ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags12m17 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK104931.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-G02, full insert sequence Length = 1519 Score = 299 bits (151), Expect = 5e-78 Identities = 322/379 (84%) Strand = Plus / Plus Query: 10 gcgaggcctgcagctcctgccgacatggcgctcgttttgcattcgggcagcggcaacaag 69 |||||||| || ||||| | || ||||||||| || ||||||| || || |||||||| Sbjct: 96 gcgaggccggcggctccagtcggcatggcgcttgtgttgcattgcggaagtggcaacaaa 155 Query: 70 aatgccttcaaggcacttattgctgcagagtactgtggggtcaaggttgagctgcccaag 129 |||||||| |||||||||||||||||||||||| ||| |||||||| |||||| ||||| Sbjct: 156 aatgcctttaaggcacttattgctgcagagtacactggagtcaaggtcgagctgaccaag 215 Query: 130 aactttgagatgggtgtatcaaacaaaacccctgaattcatcaagatgaatccccttggg 189 || |||||||||||||| |||||||| |||||||| || |||||||||| ||||||||| Sbjct: 216 aattttgagatgggtgtctcaaacaagacccctgagtttctcaagatgaacccccttggg 275 Query: 190 aaggtccctgttcttgagactcctgatggtgctgtttttgagagcaatgctattgcacgc 249 ||| | |||||||| ||||||||||| |||||||||||||||||||||||||| || ||| Sbjct: 276 aagattcctgttctggagactcctgaaggtgctgtttttgagagcaatgctatcgcgcgc 335 Query: 250 tatgttgctcgctcaaagggtgacaacctgctttggggtggttctcttattgaatatgca 309 ||||||||||||| |||| ||| | ||||| ||| ||||||||| || ||| | Sbjct: 336 tatgttgctcgcttgaaggacaacagctctctttgtggttcttctcttatcgactattct 395 Query: 310 cgtgttgagcaatggatggacttcgctgccacagaggttgatcccaatatcgcaaggtgg 369 | |||| ||||||||||||||| | || |||||||||||| ||||||| | ||||||| Sbjct: 396 cacattgaacaatggatggacttctcagcaacagaggttgatgccaatattggaaggtgg 455 Query: 370 ttgtacccaaggcttggtt 388 ||||||||||||||||||| Sbjct: 456 ttgtacccaaggcttggtt 474 Score = 93.7 bits (47), Expect = 6e-16 Identities = 71/79 (89%) Strand = Plus / Plus Query: 455 tgaacacacacctggcgtcaaacacattccttgttggacattctgtcactctggctgata 514 ||||||||||||| || |||||||||| ||||||||| ||||| || ||||| ||||||| Sbjct: 541 tgaacacacaccttgcttcaaacacataccttgttgggcattcagttactctagctgata 600 Query: 515 ttgtcatgacatgcaacct 533 |||| |||||||||||||| Sbjct: 601 ttgtgatgacatgcaacct 619
>dbj|AK103928.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-D10, full insert sequence Length = 1529 Score = 299 bits (151), Expect = 5e-78 Identities = 322/379 (84%) Strand = Plus / Plus Query: 10 gcgaggcctgcagctcctgccgacatggcgctcgttttgcattcgggcagcggcaacaag 69 |||||||| || ||||| | || ||||||||| || ||||||| || || |||||||| Sbjct: 86 gcgaggccggcggctccagtcggcatggcgcttgtgttgcattgcggaagtggcaacaaa 145 Query: 70 aatgccttcaaggcacttattgctgcagagtactgtggggtcaaggttgagctgcccaag 129 |||||||| |||||||||||||||||||||||| ||| |||||||| |||||| ||||| Sbjct: 146 aatgcctttaaggcacttattgctgcagagtacactggagtcaaggtcgagctgaccaag 205 Query: 130 aactttgagatgggtgtatcaaacaaaacccctgaattcatcaagatgaatccccttggg 189 || |||||||||||||| |||||||| |||||||| || |||||||||| ||||||||| Sbjct: 206 aattttgagatgggtgtctcaaacaagacccctgagtttctcaagatgaacccccttggg 265 Query: 190 aaggtccctgttcttgagactcctgatggtgctgtttttgagagcaatgctattgcacgc 249 ||| | |||||||| ||||||||||| |||||||||||||||||||||||||| || ||| Sbjct: 266 aagattcctgttctggagactcctgaaggtgctgtttttgagagcaatgctatcgcgcgc 325 Query: 250 tatgttgctcgctcaaagggtgacaacctgctttggggtggttctcttattgaatatgca 309 ||||||||||||| |||| ||| | ||||| ||| ||||||||| || ||| | Sbjct: 326 tatgttgctcgcttgaaggacaacagctctctttgtggttcttctcttatcgactattct 385 Query: 310 cgtgttgagcaatggatggacttcgctgccacagaggttgatcccaatatcgcaaggtgg 369 | |||| ||||||||||||||| | || |||||||||||| ||||||| | ||||||| Sbjct: 386 cacattgaacaatggatggacttctcagcaacagaggttgatgccaatattggaaggtgg 445 Query: 370 ttgtacccaaggcttggtt 388 ||||||||||||||||||| Sbjct: 446 ttgtacccaaggcttggtt 464 Score = 93.7 bits (47), Expect = 6e-16 Identities = 71/79 (89%) Strand = Plus / Plus Query: 455 tgaacacacacctggcgtcaaacacattccttgttggacattctgtcactctggctgata 514 ||||||||||||| || |||||||||| ||||||||| ||||| || ||||| ||||||| Sbjct: 531 tgaacacacaccttgcttcaaacacataccttgttgggcattcagttactctagctgata 590 Query: 515 ttgtcatgacatgcaacct 533 |||| |||||||||||||| Sbjct: 591 ttgtgatgacatgcaacct 609
>dbj|AK101977.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033076P04, full insert sequence Length = 1721 Score = 299 bits (151), Expect = 5e-78 Identities = 322/379 (84%) Strand = Plus / Plus Query: 10 gcgaggcctgcagctcctgccgacatggcgctcgttttgcattcgggcagcggcaacaag 69 |||||||| || ||||| | || ||||||||| || ||||||| || || |||||||| Sbjct: 326 gcgaggccggcggctccagtcggcatggcgcttgtgttgcattgcggaagtggcaacaaa 385 Query: 70 aatgccttcaaggcacttattgctgcagagtactgtggggtcaaggttgagctgcccaag 129 |||||||| |||||||||||||||||||||||| ||| |||||||| |||||| ||||| Sbjct: 386 aatgcctttaaggcacttattgctgcagagtacactggagtcaaggtcgagctgaccaag 445 Query: 130 aactttgagatgggtgtatcaaacaaaacccctgaattcatcaagatgaatccccttggg 189 || |||||||||||||| |||||||| |||||||| || |||||||||| ||||||||| Sbjct: 446 aattttgagatgggtgtctcaaacaagacccctgagtttctcaagatgaacccccttggg 505 Query: 190 aaggtccctgttcttgagactcctgatggtgctgtttttgagagcaatgctattgcacgc 249 ||| | |||||||| ||||||||||| |||||||||||||||||||||||||| || ||| Sbjct: 506 aagattcctgttctggagactcctgaaggtgctgtttttgagagcaatgctatcgcgcgc 565 Query: 250 tatgttgctcgctcaaagggtgacaacctgctttggggtggttctcttattgaatatgca 309 ||||||||||||| |||| ||| | ||||| ||| ||||||||| || ||| | Sbjct: 566 tatgttgctcgcttgaaggacaacagctctctttgtggttcttctcttatcgactattct 625 Query: 310 cgtgttgagcaatggatggacttcgctgccacagaggttgatcccaatatcgcaaggtgg 369 | |||| ||||||||||||||| | || |||||||||||| ||||||| | ||||||| Sbjct: 626 cacattgaacaatggatggacttctcagcaacagaggttgatgccaatattggaaggtgg 685 Query: 370 ttgtacccaaggcttggtt 388 ||||||||||||||||||| Sbjct: 686 ttgtacccaaggcttggtt 704 Score = 93.7 bits (47), Expect = 6e-16 Identities = 71/79 (89%) Strand = Plus / Plus Query: 455 tgaacacacacctggcgtcaaacacattccttgttggacattctgtcactctggctgata 514 ||||||||||||| || |||||||||| ||||||||| ||||| || ||||| ||||||| Sbjct: 771 tgaacacacaccttgcttcaaacacataccttgttgggcattcagttactctagctgata 830 Query: 515 ttgtcatgacatgcaacct 533 |||| |||||||||||||| Sbjct: 831 ttgtgatgacatgcaacct 849
>dbj|AK068226.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013146D22, full insert sequence Length = 1593 Score = 299 bits (151), Expect = 5e-78 Identities = 322/379 (84%) Strand = Plus / Plus Query: 10 gcgaggcctgcagctcctgccgacatggcgctcgttttgcattcgggcagcggcaacaag 69 |||||||| || ||||| | || ||||||||| || ||||||| || || |||||||| Sbjct: 152 gcgaggccggcggctccagtcggcatggcgcttgtgttgcattgcggaagtggcaacaaa 211 Query: 70 aatgccttcaaggcacttattgctgcagagtactgtggggtcaaggttgagctgcccaag 129 |||||||| |||||||||||||||||||||||| ||| |||||||| |||||| ||||| Sbjct: 212 aatgcctttaaggcacttattgctgcagagtacactggagtcaaggtcgagctgaccaag 271 Query: 130 aactttgagatgggtgtatcaaacaaaacccctgaattcatcaagatgaatccccttggg 189 || |||||||||||||| |||||||| |||||||| || |||||||||| ||||||||| Sbjct: 272 aattttgagatgggtgtctcaaacaagacccctgagtttctcaagatgaacccccttggg 331 Query: 190 aaggtccctgttcttgagactcctgatggtgctgtttttgagagcaatgctattgcacgc 249 ||| | |||||||| ||||||||||| |||||||||||||||||||||||||| || ||| Sbjct: 332 aagattcctgttctggagactcctgaaggtgctgtttttgagagcaatgctatcgcgcgc 391 Query: 250 tatgttgctcgctcaaagggtgacaacctgctttggggtggttctcttattgaatatgca 309 ||||||||||||| |||| ||| | ||||| ||| ||||||||| || ||| | Sbjct: 392 tatgttgctcgcttgaaggacaacagctctctttgtggttcttctcttatcgactattct 451 Query: 310 cgtgttgagcaatggatggacttcgctgccacagaggttgatcccaatatcgcaaggtgg 369 | |||| ||||||||||||||| | || |||||||||||| ||||||| | ||||||| Sbjct: 452 cacattgaacaatggatggacttctcagcaacagaggttgatgccaatattggaaggtgg 511 Query: 370 ttgtacccaaggcttggtt 388 ||||||||||||||||||| Sbjct: 512 ttgtacccaaggcttggtt 530 Score = 93.7 bits (47), Expect = 6e-16 Identities = 71/79 (89%) Strand = Plus / Plus Query: 455 tgaacacacacctggcgtcaaacacattccttgttggacattctgtcactctggctgata 514 ||||||||||||| || |||||||||| ||||||||| ||||| || ||||| ||||||| Sbjct: 597 tgaacacacaccttgcttcaaacacataccttgttgggcattcagttactctagctgata 656 Query: 515 ttgtcatgacatgcaacct 533 |||| |||||||||||||| Sbjct: 657 ttgtgatgacatgcaacct 675
