Clone Information

BLAST Search Result

Clone Name	bags12l08
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	RL71_ARATH (P60040) 60S ribosomal protein L7-1	209	2e-56
2	RL73_ARATH (Q9LHP1) 60S ribosomal protein L7-3	209	2e-56
3	RL72_ARATH (P60039) 60S ribosomal protein L7-2	211	1e-55
4	RL7_MOUSE (P14148) 60S ribosomal protein L7	166	5e-41
5	RL7_HUMAN (P18124) 60S ribosomal protein L7	166	5e-41
6	RL7_BOVIN (Q58DT1) 60S ribosomal protein L7	166	5e-41
7	RL7_RAT (P05426) 60S ribosomal protein L7	165	7e-41
8	RL7_YARLI (Q6C603) 60S ribosomal protein L7	165	9e-41
9	RL7_NEUCR (Q7SBD5) 60S ribosomal protein L7	158	8e-39
10	RL7_DICDI (P11874) 60S ribosomal protein L7	155	7e-38
11	RL7_DROME (P32100) 60S ribosomal protein L7	154	2e-37
12	RL7_CAEEL (O01802) 60S ribosomal protein L7	153	3e-37
13	RL7C_SCHPO (O60143) 60S ribosomal protein L7-C	151	1e-36
14	RL7B_SCHPO (P25457) 60S ribosomal protein L7-B	151	1e-36
15	RL7_ASHGO (Q755A7) 60S ribosomal protein L7	149	5e-36
16	RL7B_YEAST (Q12213) 60S ribosomal protein L7-B (L6B) (YL8B)	147	2e-35
17	RL7A_YEAST (P05737) 60S ribosomal protein L7-A (L6A) (YL8A) (RP11)	147	2e-35
18	RL7_DEBHA (Q6BTA4) 60S ribosomal protein L7	146	3e-35
19	RL7_CANGA (Q6FSN6) 60S ribosomal protein L7	142	6e-34
20	RL7A_SCHPO (P17937) 60S ribosomal protein L7-A	138	9e-33
21	RL7L_PONPY (Q5RAH8) Ribosomal protein L7-like 1	95	1e-19
22	RL7L_HUMAN (Q6DKI1) Ribosomal protein L7-like 1	93	5e-19
23	RL7_ENCCU (Q8SS93) 60S ribosomal protein L7	77	3e-14
24	RLP7_KLULA (P32102) Ribosome biogenesis protein RLP7	67	2e-11
25	RLP7_DEBHA (Q6BIF5) Ribosome biogenesis protein RLP7	63	6e-10
26	RLP7_YEAST (P40693) Ribosome biogenesis protein RLP7 (Ribosomal ...	63	6e-10
27	RLP7_CANGA (Q6FS36) Ribosome biogenesis protein RLP7	62	1e-09
28	RLP7_ASHGO (Q75ET5) Ribosome biogenesis protein RLP7	58	1e-08
29	RLP7_PICJA (P32101) Ribosome biogenesis protein RLP7 (Fragment)	54	3e-07
30	RL30_ARCFU (O28375) 50S ribosomal protein L30P	44	4e-04
31	RL30_PYRHO (O59440) 50S ribosomal protein L30P	40	0.003
32	RL30_PYRFU (Q9HH78) 50S ribosomal protein L30P (PfL30)	40	0.003
33	RL30_PYRAB (Q9V1V6) 50S ribosomal protein L30P	40	0.003
34	RL30_METVA (P14035) 50S ribosomal protein L30P	40	0.004
35	RL30_AERPE (Q9YF96) 50S ribosomal protein L30P	39	0.007
36	RL30_METTH (O26132) 50S ribosomal protein L30P	39	0.012
37	RL30_SULSO (Q9UX86) 50S ribosomal protein L30P	38	0.016
38	RL30_SULAC (O05642) 50S ribosomal protein L30P	38	0.021
39	RL30_METJA (P54046) 50S ribosomal protein L30P	38	0.021
40	DPOL_NPVLD (P30318) DNA polymerase (EC 2.7.7.7)	32	1.5
41	RL30_HALMA (P14121) 50S ribosomal protein L30P (Hmal30) (Hl20) (...	31	2.0
42	AX22B_PHAAU (P32294) Auxin-induced protein 22B (Indole-3-acetic ...	31	2.6
43	POL_CAMVD (P03556) Enzymatic polyprotein [Contains: Aspartic pro...	30	4.4
44	AX22D_PHAAU (O24542) Auxin-induced protein 22D (Indole-3-acetic ...	30	5.7
45	NUD17_HUMAN (P0C025) Putative nucleoside diphosphate-linked moie...	30	5.7
46	EEA1_HUMAN (Q15075) Early endosome antigen 1 (Endosome-associate...	29	7.5
47	NU5M_STRPU (P15552) NADH-ubiquinone oxidoreductase chain 5 (EC 1...	29	7.5
48	GOGA4_HUMAN (Q13439) Golgin subfamily A member 4 (Trans-Golgi p2...	29	7.5
49	POL_CAMVS (P03554) Enzymatic polyprotein [Contains: Aspartic pro...	29	9.7
50	POL_CAMVE (Q02964) Enzymatic polyprotein [Contains: Aspartic pro...	29	9.7
51	POL_CAMVC (P03555) Enzymatic polyprotein [Contains: Aspartic pro...	29	9.7
52	ZN516_HUMAN (Q92618) Zinc finger protein 516	29	9.7

>RL71_ARATH (P60040) 60S ribosomal protein L7-1|
          Length = 242

 Score =  209 bits (533), Expect(2) = 2e-56
 Identities = 101/125 (80%), Positives = 116/125 (92%)
 Frame = +2

Query: 167 NRKVIFARAKQYAEEYDAQDKELVQLKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKT 346
           NRK+IF RA+QY++EY  ++KEL+ LKREA++KGGFYV PEAKLLF++RIRGINA+ PKT
Sbjct: 40  NRKLIFKRAEQYSKEYAEKEKELISLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKT 99

Query: 347 KKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQ 526
           KKILQLLRLRQIFNGVFLKVNKAT+NMLRRVEPYV YG+PNLKSV+ELIYKRGYGKLN Q
Sbjct: 100 KKILQLLRLRQIFNGVFLKVNKATMNMLRRVEPYVTYGFPNLKSVKELIYKRGYGKLNHQ 159

Query: 527 RIPLT 541
           RI LT
Sbjct: 160 RIALT 164



 Score = 29.3 bits (64), Expect(2) = 2e-56
 Identities = 13/15 (86%), Positives = 13/15 (86%)
 Frame = +1

