Clone Name	bags12m18
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	ref|XM_483183.1| Oryza sativa (japonica cultivar-group), mRNA	692	0.0
2	dbj|AK058215.1| Oryza sativa (japonica cultivar-group) cDNA clon...	692	0.0
3	emb|AM234671.1| Oryza sativa mRNA for COP9 signalosome subunit 6...	692	0.0
4	gb|AY104920.1| Zea mays PCO100740 mRNA sequence	595	e-167
5	gb|BT017731.1| Zea mays clone EL01N0448B12.c mRNA sequence	587	e-164
6	ref|NM_118776.2| Arabidopsis thaliana CSN6B AT4G26430 (CSN6B) mR...	141	3e-30
7	ref|NM_125011.2| Arabidopsis thaliana CSN6A AT5G56280 (CSN6A) mR...	141	3e-30
8	gb|AY080638.1| Arabidopsis thaliana unknown protein (At4g26430) ...	141	3e-30
9	gb|AF395064.1|AF395064 Arabidopsis thaliana CSN complex subunit ...	141	3e-30
10	gb|AF395063.1|AF395063 Arabidopsis thaliana CSN complex subunit ...	141	3e-30
11	gb|AY048692.1| Arabidopsis thaliana COP9 complex subunit 6 mRNA,...	141	3e-30
12	emb|BX826563.1|CNS0A38W Arabidopsis thaliana Full-length cDNA Co...	141	3e-30
13	emb|BX831835.1|CNS0A107 Arabidopsis thaliana Full-length cDNA Co...	141	3e-30
14	emb|BX832027.1|CNS09YTR Arabidopsis thaliana Full-length cDNA Co...	141	3e-30
15	gb|AY087556.1| Arabidopsis thaliana clone 36616 mRNA, complete s...	141	3e-30
16	gb|BT002345.1| Arabidopsis thaliana clone C104953 unknown protei...	141	3e-30
17	gb|BT004034.1| Arabidopsis thaliana clone RAFL15-43-C20 (R20900)...	137	5e-29
18	gb|AF434762.1|AF434762 Arabidopsis thaliana COP9 signalosome sub...	133	7e-28
19	dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D...	127	4e-26
20	dbj|AP003873.2| Oryza sativa (japonica cultivar-group) genomic D...	127	4e-26
21	emb|AL161565.2|ATCHRIV65 Arabidopsis thaliana DNA chromosome 4, ...	80	9e-12
22	emb|AL022223.3|ATM3E9 Arabidopsis thaliana DNA chromosome 4, P1 ...	80	9e-12
23	dbj|AB026656.1| Arabidopsis thaliana genomic DNA, chromosome 5, ...	72	2e-09
24	dbj|AK103987.1| Oryza sativa (japonica cultivar-group) cDNA clon...	50	0.008
25	dbj|AK102645.1| Oryza sativa (japonica cultivar-group) cDNA clon...	50	0.008
26	dbj|AK072851.1| Oryza sativa (japonica cultivar-group) cDNA clon...	50	0.008
27	dbj|AK068389.1| Oryza sativa (japonica cultivar-group) cDNA clon...	50	0.008
28	gb|AC084023.8| Oryza sativa (japonica cultivar-group) chromosome...	46	0.13
29	emb|AL590403.13| Human DNA sequence from clone RP13-459B11 on ch...	46	0.13
30	dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D...	46	0.13
31	dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D...	46	0.13
32	dbj|AK106674.1| Oryza sativa (japonica cultivar-group) cDNA clon...	46	0.13
33	emb|CR392338.16| Zebrafish DNA sequence from clone DKEY-262M9 in...	46	0.13
34	gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome...	46	0.13
35	gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome...	46	0.13
36	emb|AL713945.5|CNS07YPO Oryza sativa chromosome 12, . BAC OJ1727...	46	0.13
37	emb|AL731891.2|CNS08C8V Oryza sativa chromosome 12, . BAC OJ1374...	46	0.13
38	emb|AL356113.8| Human DNA sequence from clone RP11-429A24 on chr...	42	2.0
39	gb|AC063961.10| Homo sapiens chromosome 10 clone RP11-183E9, com...	42	2.0
40	ref|XM_519247.1| PREDICTED: Pan troglodytes similar to COP9 sign...	40	8.1
41	gb|AC162883.4| Mus musculus chromosome 1, clone RP24-148E21, com...	40	8.1
42	gb|AC137610.2| Oryza sativa (japonica cultivar-group) chromosome...	40	8.1
43	gb|AC125518.3| Mus musculus BAC clone RP24-267E6 from chromosome...	40	8.1
44	ref|XM_720855.1| Plasmodium yoelii yoelii str. 17XNL hypothetica...	40	8.1
45	emb|BX572646.11| Zebrafish DNA sequence from clone DKEY-245O11 i...	40	8.1
46	emb|BX537322.5| Zebrafish DNA sequence from clone CH211-80L5 in ...	40	8.1
47	gb|AC146015.4| Pan troglodytes BAC clone RP43-129D8 from chromos...	40	8.1
48	emb|BX510304.12| Mouse DNA sequence from clone RP23-128I6 on chr...	40	8.1
49	dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D...	40	8.1
50	gb|AC136777.8| Homo sapiens chromosome 8, clone RP11-63E5, compl...	40	8.1
51	gb|AC103954.9| Homo sapiens chromosome 8, clone CTA-366D10, comp...	40	8.1
52	gb|AC110274.5| Homo sapiens chromosome 8, clone RP11-161B15, com...	40	8.1
53	emb|AL929093.6| Zebrafish DNA sequence from clone CH211-149P10, ...	40	8.1
54	dbj|AK108098.1| Oryza sativa (japonica cultivar-group) cDNA clon...	40	8.1
55	gb|AC004908.1|AC004908 Homo sapiens PAC clone RP5-855D21, comple...	40	8.1
56	emb|BX465207.14| Zebrafish DNA sequence from clone DKEY-103I16 i...	40	8.1
57	emb|AL929190.3| Zebrafish DNA sequence from clone DKEY-77N11, co...	40	8.1

---

>ref|XM_483183.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1408

 Score =  692 bits (349), Expect = 0.0
 Identities = 521/576 (90%), Gaps = 2/576 (0%)
 Strand = Plus / Plus

                                                                        
Query: 18   ctctgatggnacattaatgnaagccctgtctatcttctcttgaatcctgcaatcaaccac 77
            ||||||||| ||||||| | ||| || || |||||||| ||||||||||||||||||| |
Sbjct: 512  ctctgatgg-acattaacgaaagtcccgtttatcttcttttgaatcctgcaatcaacctc 570

                                                                        
Query: 78   tcccagnaaggatctccctgtaacaatttatgagagtgagttgcatgttatcgatggggg 137
            |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 571  tcccag-aaggatctccctgtaacaatttatgagagtgagttgcatgttatcgatgggag 629

                                                                        
Query: 138  tccacagctcatctttgtcaaatcaaattacacaattgagactgtagaagcagagaggat 197
            ||| |||||||||||||||| | | ||||| ||||||||||||||||| |||||||||||
Sbjct: 630  tccgcagctcatctttgtcagagctaattatacaattgagactgtagaggcagagaggat 689

                                                                        
Query: 198  atctgtagatcatgttgcccatctaaaaccatctgacggtggctctgcagcaactcaatt 257
            |||||| ||||||||||||||||| ||||||||||| ||||||||||| || ||||||||
Sbjct: 690  atctgttgatcatgttgcccatctcaaaccatctgatggtggctctgcggcgactcaatt 749