>gb|AY224444.1| Oryza sativa (japonica cultivar-group) isolate 22944 elongation factor 1 gamma-like protein mRNA, partial cds Length = 1242 Score = 285 bits (144), Expect = 7e-74 Identities = 282/328 (85%) Strand = Plus / Plus Query: 61 ggcaacaagaatgccttcaaggcacttattgctgcagagtactgtggggtcaaggttgag 120 |||||||| |||||||| |||||||||||||||||||||||| ||| |||||||| ||| Sbjct: 19 ggcaacaaaaatgcctttaaggcacttattgctgcagagtacactggagtcaaggtcgag 78 Query: 121 ctgcccaagaactttgagatgggtgtatcaaacaaaacccctgaattcatcaagatgaat 180 ||| ||||||| |||||||||||||| |||||||| |||||||| || |||||||||| Sbjct: 79 ctgaccaagaattttgagatgggtgtctcaaacaagacccctgagtttctcaagatgaac 138 Query: 181 ccccttgggaaggtccctgttcttgagactcctgatggtgctgtttttgagagcaatgct 240 |||||||||||| | |||||||| ||||||||||| |||||||||||||||||||||||| Sbjct: 139 ccccttgggaagattcctgttctggagactcctgaaggtgctgtttttgagagcaatgct 198 Query: 241 attgcacgctatgttgctcgctcaaagggtgacaacctgctttggggtggttctcttatt 300 || || |||||||||||||||| |||| ||| | ||||| ||| ||||||||| Sbjct: 199 atcgcgcgctatgttgctcgcttgaaggacaacagctctctttgtggttcttctcttatc 258 Query: 301 gaatatgcacgtgttgagcaatggatggacttcgctgccacagaggttgatcccaatatc 360 || ||| | | |||| ||||||||||||||| | || |||||||||||| ||||||| Sbjct: 259 gactattctcacattgaacaatggatggacttctcagcaacagaggttgatgccaatatt 318 Query: 361 gcaaggtggttgtacccaaggcttggtt 388 | |||||||||||||||||||||||||| Sbjct: 319 ggaaggtggttgtacccaaggcttggtt 346 Score = 93.7 bits (47), Expect = 6e-16 Identities = 71/79 (89%) Strand = Plus / Plus Query: 455 tgaacacacacctggcgtcaaacacattccttgttggacattctgtcactctggctgata 514 ||||||||||||| || |||||||||| ||||||||| ||||| || ||||| ||||||| Sbjct: 413 tgaacacacaccttgcttcaaacacataccttgttgggcattcagttactctagctgata 472 Query: 515 ttgtcatgacatgcaacct 533 |||| |||||||||||||| Sbjct: 473 ttgtgatgacatgcaacct 491
>gb|BT016270.1| Zea mays clone Contig103 mRNA sequence Length = 1680 Score = 248 bits (125), Expect = 2e-62 Identities = 272/321 (84%) Strand = Plus / Plus Query: 33 catggcgctcgttttgcattcgggcagcggcaacaagaatgccttcaaggcacttattgc 92 |||||||||||| |||||||| || || ||||| ||||||||||||||||||||||| Sbjct: 167 catggcgctcgtattgcattctggggctggaaacaaaaatgccttcaaggcacttattgc 226 Query: 93 tgcagagtactgtggggtcaaggttgagctgcccaagaactttgagatgggtgtatcaaa 152 |||||| ||| ||||||||||||||||| || ||||| | |||||||||||||| || || Sbjct: 227 tgcagaatacagtggggtcaaggttgagttgaccaaggattttgagatgggtgtctcgaa 286 Query: 153 caaaacccctgaattcatcaagatgaatccccttgggaaggtccctgttcttgagactcc 212 ||| |||||||| || | |||||||| |||||||||||||| |||||||| |||||||| Sbjct: 287 caagacccctgagtttctaaagatgaacccccttgggaaggttcctgttctggagactcc 346 Query: 213 tgatggtgctgtttttgagagcaatgctattgcacgctatgttgctcgctcaaagggtga 272 |||||| ||||||||||||| ||||||||||| |||||||||||||||| |||| ||| Sbjct: 347 tgatggccctgtttttgagagtaatgctattgcgcgctatgttgctcgcttgaaggatga 406 Query: 273 caacctgctttggggtggttctcttattgaatatgcacgtgttgagcaatggatggactt 332 ||||| |||| || ||| | ||||||| | || | |||||||| ||||||||||| Sbjct: 407 caaccctcttttcgggtcttcccgtattgaacaagcccacgttgagcagtggatggactt 466 Query: 333 cgctgccacagaggttgatcc 353 ||||| ||||| |||||||| Sbjct: 467 tgctgcaacagaagttgatcc 487 Score = 69.9 bits (35), Expect = 8e-09 Identities = 53/59 (89%) Strand = Plus / Plus Query: 475 aacacattccttgttggacattctgtcactctggctgatattgtcatgacatgcaacct 533 ||||||| |||||||||||||||||| ||||| ||||| ||||| ||||||||||||| Sbjct: 609 aacacataccttgttggacattctgttactctagctgacattgtattgacatgcaacct 667
>gb|BT016532.1| Zea mays clone Contig365 mRNA sequence Length = 1536 Score = 226 bits (114), Expect = 6e-56 Identities = 246/290 (84%) Strand = Plus / Plus Query: 64 aacaagaatgccttcaaggcacttattgctgcagagtactgtggggtcaaggttgagctg 123 ||||||||||||||||| ||||||||||||||||| ||| ||||| ||||||||||| || Sbjct: 104 aacaagaatgccttcaaagcacttattgctgcagaatacagtgggatcaaggttgagttg 163 Query: 124 cccaagaactttgagatgggtgtatcaaacaaaacccctgaattcatcaagatgaatccc 183 ||||| | |||||||||||||| || ||||| |||||||| || | |||||||| ||| Sbjct: 164 accaaggattttgagatgggtgtctccaacaagacccctgagtttcttaagatgaacccc 223 Query: 184 cttgggaaggtccctgttcttgagactcctgatggtgctgtttttgagagcaatgctatt 243 ||||||||||| |||||||| |||||||||||||| ||||||||||||| |||||||| Sbjct: 224 cttgggaaggttcctgttctggagactcctgatggccctgtttttgagagtaatgctatc 283 Query: 244 gcacgctatgttgctcgctcaaagggtgacaacctgctttggggtggttctcttattgaa 303 ||||||||||||||||||| |||| |||||||| |||| || ||| | ||||||| Sbjct: 284 gcacgctatgttgctcgcttgaaggatgacaaccctctttttgggtcttcccgtattgaa 343 Query: 304 tatgcacgtgttgagcaatggatggacttcgctgccacagaggttgatcc 353 | || | ||||||||||||||||| || || || ||||| |||||||| Sbjct: 344 caagcccacgttgagcaatggatggattttgccgcaacagaagttgatcc 393 Score = 77.8 bits (39), Expect = 3e-11 Identities = 69/79 (87%) Strand = Plus / Plus Query: 455 tgaacacacacctggcgtcaaacacattccttgttggacattctgtcactctggctgata 514 ||||||||||||| || |||||||||| ||||||||| ||| |||| ||||| ||||| | Sbjct: 495 tgaacacacaccttgcctcaaacacataccttgttgggcatgctgttactctagctgaca 554 Query: 515 ttgtcatgacatgcaacct 533 |||| ||||||||||||| Sbjct: 555 ttgtattgacatgcaacct 573
>gb|BT016452.1| Zea mays clone Contig285 mRNA sequence Length = 1562 Score = 226 bits (114), Expect = 6e-56 Identities = 246/290 (84%) Strand = Plus / Plus Query: 64 aacaagaatgccttcaaggcacttattgctgcagagtactgtggggtcaaggttgagctg 123 ||||||||||||||||| ||||||||||||||||| ||| ||||| ||||||||||| || Sbjct: 111 aacaagaatgccttcaaagcacttattgctgcagaatacagtgggatcaaggttgagttg 170 Query: 124 cccaagaactttgagatgggtgtatcaaacaaaacccctgaattcatcaagatgaatccc 183 ||||| | |||||||||||||| || ||||| |||||||| || | |||||||| ||| Sbjct: 171 accaaggattttgagatgggtgtctccaacaagacccctgagtttcttaagatgaacccc 230 Query: 184 cttgggaaggtccctgttcttgagactcctgatggtgctgtttttgagagcaatgctatt 243 ||||||||||| |||||||| |||||||||||||| ||||||||||||| |||||||| Sbjct: 231 cttgggaaggttcctgttctggagactcctgatggccctgtttttgagagtaatgctatc 290 Query: 244 gcacgctatgttgctcgctcaaagggtgacaacctgctttggggtggttctcttattgaa 303 ||||||||||||||||||| |||| |||||||| |||| || ||| | ||||||| Sbjct: 291 gcacgctatgttgctcgcttgaaggatgacaaccctctttttgggtcttcccgtattgaa 350 Query: 304 tatgcacgtgttgagcaatggatggacttcgctgccacagaggttgatcc 353 | || | ||||||||||||||||| || || || ||||| |||||||| Sbjct: 351 caagcccacgttgagcaatggatggattttgccgcaacagaagttgatcc 400 Score = 77.8 bits (39), Expect = 3e-11 Identities = 69/79 (87%) Strand = Plus / Plus Query: 455 tgaacacacacctggcgtcaaacacattccttgttggacattctgtcactctggctgata 514 ||||||||||||| || |||||||||| ||||||||| ||| |||| ||||| ||||| | Sbjct: 502 tgaacacacaccttgcctcaaacacataccttgttgggcatgctgttactctagctgaca 561 Query: 515 ttgtcatgacatgcaacct 533 |||| ||||||||||||| Sbjct: 562 ttgtattgacatgcaacct 580
>ref|XM_464689.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1708 Score = 214 bits (108), Expect = 2e-52 Identities = 210/244 (86%) Strand = Plus / Plus Query: 34 atggcgctcgttttgcattcgggcagcggcaacaagaatgccttcaaggcacttattgct 93 ||||||||||| |||||| | ||||| || ||||||||||| ||||||||||| |||||| Sbjct: 115 atggcgctcgtattgcatgctggcagtggaaacaagaatgcattcaaggcactcattgct 174 Query: 94 gcagagtactgtggggtcaaggttgagctgcccaagaactttgagatgggtgtatcaaac 153 || ||||||| ||| |||||||||||| || ||||||||| |||||||||| || ||| Sbjct: 175 gccgagtactctggtgtcaaggttgagttggtgaagaactttcagatgggtgtctccaac 234 Query: 154 aaaacccctgaattcatcaagatgaatccccttgggaaggtccctgttcttgagactcct 213 || || ||||| || ||||||||||||| |||||||| | |||||||| ||||||||| Sbjct: 235 aagacacctgagtttctcaagatgaatcctattgggaagattcctgttctagagactcct 294 Query: 214 gatggtgctgtttttgagagcaatgctattgcacgctatgttgctcgctcaaagggtgac 273 |||||| ||||||||||||||||||| |||||||| |||||| | ||||| |||| |||| Sbjct: 295 gatggtcctgtttttgagagcaatgcgattgcacgatatgttacccgctcgaaggctgac 354 Query: 274 aacc 277 |||| Sbjct: 355 aacc 358 Score = 73.8 bits (37), Expect = 5e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 457 aacacacacctggcgtcaaacacattccttgttggacattctgtcactctggctgatatt 516 ||||||||||| || |||||||||| ||||||||| ||||| || ||||| ||||||||| Sbjct: 538 aacacacaccttgcatcaaacacataccttgttggccattcggtgactcttgctgatatt 597 Query: 517 gtcatgacatgcaacct 533 || ||||| || ||||| Sbjct: 598 gtgatgacctgtaacct 614