Query: 73  PESVLLKRKREELWA 117
           PESVL KRKREE WA
Sbjct: 9   PESVLKKRKREEEWA 23

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>RL73_ARATH (Q9LHP1) 60S ribosomal protein L7-3|
          Length = 244

 Score =  209 bits (532), Expect(2) = 2e-56
 Identities = 101/124 (81%), Positives = 115/124 (92%)
 Frame = +2

Query: 170 RKVIFARAKQYAEEYDAQDKELVQLKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTK 349
           RK+IF RAKQY++EY  +++EL+QLKREA++KGGFYV PEAKLLF++RIRGINA+ PKTK
Sbjct: 43  RKLIFNRAKQYSKEYQEKERELIQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTK 102

Query: 350 KILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQR 529
           KILQLLRLRQIFNGVFLKVNKATINMLRRVEPYV YGYPNLKSV+ELIYKRG+GKLN QR
Sbjct: 103 KILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVTYGYPNLKSVKELIYKRGFGKLNHQR 162

Query: 530 IPLT 541
             LT
Sbjct: 163 TALT 166



 Score = 29.3 bits (64), Expect(2) = 2e-56
 Identities = 13/15 (86%), Positives = 13/15 (86%)
 Frame = +1

Query: 73  PESVLLKRKREELWA 117
           PESVL KRKREE WA
Sbjct: 11  PESVLKKRKREEEWA 25

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>RL72_ARATH (P60039) 60S ribosomal protein L7-2|
          Length = 242

 Score =  211 bits (536), Expect(2) = 1e-55
 Identities = 102/124 (82%), Positives = 115/124 (92%)
 Frame = +2

Query: 170 RKVIFARAKQYAEEYDAQDKELVQLKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTK 349
           RK+IF RA+QYA+EY  +D EL++LKREA++KGGFYV PEAKLLF++RIRGINA+ PKTK
Sbjct: 41  RKLIFKRAEQYAKEYAEKDNELIRLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTK 100

Query: 350 KILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQR 529
           KILQLLRLRQIFNGVFLKVNKAT+NMLRRVEPYV YGYPNLKSV+ELIYKRGYGKLN QR
Sbjct: 101 KILQLLRLRQIFNGVFLKVNKATVNMLRRVEPYVTYGYPNLKSVKELIYKRGYGKLNHQR 160

Query: 530 IPLT 541
           I LT
Sbjct: 161 IALT 164



 Score = 25.0 bits (53), Expect(2) = 1e-55
 Identities = 11/15 (73%), Positives = 12/15 (80%)
 Frame = +1

Query: 73  PESVLLKRKREELWA 117
           PESVL K KR+E WA
Sbjct: 9   PESVLKKIKRQEEWA 23

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>RL7_MOUSE (P14148) 60S ribosomal protein L7|
          Length = 270

 Score =  166 bits (419), Expect = 5e-41
 Identities = 80/124 (64%), Positives = 99/124 (79%)
 Frame = +2

Query: 170 RKVIFARAKQYAEEYDAQDKELVQLKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTK 349
           RK+I+ +AK Y +EY    +  +++ R AR  G FYV  E KL FV+RIRGIN + PK +
Sbjct: 69  RKLIYEKAKHYHKEYRQMYRTEIRMARMARKAGNFYVPAEPKLAFVIRIRGINGVSPKVR 128

Query: 350 KILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQR 529
           K+LQLLRLRQIFNG F+K+NKA+INMLR VEPY+A+GYPNLKSV ELIYKRGYGK+NK+R
Sbjct: 129 KVLQLLRLRQIFNGTFVKLNKASINMLRIVEPYIAWGYPNLKSVNELIYKRGYGKINKKR 188

Query: 530 IPLT 541
           I LT
Sbjct: 189 IALT 192

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>RL7_HUMAN (P18124) 60S ribosomal protein L7|
          Length = 248

 Score =  166 bits (419), Expect = 5e-41
 Identities = 80/124 (64%), Positives = 99/124 (79%)
 Frame = +2

Query: 170 RKVIFARAKQYAEEYDAQDKELVQLKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTK 349
           RK+I+ +AK Y +EY    +  +++ R AR  G FYV  E KL FV+RIRGIN + PK +
Sbjct: 47  RKLIYEKAKHYHKEYRQMYRTEIRMARMARKAGNFYVPAEPKLAFVIRIRGINGVSPKVR 106

Query: 350 KILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQR 529
           K+LQLLRLRQIFNG F+K+NKA+INMLR VEPY+A+GYPNLKSV ELIYKRGYGK+NK+R
Sbjct: 107 KVLQLLRLRQIFNGTFVKLNKASINMLRIVEPYIAWGYPNLKSVNELIYKRGYGKINKKR 166

Query: 530 IPLT 541
           I LT
Sbjct: 167 IALT 170

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>RL7_BOVIN (Q58DT1) 60S ribosomal protein L7|
          Length = 248

 Score =  166 bits (419), Expect = 5e-41
 Identities = 80/124 (64%), Positives = 99/124 (79%)
 Frame = +2

Query: 170 RKVIFARAKQYAEEYDAQDKELVQLKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTK 349
           RK+I+ +AK Y +EY    +  +++ R AR  G FYV  E KL FV+RIRGIN + PK +
Sbjct: 47  RKLIYEKAKHYHKEYRQMYRTEIRMARMARKAGNFYVPAEPKLAFVIRIRGINGVSPKVR 106

Query: 350 KILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQR 529
           K+LQLLRLRQIFNG F+K+NKA+INMLR VEPY+A+GYPNLKSV ELIYKRGYGK+NK+R
Sbjct: 107 KVLQLLRLRQIFNGTFVKLNKASINMLRIVEPYIAWGYPNLKSVNELIYKRGYGKINKKR 166

Query: 530 IPLT 541
           I LT
Sbjct: 167 IALT 170

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>RL7_RAT (P05426) 60S ribosomal protein L7|
          Length = 260

 Score =  165 bits (418), Expect = 7e-41
 Identities = 79/124 (63%), Positives = 99/124 (79%)
 Frame = +2

Query: 170 RKVIFARAKQYAEEYDAQDKELVQLKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTK 349
           RK+I+ +AK Y +EY    +  +++ R AR  G FYV  E KL FV+RIRGIN + PK +
Sbjct: 59  RKLIYEKAKHYHKEYRQMYRTEIRMARMARKAGNFYVPAEPKLAFVIRIRGINGVSPKVR 118