                                                                        
Query: 258  ggctgctcatcttacaggaatacacagtgccatcaagatgctcaatagcagggttcgtgt 317
            |||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 750  ggctgctcatctgacaggaatacacagtgccatcaagatgctcaatagcagggtccgtgt 809

                                                                        
Query: 318  tatccagcaataccttggtgccatgcaaaagggtgatattccactggataattcacttct 377
            |||||| ||||| |||| | ||||||| || |||||||| |||||||| ||||| || ||
Sbjct: 810  tatccatcaatatcttgtttccatgcagaaaggtgatatgccactggacaattcgctgct 869

                                                                        
Query: 378  taggcaagtctcaagcctcgtaagaagactgccagctatggaatcggagaaattccaaga 437
            |||||||||||||||||| |||||||| || ||||| ||||| || || |||||||||||
Sbjct: 870  taggcaagtctcaagcctagtaagaaggctaccagcaatggagtcagaaaaattccaaga 929

                                                                        
Query: 438  tgatttcttaacggaatacaacgacaccctcctcatgacttaccttgcaatgttcacgaa 497
            ||| ||| ||| ||||||||| |||||||||||||||||||||||||| |||||||| ||
Sbjct: 930  tgacttcctaatggaatacaatgacaccctcctcatgacttaccttgctatgttcactaa 989

                                                                        
Query: 498  ctgttcaagcacaatgaacgagttggtcgagaagtttaacaccacgtatgagagatcccc 557
            |||||||||||||||||| ||| ||||||||||||||||| | || || ||||| ||  |
Sbjct: 990  ctgttcaagcacaatgaatgagctggtcgagaagtttaacgcgacatacgagaggtcgac 1049

                                                
Query: 558  tgccaggagaggaggccgaggtgctttcatgtagat 593
            ||||||||||||||||||||||||||||||||||||
Sbjct: 1050 tgccaggagaggaggccgaggtgctttcatgtagat 1085

---

>dbj|AK058215.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-010-D12, full
            insert sequence
          Length = 1408

 Score =  692 bits (349), Expect = 0.0
 Identities = 521/576 (90%), Gaps = 2/576 (0%)
 Strand = Plus / Plus

                                                                        
Query: 18   ctctgatggnacattaatgnaagccctgtctatcttctcttgaatcctgcaatcaaccac 77
            ||||||||| ||||||| | ||| || || |||||||| ||||||||||||||||||| |
Sbjct: 512  ctctgatgg-acattaacgaaagtcccgtttatcttcttttgaatcctgcaatcaacctc 570

                                                                        
Query: 78   tcccagnaaggatctccctgtaacaatttatgagagtgagttgcatgttatcgatggggg 137
            |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 571  tcccag-aaggatctccctgtaacaatttatgagagtgagttgcatgttatcgatgggag 629

                                                                        
Query: 138  tccacagctcatctttgtcaaatcaaattacacaattgagactgtagaagcagagaggat 197
            ||| |||||||||||||||| | | ||||| ||||||||||||||||| |||||||||||
Sbjct: 630  tccgcagctcatctttgtcagagctaattatacaattgagactgtagaggcagagaggat 689

                                                                        
Query: 198  atctgtagatcatgttgcccatctaaaaccatctgacggtggctctgcagcaactcaatt 257
            |||||| ||||||||||||||||| ||||||||||| ||||||||||| || ||||||||
Sbjct: 690  atctgttgatcatgttgcccatctcaaaccatctgatggtggctctgcggcgactcaatt 749

                                                                        
Query: 258  ggctgctcatcttacaggaatacacagtgccatcaagatgctcaatagcagggttcgtgt 317
            |||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 750  ggctgctcatctgacaggaatacacagtgccatcaagatgctcaatagcagggtccgtgt 809

                                                                        
Query: 318  tatccagcaataccttggtgccatgcaaaagggtgatattccactggataattcacttct 377
            |||||| ||||| |||| | ||||||| || |||||||| |||||||| ||||| || ||
Sbjct: 810  tatccatcaatatcttgtttccatgcagaaaggtgatatgccactggacaattcgctgct 869

                                                                        
Query: 378  taggcaagtctcaagcctcgtaagaagactgccagctatggaatcggagaaattccaaga 437
            |||||||||||||||||| |||||||| || ||||| ||||| || || |||||||||||
Sbjct: 870  taggcaagtctcaagcctagtaagaaggctaccagcaatggagtcagaaaaattccaaga 929

                                                                        
Query: 438  tgatttcttaacggaatacaacgacaccctcctcatgacttaccttgcaatgttcacgaa 497
            ||| ||| ||| ||||||||| |||||||||||||||||||||||||| |||||||| ||
Sbjct: 930  tgacttcctaatggaatacaatgacaccctcctcatgacttaccttgctatgttcactaa 989

                                                                        
Query: 498  ctgttcaagcacaatgaacgagttggtcgagaagtttaacaccacgtatgagagatcccc 557
            |||||||||||||||||| ||| ||||||||||||||||| | || || ||||| ||  |
Sbjct: 990  ctgttcaagcacaatgaatgagctggtcgagaagtttaacgcgacatacgagaggtcgac 1049

                                                
Query: 558  tgccaggagaggaggccgaggtgctttcatgtagat 593
            ||||||||||||||||||||||||||||||||||||
Sbjct: 1050 tgccaggagaggaggccgaggtgctttcatgtagat 1085

---

>emb|AM234671.1| Oryza sativa mRNA for COP9 signalosome subunit 6 (csn6 gene)
          Length = 1408

 Score =  692 bits (349), Expect = 0.0
 Identities = 521/576 (90%), Gaps = 2/576 (0%)
 Strand = Plus / Plus

                                                                        
Query: 18   ctctgatggnacattaatgnaagccctgtctatcttctcttgaatcctgcaatcaaccac 77
            ||||||||| ||||||| | ||| || || |||||||| ||||||||||||||||||| |
Sbjct: 512  ctctgatgg-acattaacgaaagtcccgtttatcttcttttgaatcctgcaatcaacctc 570

                                                                        
Query: 78   tcccagnaaggatctccctgtaacaatttatgagagtgagttgcatgttatcgatggggg 137
            |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 571  tcccag-aaggatctccctgtaacaatttatgagagtgagttgcatgttatcgatgggag 629

                                                                        
Query: 138  tccacagctcatctttgtcaaatcaaattacacaattgagactgtagaagcagagaggat 197
            ||| |||||||||||||||| | | ||||| ||||||||||||||||| |||||||||||
Sbjct: 630  tccgcagctcatctttgtcagagctaattatacaattgagactgtagaggcagagaggat 689

                                                                        
Query: 198  atctgtagatcatgttgcccatctaaaaccatctgacggtggctctgcagcaactcaatt 257
            |||||| ||||||||||||||||| ||||||||||| ||||||||||| || ||||||||
Sbjct: 690  atctgttgatcatgttgcccatctcaaaccatctgatggtggctctgcggcgactcaatt 749

                                                                        
Query: 258  ggctgctcatcttacaggaatacacagtgccatcaagatgctcaatagcagggttcgtgt 317
            |||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 750  ggctgctcatctgacaggaatacacagtgccatcaagatgctcaatagcagggtccgtgt 809

                                                                        
Query: 318  tatccagcaataccttggtgccatgcaaaagggtgatattccactggataattcacttct 377
            |||||| ||||| |||| | ||||||| || |||||||| |||||||| ||||| || ||
Sbjct: 810  tatccatcaatatcttgtttccatgcagaaaggtgatatgccactggacaattcgctgct 869

