ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags13a05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK072665.1| Oryza sativa (japonica cultivar-group) cDNA clon... 315 1e-82
2gb|AY103760.1| Zea mays PCO110275 mRNA sequence 186 6e-44
3gb|AC109832.2| Oryza sativa (japonica cultivar-group) chromosome... 131 3e-27
4dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 131 3e-27
5gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 131 3e-27
6dbj|AK111001.1| Oryza sativa (japonica cultivar-group) cDNA clon... 123 8e-25
7gb|AF114171.1| Sorghum bicolor BAC clone 25.M18, complete sequence 111 3e-21
8dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 80 1e-11
9gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 80 1e-11
10emb|AL731752.4|CNS08C81 Oryza sativa chromosome 12, . BAC OJ1536... 80 1e-11
11emb|AL731751.4|CNS08C80 Oryza sativa chromosome 12, . BAC OJ1510... 80 1e-11
12ref|NM_202129.1| Arabidopsis thaliana PSP (3-PHOSPHOSERINE PHOSP... 52 0.002
13ref|NM_101722.3| Arabidopsis thaliana PSP (3-PHOSPHOSERINE PHOSP... 52 0.002
14gb|AC026238.2| Arabidopsis thaliana chromosome I BAC F25I16 geno... 52 0.002
15gb|AY096687.1| Arabidopsis thaliana putative 3-phosphoserine pho... 52 0.002
16gb|AY065351.1| Arabidopsis thaliana putative 3-phosphoserine pho... 52 0.002
17gb|AY087385.1| Arabidopsis thaliana clone 34821 mRNA, complete s... 52 0.002
18dbj|AB018409.1| Arabidopsis thaliana gene for 3-phosphoserin pho... 52 0.002
19dbj|AB018408.1| Arabidopsis thaliana mRNA for 3-phosphoserine ph... 52 0.002
20emb|BX813714.1|CNS0ADSN Arabidopsis thaliana Full-length cDNA Co... 50 0.009
21gb|BT024176.1| Zea mays clone EL01N0421E04 mRNA sequence 48 0.037
22gb|AC149136.3| Xenopus tropicalis clone CH216-164F21, complete s... 46 0.15
23gb|AE017349.1| Cryptococcus neoformans var. neoformans JEC21 chr... 42 2.3
24gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxyl... 42 2.3
25ref|XM_572860.1| Cryptococcus neoformans var. neoformans JEC21 t... 42 2.3
26emb|AL161549.2|ATCHRIV49 Arabidopsis thaliana DNA chromosome 4, ... 42 2.3
27emb|AL021711.2|ATF13C5 Arabidopsis thaliana DNA chromosome 4, BA... 42 2.3
28emb|BX470095.12| Zebrafish DNA sequence from clone DKEY-162H1 in... 42 2.3
29emb|BX649249.3| Zebrafish DNA sequence from clone DKEY-30M14 in ... 42 2.3
30emb|BX004786.8| Zebrafish DNA sequence from clone DKEY-1P6 in li... 42 2.3
31gb|AY610235.1| Sus scrofa clone rdbla0108_e3.y1.abd, mRNA sequence 42 2.3
32gb|AC132852.12| Mus musculus chromosome 9, clone RP24-298N7, com... 40 9.1
33gb|AC092129.3| Homo sapiens chromosome 16 clone RP11-140O8, comp... 40 9.1
34gb|AC129607.3| Mus musculus BAC clone RP23-133N3 from 5, complet... 40 9.1
35gb|AC116383.11| Mus musculus chromosome 5, clone RP23-15P21, com... 40 9.1
36gb|AC004972.2| Homo sapiens PAC clone RP5-1136A10 from 7, comple... 40 9.1
37gb|AY135648.1| Branchiostoma floridae Hox gene, complete cds 40 9.1
38emb|AJ551449.1|BFL551449 Branchiostoma floridae partial gene for... 40 9.1
39gb|AY129331.1| Mycobacteriophage CJW1, complete genome 40 9.1
40gb|AC145893.2| Pan troglodytes BAC clone RP43-8C18 from chromoso... 40 9.1
41gb|AE004872.1| Pseudomonas aeruginosa PAO1, section 433 of 529 o... 40 9.1
42gb|AC002304.3|AC002304 Genomic sequence for Arabidopsis thaliana... 40 9.1
43emb|AL831734.10| Mouse DNA sequence from clone RP23-426J13 on ch... 40 9.1 
>dbj|AK072665.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023133N19, full
           insert sequence
          Length = 1283

 Score =  315 bits (159), Expect = 1e-82
 Identities = 303/351 (86%)
 Strand = Plus / Plus