Query: 350 KILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQR 529
           K+LQLLRLRQIFNG F+K+NKA++NMLR VEPY+A+GYPNLKSV ELIYKRGYGK+NK+R
Sbjct: 119 KVLQLLRLRQIFNGTFVKLNKASVNMLRIVEPYIAWGYPNLKSVNELIYKRGYGKINKKR 178

Query: 530 IPLT 541
           I LT
Sbjct: 179 IALT 182

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>RL7_YARLI (Q6C603) 60S ribosomal protein L7|
          Length = 250

 Score =  165 bits (417), Expect = 9e-41
 Identities = 76/123 (61%), Positives = 103/123 (83%)
 Frame = +2

Query: 173 KVIFARAKQYAEEYDAQDKELVQLKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKK 352
           KVIF+RA++Y +EY   ++E ++L+REA++ G FYV  E KL+FV+RI+GI+ M PK +K
Sbjct: 48  KVIFSRAEKYVKEYREAEREQIRLRREAKLNGTFYVPAEPKLVFVIRIKGISKMAPKPRK 107

Query: 353 ILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQRI 532
           +LQLLRL QI NGVF+++ KAT  +LR VEPY+A+GYPNL SVR+L+YKRGYGK+NKQRI
Sbjct: 108 VLQLLRLHQINNGVFVRITKATAELLRIVEPYIAFGYPNLASVRQLVYKRGYGKVNKQRI 167

Query: 533 PLT 541
           PL+
Sbjct: 168 PLS 170

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>RL7_NEUCR (Q7SBD5) 60S ribosomal protein L7|
          Length = 248

 Score =  158 bits (400), Expect = 8e-39
 Identities = 76/124 (61%), Positives = 100/124 (80%)
 Frame = +2

Query: 170 RKVIFARAKQYAEEYDAQDKELVQLKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTK 349
           R VIF RA+ Y +EY   ++E ++L+R A+  G F++  EAKL+F++RI+GIN + PK +
Sbjct: 46  RAVIFKRAETYVKEYRDVEREKIRLQRAAKQDGSFHIPAEAKLIFLIRIKGINKIPPKPR 105

Query: 350 KILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQR 529
           KILQLLRL QI NGVF++V KAT  M++ VEP+VAYGYPNLKSV+ELIYKRGYGK+NKQR
Sbjct: 106 KILQLLRLLQINNGVFVRVTKATAEMIKIVEPWVAYGYPNLKSVKELIYKRGYGKVNKQR 165

Query: 530 IPLT 541
           + LT
Sbjct: 166 VALT 169

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>RL7_DICDI (P11874) 60S ribosomal protein L7|
          Length = 245

 Score =  155 bits (392), Expect = 7e-38
 Identities = 74/122 (60%), Positives = 98/122 (80%)
 Frame = +2

Query: 176 VIFARAKQYAEEYDAQDKELVQLKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKKI 355
           V F RA++Y  EY   ++E ++L R A+  G FYV P AK+ FV+RIRGIN + PK +K+
Sbjct: 46  VYFKRAEKYVSEYHKTEREAIRLNRIAKNSGTFYVPPAAKVAFVIRIRGINGVSPKPRKV 105

Query: 356 LQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQRIP 535
           L+LLRL Q+ NGVF+K+NKA+INML+ VEPYVAYG+PNLKS++ELIYKRG+ K++ QRIP
Sbjct: 106 LKLLRLLQLNNGVFVKLNKASINMLKLVEPYVAYGFPNLKSIKELIYKRGHLKIDGQRIP 165

Query: 536 LT 541
           LT
Sbjct: 166 LT 167

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>RL7_DROME (P32100) 60S ribosomal protein L7|
          Length = 252

 Score =  154 bits (388), Expect = 2e-37
 Identities = 75/124 (60%), Positives = 96/124 (77%)
 Frame = +2

Query: 170 RKVIFARAKQYAEEYDAQDKELVQLKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTK 349
           +K    RA++Y  EY   ++  ++L+R A+ +  FYV  EAKL FVVRIRGIN + PK +
Sbjct: 50  KKENLVRAEKYQNEYIKAEQREIKLRRLAKKRNQFYVPAEAKLAFVVRIRGINKVAPKVR 109

Query: 350 KILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQR 529
           K+LQL RLRQI NGVF+K+NKATINMLR  EPY+ +GYPNLKSVRELIYKRG+ K N+QR
Sbjct: 110 KVLQLFRLRQINNGVFIKLNKATINMLRIAEPYITWGYPNLKSVRELIYKRGFVKHNRQR 169

Query: 530 IPLT 541
           +P+T
Sbjct: 170 VPIT 173

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>RL7_CAEEL (O01802) 60S ribosomal protein L7|
          Length = 244

 Score =  153 bits (386), Expect = 3e-37
 Identities = 72/120 (60%), Positives = 95/120 (79%)
 Frame = +2

Query: 182 FARAKQYAEEYDAQDKELVQLKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKKILQ 361
           F RA++Y +EY    KE ++LKREA  KG FYV  E K+ FVVRIRGIN +HPK +K LQ
Sbjct: 47  FKRAEKYVQEYRNAQKEGLRLKREAEAKGDFYVPAEHKVAFVVRIRGINQLHPKPRKALQ 106

Query: 362 LLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQRIPLT 541
           +LRLRQI NGVF+K+NKAT+ +LR +EPYVA+GYPN K++ +L+YKRGY K++  R+P+T
Sbjct: 107 ILRLRQINNGVFVKLNKATLPLLRIIEPYVAWGYPNNKTIHDLLYKRGYAKVDGNRVPIT 166

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>RL7C_SCHPO (O60143) 60S ribosomal protein L7-C|
          Length = 251

 Score =  151 bits (382), Expect = 1e-36
 Identities = 75/124 (60%), Positives = 97/124 (78%)
 Frame = +2

Query: 170 RKVIFARAKQYAEEYDAQDKELVQLKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTK 349
           R++I  RA+ Y  EY   ++E ++L R+AR +G +YV  E KL+FV+RIRGIN + PK +
Sbjct: 49  RELIAKRAESYDAEYRKAEREQIELGRKARAEGNYYVPDETKLVFVIRIRGINNIPPKAR 108

Query: 350 KILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQR 529
           KI+QLLRL QI NGVF+K NKAT  ML+ VEPYV YG PNLK+VREL+YKRG+GK+NKQR
Sbjct: 109 KIMQLLRLIQINNGVFVKFNKATKEMLQVVEPYVTYGIPNLKTVRELLYKRGFGKVNKQR 168

