ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags12m22 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY111185.1| Zea mays CL5511_1 mRNA sequence Length = 1065 Score = 79.8 bits (40), Expect = 9e-12 Identities = 61/68 (89%) Strand = Plus / Plus Query: 104 tctggcttttcacagcacacactgcagtccttcaccgtagagaggttgcgtgcacttctc 163 |||||||||||||| |||||||||||||| || || || ||||| |||||||||||||| Sbjct: 443 tctggcttttcacaacacacactgcagtcatttacagtggagagattgcgtgcacttcta 502 Query: 164 cgacaaag 171 |||||||| Sbjct: 503 cgacaaag 510
>gb|AC131343.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0057E15, complete sequence Length = 149035 Score = 73.8 bits (37), Expect = 5e-10 Identities = 70/81 (86%) Strand = Plus / Plus Query: 119 cacacactgcagtccttcaccgtagagaggttgcgtgcacttctccgacaaagaggcctc 178 |||||||| ||| | ||||| || |||||||||||||||||||| ||||| || |||||| Sbjct: 65112 cacacactacagacattcacagttgagaggttgcgtgcacttctgcgacagaggggcctc 65171 Query: 179 acaaccaaggggaaaaaggca 199 | ||||| |||||||||||| Sbjct: 65172 atgaccaaagggaaaaaggca 65192
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 73.8 bits (37), Expect = 5e-10 Identities = 70/81 (86%) Strand = Plus / Plus Query: 119 cacacactgcagtccttcaccgtagagaggttgcgtgcacttctccgacaaagaggcctc 178 |||||||| ||| | ||||| || |||||||||||||||||||| ||||| || |||||| Sbjct: 16424513 cacacactacagacattcacagttgagaggttgcgtgcacttctgcgacagaggggcctc 16424572 Query: 179 acaaccaaggggaaaaaggca 199 | ||||| |||||||||||| Sbjct: 16424573 atgaccaaagggaaaaaggca 16424593 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 ggggaaaaaggcatatcatg 206 |||||||||||||||||||| Sbjct: 26563055 ggggaaaaaggcatatcatg 26563074
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 73.8 bits (37), Expect = 5e-10 Identities = 70/81 (86%) Strand = Plus / Plus Query: 119 cacacactgcagtccttcaccgtagagaggttgcgtgcacttctccgacaaagaggcctc 178 |||||||| ||| | ||||| || |||||||||||||||||||| ||||| || |||||| Sbjct: 16515517 cacacactacagacattcacagttgagaggttgcgtgcacttctgcgacagaggggcctc 16515576 Query: 179 acaaccaaggggaaaaaggca 199 | ||||| |||||||||||| Sbjct: 16515577 atgaccaaagggaaaaaggca 16515597 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 ggggaaaaaggcatatcatg 206 |||||||||||||||||||| Sbjct: 26888319 ggggaaaaaggcatatcatg 26888338
>dbj|AK103748.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033142D19, full insert sequence Length = 926 Score = 69.9 bits (35), Expect = 9e-09 Identities = 68/79 (86%) Strand = Plus / Plus Query: 119 cacacactgcagtccttcaccgtagagaggttgcgtgcacttctccgacaaagaggcctc 178 |||||||| ||| | ||||| || |||||||||||||||||||| ||||| || |||||| Sbjct: 476 cacacactacagacattcacagttgagaggttgcgtgcacttctgcgacagaggggcctc 535 Query: 179 acaaccaaggggaaaaagg 197 | ||||| |||||||||| Sbjct: 536 atgaccaaagggaaaaagg 554
>gb|BT018212.1| Zea mays clone EL01N0560G11.c mRNA sequence Length = 735 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 104 tctggcttttcacagcacacactgcagtccttcaccgtagagaggttgcgtgcacttctc 163 ||||| |||||||| |||||||||||| | || || || ||||| | |||||||||||| Sbjct: 386 tctgggttttcacaacacacactgcagacatttacagtggagagatggcgtgcacttcta 445 Query: 164 cgacaaag 171 |||||||| Sbjct: 446 cgacaaag 453
>gb|AE014175.1| Mus musculus piebald deletion region section 3 of 11 of the complete sequence Length = 404829 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 489 gaaattaattggtggacataaa 510 |||||||||||||||||||||| Sbjct: 169201 gaaattaattggtggacataaa 169222
