ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal9i12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK060678.1| Oryza sativa (japonica cultivar-group) cDNA clon... 466 e-128
2gb|AC135418.3| Oryza sativa (japonica cultivar-group) chromosome... 139 1e-29
3dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 139 1e-29
4dbj|AB018798.1| Plasmodium yoelii gene for P-Type ATPase, comple... 44 0.54
5gb|AC140134.2| Homo sapiens chromosome 5 clone RP11-1319K7, comp... 42 2.1
6gb|AC142324.1| Pan troglodytes BAC clone RP43-73K6 from 7, compl... 42 2.1
7gb|AC139778.2| Homo sapiens chromosome 5 clone RP11-1012N14, com... 42 2.1
8gb|AC139277.2| Homo sapiens chromosome 5 clone RP11-619K7, compl... 42 2.1
9gb|AC010217.6| Homo sapiens chromosome 5 clone CTC-202F24, compl... 42 2.1
10gb|AC016554.8| Homo sapiens chromosome 5 clone CTC-340H12, compl... 42 2.1
11gb|AC022119.4|AC022119 Homo sapiens chromosome 5 clone CTC-566F1... 42 2.1
12gb|AC139834.2| Homo sapiens chromosome 5 clone RP11-974F13, comp... 42 2.1
13gb|AC139494.2| Homo sapiens chromosome 5 clone RP11-846E15, comp... 42 2.1
14gb|AC004999.1|AC004999 Homo sapiens PAC clone RP1-215P15 from 5q... 42 2.1
15emb|AL672307.9| Mouse DNA sequence from clone RP23-141N2 on chro... 42 2.1
16gb|AC154031.1| Drosophila melanogaster clone CH223-18M04, comple... 40 8.5
17gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence 40 8.5
18gb|CP000068.1| Trypanosoma brucei chromosome 5, complete sequence 40 8.5
19gb|AC159443.1| Trypanosoma brucei chromosome 5 clone RPCI93-30H1... 40 8.5
20gb|AY091599.1| Infectious salmon anemia virus isolate RPC/NB 980... 40 8.5
21gb|AC072052.6| Homo sapiens BAC clone CTD-2195F21 from 7, comple... 40 8.5
22gb|AC115290.5| Mus musculus BAC clone RP23-65M10 from chromosome... 40 8.5
23gb|AY118142.1| Uncultured Desulfobacterium sp. clone OR-M2 16S r... 40 8.5
24gb|AY167025.1| Schistosoma haematobium acetylcholinesterase gene... 40 8.5
25emb|AL607106.10| Human DNA sequence from clone RP11-207N22 on ch... 40 8.5
26gb|AC093574.3| Homo sapiens chromosome 3 clone RP11-178K11, comp... 40 8.5
27gb|AC090204.11| Homo sapiens chromosome 8, clone RP11-11N9, comp... 40 8.5
28gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome 40 8.5
29gb|AC113195.8| Homo sapiens chromosome 18, clone RP11-1112K22, c... 40 8.5
30gb|AC113209.4| Homo sapiens chromosome 8, clone RP11-1002K11, co... 40 8.5
31gb|AC087534.8| Homo sapiens chromosome 18, clone RP11-716B20, co... 40 8.5
32ref|XM_940588.1| PREDICTED: Homo sapiens similar to CG11064-PA (... 40 8.5
33gb|AF306549.1|AF306549 Infectious salmon anemia virus putative n... 40 8.5
34gb|AC012087.10|AC012087 Homo sapiens 3 BAC RP11-317L10,RP11-150K... 40 8.5
35gb|AE003846.5| Drosophila melanogaster chromosome 4, section 5 o... 40 8.5
36gb|AC122767.16| Mus musculus chromosome 7, clone RP24-143L4, com... 40 8.5
37gb|AC136741.24| Mus musculus chromosome 7, clone RP23-172P1, com... 40 8.5

>dbj|AK060678.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-C06, full
           insert sequence
          Length = 1032

 Score =  466 bits (235), Expect = e-128
 Identities = 445/515 (86%)
 Strand = Plus / Minus