Query: 530 IPLT 541
           I L+
Sbjct: 169 IALS 172

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>RL7B_SCHPO (P25457) 60S ribosomal protein L7-B|
          Length = 250

 Score =  151 bits (381), Expect = 1e-36
 Identities = 75/124 (60%), Positives = 97/124 (78%)
 Frame = +2

Query: 170 RKVIFARAKQYAEEYDAQDKELVQLKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTK 349
           R++I  RA+ Y  EY A ++E ++L R+AR +G ++V  E KL+FVVRIRGIN + PK +
Sbjct: 48  RELIAKRAEAYEAEYRAAEREQIELARKARAEGNYFVPHEPKLIFVVRIRGINNIPPKAR 107

Query: 350 KILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQR 529
           KI+QLLRL QI NG+F+K NKA   ML+ VEPYV YG PN K+VRELIYKRG+GK+NKQR
Sbjct: 108 KIMQLLRLLQINNGIFVKFNKAIKEMLQVVEPYVTYGIPNHKTVRELIYKRGFGKVNKQR 167

Query: 530 IPLT 541
           IPL+
Sbjct: 168 IPLS 171

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>RL7_ASHGO (Q755A7) 60S ribosomal protein L7|
          Length = 243

 Score =  149 bits (376), Expect = 5e-36
 Identities = 69/124 (55%), Positives = 94/124 (75%)
 Frame = +2

Query: 170 RKVIFARAKQYAEEYDAQDKELVQLKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTK 349
           R  I  R   Y +EY+  ++ ++Q KREA+  G +YV  + KL+FV+RI+GIN + PK +
Sbjct: 40  RAAILERNAAYHKEYETAERAVIQAKREAKANGSYYVESQPKLVFVIRIKGINKIAPKPR 99

Query: 350 KILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQR 529
           K+LQLLRL QI +GVF+KV KAT  +LR VEPYVAYGYP+  ++R+L+YKRGYGK+NKQR
Sbjct: 100 KVLQLLRLNQINSGVFVKVTKATTELLRLVEPYVAYGYPSYSTIRQLVYKRGYGKINKQR 159

Query: 530 IPLT 541
           I L+
Sbjct: 160 IALS 163

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>RL7B_YEAST (Q12213) 60S ribosomal protein L7-B (L6B) (YL8B)|
          Length = 243

 Score =  147 bits (371), Expect = 2e-35
 Identities = 64/124 (51%), Positives = 96/124 (77%)
 Frame = +2

Query: 170 RKVIFARAKQYAEEYDAQDKELVQLKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTK 349
           R +I  R   Y +EY+  ++ ++Q KR+A+  G +YV  + KL+FVVRI+GIN + PK +
Sbjct: 40  RAIILERNAAYQKEYETAERNIIQAKRDAKAAGSYYVEAQHKLVFVVRIKGINKIPPKPR 99

Query: 350 KILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQR 529
           K+LQLLRL +I +G F+KV KAT+ +L+ +EPYVAYGYP+  ++R+L+YKRG+GK+NKQR
Sbjct: 100 KVLQLLRLTRINSGTFVKVTKATLELLKLIEPYVAYGYPSYSTIRQLVYKRGFGKINKQR 159

Query: 530 IPLT 541
           +PL+
Sbjct: 160 VPLS 163

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>RL7A_YEAST (P05737) 60S ribosomal protein L7-A (L6A) (YL8A) (RP11)|
          Length = 243

 Score =  147 bits (371), Expect = 2e-35
 Identities = 64/124 (51%), Positives = 96/124 (77%)
 Frame = +2

Query: 170 RKVIFARAKQYAEEYDAQDKELVQLKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTK 349
           R +I  R   Y +EY+  ++ ++Q KR+A+  G +YV  + KL+FVVRI+GIN + PK +
Sbjct: 40  RAIILERNAAYQKEYETAERNIIQAKRDAKAAGSYYVEAQHKLVFVVRIKGINKIPPKPR 99

Query: 350 KILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQR 529
           K+LQLLRL +I +G F+KV KAT+ +L+ +EPYVAYGYP+  ++R+L+YKRG+GK+NKQR
Sbjct: 100 KVLQLLRLTRINSGTFVKVTKATLELLKLIEPYVAYGYPSYSTIRQLVYKRGFGKINKQR 159

Query: 530 IPLT 541
           +PL+
Sbjct: 160 VPLS 163

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>RL7_DEBHA (Q6BTA4) 60S ribosomal protein L7|
          Length = 241

 Score =  146 bits (369), Expect = 3e-35
 Identities = 67/124 (54%), Positives = 95/124 (76%)
 Frame = +2

Query: 170 RKVIFARAKQYAEEYDAQDKELVQLKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTK 349
           RK+IF RA  Y +EY   ++ +++ KR+A+  G +YV  + KL+FVVRI+GIN + PK +
Sbjct: 39  RKIIFDRAAAYQKEYTDAERAVIKAKRDAKAAGSYYVDAQPKLVFVVRIKGINKIAPKPR 98

Query: 350 KILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQR 529
           K+LQLLRL QI  GVF+++ KAT  +L+  EPY+AYGYPNL ++R L+YKRG+GK+NKQR
Sbjct: 99  KVLQLLRLTQINAGVFVRLTKATSELLKLAEPYIAYGYPNLSTIRHLVYKRGHGKINKQR 158

Query: 530 IPLT 541
           I L+
Sbjct: 159 IALS 162

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>RL7_CANGA (Q6FSN6) 60S ribosomal protein L7|
          Length = 244

 Score =  142 bits (358), Expect = 6e-34
 Identities = 66/124 (53%), Positives = 93/124 (75%)
 Frame = +2

Query: 170 RKVIFARAKQYAEEYDAQDKELVQLKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTK 349
           R  I  R   + +EY+A ++ ++  KREA+  G +YV  + KL+FVVRI+GIN + PK +
Sbjct: 41  RAAILERNAAHQKEYEAAERAVIDAKREAKASGSYYVEAQPKLVFVVRIKGINKIPPKPR 100

Query: 350 KILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQR 529
           K+LQLLRL QI +G F+KV KAT  +L+ +EPYVAYGYP+  +VR+L+YKRG+GK+NKQR
Sbjct: 101 KVLQLLRLTQINSGTFVKVTKATSELLKLIEPYVAYGYPSYSTVRQLVYKRGHGKINKQR 160

Query: 530 IPLT 541
           I L+
Sbjct: 161 IALS 164

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>RL7A_SCHPO (P17937) 60S ribosomal protein L7-A|
          Length = 249