                                                                       
Query: 212 cgccagccatccaaagaggttcttgagacatggcgcaatgccaatgcggtgtgcttcgat 271
           |||||||| ||||||| |||||||||||||||| |||||||| |||| ||||| || |||
Sbjct: 352 cgccagccttccaaaggggttcttgagacatggtgcaatgccgatgcagtgtgttttgat 411

                                                                       
Query: 272 gtggatagcactgtatgcttggatgagggtattgacgagcttgctgacttctgtggggct 331
           || |||||||| || |||||||||||||||||||| || || ||||| ||||||||||||
Sbjct: 412 gttgatagcacggtctgcttggatgagggtattgatgaactcgctgatttctgtggggct 471

                                                                       
Query: 332 gggcaggcagttgccgagtggacgacaaaggcgatgacagggtccgttccatttgaagag 391
           ||| |||| ||||| ||||||||  ||||||| ||||||||  | ||||||||||| |||
Sbjct: 472 gggaaggctgttgctgagtggactgcaaaggcaatgacaggaactgttccatttgaggag 531

                                                                       
Query: 392 gctcttgctgcccggatctctttaatcaagccatctctgtcccaagttgaagactgtttg 451
           || || |||||| || | || ||||| ||||||| ||||||||||||||| |||||||| 
Sbjct: 532 gcactagctgccaggctatcgttaattaagccatatctgtcccaagttgatgactgttta 591

                                                                       
Query: 452 gagaggaggccacccaggatttctcctggaatcgctgatttgattaagacattaaaagct 511
           | || |||||| || ||||||||||||||||| ||||| ||||||||||   | ||||| 
Sbjct: 592 gtgaagaggcctccaaggatttctcctggaattgctgacttgattaagaagctcaaagca 651

                                                              
Query: 512 aataatactgaagtattccttgtgtcaggaggtttccggcaaatgatcaag 562
           ||||||||||| ||||||||||||||||||||||| || ||||||||||||
Sbjct: 652 aataatactgatgtattccttgtgtcaggaggttttcgacaaatgatcaag 702



 Score =  125 bits (63), Expect = 2e-25
 Identities = 75/79 (94%)
 Strand = Plus / Plus

                                                                       
Query: 561 aggctcggcaacctggtggagcagacttgttcatctgttacgctggtgtccagatgagag 620
           |||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 905 aggctcggcagcctggaggagcagacttgttcatctgttacgcaggtgtccagatgagag 964

                              
Query: 621 aagcagttgcagccaaagc 639
           ||||||||||||| |||||
Sbjct: 965 aagcagttgcagcaaaagc 983
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>gb|AY103760.1| Zea mays PCO110275 mRNA sequence
          Length = 2705

 Score =  186 bits (94), Expect = 6e-44
 Identities = 259/314 (82%)
 Strand = Plus / Plus

                                                                       
Query: 248 aatgccaatgcggtgtgcttcgatgtggatagcactgtatgcttggatgagggtattgac 307
           |||||| |||| ||||| ||||| || |||||||| ||   | |||| ||||| ||||||
Sbjct: 313 aatgccgatgcagtgtgtttcgacgttgatagcaccgtcatcctggacgagggcattgac 372

                                                                       
Query: 308 gagcttgctgacttctgtggggctgggcaggcagttgccgagtggacgacaaaggcgatg 367
           ||||||||||| ||||| ||||| ||| | || ||||| || |||||  ||||||| |||
Sbjct: 373 gagcttgctgatttctgcggggcggggaaagctgttgctgaatggactgcaaaggccatg 432

                                                                       
Query: 368 acagggtccgttccatttgaagaggctcttgctgcccggatctctttaatcaagccatct 427
           |||||| | ||||| ||||| ||||| || || ||| || | ||||||||||||||||||
Sbjct: 433 acagggactgttccgtttgaggaggcgctggcagccaggctgtctttaatcaagccatct 492

                                                                       
Query: 428 ctgtcccaagttgaagactgtttggagaggaggccacccaggatttctcctggaatcgct 487
           || ||||| || || || ||  |||||| ||||||||| ||||||||||||||||| |||
Sbjct: 493 ctctcccaggtggaggagtgcctggagaagaggccaccaaggatttctcctggaatggct 552

                                                                       
Query: 488 gatttgattaagacattaaaagctaataatactgaagtattccttgtgtcaggaggtttc 547
           |||||| ||||||   ||||| | ||||||| ||| || ||||||||||||||||| |||
Sbjct: 553 gatttggttaagaagctaaaatccaataatattgatgtgttccttgtgtcaggaggcttc 612

                         
Query: 548 cggcaaatgatcaa 561
           || || ||||||||
Sbjct: 613 cgacacatgatcaa 626