                                                                        
Query: 378  taggcaagtctcaagcctcgtaagaagactgccagctatggaatcggagaaattccaaga 437
            |||||||||||||||||| |||||||| || ||||| ||||| || || |||||||||||
Sbjct: 870  taggcaagtctcaagcctagtaagaaggctaccagcaatggagtcagaaaaattccaaga 929

                                                                        
Query: 438  tgatttcttaacggaatacaacgacaccctcctcatgacttaccttgcaatgttcacgaa 497
            ||| ||| ||| ||||||||| |||||||||||||||||||||||||| |||||||| ||
Sbjct: 930  tgacttcctaatggaatacaatgacaccctcctcatgacttaccttgctatgttcactaa 989

                                                                        
Query: 498  ctgttcaagcacaatgaacgagttggtcgagaagtttaacaccacgtatgagagatcccc 557
            |||||||||||||||||| ||| ||||||||||||||||| | || || ||||| ||  |
Sbjct: 990  ctgttcaagcacaatgaatgagctggtcgagaagtttaacgcgacatacgagaggtcgac 1049

                                                
Query: 558  tgccaggagaggaggccgaggtgctttcatgtagat 593
            ||||||||||||||||||||||||||||||||||||
Sbjct: 1050 tgccaggagaggaggccgaggtgctttcatgtagat 1085

---

>gb|AY104920.1| Zea mays PCO100740 mRNA sequence
          Length = 1562

 Score =  595 bits (300), Expect = e-167
 Identities = 497/562 (88%), Gaps = 1/562 (0%)
 Strand = Plus / Plus

                                                                        
Query: 30   attaatgnaagccctgtctatcttctcttgaatcctgcaatcaaccactcccagnaagga 89
            ||||| | ||||||||| ||||| || || |||||| ||||||||| ||||||  ||| |
Sbjct: 590  attaacgaaagccctgtttatctcctattaaatcctacaatcaacctctcccaaaaag-a 648

                                                                        
Query: 90   tctccctgtaacaatttatgagagtgagttgcatgttatcgatgggggtccacagctcat 149
            ||||||||| || || |||||||||||||||||||| |||||||||  ||| ||||||||
Sbjct: 649  tctccctgtgactatctatgagagtgagttgcatgtcatcgatgggattcctcagctcat 708

                                                                        
Query: 150  ctttgtcaaatcaaattacacaattgagactgtagaagcagagaggatatctgtagatca 209
            ||| |||| ||||||||| ||||||||||||||||| || |||||||||||||| || ||
Sbjct: 709  cttcgtcagatcaaattatacaattgagactgtagaggctgagaggatatctgtggacca 768

                                                                        
Query: 210  tgttgcccatctaaaaccatctgacggtggctctgcagcaactcaattggctgctcatct 269
            |||||||||||| ||||| ||||| |||||||| ||||||||||| ||||||||||||||
Sbjct: 769  tgttgcccatctcaaaccttctgatggtggctcagcagcaactcagttggctgctcatct 828

                                                                        
Query: 270  tacaggaatacacagtgccatcaagatgctcaatagcagggttcgtgttatccagcaata 329
            |||||||||||||||||||||||||||||||||||||||||| ||||||||||| || ||
Sbjct: 829  tacaggaatacacagtgccatcaagatgctcaatagcagggtccgtgttatccatcagta 888

                                                                        
Query: 330  ccttggtgccatgcaaaagggtgatattccactggataattcacttcttaggcaagtctc 389
             |||| |||||||||||| ||||| |||||| |||| ||||| || ||||||||||||||
Sbjct: 889  tcttgttgccatgcaaaaaggtgacattccaatggacaattcgctgcttaggcaagtctc 948

                                                                        
Query: 390  aagcctcgtaagaagactgccagctatggaatcggagaaattccaagatgatttcttaac 449
            |||||| |||||||| || || |||| ||||||  |||||||||||||||| || |||| 
Sbjct: 949  aagccttgtaagaaggctaccggctacggaatcacagaaattccaagatgactttttaat 1008

                                                                        
Query: 450  ggaatacaacgacaccctcctcatgacttaccttgcaatgttcacgaactgttcaagcac 509
            ||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 1009 ggaatacaacgacactctcctcatgacttacctggcaatgttcactaactgttcaagcac 1068

                                                                        
Query: 510  aatgaacgagttggtcgagaagtttaacaccacgtatgagagatcccctgccaggagagg 569
            |||||| ||||||||||||||  | ||||| |  ||||||||| |  || ||||||||||
Sbjct: 1069 aatgaatgagttggtcgagaaaatcaacacaagctatgagagaccgactaccaggagagg 1128

                                  
Query: 570  aggccgaggtgctttcatgtag 591
            ||||||||||||||||||||||
Sbjct: 1129 aggccgaggtgctttcatgtag 1150

---

>gb|BT017731.1| Zea mays clone EL01N0448B12.c mRNA sequence
          Length = 1383

 Score =  587 bits (296), Expect = e-164
 Identities = 496/562 (88%), Gaps = 1/562 (0%)
 Strand = Plus / Plus

                                                                        
Query: 30   attaatgnaagccctgtctatcttctcttgaatcctgcaatcaaccactcccagnaagga 89
            ||||| | ||||||||| ||||| || || |||||| ||||||||| ||||||  ||| |
Sbjct: 510  attaacgaaagccctgtttatctcctattaaatcctacaatcaacctctcccaaaaag-a 568

                                                                        
Query: 90   tctccctgtaacaatttatgagagtgagttgcatgttatcgatgggggtccacagctcat 149
            ||||||||| || || |||||||||||||||||||| |||||||||  ||| ||||||||
Sbjct: 569  tctccctgtgactatctatgagagtgagttgcatgtcatcgatgggattcctcagctcat 628

                                                                        
Query: 150  ctttgtcaaatcaaattacacaattgagactgtagaagcagagaggatatctgtagatca 209
            ||| |||| ||||||||| ||||||||||||||||| || |||||||||||||| || ||
Sbjct: 629  cttcgtcagatcaaattatacaattgagactgtagaggctgagaggatatctgtggacca 688

                                                                        
Query: 210  tgttgcccatctaaaaccatctgacggtggctctgcagcaactcaattggctgctcatct 269
            |||||||||||| ||||| ||||| |||||||| ||||||||||| ||||||||||||||
Sbjct: 689  tgttgcccatctcaaaccttctgatggtggctcagcagcaactcagttggctgctcatct 748

                                                                        
Query: 270  tacaggaatacacagtgccatcaagatgctcaatagcagggttcgtgttatccagcaata 329
            |||||||||||||||||||||||||||||||||||||||||| ||||||||||| || ||
Sbjct: 749  tacaggaatacacagtgccatcaagatgctcaatagcagggtccgtgttatccatcagta 808

                                                                        
Query: 330  ccttggtgccatgcaaaagggtgatattccactggataattcacttcttaggcaagtctc 389
             || | |||||||||||| ||||| |||||| | |||||||| || ||||||||||||||
Sbjct: 809  tctcgttgccatgcaaaaaggtgacattccattagataattcgctgcttaggcaagtctc 868

                                                                        
Query: 390  aagcctcgtaagaagactgccagctatggaatcggagaaattccaagatgatttcttaac 449
            ||||||||||||||| || ||||||||||| ||  ||||||||||||| || ||||||| 
Sbjct: 869  aagcctcgtaagaaggctaccagctatggagtcacagaaattccaagacgacttcttaat 928

                                                                        
Query: 450  ggaatacaacgacaccctcctcatgacttaccttgcaatgttcacgaactgttcaagcac 509
            ||||||||||||||| ||||||||||| |||||||||||| |||| || |||||||||||
Sbjct: 929  ggaatacaacgacactctcctcatgacctaccttgcaatggtcactaaatgttcaagcac 988