                                                                       
Query: 62  agacatagatacagcagccgaacgcagcgtcactccatctgtctcccacctcgtctctgg 121
           ||||| ||||||||||||||| |||| | |||| |||||    |||||| | ||||||||
Sbjct: 851 agacaaagatacagcagccgatcgcaacttcacgccatcatcgtcccactttgtctctgg 792

                                                                       
Query: 122 agcagtggcagcagcgatatatgtcttcccactatccacggtggccattagagcaacatg 181
           |||||||||| | || ||||||||||| ||||||| ||| || ||||||| |||||||||
Sbjct: 791 agcagtggcaccggcaatatatgtctttccactattcacagtagccattacagcaacatg 732

                                                                       
Query: 182 ttgtttgtcaaaaccaaattcatagaagtaatacatccttataccctcctgatccttaac 241
           || |||||| | |||||| ||||| ||||||||  |||||||| | || | |||||||||
Sbjct: 731 ttctttgtccacaccaaactcataaaagtaatatgtccttatatcatcttcatccttaac 672

                                                                       
Query: 242 tttaattgttcgagctgagtatatttttgcactgccaggtacaaataacttggatgcctc 301
           ||||||||||||||||||||||| |||||| |  ||||||||||||| ||| ||||||||
Sbjct: 671 tttaattgttcgagctgagtataattttgcgccaccaggtacaaatatctttgatgcctc 612

                                                                       
Query: 302 ctttagagtgcccaactccgttatatctttggcctctaggaatgtgatcttgagctgatt 361
           ||||| ||||||||  || |||| |||||||||||||||||||||||| |||||||||||
Sbjct: 611 ctttaaagtgcccaggtctgttacatctttggcctctaggaatgtgattttgagctgatt 552

                                                                       
Query: 362 ggatggcttgattaccacacttacaagttctgacctgtctggagatgcgaaccgagctgc 421
            |||||||| |||||||| ||||||||||| |||||||| ||||| ||||| ||||| ||
Sbjct: 551 cgatggcttaattaccacgcttacaagttcagacctgtccggagacgcgaagcgagcagc 492

                                                                       
Query: 422 gtacgccctgaccttggccttgtcgccataataggtcatcgcggcgctgaaatcctcggg 481
           ||| | ||||  ||| ||||||||||| || ||||||| | || || |||| ||||||||
Sbjct: 491 gtatgtcctgggcttcgccttgtcgccgtagtaggtcaccccgacgttgaactcctcggg 432

                                                                       
Query: 482 ctccaagacgtcgtcgaaggacggcggcacgcggatggagaagccgctgccgtagtactg 541
           |||||||| |||||||||||| || || ||||||||||||||||||||||||||||||||
Sbjct: 431 ctccaagatgtcgtcgaaggaagggggaacgcggatggagaagccgctgccgtagtactg 372

                                              
Query: 542 cgaccacgacctcgtgtttgcgatgccgaccagca 576
           |||||||||| | ||||| ||||||||| ||||||
Sbjct: 371 cgaccacgacttggtgttcgcgatgccgcccagca 337



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>gb|AC135418.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0035J16, complete sequence
          Length = 170233

 Score =  139 bits (70), Expect = 1e-29
 Identities = 94/102 (92%)
 Strand = Plus / Minus

                                                                         
Query: 475   cctcgggctccaagacgtcgtcgaaggacggcggcacgcggatggagaagccgctgccgt 534
             ||||||||||||||| |||||||||||| || || |||||||||||||||||||||||||
Sbjct: 73843 cctcgggctccaagatgtcgtcgaaggaagggggaacgcggatggagaagccgctgccgt 73784

                                                       
Query: 535   agtactgcgaccacgacctcgtgtttgcgatgccgaccagca 576
             ||||||||||||||||| | ||||| ||||||||| ||||||
Sbjct: 73783 agtactgcgaccacgacttggtgttcgcgatgccgcccagca 73742



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 60/65 (92%)
 Strand = Plus / Minus

                                                                         
Query: 334   cctctaggaatgtgatcttgagctgattggatggcttgattaccacacttacaagttctg 393
             |||||||||||||||| ||||||||||| |||||||| |||||||| ||||||||||| |
Sbjct: 74298 cctctaggaatgtgattttgagctgattcgatggcttaattaccacgcttacaagttcag 74239