>gb|AC114410.9| Mus musculus chromosome 14, clone RP23-151K8, complete sequence Length = 201783 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 489 gaaattaattggtggacataaa 510 |||||||||||||||||||||| Sbjct: 41137 gaaattaattggtggacataaa 41158
>gb|AC147479.17| Mus musculus chromosome 17, clone RP24-178C19, complete sequence Length = 178820 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 262 ataaacatttgaattctgcttcaaa 286 |||||||||| |||||||||||||| Sbjct: 98925 ataaacattttaattctgcttcaaa 98949
>gb|AC151292.2| Mus musculus BAC clone RP23-138P14 from chromosome 17, complete sequence Length = 216585 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 262 ataaacatttgaattctgcttcaaa 286 |||||||||| |||||||||||||| Sbjct: 134985 ataaacattttaattctgcttcaaa 134961
>gb|AC102083.12| Mus musculus chromosome 16, clone RP23-269L18, complete sequence Length = 205875 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 269 tttgaattctgcttcaaaagaactt 293 |||||||||||||||| |||||||| Sbjct: 61334 tttgaattctgcttcacaagaactt 61358
>emb|BX901891.12| Zebrafish DNA sequence from clone CH211-175N2 in linkage group 1, complete sequence Length = 148678 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 360 tgaaaattcattttgtagtga 380 ||||||||||||||||||||| Sbjct: 116254 tgaaaattcattttgtagtga 116274
>emb|AL354714.22| Human DNA sequence from clone RP11-312J18 on chromosome 1 Contains the 3' end of the LY9 gene for lymphocyte antigen 9, the CD244 gene for CD244 natural killer cell receptor 2B4, a peptidylprolyl isomerase A (cyclophilin A) (PPIA) pseudogene, the ITLN1 gene for intelectin 1 (galactofuranose binding), a spermine synthase (SMS) pseudogene, a novel gene, a pseudogene similar to part of DEAD (Asp-Glu-Ala-Asp) box polypeptide 56 (DDX56), the 5' end of a novel gene and the 3' end of ITLN2 gene for intelectin 2, complete sequence Length = 141296 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 447 tatgtattctgcaattattagcagaattg 475 |||||||||||||||| |||| ||||||| Sbjct: 40697 tatgtattctgcaattgttaggagaattg 40669
>emb|BX601644.6| Zebrafish DNA sequence from clone DKEY-21O13 in linkage group 9, complete sequence Length = 217065 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 362 aaaattcattttgtagtgatt 382 ||||||||||||||||||||| Sbjct: 42228 aaaattcattttgtagtgatt 42208
>emb|BX005417.13| Zebrafish DNA sequence from clone DKEY-240N22, complete sequence Length = 175997 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 81 tgccttcctctgaggaagcaa 101 ||||||||||||||||||||| Sbjct: 56725 tgccttcctctgaggaagcaa 56745
>gb|AC145909.3| Gallus gallus BAC clone CH261-43H20 from chromosome unknown, complete sequence Length = 213402 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 265 aacatttgaattctgcttcaa 285 ||||||||||||||||||||| Sbjct: 85524 aacatttgaattctgcttcaa 85504
>gb|AC095247.5| Rattus norvegicus 4 BAC CH230-10C6 (Children's Hospital Oakland Research Institute) complete sequence Length = 238466 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 362 aaaattcattttgtagtgatttca 385 ||||||||||||| |||||||||| Sbjct: 115869 aaaattcattttgcagtgatttca 115892
>gb|AC149716.2| Bos taurus BAC CH240-31B10 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 171707 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 508 aaaccaaaaatcagtgatgc 527 |||||||||||||||||||| Sbjct: 71117 aaaccaaaaatcagtgatgc 71098
>ref|XM_866943.1| PREDICTED: Bos taurus similar to Protein C21orf51 homolog (LOC615202), mRNA Length = 468 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 529 agtattttgtttgctagaataaaa 552 |||||||||||||||| ||||||| Sbjct: 434 agtattttgtttgctaaaataaaa 457