>dbj|AK103901.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033150K18, full insert sequence Length = 1708 Score = 214 bits (108), Expect = 2e-52 Identities = 210/244 (86%) Strand = Plus / Plus Query: 34 atggcgctcgttttgcattcgggcagcggcaacaagaatgccttcaaggcacttattgct 93 ||||||||||| |||||| | ||||| || ||||||||||| ||||||||||| |||||| Sbjct: 115 atggcgctcgtattgcatgctggcagtggaaacaagaatgcattcaaggcactcattgct 174 Query: 94 gcagagtactgtggggtcaaggttgagctgcccaagaactttgagatgggtgtatcaaac 153 || ||||||| ||| |||||||||||| || ||||||||| |||||||||| || ||| Sbjct: 175 gccgagtactctggtgtcaaggttgagttggtgaagaactttcagatgggtgtctccaac 234 Query: 154 aaaacccctgaattcatcaagatgaatccccttgggaaggtccctgttcttgagactcct 213 || || ||||| || ||||||||||||| |||||||| | |||||||| ||||||||| Sbjct: 235 aagacacctgagtttctcaagatgaatcctattgggaagattcctgttctagagactcct 294 Query: 214 gatggtgctgtttttgagagcaatgctattgcacgctatgttgctcgctcaaagggtgac 273 |||||| ||||||||||||||||||| |||||||| |||||| | ||||| |||| |||| Sbjct: 295 gatggtcctgtttttgagagcaatgcgattgcacgatatgttacccgctcgaaggctgac 354 Query: 274 aacc 277 |||| Sbjct: 355 aacc 358 Score = 73.8 bits (37), Expect = 5e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 457 aacacacacctggcgtcaaacacattccttgttggacattctgtcactctggctgatatt 516 ||||||||||| || |||||||||| ||||||||| ||||| || ||||| ||||||||| Sbjct: 538 aacacacaccttgcatcaaacacataccttgttggccattcggtgactcttgctgatatt 597 Query: 517 gtcatgacatgcaacct 533 || ||||| || ||||| Sbjct: 598 gtgatgacctgtaacct 614
>ref|XM_464690.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1718 Score = 194 bits (98), Expect = 2e-46 Identities = 185/214 (86%) Strand = Plus / Plus Query: 64 aacaagaatgccttcaaggcacttattgctgcagagtactgtggggtcaaggttgagctg 123 ||||||||||| ||||||||||| |||||||| ||||||| ||| |||||||||||| || Sbjct: 157 aacaagaatgcattcaaggcactcattgctgccgagtactctggtgtcaaggttgagttg 216 Query: 124 cccaagaactttgagatgggtgtatcaaacaaaacccctgaattcatcaagatgaatccc 183 | ||||||||| |||||||||| || ||||| || ||||| | ||||||||||||| Sbjct: 217 gcaaagaactttcagatgggtgtctccaacaagactcctgagtatctcaagatgaatcct 276 Query: 184 cttgggaaggtccctgttcttgagactcctgatggtgctgtttttgagagcaatgctatt 243 |||||||||||||| |||| ||||||||||||||| |||||||||| |||||||| ||| Sbjct: 277 attgggaaggtccctattctagagactcctgatggtcctgtttttgaaagcaatgcgatt 336 Query: 244 gcacgctatgttgctcgctcaaagggtgacaacc 277 ||||| |||||| ||||||| ||| |||||||| Sbjct: 337 gcacgatatgttactcgctcgaagtctgacaacc 370 Score = 89.7 bits (45), Expect = 9e-15 Identities = 69/77 (89%) Strand = Plus / Plus Query: 457 aacacacacctggcgtcaaacacattccttgttggacattctgtcactctggctgatatt 516 ||||||||||| || |||||||||| ||||||||| ||||| || ||||| ||||||||| Sbjct: 550 aacacacaccttgcatcaaacacataccttgttggccattcagtgactcttgctgatatt 609 Query: 517 gtcatgacatgcaacct 533 || |||||||||||||| Sbjct: 610 gtgatgacatgcaacct 626
>dbj|AK061944.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-E02, full insert sequence Length = 1723 Score = 194 bits (98), Expect = 2e-46 Identities = 185/214 (86%) Strand = Plus / Plus Query: 64 aacaagaatgccttcaaggcacttattgctgcagagtactgtggggtcaaggttgagctg 123 ||||||||||| ||||||||||| |||||||| ||||||| ||| |||||||||||| || Sbjct: 162 aacaagaatgcattcaaggcactcattgctgccgagtactctggtgtcaaggttgagttg 221 Query: 124 cccaagaactttgagatgggtgtatcaaacaaaacccctgaattcatcaagatgaatccc 183 | ||||||||| |||||||||| || ||||| || ||||| | ||||||||||||| Sbjct: 222 gcaaagaactttcagatgggtgtctccaacaagactcctgagtatctcaagatgaatcct 281 Query: 184 cttgggaaggtccctgttcttgagactcctgatggtgctgtttttgagagcaatgctatt 243 |||||||||||||| |||| ||||||||||||||| |||||||||| |||||||| ||| Sbjct: 282 attgggaaggtccctattctagagactcctgatggtcctgtttttgaaagcaatgcgatt 341 Query: 244 gcacgctatgttgctcgctcaaagggtgacaacc 277 ||||| |||||| ||||||| ||| |||||||| Sbjct: 342 gcacgatatgttactcgctcgaagtctgacaacc 375 Score = 89.7 bits (45), Expect = 9e-15 Identities = 69/77 (89%) Strand = Plus / Plus Query: 457 aacacacacctggcgtcaaacacattccttgttggacattctgtcactctggctgatatt 516 ||||||||||| || |||||||||| ||||||||| ||||| || ||||| ||||||||| Sbjct: 555 aacacacaccttgcatcaaacacataccttgttggccattcagtgactcttgctgatatt 614 Query: 517 gtcatgacatgcaacct 533 || |||||||||||||| Sbjct: 615 gtgatgacatgcaacct 631
>gb|AY224455.1| Oryza sativa (japonica cultivar-group) isolate 23443 elongation factor 1 gamma-like protein mRNA, partial cds Length = 1230 Score = 194 bits (98), Expect = 2e-46 Identities = 185/214 (86%) Strand = Plus / Plus Query: 64 aacaagaatgccttcaaggcacttattgctgcagagtactgtggggtcaaggttgagctg 123 ||||||||||| ||||||||||| |||||||| ||||||| ||| |||||||||||| || Sbjct: 4 aacaagaatgcattcaaggcactcattgctgccgagtactctggtgtcaaggttgagttg 63 Query: 124 cccaagaactttgagatgggtgtatcaaacaaaacccctgaattcatcaagatgaatccc 183 ||||||||| |||||||||| || ||||| || ||||| || ||||||||||||| Sbjct: 64 gtgaagaactttcagatgggtgtctccaacaagacacctgagtttctcaagatgaatcct 123 Query: 184 cttgggaaggtccctgttcttgagactcctgatggtgctgtttttgagagcaatgctatt 243 |||||||| | |||||||| ||||||||||||||| ||||||||||||||||||| ||| Sbjct: 124 attgggaagattcctgttctagagactcctgatggtcctgtttttgagagcaatgcgatt 183 Query: 244 gcacgctatgttgctcgctcaaagggtgacaacc 277 ||||| |||||| | ||||| |||| |||||||| Sbjct: 184 gcacgatatgttacccgctcgaaggctgacaacc 217 Score = 73.8 bits (37), Expect = 5e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 457 aacacacacctggcgtcaaacacattccttgttggacattctgtcactctggctgatatt 516 ||||||||||| || |||||||||| ||||||||| ||||| || ||||| ||||||||| Sbjct: 397 aacacacaccttgcatcaaacacataccttgttggccattcggtgactcttgctgatatt 456 Query: 517 gtcatgacatgcaacct 533 || ||||| || ||||| Sbjct: 457 gtgatgacctgtaacct 473
>dbj|AK104946.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-108-F01, full insert sequence Length = 817 Score = 194 bits (98), Expect = 2e-46 Identities = 185/214 (86%) Strand = Plus / Plus Query: 64 aacaagaatgccttcaaggcacttattgctgcagagtactgtggggtcaaggttgagctg 123 ||||||||||| ||||||||||| |||||||| ||||||| ||| |||||||||||| || Sbjct: 159 aacaagaatgcattcaaggcactcattgctgccgagtactctggtgtcaaggttgagttg 218 Query: 124 cccaagaactttgagatgggtgtatcaaacaaaacccctgaattcatcaagatgaatccc 183 | ||||||||| |||||||||| || ||||| || ||||| | ||||||||||||| Sbjct: 219 gcaaagaactttcagatgggtgtctccaacaagactcctgagtatctcaagatgaatcct 278 Query: 184 cttgggaaggtccctgttcttgagactcctgatggtgctgtttttgagagcaatgctatt 243 |||||||||||||| |||| ||||||||||||||| |||||||||| |||||||| ||| Sbjct: 279 attgggaaggtccctattctagagactcctgatggtcctgtttttgaaagcaatgcgatt 338 Query: 244 gcacgctatgttgctcgctcaaagggtgacaacc 277 ||||| |||||| ||||||| ||| |||||||| Sbjct: 339 gcacgatatgttactcgctcgaagtctgacaacc 372 Score = 89.7 bits (45), Expect = 9e-15 Identities = 69/77 (89%) Strand = Plus / Plus Query: 457 aacacacacctggcgtcaaacacattccttgttggacattctgtcactctggctgatatt 516 ||||||||||| || |||||||||| ||||||||| ||||| || ||||| ||||||||| Sbjct: 552 aacacacaccttgcatcaaacacataccttgttggccattcagtgactcttgctgatatt 611 Query: 517 gtcatgacatgcaacct 533 || |||||||||||||| Sbjct: 612 gtgatgacatgcaacct 628
>dbj|D89802.1| Oryza sativa mRNA for elongation factor 1B gamma, complete cds Length = 1591 Score = 194 bits (98), Expect = 2e-46 Identities = 185/214 (86%) Strand = Plus / Plus Query: 64 aacaagaatgccttcaaggcacttattgctgcagagtactgtggggtcaaggttgagctg 123 ||||||||||| ||||||||||| |||||||| ||||||| ||| |||||||||||| || Sbjct: 122 aacaagaatgcattcaaggcactcattgctgccgagtactctggtgtcaaggttgagttg 181 Query: 124 cccaagaactttgagatgggtgtatcaaacaaaacccctgaattcatcaagatgaatccc 183 | ||||||||| |||||||||| || ||||| || ||||| | ||||||||||||| Sbjct: 182 gcaaagaactttcagatgggtgtctccaacaagactcctgagtatctcaagatgaatcct 241 Query: 184 cttgggaaggtccctgttcttgagactcctgatggtgctgtttttgagagcaatgctatt 243 |||||||||||||| |||| ||||||||||||||| |||||||||| |||||||| ||| Sbjct: 242 attgggaaggtccctattctagagactcctgatggtcctgtttttgaaagcaatgcgatt 301 Query: 244 gcacgctatgttgctcgctcaaagggtgacaacc 277 ||||| |||||| ||||||| ||| |||||||| Sbjct: 302 gcacgatatgttactcgctcgaagtctgacaacc 335 Score = 89.7 bits (45), Expect = 9e-15 Identities = 69/77 (89%) Strand = Plus / Plus Query: 457 aacacacacctggcgtcaaacacattccttgttggacattctgtcactctggctgatatt 516 ||||||||||| || |||||||||| ||||||||| ||||| || ||||| ||||||||| Sbjct: 515 aacacacaccttgcatcaaacacataccttgttggccattcagtgactcttgctgatatt 574 Query: 517 gtcatgacatgcaacct 533 || |||||||||||||| Sbjct: 575 gtgatgacatgcaacct 591