                  
Query: 394   acctg 398
             |||||
Sbjct: 74238 acctg 74234



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 55/61 (90%)
 Strand = Plus / Minus

                                                                         
Query: 276   ccaggtacaaataacttggatgcctcctttagagtgcccaactccgttatatctttggcc 335
             ||||||||||||| ||| ||||||||||||| ||||||||  || |||||||||||||||
Sbjct: 75126 ccaggtacaaatatctttgatgcctcctttaaagtgcccaggtctgttatatctttggcc 75067

              
Query: 336   t 336
             |
Sbjct: 75066 t 75066



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 38/39 (97%)
 Strand = Plus / Minus

                                                    
Query: 233   atccttaactttaattgttcgagctgagtatatttttgc 271
             |||||||||||||||||||||||||||||||| ||||||
Sbjct: 75787 atccttaactttaattgttcgagctgagtataattttgc 75749



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 72/86 (83%)
 Strand = Plus / Minus

                                                                         
Query: 62    agacatagatacagcagccgaacgcagcgtcactccatctgtctcccacctcgtctctgg 121
             ||||| ||||||||||||||| |||| | |||| |||||    |||||| | ||||||||
Sbjct: 76339 agacaaagatacagcagccgatcgcaacttcacgccatcatcgtcccactttgtctctgg 76280

                                       
Query: 122   agcagtggcagcagcgatatatgtct 147
             |||||||||| | || ||||||||||
Sbjct: 76279 agcagtggcaccggcaatatatgtct 76254



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 56/65 (86%)
 Strand = Plus / Minus

                                                                         
Query: 150   ccactatccacggtggccattagagcaacatgttgtttgtcaaaaccaaattcatagaag 209
             ||||||| ||| || ||||||| ||||||||||| |||||| | |||||| ||||| |||
Sbjct: 75997 ccactattcacagtagccattacagcaacatgttctttgtccacaccaaactcataaaag 75938

                  
Query: 210   taata 214
             |||||
Sbjct: 75937 taata 75933



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 57/68 (83%)
 Strand = Plus / Minus

                                                                         
Query: 394   acctgtctggagatgcgaaccgagctgcgtacgccctgaccttggccttgtcgccataat 453
             ||||||| ||||| ||||| ||||| ||||| | ||||  ||| ||||||||||| || |
Sbjct: 74041 acctgtccggagacgcgaagcgagcagcgtatgtcctgggcttcgccttgtcgccgtagt 73982

                     
Query: 454   aggtcatc 461
             ||||||||
Sbjct: 73981 aggtcatc 73974



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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  139 bits (70), Expect = 1e-29
 Identities = 94/102 (92%)
 Strand = Plus / Minus

                                                                            
Query: 475      cctcgggctccaagacgtcgtcgaaggacggcggcacgcggatggagaagccgctgccgt 534
                ||||||||||||||| |||||||||||| || || |||||||||||||||||||||||||
Sbjct: 19370494 cctcgggctccaagatgtcgtcgaaggaagggggaacgcggatggagaagccgctgccgt 19370435

                                                          
Query: 535      agtactgcgaccacgacctcgtgtttgcgatgccgaccagca 576
                ||||||||||||||||| | ||||| ||||||||| ||||||
Sbjct: 19370434 agtactgcgaccacgacttggtgttcgcgatgccgcccagca 19370393



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 60/65 (92%)
 Strand = Plus / Minus

                                                                            
Query: 334      cctctaggaatgtgatcttgagctgattggatggcttgattaccacacttacaagttctg 393
                |||||||||||||||| ||||||||||| |||||||| |||||||| ||||||||||| |
Sbjct: 19370949 cctctaggaatgtgattttgagctgattcgatggcttaattaccacgcttacaagttcag 19370890

                     
Query: 394      acctg 398
                |||||
Sbjct: 19370889 acctg 19370885



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 55/61 (90%)
 Strand = Plus / Minus