>gb|AC087066.3| Rattus norvegicus strain Brown Norway clone RP31-194D8, complete sequence Length = 166751 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 362 aaaattcattttgtagtgatttca 385 ||||||||||||| |||||||||| Sbjct: 111433 aaaattcattttgcagtgatttca 111456
>gb|AC134923.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBb0030I07, complete sequence Length = 122733 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 ggggaaaaaggcatatcatg 206 |||||||||||||||||||| Sbjct: 25313 ggggaaaaaggcatatcatg 25332
>gb|AC121216.4| Rattus norvegicus 4 CH230-220A21 (Children's Hospital Oakland Research Institute) complete sequence Length = 224326 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 362 aaaattcattttgtagtgatttca 385 ||||||||||||| |||||||||| Sbjct: 28378 aaaattcattttgcagtgatttca 28401
>gb|AC134335.2| Mus musculus BAC clone RP24-150I18 from chromosome 15, complete sequence Length = 166926 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 tctgaatttaaagttcatag 238 |||||||||||||||||||| Sbjct: 68303 tctgaatttaaagttcatag 68322
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 tgcttgaaaattcattttgt 375 |||||||||||||||||||| Sbjct: 1718034 tgcttgaaaattcattttgt 1718053
>ref|XM_668359.1| Plasmodium berghei strain ANKA hypothetical protein (PB000283.00.0) partial mRNA Length = 300 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 208 ttgaaatttattctgaattt 227 |||||||||||||||||||| Sbjct: 57 ttgaaatttattctgaattt 38
>gb|AC160629.6| Medicago truncatula clone mth2-24p23, complete sequence Length = 64145 Score = 40.1 bits (20), Expect = 7.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 215 ttattctgaatttaaagttcatagaattaaaa 246 ||||||| ||||||||||| |||| ||||||| Sbjct: 62159 ttattctcaatttaaagtttatagcattaaaa 62190
>emb|Z68223.1|HSE110C7 Human DNA sequence from clone LL22NC01-110C7 on chromosome 22, complete sequence Length = 38924 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 217 attctgaatttaaagttcat 236 |||||||||||||||||||| Sbjct: 8627 attctgaatttaaagttcat 8646
>emb|AL354776.15| Human DNA sequence from clone RP11-196N14 on chromosome 20 Contains the 3' end of the PPP4R1L gene for protein phosphatase 4 regulatory subunit 1-like, the C20orf85 gene for an ankyrin domain-containing protein, the C20orf86 gene and three CpG islands, complete sequence Length = 146208 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 256 aatggtataaacatttgaat 275 |||||||||||||||||||| Sbjct: 10676 aatggtataaacatttgaat 10657
>emb|AL161657.22| Human DNA sequence from clone RP11-46O3 on chromosome 20 Contains ESTs, STSs and GSSs, complete sequence Length = 92132 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 337 tttctgaatatgctccacat 356 |||||||||||||||||||| Sbjct: 65069 tttctgaatatgctccacat 65050
>gb|AC120049.5| Homo sapiens chromosome 18, clone RP11-456K23, complete sequence Length = 125488 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 ttaaaaatcttaatcaatgg 260 |||||||||||||||||||| Sbjct: 86121 ttaaaaatcttaatcaatgg 86140
>emb|AL031906.1|HS90O12 Human DNA sequence from clone RP1-90O12 on chromosome 6p24.1-25.1, complete sequence Length = 99035 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 aaaagcccaagttgggcagt 70 |||||||||||||||||||| Sbjct: 78813 aaaagcccaagttgggcagt 78794
>gb|AC135643.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0023F01, complete sequence Length = 145009 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 ggggaaaaaggcatatcatg 206 |||||||||||||||||||| Sbjct: 26665 ggggaaaaaggcatatcatg 26646