                                                                        
Query: 510  aatgaacgagttggtcgagaagtttaacaccacgtatgagagatcccctgccaggagagg 569
            |||||||||||||||||||||| | ||||| |  ||||||||| |  ||  |||||||||
Sbjct: 989  aatgaacgagttggtcgagaagataaacacgagctatgagagaacgactagcaggagagg 1048

                                  
Query: 570  aggccgaggtgctttcatgtag 591
            ||| ||||||||||||||||||
Sbjct: 1049 aggtcgaggtgctttcatgtag 1070



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 561  caggagaggaggccgaggtgc 581
            |||||||||||||||||||||
Sbjct: 1182 caggagaggaggccgaggtgc 1202

---

>ref|NM_118776.2| Arabidopsis thaliana CSN6B AT4G26430 (CSN6B) mRNA, complete cds
          Length = 1467

 Score =  141 bits (71), Expect = 3e-30
 Identities = 125/143 (87%)
 Strand = Plus / Plus

                                                                       
Query: 166 tacacaattgagactgtagaagcagagaggatatctgtagatcatgttgcccatctaaaa 225
           |||||||||||||| || ||||| || || |||||||| ||||||||||| ||||| || 
Sbjct: 769 tacacaattgagacagttgaagctgaaagaatatctgttgatcatgttgcacatcttaag 828

                                                                       
Query: 226 ccatctgacggtggctctgcagcaactcaattggctgctcatcttacaggaatacacagt 285
           |||||||| || ||||| || || ||||| ||||||||||||||||| |||||||| |||
Sbjct: 829 ccatctgatggaggctcagctgcgactcagttggctgctcatcttactggaatacatagt 888

                                  
Query: 286 gccatcaagatgctcaatagcag 308
           |||||||||||||| ||||||||
Sbjct: 889 gccatcaagatgcttaatagcag 911

---

>ref|NM_125011.2| Arabidopsis thaliana CSN6A AT5G56280 (CSN6A) mRNA, complete cds
          Length = 1216

 Score =  141 bits (71), Expect = 3e-30
 Identities = 125/143 (87%)
 Strand = Plus / Plus

                                                                       
Query: 166 tacacaattgagactgtagaagcagagaggatatctgtagatcatgttgcccatctaaaa 225
           |||||||| ||||| || ||||| ||  ||||||| || ||||||||||| ||||| |||
Sbjct: 561 tacacaatcgagacagttgaagctgaacggatatcagttgatcatgttgcacatcttaaa 620

                                                                       
Query: 226 ccatctgacggtggctctgcagcaactcaattggctgctcatcttacaggaatacacagt 285
           ||||||||||| ||||| |||||||| || ||||||||||||||||| || ||||| |||
Sbjct: 621 ccatctgacggaggctcagcagcaacccagttggctgctcatcttactggtatacatagt 680

                                  
Query: 286 gccatcaagatgctcaatagcag 308
           |||||||||||||| ||||||||
Sbjct: 681 gccatcaagatgcttaatagcag 703

---

>gb|AY080638.1| Arabidopsis thaliana unknown protein (At4g26430) mRNA, partial cds
          Length = 965

 Score =  141 bits (71), Expect = 3e-30
 Identities = 125/143 (87%)
 Strand = Plus / Plus

                                                                       
Query: 166 tacacaattgagactgtagaagcagagaggatatctgtagatcatgttgcccatctaaaa 225
           |||||||||||||| || ||||| || || |||||||| ||||||||||| ||||| || 
Sbjct: 250 tacacaattgagacagttgaagctgaaagaatatctgttgatcatgttgcacatcttaag 309

                                                                       
Query: 226 ccatctgacggtggctctgcagcaactcaattggctgctcatcttacaggaatacacagt 285
           |||||||| || ||||| || || ||||| ||||||||||||||||| |||||||| |||
Sbjct: 310 ccatctgatggaggctcagctgcgactcagttggctgctcatcttactggaatacatagt 369

                                  
Query: 286 gccatcaagatgctcaatagcag 308
           |||||||||||||| ||||||||
Sbjct: 370 gccatcaagatgcttaatagcag 392

---

>gb|AF395064.1|AF395064 Arabidopsis thaliana CSN complex subunit 6B (CSN6B) mRNA, complete
           cds
          Length = 966

 Score =  141 bits (71), Expect = 3e-30
 Identities = 125/143 (87%)
 Strand = Plus / Plus

                                                                       
Query: 166 tacacaattgagactgtagaagcagagaggatatctgtagatcatgttgcccatctaaaa 225
           |||||||||||||| || ||||| || || |||||||| ||||||||||| ||||| || 
Sbjct: 532 tacacaattgagacagttgaagctgaaagaatatctgttgatcatgttgcacatcttaag 591

                                                                       
Query: 226 ccatctgacggtggctctgcagcaactcaattggctgctcatcttacaggaatacacagt 285
           |||||||| || ||||| || || ||||| ||||||||||||||||| |||||||| |||
Sbjct: 592 ccatctgatggaggctcagctgcgactcagttggctgctcatcttactggaatacatagt 651

                                  
Query: 286 gccatcaagatgctcaatagcag 308
           |||||||||||||| ||||||||
Sbjct: 652 gccatcaagatgcttaatagcag 674

---

>gb|AF395063.1|AF395063 Arabidopsis thaliana CSN complex subunit 6A (CSN6A) mRNA, complete
           cds
          Length = 962

 Score =  141 bits (71), Expect = 3e-30
 Identities = 125/143 (87%)
 Strand = Plus / Plus

                                                                       
Query: 166 tacacaattgagactgtagaagcagagaggatatctgtagatcatgttgcccatctaaaa 225
           |||||||| ||||| || ||||| ||  ||||||| || ||||||||||| ||||| |||
Sbjct: 532 tacacaatcgagacagttgaagctgaacggatatcagttgatcatgttgcacatcttaaa 591

                                                                       
Query: 226 ccatctgacggtggctctgcagcaactcaattggctgctcatcttacaggaatacacagt 285
           ||||||||||| ||||| |||||||| || ||||||||||||||||| || ||||| |||
Sbjct: 592 ccatctgacggaggctcagcagcaacccagttggctgctcatcttactggtatacatagt 651

                                  
Query: 286 gccatcaagatgctcaatagcag 308
           |||||||||||||| ||||||||
Sbjct: 652 gccatcaagatgcttaatagcag 674

---

>gb|AY048692.1| Arabidopsis thaliana COP9 complex subunit 6 mRNA, complete cds
          Length = 1250

 Score =  141 bits (71), Expect = 3e-30
 Identities = 125/143 (87%)
 Strand = Plus / Plus

                                                                       
Query: 166 tacacaattgagactgtagaagcagagaggatatctgtagatcatgttgcccatctaaaa 225
           |||||||| ||||| || ||||| ||  ||||||| || ||||||||||| ||||| |||
Sbjct: 573 tacacaatcgagacagttgaagctgaacggatatcagttgatcatgttgcacatcttaaa 632

                                                                       
Query: 226 ccatctgacggtggctctgcagcaactcaattggctgctcatcttacaggaatacacagt 285
           ||||||||||| ||||| |||||||| || ||||||||||||||||| || ||||| |||
Sbjct: 633 ccatctgacggaggctcagcagcaacccagttggctgctcatcttactggtatacatagt 692

                                  
Query: 286 gccatcaagatgctcaatagcag 308
           |||||||||||||| ||||||||
Sbjct: 693 gccatcaagatgcttaatagcag 715