                                                                            
Query: 276      ccaggtacaaataacttggatgcctcctttagagtgcccaactccgttatatctttggcc 335
                ||||||||||||| ||| ||||||||||||| ||||||||  || |||||||||||||||
Sbjct: 19371777 ccaggtacaaatatctttgatgcctcctttaaagtgcccaggtctgttatatctttggcc 19371718

                 
Query: 336      t 336
                |
Sbjct: 19371717 t 19371717



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 38/39 (97%)
 Strand = Plus / Minus

                                                       
Query: 233      atccttaactttaattgttcgagctgagtatatttttgc 271
                |||||||||||||||||||||||||||||||| ||||||
Sbjct: 19372438 atccttaactttaattgttcgagctgagtataattttgc 19372400



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 72/86 (83%)
 Strand = Plus / Minus

                                                                            
Query: 62       agacatagatacagcagccgaacgcagcgtcactccatctgtctcccacctcgtctctgg 121
                ||||| ||||||||||||||| |||| | |||| |||||    |||||| | ||||||||
Sbjct: 19372990 agacaaagatacagcagccgatcgcaacttcacgccatcatcgtcccactttgtctctgg 19372931

                                          
Query: 122      agcagtggcagcagcgatatatgtct 147
                |||||||||| | || ||||||||||
Sbjct: 19372930 agcagtggcaccggcaatatatgtct 19372905



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 56/65 (86%)
 Strand = Plus / Minus

                                                                            
Query: 150      ccactatccacggtggccattagagcaacatgttgtttgtcaaaaccaaattcatagaag 209
                ||||||| ||| || ||||||| ||||||||||| |||||| | |||||| ||||| |||
Sbjct: 19372648 ccactattcacagtagccattacagcaacatgttctttgtccacaccaaactcataaaag 19372589

                     
Query: 210      taata 214
                |||||
Sbjct: 19372588 taata 19372584



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 57/68 (83%)
 Strand = Plus / Minus

                                                                            
Query: 394      acctgtctggagatgcgaaccgagctgcgtacgccctgaccttggccttgtcgccataat 453
                ||||||| ||||| ||||| ||||| ||||| | ||||  ||| ||||||||||| || |
Sbjct: 19370692 acctgtccggagacgcgaagcgagcagcgtatgtcctgggcttcgccttgtcgccgtagt 19370633

                        
Query: 454      aggtcatc 461
                ||||||||
Sbjct: 19370632 aggtcatc 19370625



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>dbj|AB018798.1| Plasmodium yoelii gene for P-Type ATPase, complete cds
          Length = 7852

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 7  taatatataatgataatagttg 28
          ||||||||||||||||||||||
Sbjct: 45 taatatataatgataatagttg 24



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>gb|AC140134.2| Homo sapiens chromosome 5 clone RP11-1319K7, complete sequence
          Length = 217820

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 7     taatatataatgataatagtt 27
             |||||||||||||||||||||
Sbjct: 89716 taatatataatgataatagtt 89736



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>gb|AC142324.1| Pan troglodytes BAC clone RP43-73K6 from 7, complete sequence
          Length = 178050

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 4      ttctaatatataatgataata 24
              |||||||||||||||||||||
Sbjct: 124015 ttctaatatataatgataata 124035



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>gb|AC139778.2| Homo sapiens chromosome 5 clone RP11-1012N14, complete sequence
          Length = 180014

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 7      taatatataatgataatagtt 27
              |||||||||||||||||||||
Sbjct: 137801 taatatataatgataatagtt 137781



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>gb|AC139277.2| Homo sapiens chromosome 5 clone RP11-619K7, complete sequence
          Length = 199996

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 7      taatatataatgataatagtt 27
              |||||||||||||||||||||
Sbjct: 183508 taatatataatgataatagtt 183528



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>gb|AC010217.6| Homo sapiens chromosome 5 clone CTC-202F24, complete sequence
          Length = 169137

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 7     taatatataatgataatagtt 27
             |||||||||||||||||||||
Sbjct: 63927 taatatataatgataatagtt 63907



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>gb|AC016554.8| Homo sapiens chromosome 5 clone CTC-340H12, complete sequence
          Length = 113213

