>VATA_HORVU (Q40002) Vacuolar ATP synthase catalytic subunit A (EC 3.6.3.14)|
           (V-ATPase subunit A) (Vacuolar proton pump alpha
           subunit) (V-ATPase 69 kDa subunit) (Fragment)
          Length = 580

 Score = 35.8 bits (81), Expect = 0.036
 Identities = 16/16 (100%), Positives = 16/16 (100%)
 Frame = +2

Query: 2   AVERAANADGHKITYA 49
           AVERAANADGHKITYA
Sbjct: 514 AVERAANADGHKITYA 529

>VATA_MAIZE (P49087) Vacuolar ATP synthase catalytic subunit A (EC 3.6.3.14)|
           (V-ATPase subunit A) (Vacuolar proton pump alpha
           subunit) (V-ATPase 69 kDa subunit) (Fragment)
          Length = 561

 Score = 30.8 bits (68), Expect = 1.1
 Identities = 13/16 (81%), Positives = 14/16 (87%)
 Frame = +2

Query: 2   AVERAANADGHKITYA 49
           AVERAA  DGHKITY+
Sbjct: 495 AVERAAGTDGHKITYS 510


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,563,390
Number of Sequences: 219361
Number of extensions: 14228
Number of successful extensions: 22
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 80,573,946
effective HSP length: 0
effective length of database: 80,573,946
effective search space used: 1933774704
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)