 Score =  138 bits (348), Expect = 9e-33
 Identities = 69/125 (55%), Positives = 89/125 (71%)
 Frame = +2

Query: 167 NRKVIFARAKQYAEEYDAQDKELVQLKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKT 346
           NRK  F RA+ +   Y  +++E ++L R A+ KG  +V  E KLLFV+RI G+  M PK 
Sbjct: 46  NRKETFKRAETFINNYRQRERERIRLNRSAKNKGDIFVPDETKLLFVIRIAGVKNMPPKI 105

Query: 347 KKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQ 526
           +K+L+LLRL +I N VF++ NKA   MLR VEPYV YG PNL SVRELIYKRG+GK+N Q
Sbjct: 106 RKVLRLLRLSRINNAVFVRNNKAVAQMLRIVEPYVMYGIPNLHSVRELIYKRGFGKINGQ 165

Query: 527 RIPLT 541
           RI L+
Sbjct: 166 RIALS 170

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>RL7L_PONPY (Q5RAH8) Ribosomal protein L7-like 1|
          Length = 246

 Score = 95.1 bits (235), Expect = 1e-19
 Identities = 50/120 (41%), Positives = 74/120 (61%)
 Frame = +2

Query: 182 FARAKQYAEEYDAQDKELVQLKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKKILQ 361
           F R + +  +   Q +++V+L+R         +  +  L FVVRI  I+ +    ++ + 
Sbjct: 49  FKRLESFLHDSWRQKRDMVRLRRLEMKPHALELPDKHSLAFVVRIERIDGVSLLVQRTIA 108

Query: 362 LLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQRIPLT 541
            LRL++IF+GVF+KV    + MLR VEPYV +G+PNLKSVRELI KRG  K+  + IPLT
Sbjct: 109 RLRLKKIFSGVFVKVTPQNLKMLRIVEPYVTWGFPNLKSVRELILKRGQAKVKNKTIPLT 168

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>RL7L_HUMAN (Q6DKI1) Ribosomal protein L7-like 1|
          Length = 246

 Score = 92.8 bits (229), Expect = 5e-19
 Identities = 50/120 (41%), Positives = 73/120 (60%)
 Frame = +2

Query: 182 FARAKQYAEEYDAQDKELVQLKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKKILQ 361
           F R + +  +   Q ++ V+L+R         +  +  L FVVRI  I+ +    ++ + 
Sbjct: 49  FKRLESFLHDSWRQKRDKVRLRRLEVKPHALELPDKHSLAFVVRIERIDGVSLLVQRTIA 108

Query: 362 LLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQRIPLT 541
            LRL++IF+GVF+KV    + MLR VEPYV +G+PNLKSVRELI KRG  K+  + IPLT
Sbjct: 109 RLRLKKIFSGVFVKVTPQNLKMLRIVEPYVTWGFPNLKSVRELILKRGQAKVKNKTIPLT 168

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>RL7_ENCCU (Q8SS93) 60S ribosomal protein L7|
          Length = 239

 Score = 77.0 bits (188), Expect = 3e-14
 Identities = 44/123 (35%), Positives = 75/123 (60%), Gaps = 8/123 (6%)
 Frame = +2

Query: 197 QYAEE--------YDAQDKELVQLKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKK 352
           +YAEE        Y  Q++E+  L++++ MK GFYV  EA+   V+ IR      PK +K
Sbjct: 42  RYAEETTEKLLNKYYEQEREI--LEKKSSMKNGFYVPKEAEFFAVILIRSKCNCPPKVRK 99

Query: 353 ILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQRI 532
           +L+L RL++I   V ++ NK+T  ML+ ++ +VA+G   ++ +R+L+Y +G G+    R+
Sbjct: 100 VLELFRLKRINTCVLVRNNKSTRKMLQIIKDHVAFGTIGMELLRKLVYTKGSGRNGHVRV 159

Query: 533 PLT 541
            LT
Sbjct: 160 KLT 162

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>RLP7_KLULA (P32102) Ribosome biogenesis protein RLP7|
          Length = 318

 Score = 67.4 bits (163), Expect = 2e-11
 Identities = 41/108 (37%), Positives = 62/108 (57%), Gaps = 2/108 (1%)
 Frame = +2

Query: 185 ARAKQYAEEYDAQDKELVQLKREARMKGGFYVSPEAKLLFVVRIRGINAMH--PKTKKIL 358
           A ++   ++ D +D+E   L RE  +  G     E  LLFV+R++G  A+    K  K+L
Sbjct: 105 ATSESELQDVDEEDEEDDGLIREKIVYDG-----EPSLLFVIRVKGPTAVKIPAKAYKVL 159

Query: 359 QLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKR 502
            LLRL ++  GVF+K+ K    +L+ V PY+  G P+L S+R LI KR
Sbjct: 160 SLLRLVELNTGVFIKLTKDVYPLLKLVSPYIVIGQPSLASIRSLIQKR 207

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>RLP7_DEBHA (Q6BIF5) Ribosome biogenesis protein RLP7|
          Length = 275

 Score = 62.8 bits (151), Expect = 6e-10
 Identities = 38/120 (31%), Positives = 63/120 (52%), Gaps = 13/120 (10%)
 Frame = +2

Query: 182 FARAKQYAEEYDAQDKELVQLKREARMKGGFYVSP---------EAKLLFVVRI----RG 322
           F RA+     Y + + E  ++K   + +                 AKLLF++RI    +G
Sbjct: 47  FVRAETLVSNYKSNELENKRIKHITKFEKQLQADKISQAKEDDESAKLLFIIRIPDHTKG 106

Query: 323 INAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKR 502
           +  +  K +K+L LLRL +   GVF+K+  AT+ +L+ + PY+  G P+L S+R+L  KR
Sbjct: 107 LK-VPSKARKVLHLLRLNRPNTGVFVKLTPATVPLLKLISPYIVAGKPSLNSIRKLFQKR 165

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>RLP7_YEAST (P40693) Ribosome biogenesis protein RLP7 (Ribosomal protein|
           L7-like)
          Length = 322

 Score = 62.8 bits (151), Expect = 6e-10
 Identities = 35/72 (48%), Positives = 47/72 (65%), Gaps = 2/72 (2%)
 Frame = +2

Query: 296 LLFVVRIRGINAMHPKTK--KILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPN 469
           LLF+VR+RG  A++   K  KIL LLRL +   GVF+K+ K    +L+ + PYV  G P+
Sbjct: 141 LLFIVRVRGPLAVNIPNKAFKILSLLRLVETNTGVFVKLTKNVYPLLKVIAPYVVIGKPS 200