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 7     taatatataatgataatagtt 27
             |||||||||||||||||||||
Sbjct: 61661 taatatataatgataatagtt 61681



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>gb|AC022119.4|AC022119 Homo sapiens chromosome 5 clone CTC-566F17, complete sequence
          Length = 155974

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 7     taatatataatgataatagtt 27
             |||||||||||||||||||||
Sbjct: 22755 taatatataatgataatagtt 22775



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>gb|AC139834.2| Homo sapiens chromosome 5 clone RP11-974F13, complete sequence
          Length = 185457

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 7      taatatataatgataatagtt 27
              |||||||||||||||||||||
Sbjct: 152531 taatatataatgataatagtt 152551



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>gb|AC139494.2| Homo sapiens chromosome 5 clone RP11-846E15, complete sequence
          Length = 210288

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 7     taatatataatgataatagtt 27
             |||||||||||||||||||||
Sbjct: 94800 taatatataatgataatagtt 94820



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>gb|AC004999.1|AC004999 Homo sapiens PAC clone RP1-215P15 from 5q12, complete sequence
          Length = 129541

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 7     taatatataatgataatagtt 27
             |||||||||||||||||||||
Sbjct: 74835 taatatataatgataatagtt 74815



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>emb|AL672307.9| Mouse DNA sequence from clone RP23-141N2 on chromosome 2, complete
              sequence
          Length = 206168

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 174    gcaacatgttgtttgtcaaaaccaa 198
              ||||||||||||| |||||||||||
Sbjct: 184449 gcaacatgttgttggtcaaaaccaa 184425



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>gb|AC154031.1| Drosophila melanogaster clone CH223-18M04, complete sequence
          Length = 36227

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 174   gcaacatgttgtttgtcaaa 193
             ||||||||||||||||||||
Sbjct: 33127 gcaacatgttgtttgtcaaa 33108



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>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence
          Length = 3587082

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 490     cgtcgtcgaaggacggcggcacgc 513
               |||||| |||||||||||||||||
Sbjct: 1991066 cgtcgttgaaggacggcggcacgc 1991089



 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 502    acggcggcacgcggatggag 521
              ||||||||||||||||||||
Sbjct: 231288 acggcggcacgcggatggag 231307



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>gb|CP000068.1| Trypanosoma brucei chromosome 5, complete sequence
          Length = 1608198

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 157    ccacggtggccattagagcaacat 180
              ||||||| ||||||||||||||||
Sbjct: 410876 ccacggttgccattagagcaacat 410853



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>gb|AC159443.1| Trypanosoma brucei chromosome 5 clone RPCI93-30H13, complete sequence
          Length = 152941

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 157   ccacggtggccattagagcaacat 180
             ||||||| ||||||||||||||||
Sbjct: 27427 ccacggttgccattagagcaacat 27404



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>gb|AY091599.1| Infectious salmon anemia virus isolate RPC/NB 980280-2
           nucleoprotein mRNA, complete cds
          Length = 1851

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 117 tctggagcagtggcagcagc 136
           ||||||||||||||||||||
Sbjct: 250 tctggagcagtggcagcagc 269



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>gb|AC072052.6| Homo sapiens BAC clone CTD-2195F21 from 7, complete sequence
          Length = 137074

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 100   ctgtctcccacctcgtctct 119
             ||||||||||||||||||||
Sbjct: 86705 ctgtctcccacctcgtctct 86724



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>gb|AC115290.5| Mus musculus BAC clone RP23-65M10 from chromosome 10, complete sequence
          Length = 245623

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 90     gtcactccatctgtctccca 109
              ||||||||||||||||||||
Sbjct: 125826 gtcactccatctgtctccca 125845



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>gb|AY118142.1| Uncultured Desulfobacterium sp. clone OR-M2 16S ribosomal RNA gene,
           partial sequence
          Length = 400

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 300 tcctttagagtgcccaactc 319
           ||||||||||||||||||||
Sbjct: 34  tcctttagagtgcccaactc 15



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>gb|AY167025.1| Schistosoma haematobium acetylcholinesterase gene, complete cds
          Length = 23383