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 155 bits (78), Expect = 2e-34 Identities = 120/134 (89%) Strand = Plus / Minus Query: 61 ggcaacaagaatgccttcaaggcacttattgctgcagagtactgtggggtcaaggttgag 120 |||||||| |||||||| |||||||||||||||||||||||| ||| |||||||| ||| Sbjct: 21790622 ggcaacaaaaatgcctttaaggcacttattgctgcagagtacactggagtcaaggtcgag 21790563 Query: 121 ctgcccaagaactttgagatgggtgtatcaaacaaaacccctgaattcatcaagatgaat 180 ||| ||||||| |||||||||||||| |||||||| |||||||| || |||||||||| Sbjct: 21790562 ctgaccaagaattttgagatgggtgtctcaaacaagacccctgagtttctcaagatgaac 21790503 Query: 181 ccccttgggaaggt 194 |||||||||||||| Sbjct: 21790502 ccccttgggaaggt 21790489 Score = 93.7 bits (47), Expect = 6e-16 Identities = 68/75 (90%) Strand = Plus / Minus Query: 314 ttgagcaatggatggacttcgctgccacagaggttgatcccaatatcgcaaggtggttgt 373 |||| ||||||||||||||| | || |||||||||||| ||||||| | ||||||||||| Sbjct: 21790127 ttgaacaatggatggacttctcagcaacagaggttgatgccaatattggaaggtggttgt 21790068 Query: 374 acccaaggcttggtt 388 ||||||||||||||| Sbjct: 21790067 acccaaggcttggtt 21790053 Score = 93.7 bits (47), Expect = 6e-16 Identities = 71/79 (89%) Strand = Plus / Minus Query: 455 tgaacacacacctggcgtcaaacacattccttgttggacattctgtcactctggctgata 514 ||||||||||||| || |||||||||| ||||||||| ||||| || ||||| ||||||| Sbjct: 21789907 tgaacacacaccttgcttcaaacacataccttgttgggcattcagttactctagctgata 21789848 Query: 515 ttgtcatgacatgcaacct 533 |||| |||||||||||||| Sbjct: 21789847 ttgtgatgacatgcaacct 21789829 Score = 83.8 bits (42), Expect = 5e-13 Identities = 54/58 (93%) Strand = Plus / Minus Query: 196 cctgttcttgagactcctgatggtgctgtttttgagagcaatgctattgcacgctatg 253 |||||||| ||||||||||| |||||||||||||||||||||||||| || ||||||| Sbjct: 21790411 cctgttctggagactcctgaaggtgctgtttttgagagcaatgctatcgcgcgctatg 21790354
>dbj|AP005460.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0610D01 Length = 146418 Score = 155 bits (78), Expect = 2e-34 Identities = 120/134 (89%) Strand = Plus / Minus Query: 61 ggcaacaagaatgccttcaaggcacttattgctgcagagtactgtggggtcaaggttgag 120 |||||||| |||||||| |||||||||||||||||||||||| ||| |||||||| ||| Sbjct: 48703 ggcaacaaaaatgcctttaaggcacttattgctgcagagtacactggagtcaaggtcgag 48644 Query: 121 ctgcccaagaactttgagatgggtgtatcaaacaaaacccctgaattcatcaagatgaat 180 ||| ||||||| |||||||||||||| |||||||| |||||||| || |||||||||| Sbjct: 48643 ctgaccaagaattttgagatgggtgtctcaaacaagacccctgagtttctcaagatgaac 48584 Query: 181 ccccttgggaaggt 194 |||||||||||||| Sbjct: 48583 ccccttgggaaggt 48570 Score = 93.7 bits (47), Expect = 6e-16 Identities = 68/75 (90%) Strand = Plus / Minus Query: 314 ttgagcaatggatggacttcgctgccacagaggttgatcccaatatcgcaaggtggttgt 373 |||| ||||||||||||||| | || |||||||||||| ||||||| | ||||||||||| Sbjct: 48208 ttgaacaatggatggacttctcagcaacagaggttgatgccaatattggaaggtggttgt 48149 Query: 374 acccaaggcttggtt 388 ||||||||||||||| Sbjct: 48148 acccaaggcttggtt 48134 Score = 93.7 bits (47), Expect = 6e-16 Identities = 71/79 (89%) Strand = Plus / Minus Query: 455 tgaacacacacctggcgtcaaacacattccttgttggacattctgtcactctggctgata 514 ||||||||||||| || |||||||||| ||||||||| ||||| || ||||| ||||||| Sbjct: 47988 tgaacacacaccttgcttcaaacacataccttgttgggcattcagttactctagctgata 47929 Query: 515 ttgtcatgacatgcaacct 533 |||| |||||||||||||| Sbjct: 47928 ttgtgatgacatgcaacct 47910 Score = 83.8 bits (42), Expect = 5e-13 Identities = 54/58 (93%) Strand = Plus / Minus Query: 196 cctgttcttgagactcctgatggtgctgtttttgagagcaatgctattgcacgctatg 253 |||||||| ||||||||||| |||||||||||||||||||||||||| || ||||||| Sbjct: 48492 cctgttctggagactcctgaaggtgctgtttttgagagcaatgctatcgcgcgctatg 48435
>dbj|AP004729.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0006A22 Length = 190690 Score = 155 bits (78), Expect = 2e-34 Identities = 120/134 (89%) Strand = Plus / Minus Query: 61 ggcaacaagaatgccttcaaggcacttattgctgcagagtactgtggggtcaaggttgag 120 |||||||| |||||||| |||||||||||||||||||||||| ||| |||||||| ||| Sbjct: 13107 ggcaacaaaaatgcctttaaggcacttattgctgcagagtacactggagtcaaggtcgag 13048 Query: 121 ctgcccaagaactttgagatgggtgtatcaaacaaaacccctgaattcatcaagatgaat 180 ||| ||||||| |||||||||||||| |||||||| |||||||| || |||||||||| Sbjct: 13047 ctgaccaagaattttgagatgggtgtctcaaacaagacccctgagtttctcaagatgaac 12988 Query: 181 ccccttgggaaggt 194 |||||||||||||| Sbjct: 12987 ccccttgggaaggt 12974 Score = 93.7 bits (47), Expect = 6e-16 Identities = 68/75 (90%) Strand = Plus / Minus Query: 314 ttgagcaatggatggacttcgctgccacagaggttgatcccaatatcgcaaggtggttgt 373 |||| ||||||||||||||| | || |||||||||||| ||||||| | ||||||||||| Sbjct: 12612 ttgaacaatggatggacttctcagcaacagaggttgatgccaatattggaaggtggttgt 12553 Query: 374 acccaaggcttggtt 388 ||||||||||||||| Sbjct: 12552 acccaaggcttggtt 12538 Score = 93.7 bits (47), Expect = 6e-16 Identities = 71/79 (89%) Strand = Plus / Minus Query: 455 tgaacacacacctggcgtcaaacacattccttgttggacattctgtcactctggctgata 514 ||||||||||||| || |||||||||| ||||||||| ||||| || ||||| ||||||| Sbjct: 12392 tgaacacacaccttgcttcaaacacataccttgttgggcattcagttactctagctgata 12333 Query: 515 ttgtcatgacatgcaacct 533 |||| |||||||||||||| Sbjct: 12332 ttgtgatgacatgcaacct 12314 Score = 83.8 bits (42), Expect = 5e-13 Identities = 54/58 (93%) Strand = Plus / Minus Query: 196 cctgttcttgagactcctgatggtgctgtttttgagagcaatgctattgcacgctatg 253 |||||||| ||||||||||| |||||||||||||||||||||||||| || ||||||| Sbjct: 12896 cctgttctggagactcctgaaggtgctgtttttgagagcaatgctatcgcgcgctatg 12839
>gb|BT016763.1| Zea mays clone Contig596 mRNA sequence Length = 1658 Score = 141 bits (71), Expect = 3e-30 Identities = 254/315 (80%) Strand = Plus / Plus Query: 64 aacaagaatgccttcaaggcacttattgctgcagagtactgtggggtcaaggttgagctg 123 ||||| ||||| ||||| |||| ||||| ||||| ||| | || |||||||||||| || Sbjct: 121 aacaaaaatgcattcaaaacactaattgccgcagaatacagcggtgtcaaggttgagttg 180 Query: 124 cccaagaactttgagatgggtgtatcaaacaaaacccctgaattcatcaagatgaatccc 183 ||| ||||| | |||||||| || |||||||| || || ||| |||||||||| || Sbjct: 181 gtgaaggactttcaaatgggtgtctccaacaaaactccagagttcctcaagatgaaccct 240 Query: 184 cttgggaaggtccctgttcttgagactcctgatggtgctgtttttgagagcaatgctatt 243 |||||||| | ||||| || ||||||||||||||| ||||||||||||||||||| ||| Sbjct: 241 attgggaagattcctgtcctggagactcctgatggtcctgtttttgagagcaatgcaatt 300 Query: 244 gcacgctatgttgctcgctcaaagggtgacaacctgctttggggtggttctcttattgaa 303 ||| | |||||| |||||| |||| ||| |||| |||| || ||| || ||||| Sbjct: 301 gcaagatatgttactcgcttgaaggctgataacccactttatggatcttcactgattgat 360 Query: 304 tatgcacgtgttgagcaatggatggacttcgctgccacagaggttgatcccaatatcgca 363 ||||| | | ||||||||||||| ||||| ||||| |||||||||||| | || || | | Sbjct: 361 tatgcccatattgagcaatggattgactttgctgcaacagaggttgatgcaaacattgga 420 Query: 364 aggtggttgtaccca 378 | ||||||||||||| Sbjct: 421 aagtggttgtaccca 435 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 472 tcaaacacattccttgttggacattctgtcactctggctgatattgtcatgacatgcaa 530 |||||||||||||||||||| ||||| || ||||| || ||||| || ||||||||||| Sbjct: 529 tcaaacacattccttgttgggcattcagtgactctcgcggatatcgtgatgacatgcaa 587
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 113 bits (57), Expect = 6e-22 Identities = 126/149 (84%) Strand = Plus / Plus Query: 46 ttgcattcgggcagcggcaacaagaatgccttcaaggcacttattgctgcagagtactgt 105 |||||| | ||||| || ||||||||||| ||||||||||| |||||||| ||||||| | Sbjct: 6717305 ttgcatgctggcagtggaaacaagaatgcattcaaggcactcattgctgccgagtactct 6717364 Query: 106 ggggtcaaggttgagctgcccaagaactttgagatgggtgtatcaaacaaaacccctgaa 165 || |||||||||||| || ||||||||| |||||||||| || ||||| || ||||| Sbjct: 6717365 ggtgtcaaggttgagttggtgaagaactttcagatgggtgtctccaacaagacacctgag 6717424 Query: 166 ttcatcaagatgaatccccttgggaaggt 194 || ||||||||||||| |||||||||| Sbjct: 6717425 tttctcaagatgaatcctattgggaaggt 6717453 Score = 109 bits (55), Expect = 9e-21 Identities = 112/131 (85%) Strand = Plus / Plus Query: 64 aacaagaatgccttcaaggcacttattgctgcagagtactgtggggtcaaggttgagctg 123 ||||||||||| ||||||||||| |||||||| ||||||| ||| |||||||||||| || Sbjct: 6722383 aacaagaatgcattcaaggcactcattgctgccgagtactctggtgtcaaggttgagttg 6722442 Query: 124 cccaagaactttgagatgggtgtatcaaacaaaacccctgaattcatcaagatgaatccc 183 | ||||||||| |||||||||| || ||||| || ||||| | ||||||||||||| Sbjct: 6722443 gcaaagaactttcagatgggtgtctccaacaagactcctgagtatctcaagatgaatcct 6722502 Query: 184 cttgggaaggt 194 |||||||||| Sbjct: 6722503 attgggaaggt 6722513 Score = 89.7 bits (45), Expect = 9e-15 Identities = 69/77 (89%) Strand = Plus / Plus Query: 457 aacacacacctggcgtcaaacacattccttgttggacattctgtcactctggctgatatt 516 ||||||||||| || |||||||||| ||||||||| ||||| || ||||| ||||||||| Sbjct: 6723159 aacacacaccttgcatcaaacacataccttgttggccattcagtgactcttgctgatatt 6723218 Query: 517 gtcatgacatgcaacct 533 || |||||||||||||| Sbjct: 6723219 gtgatgacatgcaacct 6723235 Score = 83.8 bits (42), Expect = 5e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 196 cctgttcttgagactcctgatggtgctgtttttgagagcaatgctattgcacgctatg 253 |||||||| ||||||||||||||| ||||||||||||||||||| |||||||| |||| Sbjct: 6717526 cctgttctagagactcctgatggtcctgtttttgagagcaatgcgattgcacgatatg 6717583 Score = 77.8 bits (39), Expect = 3e-11 Identities = 57/63 (90%) Strand = Plus / Plus Query: 191 aggtccctgttcttgagactcctgatggtgctgtttttgagagcaatgctattgcacgct 250 |||||||| |||| ||||||||||||||| |||||||||| |||||||| |||||||| | Sbjct: 6722580 aggtccctattctagagactcctgatggtcctgtttttgaaagcaatgcgattgcacgat 6722639 Query: 251 atg 253 ||| Sbjct: 6722640 atg 6722642 Score = 73.8 bits (37), Expect = 5e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 457 aacacacacctggcgtcaaacacattccttgttggacattctgtcactctggctgatatt 516 ||||||||||| || |||||||||| ||||||||| ||||| || ||||| ||||||||| Sbjct: 6718030 aacacacaccttgcatcaaacacataccttgttggccattcggtgactcttgctgatatt 6718089 Query: 517 gtcatgacatgcaacct 533 || ||||| || ||||| Sbjct: 6718090 gtgatgacctgtaacct 6718106