>gb|AC175113.4| Mus musculus chromosome 5, clone wi1-1720A8, complete sequence Length = 40343 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 225 tttaaagttcatagaattaaaaat 248 ||||||||||||| |||||||||| Sbjct: 20946 tttaaagttcatataattaaaaat 20969
>emb|AL593853.11| Mouse DNA sequence from clone RP23-199A2 on chromosome 11 Contains the 5' end of a novel gene, the Sfrs1 gene for arginine/serine-rich splicing factor 1 (ASF/SF2), the Vezf1 gene for vascular endothelial zinc finger 1, a novel gene (2210416O15Rik), the gene for the likely ortholog of H. sapiens CUE domain containing 1 CUEDC1 (C330016O16Rik), the Mrps23 gene for mitochondrial ribosomal protein S23 and two CpG islands, complete sequence Length = 223276 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 ttttcacagcacacactgca 129 |||||||||||||||||||| Sbjct: 37298 ttttcacagcacacactgca 37279
>emb|AL669943.9| Mouse DNA sequence from clone RP23-286C19 on chromosome 11 Contains a pseudogene similar to part of ribosomal protein L7a (Rpl7a) and a heat shock protein 1 (chaperonin) (Hspd1) pseudogene, complete sequence Length = 204312 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 aggggaaaaaggcatatcat 205 |||||||||||||||||||| Sbjct: 118657 aggggaaaaaggcatatcat 118676
>dbj|AB190354.1| Brassica rapa BrSRK-f2, BrSP11-f2 genes, complete cds Length = 38542 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 223 aatttaaagttcatagaatt 242 |||||||||||||||||||| Sbjct: 17330 aatttaaagttcatagaatt 17311
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 tgcttgaaaattcattttgt 375 |||||||||||||||||||| Sbjct: 1526593 tgcttgaaaattcattttgt 1526612
>gb|AC107988.4| Homo sapiens chromosome 18, clone CTC-346I21, complete sequence Length = 116247 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 ttaaaaatcttaatcaatgg 260 |||||||||||||||||||| Sbjct: 3457 ttaaaaatcttaatcaatgg 3438
>gb|AC021766.6| Homo sapiens, clone RP11-9H20, complete sequence Length = 151558 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 ttaaaaatcttaatcaatgg 260 |||||||||||||||||||| Sbjct: 35034 ttaaaaatcttaatcaatgg 35053
>ref|XM_628230.1| Cryptosporidium parvum Iowa II hypothetical protein (cgd7_400), partial mRNA Length = 1044 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 366 ttcattttgtagtgatttca 385 |||||||||||||||||||| Sbjct: 210 ttcattttgtagtgatttca 191
>dbj|AK083973.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length enriched library, clone:D130071A13 product:unclassifiable, full insert sequence Length = 3789 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 225 tttaaagttcatagaattaaaaat 248 ||||||||||||| |||||||||| Sbjct: 3780 tttaaagttcatataattaaaaat 3757
>emb|BX284616.13| Zebrafish DNA sequence from clone DKEY-192I20 in linkage group 19, complete sequence Length = 223573 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 210 gaaatttattctgaatttaa 229 |||||||||||||||||||| Sbjct: 39879 gaaatttattctgaatttaa 39860
>gb|DP000027.1| Rattus norvegicus target 1 genomic scaffold Length = 1888123 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 362 aaaattcattttgtagtgatttca 385 ||||||||||||| |||||||||| Sbjct: 939771 aaaattcattttgcagtgatttca 939794
>gb|AC009410.3| Homo sapiens BAC clone RP11-335M11 from 2, complete sequence Length = 189812 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 516 aatcagtgatgcaagtattt 535 |||||||||||||||||||| Sbjct: 57324 aatcagtgatgcaagtattt 57343