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 194   accaaattcatagaagtaat 213
             ||||||||||||||||||||
Sbjct: 20790 accaaattcatagaagtaat 20771



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>emb|AL607106.10| Human DNA sequence from clone RP11-207N22 on chromosome 1 Contains part
             of the CSMD2 gene for CUB and Sushi multiple domains 2,
             complete sequence
          Length = 36777

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 259   agtatatttttgcactgcca 278
             ||||||||||||||||||||
Sbjct: 24031 agtatatttttgcactgcca 24050



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>gb|AC093574.3| Homo sapiens chromosome 3 clone RP11-178K11, complete sequence
          Length = 151993

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 201   tcatagaagtaatacatcct 220
             ||||||||||||||||||||
Sbjct: 79030 tcatagaagtaatacatcct 79049



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>gb|AC090204.11| Homo sapiens chromosome 8, clone RP11-11N9, complete sequence
          Length = 173191

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 343  atgtgatcttgagctgattg 362
            ||||||||||||||||||||
Sbjct: 7147 atgtgatcttgagctgattg 7128



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>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome
          Length = 2932766

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 116     ctctggagcagtggcagcag 135
               ||||||||||||||||||||
Sbjct: 2515177 ctctggagcagtggcagcag 2515196



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>gb|AC113195.8| Homo sapiens chromosome 18, clone RP11-1112K22, complete sequence
          Length = 162760

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 7      taatatataatgataatagt 26
              ||||||||||||||||||||
Sbjct: 144097 taatatataatgataatagt 144116



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>gb|AC113209.4| Homo sapiens chromosome 8, clone RP11-1002K11, complete sequence
          Length = 193991

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 343   atgtgatcttgagctgattg 362
             ||||||||||||||||||||
Sbjct: 46666 atgtgatcttgagctgattg 46685



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>gb|AC087534.8| Homo sapiens chromosome 18, clone RP11-716B20, complete sequence
          Length = 176966

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 7      taatatataatgataatagt 26
              ||||||||||||||||||||
Sbjct: 139099 taatatataatgataatagt 139080



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>ref|XM_940588.1| PREDICTED: Homo sapiens similar to CG11064-PA (LOC654187), mRNA
          Length = 3570

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 117  tctggagcagtggcagcagc 136
            ||||||||||||||||||||
Sbjct: 1654 tctggagcagtggcagcagc 1635



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>gb|AF306549.1|AF306549 Infectious salmon anemia virus putative nucleoprotein mRNA,
           complete cds
          Length = 2042

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 117 tctggagcagtggcagcagc 136
           ||||||||||||||||||||
Sbjct: 309 tctggagcagtggcagcagc 328



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>gb|AC012087.10|AC012087 Homo sapiens 3 BAC RP11-317L10,RP11-150K6,RP11-68D12 (Roswell Park
             Cancer Institute Human BAC Library) complete sequence
          Length = 194635

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 201   tcatagaagtaatacatcct 220
             ||||||||||||||||||||
Sbjct: 11901 tcatagaagtaatacatcct 11882



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>gb|AE003846.5| Drosophila melanogaster chromosome 4, section 5 of 5 of the complete
              sequence
          Length = 356494

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 174    gcaacatgttgtttgtcaaa 193
              ||||||||||||||||||||
Sbjct: 292666 gcaacatgttgtttgtcaaa 292647



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>gb|AC122767.16| Mus musculus chromosome 7, clone RP24-143L4, complete sequence
          Length = 192484

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 255    gctgagtatatttttgcact 274
              ||||||||||||||||||||
Sbjct: 170096 gctgagtatatttttgcact 170077



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>gb|AC136741.24| Mus musculus chromosome 7, clone RP23-172P1, complete sequence
          Length = 211802

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 255    gctgagtatatttttgcact 274
              ||||||||||||||||||||
Sbjct: 160680 gctgagtatatttttgcact 160699


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,695,923
Number of Sequences: 3902068
Number of extensions: 4695923
Number of successful extensions: 126426
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 126239
Number of HSP's gapped (non-prelim): 184
length of query: 622
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 599
effective length of database: 17,143,297,704
effective search space: 10268835324696
effective search space used: 10268835324696
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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