>dbj|AP005797.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1131G07 Length = 133992 Score = 113 bits (57), Expect = 6e-22 Identities = 126/149 (84%) Strand = Plus / Plus Query: 46 ttgcattcgggcagcggcaacaagaatgccttcaaggcacttattgctgcagagtactgt 105 |||||| | ||||| || ||||||||||| ||||||||||| |||||||| ||||||| | Sbjct: 38358 ttgcatgctggcagtggaaacaagaatgcattcaaggcactcattgctgccgagtactct 38417 Query: 106 ggggtcaaggttgagctgcccaagaactttgagatgggtgtatcaaacaaaacccctgaa 165 || |||||||||||| || ||||||||| |||||||||| || ||||| || ||||| Sbjct: 38418 ggtgtcaaggttgagttggtgaagaactttcagatgggtgtctccaacaagacacctgag 38477 Query: 166 ttcatcaagatgaatccccttgggaaggt 194 || ||||||||||||| |||||||||| Sbjct: 38478 tttctcaagatgaatcctattgggaaggt 38506 Score = 109 bits (55), Expect = 9e-21 Identities = 112/131 (85%) Strand = Plus / Plus Query: 64 aacaagaatgccttcaaggcacttattgctgcagagtactgtggggtcaaggttgagctg 123 ||||||||||| ||||||||||| |||||||| ||||||| ||| |||||||||||| || Sbjct: 43436 aacaagaatgcattcaaggcactcattgctgccgagtactctggtgtcaaggttgagttg 43495 Query: 124 cccaagaactttgagatgggtgtatcaaacaaaacccctgaattcatcaagatgaatccc 183 | ||||||||| |||||||||| || ||||| || ||||| | ||||||||||||| Sbjct: 43496 gcaaagaactttcagatgggtgtctccaacaagactcctgagtatctcaagatgaatcct 43555 Query: 184 cttgggaaggt 194 |||||||||| Sbjct: 43556 attgggaaggt 43566 Score = 89.7 bits (45), Expect = 9e-15 Identities = 69/77 (89%) Strand = Plus / Plus Query: 457 aacacacacctggcgtcaaacacattccttgttggacattctgtcactctggctgatatt 516 ||||||||||| || |||||||||| ||||||||| ||||| || ||||| ||||||||| Sbjct: 44212 aacacacaccttgcatcaaacacataccttgttggccattcagtgactcttgctgatatt 44271 Query: 517 gtcatgacatgcaacct 533 || |||||||||||||| Sbjct: 44272 gtgatgacatgcaacct 44288 Score = 83.8 bits (42), Expect = 5e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 196 cctgttcttgagactcctgatggtgctgtttttgagagcaatgctattgcacgctatg 253 |||||||| ||||||||||||||| ||||||||||||||||||| |||||||| |||| Sbjct: 38579 cctgttctagagactcctgatggtcctgtttttgagagcaatgcgattgcacgatatg 38636 Score = 77.8 bits (39), Expect = 3e-11 Identities = 57/63 (90%) Strand = Plus / Plus Query: 191 aggtccctgttcttgagactcctgatggtgctgtttttgagagcaatgctattgcacgct 250 |||||||| |||| ||||||||||||||| |||||||||| |||||||| |||||||| | Sbjct: 43633 aggtccctattctagagactcctgatggtcctgtttttgaaagcaatgcgattgcacgat 43692 Query: 251 atg 253 ||| Sbjct: 43693 atg 43695 Score = 73.8 bits (37), Expect = 5e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 457 aacacacacctggcgtcaaacacattccttgttggacattctgtcactctggctgatatt 516 ||||||||||| || |||||||||| ||||||||| ||||| || ||||| ||||||||| Sbjct: 39083 aacacacaccttgcatcaaacacataccttgttggccattcggtgactcttgctgatatt 39142 Query: 517 gtcatgacatgcaacct 533 || ||||| || ||||| Sbjct: 39143 gtgatgacctgtaacct 39159
>gb|DQ222511.1| Solanum tuberosum clone 117C01 unknown mRNA Length = 1472 Score = 93.7 bits (47), Expect = 6e-16 Identities = 98/115 (85%) Strand = Plus / Plus Query: 137 agatgggtgtatcaaacaaaacccctgaattcatcaagatgaatccccttgggaaggtcc 196 ||||||||||||||||||| || ||||| || | |||||||| || |||| ||||| | Sbjct: 145 agatgggtgtatcaaacaacacacctgagtttcttaagatgaacccaattggaaaggttc 204 Query: 197 ctgttcttgagactcctgatggtgctgtttttgagagcaatgctattgcacgcta 251 |||| ||||| || |||||||| |||||||||||||||||||||| |||||||| Sbjct: 205 ctgtgcttgaaacacctgatggacctgtttttgagagcaatgctatcgcacgcta 259
>gb|BT013535.1| Lycopersicon esculentum clone 132253F, mRNA sequence Length = 1995 Score = 93.7 bits (47), Expect = 6e-16 Identities = 101/119 (84%) Strand = Plus / Plus Query: 137 agatgggtgtatcaaacaaaacccctgaattcatcaagatgaatccccttgggaaggtcc 196 |||||||||| |||||||| || ||||| || | |||||||| || |||| ||||| | Sbjct: 669 agatgggtgtgtcaaacaacacacctgagtttcttaagatgaacccgattggaaaggttc 728 Query: 197 ctgttcttgagactcctgatggtgctgtttttgagagcaatgctattgcacgctatgtt 255 |||| ||||| || |||||||| |||||||||||||||||||||| |||||||||||| Sbjct: 729 ctgtgcttgaaacacctgatggacctgtttttgagagcaatgctatcgcacgctatgtt 787
>gb|DQ241837.1| Solanum tuberosum clone 180F09 putative elongation factor 1-gamma-like mRNA, complete cds Length = 1639 Score = 93.7 bits (47), Expect = 6e-16 Identities = 101/119 (84%) Strand = Plus / Plus Query: 137 agatgggtgtatcaaacaaaacccctgaattcatcaagatgaatccccttgggaaggtcc 196 ||||||||||||||||||| || ||||| || | ||||||||||| |||| ||||| | Sbjct: 192 agatgggtgtatcaaacaagactcctgagtttcttgagatgaatcccattggaaaggttc 251 Query: 197 ctgttcttgagactcctgatggtgctgtttttgagagcaatgctattgcacgctatgtt 255 |||| ||| | || ||| |||| ||||||||||||||||||||||||| ||||||||| Sbjct: 252 ctgtgcttcaaacaccttatggacctgtttttgagagcaatgctattgcccgctatgtt 310
>gb|AY109340.1| Zea mays CL5298_2 mRNA sequence Length = 1863 Score = 85.7 bits (43), Expect = 1e-13 Identities = 70/79 (88%) Strand = Plus / Plus Query: 455 tgaacacacacctggcgtcaaacacattccttgttggacattctgtcactctggctgata 514 ||||||||||||| || |||||||||| ||||||||| ||| |||| ||||| ||||| | Sbjct: 541 tgaacacacaccttgcctcaaacacataccttgttgggcatgctgttactctagctgaca 600 Query: 515 ttgtcatgacatgcaacct 533 |||| |||||||||||||| Sbjct: 601 ttgtaatgacatgcaacct 619 Score = 77.8 bits (39), Expect = 3e-11 Identities = 163/204 (79%), Gaps = 14/204 (6%) Strand = Plus / Plus Query: 84 acttattgctgcagagtactgtggggtcaaggttgagctgcccaagaactttga------ 137 ||||||||||||||| ||| ||||| ||||||||||| || ||||| | ||||| Sbjct: 164 acttattgctgcagaatacagtgggatcaaggttgagttgaccaaggattttgagatnnn 223 Query: 138 ----gatgggtgtatcaaacaaaacccctgaattcatcaagatgaatccccttgggaagg 193 ||||||||| || ||||| |||||||| || | |||||||| ||||||||| Sbjct: 224 nnnagatgggtgtctcgaacaagacccctgagtttctaaagatgaannnnnttgggaagg 283 Query: 194 tccctgttcttgagactcctgatggtgctgtttttgagagcaatgctattgcacgctatg 253 | |||||||| |||||||||||||| ||| ||||||||| |||||||| | ||||||| Sbjct: 284 t-cctgttctggagactcctgatggccctg-ttttgagagtaatgctat--cgcgctatg 339 Query: 254 ttgctcgctcaaagggtgacaacc 277 ||||||||| |||| |||||||| Sbjct: 340 ttgctcgcttgaaggatgacaacc 363 Score = 71.9 bits (36), Expect = 2e-09 Identities = 176/218 (80%), Gaps = 6/218 (2%) Strand = Plus / Plus Query: 137 agatgggtgtatcaaacaaaacccctgaattcatcaagatgaatccccttgggaaggtcc 196 |||||||||| || ||||| |||||||| || | |||||||| |||||||||||| Sbjct: 227 agatgggtgtctcgaacaagacccctgagtttctaaagatgaannnnnttgggaaggtcc 286 Query: 197 ctgttcttgagactcctgatggtgctgtttttgagagcaatgctattgcacgctatgttg 256 |||||| |||||||||||||| ||||||| ||||| |||||||| || ||||||||| Sbjct: 287 -tgttctggagactcctgatggccctgtttt-gagagtaatgctatcgc--gctatgttg 342 Query: 257 ctcgctcaaagggtgacaacctgct-ttggggtggttctcttattgaatatgcacgtgtt 315 |||||| |||| |||||||| || || |||| ||| | ||||||| | || | ||| Sbjct: 343 ctcgcttgaaggatgacaaccctctgtttgggtc-ttcccgtattgaacaagcccacgtt 401 Query: 316 gagcaatggatggacttcgctgccacagaggttgatcc 353 |||||||||||||| || || || ||||| |||||||| Sbjct: 402 gagcaatggatggattttgccgcaacagaagttgatcc 439
>gb|BT013870.1| Lycopersicon esculentum clone 132850R, mRNA sequence Length = 1535 Score = 73.8 bits (37), Expect = 5e-10 Identities = 142/177 (80%) Strand = Plus / Plus Query: 63 caacaagaatgccttcaaggcacttattgctgcagagtactgtggggtcaaggttgagct 122 |||||| ||||||| |||||||| ||||| || |||||| || || |||||||| || Sbjct: 125 caacaaaaatgcctcaaaggcactcattgcagctgagtacacaggtgttaaggttgatct 184 Query: 123 gcccaagaactttgagatgggtgtatcaaacaaaacccctgaattcatcaagatgaatcc 182 | ||| |||| ||||||||||||| ||||| || ||||| || | |||||||||| Sbjct: 185 tgcaaaggacttccagatgggtgtatccaacaagacacctgagtttcttgagatgaatcc 244 Query: 183 ccttgggaaggtccctgttcttgagactcctgatggtgctgtttttgagagcaatgc 239 | |||| ||||| ||||| ||| | || |||||||| ||||||||||||||||||| Sbjct: 245 cattggaaaggttcctgtgcttcaaacacctgatggacctgtttttgagagcaatgc 301