---

>emb|BX826563.1|CNS0A38W Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB40ZG04 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1186

 Score =  141 bits (71), Expect = 3e-30
 Identities = 125/143 (87%)
 Strand = Plus / Plus

                                                                       
Query: 166 tacacaattgagactgtagaagcagagaggatatctgtagatcatgttgcccatctaaaa 225
           |||||||||||||| || ||||| || || |||||||| ||||||||||| ||||| || 
Sbjct: 567 tacacaattgagacagttgaagctgaaagaatatctgttgatcatgttgcacatcttaag 626

                                                                       
Query: 226 ccatctgacggtggctctgcagcaactcaattggctgctcatcttacaggaatacacagt 285
           |||||||| || ||||| || || ||||| ||||||||||||||||| |||||||| |||
Sbjct: 627 ccatctgatggaggctcagctgcgactcagttggctgctcatcttactggaatacatagt 686

                                  
Query: 286 gccatcaagatgctcaatagcag 308
           |||||||||||||| ||||||||
Sbjct: 687 gccatcaagatgcttaatagcag 709

---

>emb|BX831835.1|CNS0A107 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH32ZC09 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1119

 Score =  141 bits (71), Expect = 3e-30
 Identities = 125/143 (87%)
 Strand = Plus / Plus

                                                                       
Query: 166 tacacaattgagactgtagaagcagagaggatatctgtagatcatgttgcccatctaaaa 225
           |||||||| ||||| || ||||| ||  ||||||| || ||||||||||| ||||| |||
Sbjct: 563 tacacaatcgagacagttgaagctgaacggatatcagttgatcatgttgcacatcttaaa 622

                                                                       
Query: 226 ccatctgacggtggctctgcagcaactcaattggctgctcatcttacaggaatacacagt 285
           ||||||||||| ||||| |||||||| || ||||||||||||||||| || ||||| |||
Sbjct: 623 ccatctgacggaggctcagcagcaacccagttggctgctcatcttactggtatacatagt 682

                                  
Query: 286 gccatcaagatgctcaatagcag 308
           |||||||||||||| ||||||||
Sbjct: 683 gccatcaagatgcttaatagcag 705

---

>emb|BX832027.1|CNS09YTR Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH47ZC11 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1041

 Score =  141 bits (71), Expect = 3e-30
 Identities = 125/143 (87%)
 Strand = Plus / Plus

                                                                       
Query: 166 tacacaattgagactgtagaagcagagaggatatctgtagatcatgttgcccatctaaaa 225
           |||||||| ||||| || ||||| ||  ||||||| || ||||||||||| ||||| |||
Sbjct: 402 tacacaatcgagacagttgaagctgaacggatatcagttgatcatgttgcacatcttaaa 461

                                                                       
Query: 226 ccatctgacggtggctctgcagcaactcaattggctgctcatcttacaggaatacacagt 285
           ||||||||||| ||||| |||||||| || ||||||||||||||||| || ||||| |||
Sbjct: 462 ccatctgacggaggctcagcagcaacccagttggctgctcatcttactggtatacatagt 521

                                  
Query: 286 gccatcaagatgctcaatagcag 308
           |||||||||||||| ||||||||
Sbjct: 522 gccatcaagatgcttaatagcag 544

---

>gb|AY087556.1| Arabidopsis thaliana clone 36616 mRNA, complete sequence
          Length = 1194

 Score =  141 bits (71), Expect = 3e-30
 Identities = 125/143 (87%)
 Strand = Plus / Plus

                                                                       
Query: 166 tacacaattgagactgtagaagcagagaggatatctgtagatcatgttgcccatctaaaa 225
           |||||||||||||| || ||||| || || |||||||| ||||||||||| ||||| || 
Sbjct: 539 tacacaattgagacagttgaagctgaaagaatatctgttgatcatgttgcacatcttaag 598

                                                                       
Query: 226 ccatctgacggtggctctgcagcaactcaattggctgctcatcttacaggaatacacagt 285
           |||||||| || ||||| || || ||||| ||||||||||||||||| |||||||| |||
Sbjct: 599 ccatctgatggaggctcagctgcgactcagttggctgctcatcttactggaatacatagt 658

                                  
Query: 286 gccatcaagatgctcaatagcag 308
           |||||||||||||| ||||||||
Sbjct: 659 gccatcaagatgcttaatagcag 681

---

>gb|BT002345.1| Arabidopsis thaliana clone C104953 unknown protein (At4g26430)
           mRNA, complete cds
          Length = 985

 Score =  141 bits (71), Expect = 3e-30
 Identities = 125/143 (87%)
 Strand = Plus / Plus

                                                                       
Query: 166 tacacaattgagactgtagaagcagagaggatatctgtagatcatgttgcccatctaaaa 225
           |||||||||||||| || ||||| || || |||||||| ||||||||||| ||||| || 
Sbjct: 532 tacacaattgagacagttgaagctgaaagaatatctgttgatcatgttgcacatcttaag 591

                                                                       
Query: 226 ccatctgacggtggctctgcagcaactcaattggctgctcatcttacaggaatacacagt 285
           |||||||| || ||||| || || ||||| ||||||||||||||||| |||||||| |||
Sbjct: 592 ccatctgatggaggctcagctgcgactcagttggctgctcatcttactggaatacatagt 651

                                  
Query: 286 gccatcaagatgctcaatagcag 308
           |||||||||||||| ||||||||
Sbjct: 652 gccatcaagatgcttaatagcag 674

---

>gb|BT004034.1| Arabidopsis thaliana clone RAFL15-43-C20 (R20900) putative COP9
           complex subunit 6 CSN6 (At5g56280) mRNA, partial cds
          Length = 906

 Score =  137 bits (69), Expect = 5e-29
 Identities = 123/141 (87%)
 Strand = Plus / Plus

                                                                       
Query: 166 tacacaattgagactgtagaagcagagaggatatctgtagatcatgttgcccatctaaaa 225
           |||||||| ||||| || ||||| ||  ||||||| || ||||||||||| ||||| |||
Sbjct: 250 tacacaatcgagacagttgaagctgaacggatatcagttgatcatgttgcacatcttaaa 309

                                                                       
Query: 226 ccatctgacggtggctctgcagcaactcaattggctgctcatcttacaggaatacacagt 285
           ||||||||||| ||||| |||||||| || ||||||||||||||||| || ||||| |||
Sbjct: 310 ccatctgacggaggctcagcagcaacccagttggctgctcatcttactggtatacatagt 369

                                
Query: 286 gccatcaagatgctcaatagc 306
           |||||||||||||| ||||||
Sbjct: 370 gccatcaagatgcttaatagc 390

---

>gb|AF434762.1|AF434762 Arabidopsis thaliana COP9 signalosome subunit 6 (CSN6B) mRNA,
           complete cds
          Length = 1208

 Score =  133 bits (67), Expect = 7e-28
 Identities = 124/143 (86%)
 Strand = Plus / Plus

                                                                       
Query: 166 tacacaattgagactgtagaagcagagaggatatctgtagatcatgttgcccatctaaaa 225
           |||||||||||||| || ||||| || || |||||||| ||||||||||| ||||| || 
Sbjct: 769 tacacaattgagacagttgaagctgaaagaatatctgttgatcatgttgcacatcttaag 828

                                                                       
Query: 226 ccatctgacggtggctctgcagcaactcaattggctgctcatcttacaggaatacacagt 285
           |||||||| || ||||| || || |||||  |||||||||||||||| |||||||| |||
Sbjct: 829 ccatctgatggaggctcagctgcgactcaggtggctgctcatcttactggaatacatagt 888