Query: 470 LKSVRELIYKRG 505
           L S+R LI KRG
Sbjct: 201 LSSIRSLIQKRG 212

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>RLP7_CANGA (Q6FS36) Ribosome biogenesis protein RLP7|
          Length = 317

 Score = 62.0 bits (149), Expect = 1e-09
 Identities = 33/74 (44%), Positives = 50/74 (67%), Gaps = 2/74 (2%)
 Frame = +2

Query: 287 EAKLLFVVRIRG-INAMHP-KTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYG 460
           E +LLFV+R++G + A  P K  +IL  LRL ++   VF+K+ + T ++L+ + PYV  G
Sbjct: 133 EEQLLFVLRVKGPVAASIPHKAYRILSTLRLEEVNTAVFIKLTETTFSLLKIIAPYVIVG 192

Query: 461 YPNLKSVRELIYKR 502
            P+LKS+R LI KR
Sbjct: 193 KPSLKSIRSLIQKR 206

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>RLP7_ASHGO (Q75ET5) Ribosome biogenesis protein RLP7|
          Length = 293

 Score = 58.2 bits (139), Expect = 1e-08
 Identities = 32/73 (43%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
 Frame = +2

Query: 290 AKLLFVVRIRGINA--MHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGY 463
           A LLFVVR+RG  A  +  K  ++L LLRL ++  GVF+++      +L+ V PYV  G 
Sbjct: 110 ATLLFVVRVRGPAAAKIPRKAHRVLTLLRLAEVNTGVFVRLTAEVFPLLQVVAPYVVVGR 169

Query: 464 PNLKSVRELIYKR 502
           P+L S+R L+ KR
Sbjct: 170 PSLASIRALVQKR 182

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>RLP7_PICJA (P32101) Ribosome biogenesis protein RLP7 (Fragment)|
          Length = 212

 Score = 53.9 bits (128), Expect = 3e-07
 Identities = 30/76 (39%), Positives = 48/76 (63%), Gaps = 2/76 (2%)
 Frame = +2

Query: 281 SPEAKLLFVVRIRG-INAMHP-KTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVA 454
           S +  L  +VR  G + A  P K +K+LQLLRL +I +GVF+K+ +    +L+ + PY  
Sbjct: 27  SGKPTLYLIVRTPGPVGAKIPSKVQKVLQLLRLNKINSGVFVKLTETVYPLLKLLSPYTV 86

Query: 455 YGYPNLKSVRELIYKR 502
              P+L++VR+L+ KR
Sbjct: 87  IXQPSLQTVRQLVQKR 102

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>RL30_ARCFU (O28375) 50S ribosomal protein L30P|
          Length = 152

 Score = 43.5 bits (101), Expect = 4e-04
 Identities = 25/67 (37%), Positives = 41/67 (61%)
 Frame = +2

Query: 305 VVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVR 484
           VVR+RG   +H K K+ L++LRL + ++ V +    +   ML+ V+ YVAYG  N +++ 
Sbjct: 4   VVRMRGTVDVHRKIKETLKMLRLHKRYHCVVIPDTPSYRGMLQVVKDYVAYGEINAETLA 63

Query: 485 ELIYKRG 505
            L+  RG
Sbjct: 64  LLLRLRG 70

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>RL30_PYRHO (O59440) 50S ribosomal protein L30P|
          Length = 155

 Score = 40.4 bits (93), Expect = 0.003
 Identities = 23/70 (32%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
 Frame = +2

Query: 299 LFVVRIRG-INAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLK 475
           L V+RIRG +N   P  +  L +LRL ++ + V +    + + ML++ + Y+ +G  N +
Sbjct: 4   LAVIRIRGRVNVKRP-VRDTLAMLRLHRVNHCVIVDDTPSYLGMLQKAKDYITWGEINAE 62

Query: 476 SVRELIYKRG 505
           ++ +LI KRG
Sbjct: 63  TLAKLIRKRG 72

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>RL30_PYRFU (Q9HH78) 50S ribosomal protein L30P (PfL30)|
          Length = 155

 Score = 40.4 bits (93), Expect = 0.003
 Identities = 23/70 (32%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
 Frame = +2

Query: 299 LFVVRIRG-INAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLK 475
           L V+RIRG +N   P  +  L +LRL ++ + V +    + + ML++ + Y+ +G  N +
Sbjct: 4   LAVIRIRGRVNVKRP-VRDTLAMLRLHRVNHCVIVDDTPSYLGMLQKAKDYITWGEINAE 62

Query: 476 SVRELIYKRG 505
           ++ +LI KRG
Sbjct: 63  TLAKLIRKRG 72

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>RL30_PYRAB (Q9V1V6) 50S ribosomal protein L30P|
          Length = 155

 Score = 40.4 bits (93), Expect = 0.003
 Identities = 23/70 (32%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
 Frame = +2

Query: 299 LFVVRIRG-INAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLK 475
           L V+RIRG +N   P  +  L +LRL ++ + V +    + + ML++ + Y+ +G  N +
Sbjct: 4   LAVIRIRGRVNVKRP-VRDTLAMLRLHRVNHCVIVDDTPSYLGMLQKAKDYITWGEINAE 62

Query: 476 SVRELIYKRG 505
           ++ +LI KRG
Sbjct: 63  TLAKLIRKRG 72

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>RL30_METVA (P14035) 50S ribosomal protein L30P|
          Length = 154

 Score = 40.0 bits (92), Expect = 0.004
 Identities = 23/74 (31%), Positives = 41/74 (55%)
 Frame = +2

Query: 305 VVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVR 484
           VVR+RG   +       +++LRL ++ + V +  N     M+++V+ YV YG  + +++ 
Sbjct: 5   VVRVRGSVGVRGDIADTMKMLRLHRVNHCVVIPENDHYTGMIKKVKDYVTYGEIDKETLV 64

Query: 485 ELIYKRGYGKLNKQ 526
            LI KRG    NK+
Sbjct: 65  SLILKRGRLAGNKR 78

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>RL30_AERPE (Q9YF96) 50S ribosomal protein L30P|
          Length = 162

 Score = 39.3 bits (90), Expect = 0.007
 Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
 Frame = +2

Query: 296 LLFVVRIRGINAMHPKTKKILQLLRLRQIFNG-VFLKVNKATINMLRRVEPYVAYGYPNL 472
           L  V+RIRG   + P   K L LLRLR+ +   ++        +MLR VE +  YG    
Sbjct: 6   LYAVIRIRGTVDVPPDIDKTLYLLRLRRRYTASIYHDSLPGLRDMLRTVEAWTTYGEIEE 65