>gb|DQ207868.1| Solanum tuberosum clone 085G10 unknown mRNA Length = 1546 Score = 69.9 bits (35), Expect = 8e-09 Identities = 98/119 (82%) Strand = Plus / Plus Query: 137 agatgggtgtatcaaacaaaacccctgaattcatcaagatgaatccccttgggaaggtcc 196 ||||||||||||||||||| || ||||| || | ||||||||||| |||| ||||| | Sbjct: 176 agatgggtgtatcaaacaagactcctgagtttcttgagatgaatcccattggaaaggttc 235 Query: 197 ctgttcttgagactcctgatggtgctgtttttgagagcaatgctattgcacgctatgtt 255 |||| ||| | || || ||| ||||||| ||||||||||||||||| ||||||||| Sbjct: 236 ctgtgcttcaaacaacttatgaacctgttttggagagcaatgctattgcccgctatgtt 294
>ref|NM_001036125.1| Arabidopsis thaliana translation elongation factor AT1G57720 transcript variant AT1G57720.2 mRNA, complete cds Length = 1632 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 455 tgaacacacacctggcgtcaaacacattccttgttggacattctgtcactctggctgata 514 |||||||||| || || || ||||| |||||||||||||| |||||||| || ||||||| Sbjct: 544 tgaacacacatctcgcctccaacactttccttgttggacactctgtcacccttgctgata 603 Query: 515 ttgtca 520 |||||| Sbjct: 604 ttgtca 609 Score = 54.0 bits (27), Expect = 5e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 172 aagatgaatccccttgggaaggtccctgttcttgagactcctgatggtgctgtttttgag 231 |||||||| || |||| ||||| ||||| |||||||||||||| ||| | | |||||| Sbjct: 261 aagatgaaccctattggaaaggttcctgtgcttgagactcctgaaggtcccatatttgag 320 Query: 232 agcaatgctattgcacgctatgt 254 |||||||| ||||| || ||||| Sbjct: 321 agcaatgccattgcccgatatgt 343 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 79 aaggcacttattgctgcagagta 101 ||||||||||||||||||||||| Sbjct: 168 aaggcacttattgctgcagagta 190
>ref|NM_104568.2| Arabidopsis thaliana translation elongation factor AT1G57720 transcript variant AT1G57720.1 mRNA, complete cds Length = 1650 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 455 tgaacacacacctggcgtcaaacacattccttgttggacattctgtcactctggctgata 514 |||||||||| || || || ||||| |||||||||||||| |||||||| || ||||||| Sbjct: 566 tgaacacacatctcgcctccaacactttccttgttggacactctgtcacccttgctgata 625 Query: 515 ttgtca 520 |||||| Sbjct: 626 ttgtca 631 Score = 54.0 bits (27), Expect = 5e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 172 aagatgaatccccttgggaaggtccctgttcttgagactcctgatggtgctgtttttgag 231 |||||||| || |||| ||||| ||||| |||||||||||||| ||| | | |||||| Sbjct: 283 aagatgaaccctattggaaaggttcctgtgcttgagactcctgaaggtcccatatttgag 342 Query: 232 agcaatgctattgcacgctatgt 254 |||||||| ||||| || ||||| Sbjct: 343 agcaatgccattgcccgatatgt 365 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 79 aaggcacttattgctgcagagta 101 ||||||||||||||||||||||| Sbjct: 190 aaggcacttattgctgcagagta 212
>gb|BT000973.1| Arabidopsis thaliana clone C104655 putative elongation factor 1B gamma (At1g57720) mRNA, complete cds Length = 1273 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 455 tgaacacacacctggcgtcaaacacattccttgttggacattctgtcactctggctgata 514 |||||||||| || || || ||||| |||||||||||||| |||||||| || ||||||| Sbjct: 422 tgaacacacatctcgcctccaacactttccttgttggacactctgtcacccttgctgata 481 Query: 515 ttgtca 520 |||||| Sbjct: 482 ttgtca 487 Score = 54.0 bits (27), Expect = 5e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 172 aagatgaatccccttgggaaggtccctgttcttgagactcctgatggtgctgtttttgag 231 |||||||| || |||| ||||| ||||| |||||||||||||| ||| | | |||||| Sbjct: 139 aagatgaaccctattggaaaggttcctgtgcttgagactcctgaaggtcccatatttgag 198 Query: 232 agcaatgctattgcacgctatgt 254 |||||||| ||||| || ||||| Sbjct: 199 agcaatgccattgcccgatatgt 221 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 79 aaggcacttattgctgcagagta 101 ||||||||||||||||||||||| Sbjct: 46 aaggcacttattgctgcagagta 68
>gb|AC079733.1| Arabidopsis thaliana chromosome 1 BAC T8L23 genomic sequence, complete sequence Length = 90448 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 455 tgaacacacacctggcgtcaaacacattccttgttggacattctgtcactctggctgata 514 |||||||||| || || || ||||| |||||||||||||| |||||||| || ||||||| Sbjct: 69632 tgaacacacatctcgcctccaacactttccttgttggacactctgtcacccttgctgata 69691 Query: 515 ttgtca 520 |||||| Sbjct: 69692 ttgtca 69697 Score = 46.1 bits (23), Expect = 0.12 Identities = 47/55 (85%) Strand = Plus / Plus Query: 191 aggtccctgttcttgagactcctgatggtgctgtttttgagagcaatgctattgc 245 |||| ||||| |||||||||||||| ||| | | |||||||||||||| ||||| Sbjct: 69026 aggttcctgtgcttgagactcctgaaggtcccatatttgagagcaatgccattgc 69080 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 79 aaggcacttattgctgcagagta 101 ||||||||||||||||||||||| Sbjct: 68836 aaggcacttattgctgcagagta 68858
>gb|AY035082.1| Arabidopsis thaliana putative elongation factor 1B gamma (At1g57720) mRNA, complete cds Length = 1524 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 455 tgaacacacacctggcgtcaaacacattccttgttggacattctgtcactctggctgata 514 |||||||||| || || || ||||| |||||||||||||| |||||||| || ||||||| Sbjct: 525 tgaacacacatctcgcctccaacactttccttgttggacactctgtcacccttgctgata 584 Query: 515 ttgtca 520 |||||| Sbjct: 585 ttgtca 590 Score = 54.0 bits (27), Expect = 5e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 172 aagatgaatccccttgggaaggtccctgttcttgagactcctgatggtgctgtttttgag 231 |||||||| || |||| ||||| ||||| |||||||||||||| ||| | | |||||| Sbjct: 242 aagatgaaccctattggaaaggttcctgtgcttgagactcctgaaggtcccatatttgag 301 Query: 232 agcaatgctattgcacgctatgt 254 |||||||| ||||| || ||||| Sbjct: 302 agcaatgccattgcccgatatgt 324 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 79 aaggcacttattgctgcagagta 101 ||||||||||||||||||||||| Sbjct: 149 aaggcacttattgctgcagagta 171
>gb|AY113043.1| Arabidopsis thaliana At1g57720/T8L23_18 mRNA, complete cds Length = 1242 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 455 tgaacacacacctggcgtcaaacacattccttgttggacattctgtcactctggctgata 514 |||||||||| || || || ||||| |||||||||||||| |||||||| || ||||||| Sbjct: 422 tgaacacacatctcgcctccaacactttccttgttggacactctgtcacccttgctgata 481 Query: 515 ttgtca 520 |||||| Sbjct: 482 ttgtca 487 Score = 54.0 bits (27), Expect = 5e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 172 aagatgaatccccttgggaaggtccctgttcttgagactcctgatggtgctgtttttgag 231 |||||||| || |||| ||||| ||||| |||||||||||||| ||| | | |||||| Sbjct: 139 aagatgaaccctattggaaaggttcctgtgcttgagactcctgaaggtcccatatttgag 198 Query: 232 agcaatgctattgcacgctatgt 254 |||||||| ||||| || ||||| Sbjct: 199 agcaatgccattgcccgatatgt 221 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 79 aaggcacttattgctgcagagta 101 ||||||||||||||||||||||| Sbjct: 46 aaggcacttattgctgcagagta 68
>gb|AY064630.1| Arabidopsis thaliana unknown protein (At1g57720; T8L23.18) mRNA, complete cds Length = 1265 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 455 tgaacacacacctggcgtcaaacacattccttgttggacattctgtcactctggctgata 514 |||||||||| || || || ||||| |||||||||||||| |||||||| || ||||||| Sbjct: 422 tgaacacacatctcgcctccaacactttccttgttggacactctgtcacccttgctgata 481 Query: 515 ttgtca 520 |||||| Sbjct: 482 ttgtca 487 Score = 54.0 bits (27), Expect = 5e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 172 aagatgaatccccttgggaaggtccctgttcttgagactcctgatggtgctgtttttgag 231 |||||||| || |||| ||||| ||||| |||||||||||||| ||| | | |||||| Sbjct: 139 aagatgaaccctattggaaaggttcctgtgcttgagactcctgaaggtcccatatttgag 198 Query: 232 agcaatgctattgcacgctatgt 254 |||||||| ||||| || ||||| Sbjct: 199 agcaatgccattgcccgatatgt 221 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 79 aaggcacttattgctgcagagta 101 ||||||||||||||||||||||| Sbjct: 46 aaggcacttattgctgcagagta 68
>gb|AF428347.1|AF428347 Arabidopsis thaliana At1g57720/T8L23_18 mRNA, complete cds Length = 1569 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 455 tgaacacacacctggcgtcaaacacattccttgttggacattctgtcactctggctgata 514 |||||||||| || || || ||||| |||||||||||||| |||||||| || ||||||| Sbjct: 557 tgaacacacatctcgcctccaacactttccttgttggacactctgtcacccttgctgata 616 Query: 515 ttgtca 520 |||||| Sbjct: 617 ttgtca 622 Score = 54.0 bits (27), Expect = 5e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 172 aagatgaatccccttgggaaggtccctgttcttgagactcctgatggtgctgtttttgag 231 |||||||| || |||| ||||| ||||| |||||||||||||| ||| | | |||||| Sbjct: 274 aagatgaaccctattggaaaggttcctgtgcttgagactcctgaaggtcccatatttgag 333 Query: 232 agcaatgctattgcacgctatgt 254 |||||||| ||||| || ||||| Sbjct: 334 agcaatgccattgcccgatatgt 356 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 79 aaggcacttattgctgcagagta 101 ||||||||||||||||||||||| Sbjct: 181 aaggcacttattgctgcagagta 203