                                  
Query: 286 gccatcaagatgctcaatagcag 308
           |||||||||||||| ||||||||
Sbjct: 889 gccatcaagatgcttaatagcag 911

---

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  127 bits (64), Expect = 4e-26
 Identities = 82/88 (93%)
 Strand = Plus / Minus

                                                                            
Query: 257      tggctgctcatcttacaggaatacacagtgccatcaagatgctcaatagcagggttcgtg 316
                ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 24675155 tggctgctcatctgacaggaatacacagtgccatcaagatgctcaatagcagggtccgtg 24675096

                                            
Query: 317      ttatccagcaataccttggtgccatgca 344
                ||||||| ||||| |||| | |||||||
Sbjct: 24675095 ttatccatcaatatcttgtttccatgca 24675068



 Score =  113 bits (57), Expect = 7e-22
 Identities = 75/81 (92%)
 Strand = Plus / Minus

                                                                            
Query: 176      agactgtagaagcagagaggatatctgtagatcatgttgcccatctaaaaccatctgacg 235
                |||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||| |
Sbjct: 24675339 agactgtagaggcagagaggatatctgttgatcatgttgcccatctcaaaccatctgatg 24675280

                                     
Query: 236      gtggctctgcagcaactcaat 256
                |||||||||| || |||||||
Sbjct: 24675279 gtggctctgcggcgactcaat 24675259



 Score =  105 bits (53), Expect = 2e-19
 Identities = 80/88 (90%), Gaps = 1/88 (1%)
 Strand = Plus / Minus

                                                                            
Query: 28       acattaatgnaagccctgtctatcttctcttgaatcctgcaatcaaccactcccagnaag 87
                ||||||| | ||| || || |||||||| ||||||||||||||||||| ||||||| |||
Sbjct: 24675943 acattaacgaaagtcccgtttatcttcttttgaatcctgcaatcaacctctcccag-aag 24675885

                                            
Query: 88       gatctccctgtaacaatttatgagagtg 115
                ||||||||||||||||||||||||||||
Sbjct: 24675884 gatctccctgtaacaatttatgagagtg 24675857



 Score =  105 bits (53), Expect = 2e-19
 Identities = 80/89 (89%)
 Strand = Plus / Minus

                                                                            
Query: 505      agcacaatgaacgagttggtcgagaagtttaacaccacgtatgagagatcccctgccagg 564
                ||||||||||| ||| ||||||||||||||||| | || || ||||| ||  ||||||||
Sbjct: 24674405 agcacaatgaatgagctggtcgagaagtttaacgcgacatacgagaggtcgactgccagg 24674346

                                             
Query: 565      agaggaggccgaggtgctttcatgtagat 593
                |||||||||||||||||||||||||||||
Sbjct: 24674345 agaggaggccgaggtgctttcatgtagat 24674317



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 81/92 (88%)
 Strand = Plus / Minus

                                                                            
Query: 349      ggtgatattccactggataattcacttcttaggcaagtctcaagcctcgtaagaagactg 408
                |||||||| |||||||| ||||| || |||||||||||||||||||| |||||||| || 
Sbjct: 24674932 ggtgatatgccactggacaattcgctgcttaggcaagtctcaagcctagtaagaaggcta 24674873

                                                
Query: 409      ccagctatggaatcggagaaattccaagatga 440
                ||||| ||||| || || ||||||||||||||
Sbjct: 24674872 ccagcaatggagtcagaaaaattccaagatga 24674841



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 54/57 (94%)
 Strand = Plus / Minus

                                                                         
Query: 450      ggaatacaacgacaccctcctcatgacttaccttgcaatgttcacgaactgttcaag 506
                ||||||||| |||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 24674747 ggaatacaatgacaccctcctcatgacttaccttgctatgttcactaactgttcaag 24674691



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 57/63 (90%)
 Strand = Plus / Minus

                                                                            
Query: 115      gagttgcatgttatcgatgggggtccacagctcatctttgtcaaatcaaattacacaatt 174
                ||||||||||||||||||||| |||| |||||||||||||||| | | ||||| ||||||
Sbjct: 24675480 gagttgcatgttatcgatgggagtccgcagctcatctttgtcagagctaattatacaatt 24675421

                   
Query: 175      gag 177
                |||
Sbjct: 24675420 gag 24675418

---

>dbj|AP003873.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1118_A06
          Length = 92836

 Score =  127 bits (64), Expect = 4e-26
 Identities = 82/88 (93%)
 Strand = Plus / Minus

                                                                         
Query: 257   tggctgctcatcttacaggaatacacagtgccatcaagatgctcaatagcagggttcgtg 316
             ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 47459 tggctgctcatctgacaggaatacacagtgccatcaagatgctcaatagcagggtccgtg 47400

                                         
Query: 317   ttatccagcaataccttggtgccatgca 344
             ||||||| ||||| |||| | |||||||
Sbjct: 47399 ttatccatcaatatcttgtttccatgca 47372



 Score =  113 bits (57), Expect = 7e-22
 Identities = 75/81 (92%)
 Strand = Plus / Minus

                                                                         
Query: 176   agactgtagaagcagagaggatatctgtagatcatgttgcccatctaaaaccatctgacg 235
             |||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||| |
Sbjct: 47643 agactgtagaggcagagaggatatctgttgatcatgttgcccatctcaaaccatctgatg 47584

                                  
Query: 236   gtggctctgcagcaactcaat 256
             |||||||||| || |||||||
Sbjct: 47583 gtggctctgcggcgactcaat 47563



 Score =  105 bits (53), Expect = 2e-19
 Identities = 80/88 (90%), Gaps = 1/88 (1%)
 Strand = Plus / Minus

                                                                         
Query: 28    acattaatgnaagccctgtctatcttctcttgaatcctgcaatcaaccactcccagnaag 87
             ||||||| | ||| || || |||||||| ||||||||||||||||||| ||||||| |||
Sbjct: 48247 acattaacgaaagtcccgtttatcttcttttgaatcctgcaatcaacctctcccag-aag 48189

                                         
Query: 88    gatctccctgtaacaatttatgagagtg 115
             ||||||||||||||||||||||||||||
Sbjct: 48188 gatctccctgtaacaatttatgagagtg 48161



 Score =  105 bits (53), Expect = 2e-19
 Identities = 80/89 (89%)
 Strand = Plus / Minus

                                                                         
Query: 505   agcacaatgaacgagttggtcgagaagtttaacaccacgtatgagagatcccctgccagg 564
             ||||||||||| ||| ||||||||||||||||| | || || ||||| ||  ||||||||
Sbjct: 46709 agcacaatgaatgagctggtcgagaagtttaacgcgacatacgagaggtcgactgccagg 46650

                                          
Query: 565   agaggaggccgaggtgctttcatgtagat 593
             |||||||||||||||||||||||||||||
Sbjct: 46649 agaggaggccgaggtgctttcatgtagat 46621



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 81/92 (88%)
 Strand = Plus / Minus

                                                                         
Query: 349   ggtgatattccactggataattcacttcttaggcaagtctcaagcctcgtaagaagactg 408
             |||||||| |||||||| ||||| || |||||||||||||||||||| |||||||| || 
Sbjct: 47236 ggtgatatgccactggacaattcgctgcttaggcaagtctcaagcctagtaagaaggcta 47177

                                             
Query: 409   ccagctatggaatcggagaaattccaagatga 440
             ||||| ||||| || || ||||||||||||||
Sbjct: 47176 ccagcaatggagtcagaaaaattccaagatga 47145