Query: 473 KSVRELIYKRG 505
           + + EL+ KRG
Sbjct: 66  RVLEELLRKRG 76

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>RL30_METTH (O26132) 50S ribosomal protein L30P|
          Length = 152

 Score = 38.5 bits (88), Expect = 0.012
 Identities = 18/67 (26%), Positives = 39/67 (58%)
 Frame = +2

Query: 305 VVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVR 484
           VVR+RG   +       +++LRL +I + V ++   + + ML++ + Y+ +G  + +++ 
Sbjct: 4   VVRVRGSAGVRRDIADTMEMLRLNRINHAVLVEDTPSYLGMLQKAKDYITWGEVDQETLT 63

Query: 485 ELIYKRG 505
            +I KRG
Sbjct: 64  AMIRKRG 70

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>RL30_SULSO (Q9UX86) 50S ribosomal protein L30P|
          Length = 158

 Score = 38.1 bits (87), Expect = 0.016
 Identities = 22/70 (31%), Positives = 36/70 (51%)
 Frame = +2

Query: 293 KLLFVVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNL 472
           +LL ++RIRG         + L +LRLR  FN +        + ML +V PY+ +G  + 
Sbjct: 3   ELLGIIRIRGWAKAPWYINETLNMLRLRYNFNTMVYPKTSQILGMLNKVSPYITWGEIDP 62

Query: 473 KSVRELIYKR 502
            +++ LI  R
Sbjct: 63  DTLKLLIINR 72

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>RL30_SULAC (O05642) 50S ribosomal protein L30P|
          Length = 156

 Score = 37.7 bits (86), Expect = 0.021
 Identities = 23/69 (33%), Positives = 36/69 (52%)
 Frame = +2

Query: 293 KLLFVVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNL 472
           +L+ V+RIRG  A     +  L +LRL+  FN +    + +   ML  V  YV +G  N 
Sbjct: 3   ELIGVIRIRGWAATPWYIQDTLSMLRLKNAFNAMIYPKDSSIQGMLNLVSSYVTWGELND 62

Query: 473 KSVRELIYK 499
           + +R L+ K
Sbjct: 63  EGLRLLVSK 71

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>RL30_METJA (P54046) 50S ribosomal protein L30P|
          Length = 154

 Score = 37.7 bits (86), Expect = 0.021
 Identities = 24/77 (31%), Positives = 42/77 (54%)
 Frame = +2

Query: 305 VVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVR 484
           V+RIRG   +       L++LRL ++ + V +   +    ML++V+ YV +G  +  ++ 
Sbjct: 5   VIRIRGRVGVRRDIADTLKMLRLHKVNHCVIIPETETFKGMLQKVKDYVTWGEIDKDTLV 64

Query: 485 ELIYKRGYGKLNKQRIP 535
           +LI KRG    NK+  P
Sbjct: 65  KLILKRGRLPGNKKVNP 81

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>DPOL_NPVLD (P30318) DNA polymerase (EC 2.7.7.7)|
          Length = 1014

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 9/78 (11%)
 Frame = +2

Query: 317 RGINAMHPKTKKILQLLRLRQ-------IFNGVFLKVNKATINMLRRVEPYVAYGYPNL- 472
           + +NA++PK  K L  +R+R         +N  + K+     N L+R+   + YGY  + 
Sbjct: 579 KNVNAVNPKLLKTLSEMRVRYKGLRDQCEYNSFYYKLYDKIQNALKRIANSI-YGYYGIF 637

Query: 473 -KSVRELIYKRGYGKLNK 523
            K +   I K G GKL +
Sbjct: 638 FKPLANYITKMGRGKLKE 655

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>RL30_HALMA (P14121) 50S ribosomal protein L30P (Hmal30) (Hl20) (Hl16)|
          Length = 154

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 15/66 (22%), Positives = 35/66 (53%)
 Frame = +2

Query: 305 VVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVR 484
           +V++RG   MH   +  L++L +  + +   +    A   M+ +V  +VA+G P+ +++ 
Sbjct: 4   LVQLRGEVNMHTDIQDTLEMLNIHHVNHCTLVPETDAYRGMVAKVNDFVAFGEPSQETLE 63

Query: 485 ELIYKR 502
            ++  R
Sbjct: 64  TVLATR 69

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>AX22B_PHAAU (P32294) Auxin-induced protein 22B (Indole-3-acetic acid-induced|
           protein ARG4)
          Length = 196

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 15/47 (31%), Positives = 27/47 (57%)
 Frame = +2

Query: 386 NGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQ 526
           +G+F+KV+      LR+V+  V  GYP L    E ++K   G+ +++
Sbjct: 98  DGIFVKVSMDGAPYLRKVDLKVYGGYPELLKALETMFKLAIGEYSER 144

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>POL_CAMVD (P03556) Enzymatic polyprotein [Contains: Aspartic protease (EC|
           3.4.23.-); Endonuclease; Reverse transcriptase (EC
           2.7.7.49)]
          Length = 674

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 30/104 (28%), Positives = 47/104 (45%), Gaps = 17/104 (16%)
 Frame = +2

Query: 206 EEYDAQDKELVQLK-----REARMKGGFYVSPEA-----KLLFVVRIRGIN------AMH 337
           EE+D Q KEL+ LK     +   M   F V+ EA     K   VV  + +N      A +
Sbjct: 255 EEFDKQIKELLDLKVIKPSKSPHMAPAFLVNNEAEKRRGKKRMVVNYKAMNKATVGDAYN 314

Query: 338 PKTK-KILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYP 466
           P  K ++L L+R ++IF+    K     + + +   P  A+  P
Sbjct: 315 PPNKDELLTLIRGKKIFSSFDCKSGFWQVLLDQESRPLTAFTCP 358

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>AX22D_PHAAU (O24542) Auxin-induced protein 22D (Indole-3-acetic acid-induced|
           protein ARG13)
          Length = 193

 Score = 29.6 bits (65), Expect = 5.7
 Identities = 14/47 (29%), Positives = 28/47 (59%)
 Frame = +2

Query: 386 NGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQ 526
           NG+++KV+ A    LR+++  V   YP L    E ++K  +G+ +++
Sbjct: 96  NGMYVKVSMAGAPYLRKIDLKVYKSYPELLKALENMFKCIFGEYSER 142

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>NUD17_HUMAN (P0C025) Putative nucleoside diphosphate-linked moiety X motif 17,|
           mitochondrial precursor (EC 3.6.1.-) (Nudix motif 17)
          Length = 295