>gb|AF424630.1|AF424630 Arabidopsis thaliana At1g57720/T8L23_18 mRNA, complete cds Length = 1606 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 455 tgaacacacacctggcgtcaaacacattccttgttggacattctgtcactctggctgata 514 |||||||||| || || || ||||| |||||||||||||| |||||||| || ||||||| Sbjct: 523 tgaacacacatctcgcctccaacactttccttgttggacactctgtcacccttgctgata 582 Query: 515 ttgtca 520 |||||| Sbjct: 583 ttgtca 588 Score = 54.0 bits (27), Expect = 5e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 172 aagatgaatccccttgggaaggtccctgttcttgagactcctgatggtgctgtttttgag 231 |||||||| || |||| ||||| ||||| |||||||||||||| ||| | | |||||| Sbjct: 240 aagatgaaccctattggaaaggttcctgtgcttgagactcctgaaggtcccatatttgag 299 Query: 232 agcaatgctattgcacgctatgt 254 |||||||| ||||| || ||||| Sbjct: 300 agcaatgccattgcccgatatgt 322 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 79 aaggcacttattgctgcagagta 101 ||||||||||||||||||||||| Sbjct: 147 aaggcacttattgctgcagagta 169
>gb|AF370502.1|AF370502 Arabidopsis thaliana Unknown protein (T8L23.18) mRNA, complete cds Length = 1588 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 455 tgaacacacacctggcgtcaaacacattccttgttggacattctgtcactctggctgata 514 |||||||||| || || || ||||| |||||||||||||| |||||||| || ||||||| Sbjct: 525 tgaacacacatctcgcctccaacactttccttgttggacactctgtcacccttgctgata 584 Query: 515 ttgtca 520 |||||| Sbjct: 585 ttgtca 590 Score = 54.0 bits (27), Expect = 5e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 172 aagatgaatccccttgggaaggtccctgttcttgagactcctgatggtgctgtttttgag 231 |||||||| || |||| ||||| ||||| |||||||||||||| ||| | | |||||| Sbjct: 242 aagatgaaccctattggaaaggttcctgtgcttgagactcctgaaggtcccatatttgag 301 Query: 232 agcaatgctattgcacgctatgt 254 |||||||| ||||| || ||||| Sbjct: 302 agcaatgccattgcccgatatgt 324 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 79 aaggcacttattgctgcagagta 101 ||||||||||||||||||||||| Sbjct: 149 aaggcacttattgctgcagagta 171
>gb|AY085256.1| Arabidopsis thaliana clone 141963 mRNA, complete sequence Length = 1580 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 455 tgaacacacacctggcgtcaaacacattccttgttggacattctgtcactctggctgata 514 |||||||||| || || || ||||| |||||||||||||| |||||||| || ||||||| Sbjct: 567 tgaacacacatctcgcctccaacactttccttgttggacactctgtcacccttgctgata 626 Query: 515 ttgtca 520 |||||| Sbjct: 627 ttgtca 632 Score = 54.0 bits (27), Expect = 5e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 172 aagatgaatccccttgggaaggtccctgttcttgagactcctgatggtgctgtttttgag 231 |||||||| || |||| ||||| ||||| |||||||||||||| ||| | | |||||| Sbjct: 284 aagatgaaccctattggaaaggttcctgtgcttgagactcctgaaggtcccatatttgag 343 Query: 232 agcaatgctattgcacgctatgt 254 |||||||| ||||| || ||||| Sbjct: 344 agcaatgccattgcccgatatgt 366 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 79 aaggcacttattgctgcagagta 101 ||||||||||||||||||||||| Sbjct: 191 aaggcacttattgctgcagagta 213
>ref|NM_100836.2| Arabidopsis thaliana translation elongation factor AT1G09640 mRNA, complete cds Length = 1758 Score = 63.9 bits (32), Expect = 5e-07 Identities = 101/124 (81%) Strand = Plus / Plus Query: 131 actttgagatgggtgtatcaaacaaaacccctgaattcatcaagatgaatccccttggga 190 ||||| |||||||||| | ||||||||||||| ||| |||||||||| || |||| | Sbjct: 237 actttcagatgggtgtcactaacaaaacccctgcgttcctcaagatgaaccctattggaa 296 Query: 191 aggtccctgttcttgagactcctgatggtgctgtttttgagagcaatgctattgcacgct 250 |||| ||||| ||||||||||| || ||| | || ||||| ||||| || ||||| || | Sbjct: 297 aggttcctgtacttgagactcccgagggttcagtatttgaaagcaacgcaattgcccgtt 356 Query: 251 atgt 254 |||| Sbjct: 357 atgt 360
>gb|AY089154.1| Arabidopsis thaliana clone 39525 mRNA, complete sequence Length = 1749 Score = 63.9 bits (32), Expect = 5e-07 Identities = 101/124 (81%) Strand = Plus / Plus Query: 131 actttgagatgggtgtatcaaacaaaacccctgaattcatcaagatgaatccccttggga 190 ||||| |||||||||| | ||||||||||||| ||| |||||||||| || |||| | Sbjct: 229 actttcagatgggtgtcactaacaaaacccctgcgttcctcaagatgaaccctattggaa 288 Query: 191 aggtccctgttcttgagactcctgatggtgctgtttttgagagcaatgctattgcacgct 250 |||| ||||| ||||||||||| || ||| | || ||||| ||||| || ||||| || | Sbjct: 289 aggttcctgtacttgagactcccgagggttcagtatttgaaagcaacgcaattgcccgtt 348 Query: 251 atgt 254 |||| Sbjct: 349 atgt 352
>gb|AF475939.1| Glycine max elongation factor 1-gamma mRNA, complete cds Length = 1387 Score = 61.9 bits (31), Expect = 2e-06 Identities = 100/123 (81%) Strand = Plus / Plus Query: 133 tttgagatgggtgtatcaaacaaaacccctgaattcatcaagatgaatccccttgggaag 192 |||||||||||||| || || ||||| |||||||| ||||||| ||||| |||| ||| Sbjct: 119 tttgagatgggtgtctccaataaaactcctgaatttctcaagatcaatcctattggcaag 178 Query: 193 gtccctgttcttgagactcctgatggtgctgtttttgagagcaatgctattgcacgctat 252 || ||||| || || || || |||||| | | || ||||||||||| ||||| |||||| Sbjct: 179 gttcctgtgctggaaacccccgatggtccaatattcgagagcaatgccattgctcgctat 238 Query: 253 gtt 255 ||| Sbjct: 239 gtt 241
>gb|AC140549.12| Medicago truncatula clone mth2-28o14, complete sequence Length = 139778 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 137 agatgggtgtatcaaacaaaacccctgaattcatcaagatgaa 179 |||||||||| || |||||||||||| |||||||||| ||||| Sbjct: 43802 agatgggtgtttctaacaaaacccctcaattcatcaacatgaa 43760 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 208 actcctgatggtgctgtttttgagagcaatgctattgcacgctatg 253 |||||||||||| |||| |||||||| ||||| ||||| ||||||| Sbjct: 43651 actcctgatggtcctgtctttgagagtaatgccattgctcgctatg 43606
>emb|BX815484.1|CNS0ABHN Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS65ZF11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1489 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 455 tgaacacacacctggcgtcaaacacattccttgttggacattctgtcactctggctgata 514 |||||||||| || || || ||||| |||||||||||||| |||||||| ||||||| Sbjct: 471 tgaacacacatctcgcctccaacactttccttgttggacactctgtcaccggtgctgata 530 Query: 515 ttgtca 520 |||||| Sbjct: 531 ttgtca 536 Score = 46.1 bits (23), Expect = 0.12 Identities = 68/83 (81%) Strand = Plus / Plus Query: 172 aagatgaatccccttgggaaggtccctgttcttgagactcctgatggtgctgtttttgag 231 |||||||| || |||| ||||| ||||| |||||||||||||| ||| | | |||||| Sbjct: 188 aagatgaaccctattggaaaggttcctgtgcttgagactcctgaaggtcccatatttgag 247 Query: 232 agcaatgctattgcacgctatgt 254 ||| |||| ||||| || ||||| Sbjct: 248 agcgatgccattgcccgatatgt 270 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 80 aggcacttattgctgcagagta 101 |||||||||||||||||||||| Sbjct: 96 aggcacttattgctgcagagta 117
>gb|AF297712.1|AF297712 Prunus avium translation elongation factor 1-gamma mRNA, complete cds Length = 1526 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 226 tttgagagcaatgctattgcacgctatgttgctcgctcaaagggtgacaa 275 |||||||| ||||| |||||||| ||||||||||||| |||| |||||| Sbjct: 251 tttgagagtaatgccattgcacgttatgttgctcgcttgaaggctgacaa 300
>dbj|AB246880.1| Lethenteron japonicum EEF1G mRNA for eukaryotic elongation factor 1 gamma, partial cds Length = 1177 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Plus Query: 226 tttgagagcaatgctattgcacgctatgttgc 257 |||||||||||||| ||||||| ||||||||| Sbjct: 202 tttgagagcaatgccattgcacactatgttgc 233
>gb|AY130447.1| Petromyzon marinus eukaryotic translation elongation factor 1 gamma mRNA, partial cds Length = 1087 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Plus Query: 226 tttgagagcaatgctattgcacgctatgttgc 257 |||||||||||||| ||||||| ||||||||| Sbjct: 137 tttgagagcaatgccattgcacactatgttgc 168
>dbj|AP008980.1| Terrabacter sp. DBF63 plasmid pDBF1 genes, complete and partial cds Length = 70631 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 8 gggcgaggcctgcagctcctgc 29 |||||||||||||||||||||| Sbjct: 34653 gggcgaggcctgcagctcctgc 34674
>emb|AL136984.20| Human DNA sequence from clone RP11-52A20 on chromosome 1q24.1-24.3 Contains part of the POU2F1 gene for POU domain class 2 transcription factor 1, complete sequence Length = 169627 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 151 aacaaaacccctgaattcatc 171 ||||||||||||||||||||| Sbjct: 91304 aacaaaacccctgaattcatc 91284
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 61 ggcaacaagaatgccttcaag 81 ||||||||||||||||||||| Sbjct: 5562692 ggcaacaagaatgccttcaag 5562672
>gb|AC000132.1|F21M12 Sequence of BAC F21M12 from Arabidopsis thaliana chromosome 1, complete sequence Length = 146505 Score = 42.1 bits (21), Expect = 1.8 Identities = 42/49 (85%) Strand = Plus / Plus Query: 131 actttgagatgggtgtatcaaacaaaacccctgaattcatcaagatgaa 179 ||||| |||||||||| | ||||||||||||| ||| |||||||||| Sbjct: 7362 actttcagatgggtgtcactaacaaaacccctgcgttcctcaagatgaa 7410