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 54/57 (94%)
 Strand = Plus / Minus

                                                                      
Query: 450   ggaatacaacgacaccctcctcatgacttaccttgcaatgttcacgaactgttcaag 506
             ||||||||| |||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 47051 ggaatacaatgacaccctcctcatgacttaccttgctatgttcactaactgttcaag 46995



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 57/63 (90%)
 Strand = Plus / Minus

                                                                         
Query: 115   gagttgcatgttatcgatgggggtccacagctcatctttgtcaaatcaaattacacaatt 174
             ||||||||||||||||||||| |||| |||||||||||||||| | | ||||| ||||||
Sbjct: 47784 gagttgcatgttatcgatgggagtccgcagctcatctttgtcagagctaattatacaatt 47725

                
Query: 175   gag 177
             |||
Sbjct: 47724 gag 47722

---

>emb|AL161565.2|ATCHRIV65 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 65
          Length = 198320

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 49/52 (94%)
 Strand = Plus / Plus

                                                                 
Query: 257   tggctgctcatcttacaggaatacacagtgccatcaagatgctcaatagcag 308
             |||||||||||||||| |||||||| ||||||||||||||||| ||||||||
Sbjct: 53471 tggctgctcatcttactggaatacatagtgccatcaagatgcttaatagcag 53522



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                            
Query: 196   atatctgtagatcatgttgcccatctaaaaccatctgacggtggctc 242
             |||||||| ||||||||||| ||||| || |||||||| || |||||
Sbjct: 53319 atatctgttgatcatgttgcacatcttaagccatctgatggaggctc 53365

---

>emb|AL022223.3|ATM3E9 Arabidopsis thaliana DNA chromosome 4, P1 clone M3E9 (ESSA project)
          Length = 80677

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 49/52 (94%)
 Strand = Plus / Minus

                                                                 
Query: 257   tggctgctcatcttacaggaatacacagtgccatcaagatgctcaatagcag 308
             |||||||||||||||| |||||||| ||||||||||||||||| ||||||||
Sbjct: 52937 tggctgctcatcttactggaatacatagtgccatcaagatgcttaatagcag 52886



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                            
Query: 196   atatctgtagatcatgttgcccatctaaaaccatctgacggtggctc 242
             |||||||| ||||||||||| ||||| || |||||||| || |||||
Sbjct: 53089 atatctgttgatcatgttgcacatcttaagccatctgatggaggctc 53043

---

>dbj|AB026656.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MXK23
          Length = 9670

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 48/52 (92%)
 Strand = Plus / Minus

                                                                
Query: 257  tggctgctcatcttacaggaatacacagtgccatcaagatgctcaatagcag 308
            |||||||||||||||| || ||||| ||||||||||||||||| ||||||||
Sbjct: 7123 tggctgctcatcttactggtatacatagtgccatcaagatgcttaatagcag 7072



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 52/58 (89%)
 Strand = Plus / Minus

                                                                      
Query: 194  ggatatctgtagatcatgttgcccatctaaaaccatctgacggtggctctgcagcaac 251
            ||||||| || ||||||||||| ||||| |||||||||||||| ||||| ||||||||
Sbjct: 7267 ggatatcagttgatcatgttgcacatcttaaaccatctgacggaggctcagcagcaac 7210

---

>dbj|AK103987.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-H11, full
           insert sequence
          Length = 1773

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 174 tgagactgtagaagcagagaggatatctgtaga 206
           |||||||||||| ||||||||||||||| ||||
Sbjct: 695 tgagactgtagaggcagagaggatatctttaga 727

---

>dbj|AK102645.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033100G22, full
           insert sequence
          Length = 1644

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 174 tgagactgtagaagcagagaggatatctgtaga 206
           |||||||||||| ||||||||||||||| ||||
Sbjct: 699 tgagactgtagaggcagagaggatatctttaga 731

---

>dbj|AK072851.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023135N05, full
           insert sequence
          Length = 1782

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 174 tgagactgtagaagcagagaggatatctgtaga 206
           |||||||||||| ||||||||||||||| ||||
Sbjct: 738 tgagactgtagaggcagagaggatatctttaga 770

---

>dbj|AK068389.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013146P10, full
            insert sequence
          Length = 2207

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                             
Query: 174  tgagactgtagaagcagagaggatatctgtaga 206
            |||||||||||| ||||||||||||||| ||||
Sbjct: 1129 tgagactgtagaggcagagaggatatctttaga 1161

---

>gb|AC084023.8| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0062C05
              map S21174S, complete sequence
          Length = 178867

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 54/63 (85%), Gaps = 1/63 (1%)
 Strand = Plus / Plus

                                                                          
Query: 48     tatcttctcttgaatcctgcaatcaaccactcccagnaaggatctccctgtaacaattta 107
              |||||||| || |||||||||||||||   |||||| |||||| ||||||| || |||||
Sbjct: 148037 tatcttctattaaatcctgcaatcaacttttcccag-aaggatatccctgtgactattta 148095

                 
Query: 108    tga 110
              |||
Sbjct: 148096 tga 148098

---

>emb|AL590403.13| Human DNA sequence from clone RP13-459B11 on chromosome 6 Contains the
             GRM4 gene for glutamate receptor (metabotropic 4) and a
             CpG island, complete sequence
          Length = 118771

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 553   tcccctgccaggagaggaggccg 575
             |||||||||||||||||||||||
Sbjct: 58704 tcccctgccaggagaggaggccg 58726



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 553   tcccctgccaggagaggaggc 573
             |||||||||||||||||||||
Sbjct: 58639 tcccctgccaggagaggaggc 58659

---

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                               
Query: 176      agactgtagaagcagagaggatatctgtaga 206
                |||||||||| ||||||||||||||| ||||
Sbjct: 26586587 agactgtagaggcagagaggatatctttaga 26586617



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                                
Query: 180      tgtagaagcagagaggatatctgtagatcatg 211
                ||||| |||||||||||||||| |||| ||||
Sbjct: 26635727 tgtaggagcagagaggatatctttagaccatg 26635758

---

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 54/63 (85%), Gaps = 1/63 (1%)
 Strand = Plus / Plus

                                                                            
Query: 48       tatcttctcttgaatcctgcaatcaaccactcccagnaaggatctccctgtaacaattta 107
                |||||||| || |||||||||||||||   |||||| |||||| ||||||| || |||||
Sbjct: 18850301 tatcttctattaaatcctgcaatcaacttttcccag-aaggatatccctgtgactattta 18850359

                   
Query: 108      tga 110
                |||
Sbjct: 18850360 tga 18850362

---

>dbj|AK106674.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-114-A05, full
           insert sequence
          Length = 1645

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                  
Query: 173 ttgagactgtagaagcagagaggatatctgtagatcatg 211
           |||||| ||||| |||||||||||||||| |||| ||||
Sbjct: 598 ttgagattgtaggagcagagaggatatctttagaccatg 636

---

>emb|CR392338.16| Zebrafish DNA sequence from clone DKEY-262M9 in linkage group 3,
             complete sequence
          Length = 138425

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 310   gttcgtgttatccagcaatacct 332
             |||||||||||||||||||||||
Sbjct: 77749 gttcgtgttatccagcaatacct 77771

---

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 54/63 (85%), Gaps = 1/63 (1%)
 Strand = Plus / Plus

                                                                            
Query: 48       tatcttctcttgaatcctgcaatcaaccactcccagnaaggatctccctgtaacaattta 107
                |||||||| || |||||||||||||||   |||||| |||||| ||||||| || |||||
Sbjct: 18861555 tatcttctattaaatcctgcaatcaacttttcccag-aaggatatccctgtgactattta 18861613