>dbj|AK183432.1| Mus musculus cDNA, clone:Y0G0125N24, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000064230, based on BLAT search Length = 432 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 gtcaaaaagcccaagttggg 66 |||||||||||||||||||| Sbjct: 130 gtcaaaaagcccaagttggg 111
>emb|AL357614.5|HS367B10 Homo sapiens chromosome 9 BAC RP11-367B10, complete sequence Length = 182378 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 250 ttaatcaatggtataaacatttgaattc 277 ||||| |||||||||||| ||||||||| Sbjct: 140814 ttaatgaatggtataaacttttgaattc 140841
>emb|CR318628.8| Zebrafish DNA sequence from clone DKEY-148N22 in linkage group 19, complete sequence Length = 115655 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 210 gaaatttattctgaatttaa 229 |||||||||||||||||||| Sbjct: 1591 gaaatttattctgaatttaa 1610
>gb|AC153642.7| Mus musculus 6 BAC RP23-334E23 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 227781 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 318 acatttgacatcttggatatttct 341 ||||||||| |||||||||||||| Sbjct: 191078 acatttgacttcttggatatttct 191055
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 tgcttgaaaattcattttgt 375 |||||||||||||||||||| Sbjct: 1543146 tgcttgaaaattcattttgt 1543165
>dbj|AB011667.1| Ipomoea purpurea genes for dihydroflavonol 4-reductase, complete cds Length = 16845 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 aattaaaaatcttaatcaat 258 |||||||||||||||||||| Sbjct: 10347 aattaaaaatcttaatcaat 10328
>emb|BX293540.5| Zebrafish DNA sequence from clone DKEY-255N2 in linkage group 8, complete sequence Length = 181168 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 210 gaaatttattctgaatttaa 229 |||||||||||||||||||| Sbjct: 180759 gaaatttattctgaatttaa 180778
>gb|DQ068017.1| Phaeolepiota aurea RNA polymerase II largest subunit (RPB1) gene, partial sequence Length = 1212 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 106 tggcttttcacagcacacac 125 |||||||||||||||||||| Sbjct: 366 tggcttttcacagcacacac 347
>gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome Length = 5224283 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 538 tttgctagaataaaaggatgaaat 561 ||||||||| |||||||||||||| Sbjct: 1294704 tttgctagattaaaaggatgaaat 1294727
>gb|AC157946.2| Mus musculus BAC clone RP23-281H11 from chromosome 15, complete sequence Length = 190752 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 tctgaatttaaagttcatag 238 |||||||||||||||||||| Sbjct: 133808 tctgaatttaaagttcatag 133827
>emb|AL929001.7| Mouse DNA sequence from clone RP23-324H1 on chromosome 2, complete sequence Length = 147727 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 294 aattgaatatcagatatatc 313 |||||||||||||||||||| Sbjct: 121608 aattgaatatcagatatatc 121589
>emb|AL627205.12| Mouse DNA sequence from clone RP23-41E14 on chromosome 11, complete sequence Length = 223794 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 531 tattttgtttgctagaataa 550 |||||||||||||||||||| Sbjct: 112749 tattttgtttgctagaataa 112768 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,415,160 Number of Sequences: 3902068 Number of extensions: 6415160 Number of successful extensions: 147538 Number of sequences better than 10.0: 56 Number of HSP's better than 10.0 without gapping: 58 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 147233 Number of HSP's gapped (non-prelim): 305 length of query: 562 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 539 effective length of database: 17,143,297,704 effective search space: 9240237462456 effective search space used: 9240237462456 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