>gb|AC102656.28| Mus musculus chromosome 5, clone RP23-15G1, complete sequence Length = 227533 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 508 gctgatattgtcatgacatg 527 |||||||||||||||||||| Sbjct: 41680 gctgatattgtcatgacatg 41699
>ref|XM_855807.1| PREDICTED: Canis familiaris hypothetical protein LOC608321, transcript variant 8 (LOC608322), mRNA Length = 1449 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 tttgagagcaatgctattgc 245 |||||||||||||||||||| Sbjct: 1214 tttgagagcaatgctattgc 1195
>ref|XM_855774.1| PREDICTED: Canis familiaris hypothetical protein LOC608321, transcript variant 7 (LOC608322), mRNA Length = 1425 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 tttgagagcaatgctattgc 245 |||||||||||||||||||| Sbjct: 1213 tttgagagcaatgctattgc 1194
>ref|XM_855747.1| PREDICTED: Canis familiaris hypothetical protein LOC608321, transcript variant 6 (LOC608322), mRNA Length = 1415 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 tttgagagcaatgctattgc 245 |||||||||||||||||||| Sbjct: 1180 tttgagagcaatgctattgc 1161
>ref|XM_855714.1| PREDICTED: Canis familiaris hypothetical protein LOC608321, transcript variant 5 (LOC608322), mRNA Length = 1274 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 tttgagagcaatgctattgc 245 |||||||||||||||||||| Sbjct: 1039 tttgagagcaatgctattgc 1020
>ref|XM_855616.1| PREDICTED: Canis familiaris hypothetical protein LOC608321, transcript variant 2 (LOC608322), mRNA Length = 922 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 tttgagagcaatgctattgc 245 |||||||||||||||||||| Sbjct: 687 tttgagagcaatgctattgc 668
>ref|XM_855578.1| PREDICTED: Canis familiaris similar to Elongation factor 1-gamma (EF-1-gamma) (eEF-1B gamma), transcript variant 7 (LOC608307), mRNA Length = 1454 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 tttgagagcaatgctattgc 245 |||||||||||||||||||| Sbjct: 242 tttgagagcaatgctattgc 261
>ref|XM_855547.1| PREDICTED: Canis familiaris similar to Elongation factor 1-gamma (EF-1-gamma) (eEF-1B gamma), transcript variant 6 (LOC608307), mRNA Length = 1399 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 tttgagagcaatgctattgc 245 |||||||||||||||||||| Sbjct: 236 tttgagagcaatgctattgc 255
>ref|XM_855517.1| PREDICTED: Canis familiaris similar to Elongation factor 1-gamma (EF-1-gamma) (eEF-1B gamma), transcript variant 5 (LOC608307), mRNA Length = 1324 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 tttgagagcaatgctattgc 245 |||||||||||||||||||| Sbjct: 236 tttgagagcaatgctattgc 255
>ref|XM_855485.1| PREDICTED: Canis familiaris similar to Elongation factor 1-gamma (EF-1-gamma) (eEF-1B gamma), transcript variant 4 (LOC608307), mRNA Length = 1231 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 tttgagagcaatgctattgc 245 |||||||||||||||||||| Sbjct: 236 tttgagagcaatgctattgc 255
>ref|XM_855447.1| PREDICTED: Canis familiaris similar to Elongation factor 1-gamma (EF-1-gamma) (eEF-1B gamma), transcript variant 3 (LOC608307), mRNA Length = 1364 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 tttgagagcaatgctattgc 245 |||||||||||||||||||| Sbjct: 236 tttgagagcaatgctattgc 255
>ref|XM_535412.2| PREDICTED: Canis familiaris similar to Elongation factor 1-gamma (EF-1-gamma) (eEF-1B gamma), transcript variant 1 (LOC608307), mRNA Length = 540 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 tttgagagcaatgctattgc 245 |||||||||||||||||||| Sbjct: 236 tttgagagcaatgctattgc 255
>ref|XM_807840.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053506223.30) partial mRNA Length = 2427 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 aagaatgccttcaaggcact 86 |||||||||||||||||||| Sbjct: 2331 aagaatgccttcaaggcact 2312
>ref|XM_809559.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053511717.120) partial mRNA Length = 2427 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 aagaatgccttcaaggcact 86 |||||||||||||||||||| Sbjct: 2331 aagaatgccttcaaggcact 2312
>gb|AC121917.2| Mus musculus BAC clone RP24-194F23 from 5, complete sequence Length = 178113 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 tttgagagcaatgctattgc 245 |||||||||||||||||||| Sbjct: 12682 tttgagagcaatgctattgc 12701
>gb|AF434671.1| Streptococcus sobrinus su1 gene, partial cds; cell division protein FtsK (ftsK) gene, complete cds; and su2 gene, partial cds Length = 3188 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 397 ttcaatgcccagtctgagga 416 |||||||||||||||||||| Sbjct: 1972 ttcaatgcccagtctgagga 1991
>ref|XM_505096.1| Yarrowia lipolytica CLIB122, YALI0F06791g predicted mRNA Length = 9633 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 73 gccttcaaggcacttattgctgcagagt 100 ||||||||||| || ||||||||||||| Sbjct: 697 gccttcaaggcgctgattgctgcagagt 724
>emb|AL110114.1|HSJ868P24 Human DNA sequence from clone RP5-868P24 on chromosome 20 Contains STSs and GSSs, complete sequence Length = 78371 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 190 aaggtccctgttcttgagac 209 |||||||||||||||||||| Sbjct: 3451 aaggtccctgttcttgagac 3432
>emb|AL663039.18| Mouse DNA sequence from clone RP23-50H23 on chromosome 11 Contains a novel gene and a CpG island, complete sequence Length = 219899 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 444 acttgaagcattgaacacac 463 |||||||||||||||||||| Sbjct: 34671 acttgaagcattgaacacac 34652 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 444 acttgaagcattgaacacac 463 |||||||||||||||||||| Sbjct: 34540 acttgaagcattgaacacac 34521
>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome Length = 2696255 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 104 gtggggtcaaggttgagctg 123 |||||||||||||||||||| Sbjct: 212671 gtggggtcaaggttgagctg 212652
>gb|AF372841.1| Streptococcus sobrinus FtsK-like protein (ftsK) gene, partial cds Length = 1340 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 397 ttcaatgcccagtctgagga 416 |||||||||||||||||||| Sbjct: 836 ttcaatgcccagtctgagga 855
>gb|AC092248.1|AC092248 Drosophila melanogaster, chromosome 2L, region 35X-35X, BAC clone BACR37K07, complete sequence Length = 157722 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 410 ctgaggaattcggcattgct 429 |||||||||||||||||||| Sbjct: 75095 ctgaggaattcggcattgct 75114
>emb|BX294669.8| Zebrafish DNA sequence from clone CH211-134K13 in linkage group 9, complete sequence Length = 180734 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 atgccttcaaggcacttatt 90 |||||||||||||||||||| Sbjct: 113879 atgccttcaaggcacttatt 113860
>emb|BX537133.3| Zebrafish DNA sequence from clone DKEY-90M5 in linkage group 20, complete sequence Length = 249791 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 tcaaagggtgacaacctgct 281 |||||||||||||||||||| Sbjct: 165047 tcaaagggtgacaacctgct 165028
>gb|AE003643.3| Drosophila melanogaster chromosome 2L, section 52 of 83 of the complete sequence Length = 236144 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 410 ctgaggaattcggcattgct 429 |||||||||||||||||||| Sbjct: 82438 ctgaggaattcggcattgct 82457
>gb|AC121845.3| Mus musculus BAC clone RP24-82B23 from 5, complete sequence Length = 217530 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 tttgagagcaatgctattgc 245 |||||||||||||||||||| Sbjct: 191056 tttgagagcaatgctattgc 191075
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 73 gccttcaaggcacttattgctgcagagt 100 ||||||||||| || ||||||||||||| Sbjct: 1000722 gccttcaaggcgctgattgctgcagagt 1000749
>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome Length = 2695903 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 104 gtggggtcaaggttgagctg 123 |||||||||||||||||||| Sbjct: 1408129 gtggggtcaaggttgagctg 1408148 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,390,588 Number of Sequences: 3902068 Number of extensions: 4390588 Number of successful extensions: 91872 Number of sequences better than 10.0: 78 Number of HSP's better than 10.0 without gapping: 78 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 91560 Number of HSP's gapped (non-prelim): 305 length of query: 533 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 510 effective length of database: 17,143,297,704 effective search space: 8743081829040 effective search space used: 8743081829040 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