                   
Query: 108      tga 110
                |||
Sbjct: 18861614 tga 18861616

---

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                               
Query: 176      agactgtagaagcagagaggatatctgtaga 206
                |||||||||| ||||||||||||||| ||||
Sbjct: 26514756 agactgtagaggcagagaggatatctttaga 26514786



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                                
Query: 180      tgtagaagcagagaggatatctgtagatcatg 211
                ||||| |||||||||||||||| |||| ||||
Sbjct: 26563896 tgtaggagcagagaggatatctttagaccatg 26563927

---

>emb|AL713945.5|CNS07YPO Oryza sativa chromosome 12, . BAC OJ1727_H11 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 85710

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                            
Query: 176   agactgtagaagcagagaggatatctgtaga 206
             |||||||||| ||||||||||||||| ||||
Sbjct: 56592 agactgtagaggcagagaggatatctttaga 56622

---

>emb|AL731891.2|CNS08C8V Oryza sativa chromosome 12, . BAC OJ1374_A04 of library Monsanto from
            chromosome 12 of cultivar Nipponbare of ssp. japonica of
            Oryza sativa (rice), complete sequence
          Length = 101173

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                           
Query: 176  agactgtagaagcagagaggatatctgtaga 206
            |||||||||| ||||||||||||||| ||||
Sbjct: 5457 agactgtagaggcagagaggatatctttaga 5487



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 180   tgtagaagcagagaggatatctgtagatcatg 211
             ||||| |||||||||||||||| |||| ||||
Sbjct: 54597 tgtaggagcagagaggatatctttagaccatg 54628

---

>emb|AL356113.8| Human DNA sequence from clone RP11-429A24 on chromosome 10 Contains
             part of a novel gene (DKFZp761L0424) (KIAA1217) and three
             novel genes (FLJ11983 FLJ14139), complete sequence
          Length = 190429

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 173   ttgagactgtagaagcagaga 193
             |||||||||||||||||||||
Sbjct: 18936 ttgagactgtagaagcagaga 18956

---

>gb|AC063961.10| Homo sapiens chromosome 10 clone RP11-183E9, complete sequence
          Length = 147202

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 173   ttgagactgtagaagcagaga 193
             |||||||||||||||||||||
Sbjct: 44453 ttgagactgtagaagcagaga 44433

---

>ref|XM_519247.1| PREDICTED: Pan troglodytes similar to COP9 signalosome subunit 6;
           H_NH0506M12.12; COP9 subunit 6; MOV34 homolog, 34 kD
           (LOC463587), mRNA
          Length = 936

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 280 cacagtgccatcaagatgct 299
           ||||||||||||||||||||
Sbjct: 625 cacagtgccatcaagatgct 644

---

>gb|AC162883.4| Mus musculus chromosome 1, clone RP24-148E21, complete sequence
          Length = 154199

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 140    cacagctcatctttgtcaaa 159
              ||||||||||||||||||||
Sbjct: 130185 cacagctcatctttgtcaaa 130204

---

>gb|AC137610.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone
              OSJNBa0018H09, complete sequence
          Length = 155329

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 53     tctcttgaatcctgcaatca 72
              ||||||||||||||||||||
Sbjct: 117283 tctcttgaatcctgcaatca 117264

---

>gb|AC125518.3| Mus musculus BAC clone RP24-267E6 from chromosome 1, complete sequence
          Length = 174190

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 239   gctctgcagcaactcaattg 258
             ||||||||||||||||||||
Sbjct: 55941 gctctgcagcaactcaattg 55922

---

>ref|XM_720855.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY05483)
           partial mRNA
          Length = 1077

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 288 catcaagatgctcaatagca 307
           ||||||||||||||||||||
Sbjct: 127 catcaagatgctcaatagca 108

---

>emb|BX572646.11| Zebrafish DNA sequence from clone DKEY-245O11 in linkage group 18,
             complete sequence
          Length = 116953

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 427   aaattccaagatgatttctt 446
             ||||||||||||||||||||
Sbjct: 40843 aaattccaagatgatttctt 40824

---

>emb|BX537322.5| Zebrafish DNA sequence from clone CH211-80L5 in linkage group 1,
             complete sequence
          Length = 65076

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 461   acaccctcctcatgacttac 480
             ||||||||||||||||||||
Sbjct: 49701 acaccctcctcatgacttac 49720

---

>gb|AC146015.4| Pan troglodytes BAC clone RP43-129D8 from chromosome 7, complete sequence
          Length = 151463

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 280    cacagtgccatcaagatgct 299
              ||||||||||||||||||||
Sbjct: 108245 cacagtgccatcaagatgct 108264

---

>emb|BX510304.12| Mouse DNA sequence from clone RP23-128I6 on chromosome 2, complete
             sequence
          Length = 160779

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 288   catcaagatgctcaatagca 307
             ||||||||||||||||||||
Sbjct: 21260 catcaagatgctcaatagca 21241

---

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 53       tctcttgaatcctgcaatca 72
                ||||||||||||||||||||
Sbjct: 11215029 tctcttgaatcctgcaatca 11215010

---

>gb|AC136777.8| Homo sapiens chromosome 8, clone RP11-63E5, complete sequence
          Length = 175263

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 426    gaaattccaagatgatttct 445
              ||||||||||||||||||||
Sbjct: 129976 gaaattccaagatgatttct 129995

---

>gb|AC103954.9| Homo sapiens chromosome 8, clone CTA-366D10, complete sequence
          Length = 169754

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 426    gaaattccaagatgatttct 445
              ||||||||||||||||||||
Sbjct: 122442 gaaattccaagatgatttct 122461

---

>gb|AC110274.5| Homo sapiens chromosome 8, clone RP11-161B15, complete sequence
          Length = 152802

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 426   gaaattccaagatgatttct 445
             ||||||||||||||||||||
Sbjct: 23703 gaaattccaagatgatttct 23722

---

>emb|AL929093.6| Zebrafish DNA sequence from clone CH211-149P10, complete sequence
          Length = 177248

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 461    acaccctcctcatgacttac 480
              ||||||||||||||||||||
Sbjct: 162707 acaccctcctcatgacttac 162688

---

>dbj|AK108098.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-139-A10, full
           insert sequence
          Length = 1042

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 53  tctcttgaatcctgcaatca 72
           ||||||||||||||||||||
Sbjct: 326 tctcttgaatcctgcaatca 307

---

>gb|AC004908.1|AC004908 Homo sapiens PAC clone RP5-855D21, complete sequence
          Length = 138251

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 426    gaaattccaagatgatttct 445
              ||||||||||||||||||||
Sbjct: 137073 gaaattccaagatgatttct 137054

---

>emb|BX465207.14| Zebrafish DNA sequence from clone DKEY-103I16 in linkage group 18,
              complete sequence
          Length = 265632

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 427    aaattccaagatgatttctt 446
              ||||||||||||||||||||
Sbjct: 125478 aaattccaagatgatttctt 125459

---

>emb|AL929190.3| Zebrafish DNA sequence from clone DKEY-77N11, complete sequence
          Length = 150892

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 461    acaccctcctcatgacttac 480
              ||||||||||||||||||||
Sbjct: 111831 acaccctcctcatgacttac 111850


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,828,557
Number of Sequences: 3902068
Number of extensions: 4828557
Number of successful extensions: 118128
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 117870
Number of HSP's gapped (non-prelim): 247
length of query: 594
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 571
effective length of database: 17,143,297,704
effective search space: 9788822988984
effective search space used: 9788822988984
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---