWNPSKEKE-FPGQVLRYEDNFDATSNLSVLVQPTDKKSITDFGSPED 160 Query: 358 QL-KITFLEAKD---------------ITELGTLKEASKLFVPGSAKIYSARTIKVKDQE 227 L ++ +L K + + E+S V G K Y + T+ + + Sbjct: 161 FLSQVDYLLGKQAYFGKTDSEGGFDSGVVASANVLESSTPVVDG--KQYYSITVLTRTAD 218 Query: 226 GIRMYYFYEFGFDKQHVALMATVDSGKTYIAAATAPETRW 107 G +H + ATV GK YI A A + RW Sbjct: 219 GDE---------GGKHQVIAATVKDGKLYICKAQAGDKRW 249
>PSBP1_TOBAC (Q7DM39) Oxygen-evolving enhancer protein 2-1, chloroplast| precursor (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane) Length = 268 Score = 31.2 bits (69), Expect = 2.6 Identities = 42/176 (23%), Positives = 68/176 (38%), Gaps = 15/176 (8%) Frame = -1 Query: 538 YYGSGFSIRVPPSFDDVLEPEDFSAAMTYYGDKAKVRAYAARFASPDRSELVSVVIKPSN 359 Y G GF ++VP ++ E E F + Y D + +P + ++ P Sbjct: 103 YNGDGFKLQVPAKWNPSKEVE-FPGQVLRYEDNFDSTSNLIVTVTPTDKKSITDYGSPEE 161 Query: 358 QL-KITFLEAKDIT----------ELGTLKEASKLFVPGSA---KIYSARTIKVKDQEGI 221 L ++ FL K E G + A+ L S K Y ++ + +G Sbjct: 162 FLTQVDFLLGKQAYFGKTDSEGGFESGAVATANLLETSSSTVGGKEYYILSVLTRTADGD 221 Query: 220 RMYYFYEFGFDKQHVALMATVDSGKTYIAAATAPETRW-ETDGVTLRSAAVSMSLA 56 +H + ATV+ GK YI A A + RW + + +AA S S+A Sbjct: 222 E---------GGKHQLISATVNGGKLYICKAQAGDKRWFKGARKFVENAATSFSVA 268
>UCP8_SCHPO (O94685) UBA domain-containing protein 8| Length = 884 Score = 30.8 bits (68), Expect = 3.4 Identities = 16/48 (33%), Positives = 27/48 (56%) Frame = +1 Query: 76 QPNAASLHLSPTSSLEQWQQRYMSSHYPRWPLEQHVVCQNQIHRSNTS 219 +P A SLH +P+SSLE Q + ++ + + V QNQ + ++ S Sbjct: 441 EPTAVSLHENPSSSLEDLQSAFQNTSF-----QDQVSTQNQANTADIS 483
>PSBP_BRAJU (Q96334) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) (Fragment) Length = 217 Score = 30.8 bits (68), Expect = 3.4 Identities = 41/177 (23%), Positives = 76/177 (42%), Gaps = 18/177 (10%) Frame = -1 Query: 532 GSGFSIRVPPSFDDVLEPEDFSAAMTYYGDKAKVRAYAARFASPDRSELVSVVIKPSNQL 353 G GF ++VP ++ E E Y G +V Y F D + ++V++ P+++ Sbjct: 54 GDGFQVQVPAKWNPSREVE-------YPG---QVLRYEDNF---DATSNLNVMVTPTDKK 100 Query: 352 KITFLEAKD--ITELGTLKEASKLFVPGSAK-------IYSARTIKVKDQE-GIRMYYFY 203 IT + + ++++ L F + + + +A ++ Q+ G + YY+ Sbjct: 101 SITDYGSPEEFLSQVNYLLGKQAYFGETACEGGFDNNAVATANILETNIQDVGGKPYYYL 160 Query: 202 EF-------GFDKQHVALMATVDSGKTYIAAATAPETRW-ETDGVTLRSAAVSMSLA 56 +H + ATV+ GK YI A A + RW + + AA S S+A Sbjct: 161 SVLTRTADEDEGGKHQLITATVNGGKLYICKAQAGDKRWFKGANKFVEKAATSFSVA 217
>RDRP_LVX (P27327) RNA replication protein (ORF 1 protein) [Includes:| RNA-directed RNA polymerase (EC 2.7.7.48); Helicase (EC 3.6.1.-)] (Fragment) Length = 162 Score = 30.4 bits (67), Expect = 4.4 Identities = 31/130 (23%), Positives = 52/130 (40%), Gaps = 20/130 (15%) Frame = -1 Query: 505 PSFDDVLEPEDFSAAMTYYGDKAKVRAYAAR-FASPDRSELVSVVIKPSNQLKITFLEAK 329 P+FD E A+ Y+ K +V A+ +A D ++ + ++KPS +L +E K Sbjct: 10 PTFDANTE-----CAIAYHHTKYQVEQGTAQLYAGDDMAQDTTPILKPSFRLIADRIELK 64 Query: 328 D-------------------ITELGTLKEASKLFVPGSAKIYSARTIKVKDQEGIRMYYF 206 +T G +KE KLF + +T +VK + + Sbjct: 65 SKEVTHTQVPGEYATFCGWCVTPKGIIKEPRKLFASLQLAKHIGKTAEVKTNYAHDLAHA 124 Query: 205 YEFGFDKQHV 176 Y G + Q V Sbjct: 125 YRLGDELQDV 134
>XYNB_STRLI (P26515) Endo-1,4-beta-xylanase B precursor (EC 3.2.1.8) (Xylanase| B) (1,4-beta-D-xylan xylanohydrolase B) Length = 335 Score = 29.3 bits (64), Expect = 9.8 Identities = 22/71 (30%), Positives = 30/71 (42%) Frame = -1 Query: 307 LKEASKLFVPGSAKIYSARTIKVKDQEGIRMYYFYEFGFDKQHVALMATVDSGKTYIAAA 128 L + L +PG+A+ A T+ +QEG Y+Y F D Q M + SG Y Sbjct: 27 LAALAALMLPGTAQ---ADTVVTTNQEGTNNGYYYSFWTDSQGTVSM-NMGSGGQY---- 78 Query: 127 TAPETRWETDG 95 T W G Sbjct: 79 ---STSWRNTG 86
>WNT1_XENLA (P10108) Protein Wnt-1 precursor (XWnt-1) (XInt-1)| Length = 371 Score = 29.3 bits (64), Expect = 9.8 Identities = 13/48 (27%), Positives = 20/48 (41%) Frame = -3 Query: 179 CCSNGHRG*WEDIYRCCHCSRDEVGDRWSDAAFGCCIYVSCXFCKTER 36 CC G+R E + CHC+ F C +V+C C + + Sbjct: 330 CCGRGYRSLAEKVTERCHCT------------FNWCCHVTCLNCTSSQ 365
>MUTS_SYMTH (Q67NK1) DNA mismatch repair protein mutS| Length = 875 Score = 29.3 bits (64), Expect = 9.8 Identities = 18/41 (43%), Positives = 22/41 (53%) Frame = +2 Query: 437 GLVAIIGHRGAEILGLQDVVEGRRHADGEAAAVVLRPRPRV 559 GL A + R EIL + EG R + EAAA LR +P V Sbjct: 791 GLPASVVERAREILATLEEQEGERKSRREAAAQRLRRQPAV 831 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 86,363,357 Number of Sequences: 219361 Number of extensions: 1752190 Number of successful extensions: 5169 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 5004 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5159 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5653129581 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)