 Score = 29.6 bits (65), Expect = 5.7
 Identities = 24/63 (38%), Positives = 29/63 (46%), Gaps = 7/63 (11%)
 Frame = -3

Query: 505 TSLVDQLPHTLQVRVPICNIWLDPAEHV-------DGGLVNLEEHSIEYLSQTQKLEDLL 347
           T L+ +   TL V     N+W+ P  HV       DGGL  L E S  +L Q Q     L
Sbjct: 105 TVLLTRRARTLSVSP---NLWVPPGGHVELEEELLDGGLRELWEESGLHLPQGQFSWVPL 161

Query: 346 GLW 338
           GLW
Sbjct: 162 GLW 164

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>EEA1_HUMAN (Q15075) Early endosome antigen 1 (Endosome-associated protein|
           p162) (Zinc finger FYVE domain-containing protein 2)
          Length = 1411

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 28/89 (31%), Positives = 40/89 (44%), Gaps = 10/89 (11%)
 Frame = -3

Query: 508 ITSLVDQLPHTLQVRVPICNIWLDPAEHVDGGLVNLEEHSIEYLSQTQKLEDLLG----L 341
           IT+ +DQ+   LQ          D  EH      +L+E+  +YLS  QK E+L G    L
Sbjct: 686 ITTQLDQVTAKLQ----------DKQEHCSQLESHLKEYKEKYLSLEQKTEELEGQIKKL 735

Query: 340 WVHGIDTSDS------DNKQQLSLRTDIE 272
               ++   S      D +QQ  L TD+E
Sbjct: 736 EADSLEVKASKEQALQDLQQQRQLNTDLE 764

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>NU5M_STRPU (P15552) NADH-ubiquinone oxidoreductase chain 5 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 5)
          Length = 637

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 18/43 (41%), Positives = 26/43 (60%)
 Frame = -1

Query: 450 TYGSTLRSMLMVALLTLRNTPLNICLKRKSWRIFLVFGCMALI 322
           T  ++++S+ +   L L NTPLNI L     + FLVF  +ALI
Sbjct: 85  TCNNSIQSINITLSLWLSNTPLNISLNFIYDQYFLVFLSVALI 127

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>GOGA4_HUMAN (Q13439) Golgin subfamily A member 4 (Trans-Golgi p230) (256 kDa|
            golgin) (Golgin-245) (Protein 72.1)
          Length = 2230

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
 Frame = -3

Query: 541  GQRNPLLVELSITSLVDQLPHTLQVRVPICNIWLDPAEHVDGGLVNLEE-HSIEYLSQTQ 365
            G +N +  + ++ ++ D +  TLQ +   C I     + +D  LV  +E H +E    T 
Sbjct: 1820 GGKNNIQAKQNLENVFDDVQKTLQEKELTCQILEQKIKELDSCLVRQKEVHRVEMEELTS 1879

Query: 364  KLEDLLGL 341
            K E L  L
Sbjct: 1880 KYEKLQAL 1887

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>POL_CAMVS (P03554) Enzymatic polyprotein [Contains: Aspartic protease (EC|
           3.4.23.-); Endonuclease; Reverse transcriptase (EC
           2.7.7.49)]
          Length = 679

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 28/104 (26%), Positives = 44/104 (42%), Gaps = 17/104 (16%)
 Frame = +2

Query: 206 EEYDAQDKELVQLK-----REARMKGGFYVSPEA-----KLLFVVRIRGINAMH------ 337
           EE+D Q KEL+ LK     +   M   F V+ EA     K   VV  + +N         
Sbjct: 260 EEFDKQIKELLDLKVIKPSKSPHMAPAFLVNNEAEKRRGKKRMVVNYKAMNKATVGDAYN 319

Query: 338 -PKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYP 466
            P   ++L L+R ++IF+    K     + + +   P  A+  P
Sbjct: 320 LPNKDELLTLIRGKKIFSSFDCKSGFWQVLLDQESRPLTAFTCP 363

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>POL_CAMVE (Q02964) Enzymatic polyprotein [Contains: Aspartic protease (EC|
           3.4.23.-); Endonuclease; Reverse transcriptase (EC
           2.7.7.49)]
          Length = 679

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 28/104 (26%), Positives = 44/104 (42%), Gaps = 17/104 (16%)
 Frame = +2

Query: 206 EEYDAQDKELVQLK-----REARMKGGFYVSPEA-----KLLFVVRIRGINAMH------ 337
           EE+D Q KEL+ LK     +   M   F V+ EA     K   VV  + +N         
Sbjct: 260 EEFDKQIKELLDLKVIKPSKSPHMAPAFLVNNEAEKRRGKKRMVVNYKAMNKATIGDAYN 319

Query: 338 -PKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYP 466
            P   ++L L+R ++IF+    K     + + +   P  A+  P
Sbjct: 320 LPNKDELLTLIRGKKIFSSFDCKSGFWQVLLDQESRPLTAFTCP 363

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>POL_CAMVC (P03555) Enzymatic polyprotein [Contains: Aspartic protease (EC|
           3.4.23.-); Endonuclease; Reverse transcriptase (EC
           2.7.7.49)]
          Length = 679

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 28/104 (26%), Positives = 44/104 (42%), Gaps = 17/104 (16%)
 Frame = +2

Query: 206 EEYDAQDKELVQLK-----REARMKGGFYVSPEA-----KLLFVVRIRGINAMH------ 337
           EE+D Q KEL+ LK     +   M   F V+ EA     K   VV  + +N         
Sbjct: 260 EEFDKQIKELLDLKVIKPSKSPHMAPAFLVNNEAEKRRGKKRMVVNYKAMNKATIGDAYN 319

Query: 338 -PKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYP 466
            P   ++L L+R ++IF+    K     + + +   P  A+  P
Sbjct: 320 LPNKDELLTLIRGKKIFSSFDCKSGFWQVLLDQESRPLTAFTCP 363

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>ZN516_HUMAN (Q92618) Zinc finger protein 516|
          Length = 1163

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 20/53 (37%), Positives = 21/53 (39%), Gaps = 3/53 (5%)
 Frame = +1

Query: 91  KRKREELWAAXXXXXXXXXXXXXXXXPQGHLRPRQAV---RRGVRCTGQGVGS 240
           KRKRE+   A                P GHL PR A    RR    TGQG  S
Sbjct: 463 KRKREQDAPAAQGPPRKRASGPGDPAPAGHLDPRSAARPNRRAAATTGQGKSS 515


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,592,991
Number of Sequences: 219361
Number of extensions: 1008869
Number of successful extensions: 3139
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 3084
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3134
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4315578075
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result