| Clone Name | bags12m01 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC018757.6| Homo sapiens chromosome 5 clone CTB-45J8, complete sequence Length = 186418 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 299 ggagtgaagcagcttcatctg 319 ||||||||||||||||||||| Sbjct: 174578 ggagtgaagcagcttcatctg 174598
>gb|AC008625.5|AC008625 Homo sapiens chromosome 5 clone CTB-157D17, complete sequence Length = 137592 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 299 ggagtgaagcagcttcatctg 319 ||||||||||||||||||||| Sbjct: 58716 ggagtgaagcagcttcatctg 58696
>gb|AC008675.5|AC008675 Homo sapiens chromosome 5 clone CTB-45I8, complete sequence Length = 186415 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 299 ggagtgaagcagcttcatctg 319 ||||||||||||||||||||| Sbjct: 11841 ggagtgaagcagcttcatctg 11821
>gb|AC148186.3| Saimiri boliviensis boliviensis clone CH254-359M10, complete sequence Length = 189199 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 455 gggaagcaggaggagcaagtc 475 ||||||||||||||||||||| Sbjct: 59354 gggaagcaggaggagcaagtc 59374
>ref|XM_659593.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN7081.2), mRNA Length = 1725 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 421 cactctgcctgcagatgttc 440 |||||||||||||||||||| Sbjct: 254 cactctgcctgcagatgttc 235
>gb|AC125039.4| Mus musculus BAC clone RP23-335C3 from chromosome 6, complete sequence Length = 222535 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 265 gcagaagcaggaagttcagg 284 |||||||||||||||||||| Sbjct: 77590 gcagaagcaggaagttcagg 77609
>emb|AL732479.6| Human DNA sequence from clone RP11-351D13 on chromosome 10, complete sequence Length = 97781 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 gtggagctggaggaagagac 204 |||||||||||||||||||| Sbjct: 80587 gtggagctggaggaagagac 80568
>emb|AJ296143.1|FRU296143 Fugu rubripes vipr1B gene for vasoactive intestinal peptide receptor, exons 1-12 Length = 9516 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 217 tgatctgggtgctgaagttg 236 |||||||||||||||||||| Sbjct: 9370 tgatctgggtgctgaagttg 9351
>emb|BX324123.4| Zebrafish DNA sequence from clone DKEY-106L3 in linkage group 10, complete sequence Length = 158061 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 337 tgcagaagttactgatgcag 356 |||||||||||||||||||| Sbjct: 38183 tgcagaagttactgatgcag 38164
>gb|AC068629.35| Homo sapiens 12 BAC RP11-162A11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 191117 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 gagctggaggaagagacaag 207 |||||||||||||||||||| Sbjct: 45581 gagctggaggaagagacaag 45600
>emb|AJ630611.1| Homo sapiens t(8;14)(q24;q32) translocation breakpoint in Burkitt's lymphoma, c-myc gene position 2334 Length = 250 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 454 tgggaagcaggaggagcaag 473 |||||||||||||||||||| Sbjct: 81 tgggaagcaggaggagcaag 100
>gb|AC107317.3| Mus musculus strain C57BL6/J chromosome 6 clone RP23-340A17, complete sequence Length = 228371 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 gtggagctggaggaagagac 204 |||||||||||||||||||| Sbjct: 144780 gtggagctggaggaagagac 144761
>gb|AC114488.3| Homo sapiens chromosome 1 clone RP11-73M7, complete sequence Length = 184854 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 gagctggaggaagagacaag 207 |||||||||||||||||||| Sbjct: 73592 gagctggaggaagagacaag 73611
>emb|AL355052.3|CNS05TC4 Human chromosome 14 DNA sequence BAC R-1070A8 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 179712 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 228 ctgaagttgccccgagtgaagtccctgt 255 |||||||||||| ||||||| ||||||| Sbjct: 83853 ctgaagttgcccagagtgaattccctgt 83880
>emb|AL122127.6|CNS01DT2 Human chromosome 14 DNA sequence BAC R-417P24 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 169802 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 454 tgggaagcaggaggagcaag 473 |||||||||||||||||||| Sbjct: 15619 tgggaagcaggaggagcaag 15600
>dbj|AP001077.6| Homo sapiens genomic DNA, chromosome 18 clone:RP11-767P20, complete sequence Length = 199652 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 186 tggagctggaggaagagaca 205 |||||||||||||||||||| Sbjct: 98900 tggagctggaggaagagaca 98881
>dbj|AP005482.4| Homo sapiens genomic DNA, chromosome 18 clone:RP11-973H7, complete sequence Length = 170560 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 186 tggagctggaggaagagaca 205 |||||||||||||||||||| Sbjct: 148378 tggagctggaggaagagaca 148359
>ref|NG_001019.4| Homo sapiens immunoglobulin heavy locus (IGH@) on chromosome 14 Length = 1279711 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 454 tgggaagcaggaggagcaag 473 |||||||||||||||||||| Sbjct: 1077619 tgggaagcaggaggagcaag 1077638
>gb|AC152000.3| Ornithorhynchus anatinus chromosome UNK clone OABb-501A1, complete sequence Length = 149165 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 265 gcagaagcaggaagttcagg 284 |||||||||||||||||||| Sbjct: 107955 gcagaagcaggaagttcagg 107936
>gb|U39737.1|HSU39737 Human Ig gamma-1 heavy chain switch region Length = 4171 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 454 tgggaagcaggaggagcaag 473 |||||||||||||||||||| Sbjct: 1633 tgggaagcaggaggagcaag 1652 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,968,135 Number of Sequences: 3902068 Number of extensions: 3968135 Number of successful extensions: 82462 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 20 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 82403 Number of HSP's gapped (non-prelim): 59 length of query: 515 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 492 effective length of database: 17,143,297,704 effective search space: 8434502470368 effective search space used: 8434502470368 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)