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 77/86 (89%)
 Strand = Plus / Plus

                                                                       
Query: 561 aggctcggcaacctggtggagcagacttgttcatctgttacgctggtgtccagatgagag 620
           |||||||||||||||| |||||||||||||||||||||||||| || || ||||||||||
Sbjct: 830 aggctcggcaacctggcggagcagacttgttcatctgttacgccggggttcagatgagag 889

                                     
Query: 621 aagcagttgcagccaaagctgactgg 646
           |  |||| |||||  |||||||||||
Sbjct: 890 agccagtcgcagcacaagctgactgg 915
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>gb|AC109832.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone P0038B07,
              complete sequence
          Length = 149697

 Score =  131 bits (66), Expect = 3e-27
 Identities = 111/126 (88%)
 Strand = Plus / Minus

                                                                          
Query: 229    ggttcttgagacatggcgcaatgccaatgcggtgtgcttcgatgtggatagcactgtatg 288
              |||||||||||||||| |||||||| |||| ||||| || ||||| |||||||| || ||
Sbjct: 138830 ggttcttgagacatggtgcaatgccgatgcagtgtgttttgatgttgatagcacggtctg 138771

                                                                          
Query: 289    cttggatgagggtattgacgagcttgctgacttctgtggggctgggcaggcagttgccga 348
              |||||||||||||||||| || || ||||| ||||||||||||||| |||| ||||| ||
Sbjct: 138770 cttggatgagggtattgatgaactcgctgatttctgtggggctgggaaggctgttgctga 138711

                    
Query: 349    gtggac 354
              ||||||
Sbjct: 138710 gtggac 138705



 Score =  125 bits (63), Expect = 2e-25
 Identities = 75/79 (94%)
 Strand = Plus / Minus

                                                                          
Query: 561    aggctcggcaacctggtggagcagacttgttcatctgttacgctggtgtccagatgagag 620
              |||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 136616 aggctcggcagcctggaggagcagacttgttcatctgttacgcaggtgtccagatgagag 136557

                                 
Query: 621    aagcagttgcagccaaagc 639
              ||||||||||||| |||||
Sbjct: 136556 aagcagttgcagcaaaagc 136538



 Score =  115 bits (58), Expect = 2e-22
 Identities = 88/98 (89%)
 Strand = Plus / Minus

                                                                          
Query: 466    caggatttctcctggaatcgctgatttgattaagacattaaaagctaataatactgaagt 525
              |||||||||||||||||| ||||| ||||||||||   | ||||| ||||||||||| ||
Sbjct: 138053 caggatttctcctggaattgctgacttgattaagaagctcaaagcaaataatactgatgt 137994

                                                    
Query: 526    attccttgtgtcaggaggtttccggcaaatgatcaagg 563
              ||||||||||||||||||||| || |||||||||||||
Sbjct: 137993 attccttgtgtcaggaggttttcgacaaatgatcaagg 137956



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 64/74 (86%)
 Strand = Plus / Minus

                                                                          
Query: 377    gttccatttgaagaggctcttgctgcccggatctctttaatcaagccatctctgtcccaa 436
              ||||||||||| ||||| || |||||| || | || ||||| ||||||| ||||||||||
Sbjct: 138589 gttccatttgaggaggcactagctgccaggctatcgttaattaagccatatctgtcccaa 138530

                            
Query: 437    gttgaagactgttt 450
              ||||| ||||||||
Sbjct: 138529 gttgatgactgttt 138516
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  131 bits (66), Expect = 3e-27
 Identities = 111/126 (88%)
 Strand = Plus / Minus

                                                                            
Query: 229      ggttcttgagacatggcgcaatgccaatgcggtgtgcttcgatgtggatagcactgtatg 288
                |||||||||||||||| |||||||| |||| ||||| || ||||| |||||||| || ||
Sbjct: 23802792 ggttcttgagacatggtgcaatgccgatgcagtgtgttttgatgttgatagcacggtctg 23802733

                                                                            
Query: 289      cttggatgagggtattgacgagcttgctgacttctgtggggctgggcaggcagttgccga 348
                |||||||||||||||||| || || ||||| ||||||||||||||| |||| ||||| ||
Sbjct: 23802732 cttggatgagggtattgatgaactcgctgatttctgtggggctgggaaggctgttgctga 23802673

                      
Query: 349      gtggac 354
                ||||||
Sbjct: 23802672 gtggac 23802667



 Score =  125 bits (63), Expect = 2e-25
 Identities = 75/79 (94%)
 Strand = Plus / Minus

                                                                            
Query: 561      aggctcggcaacctggtggagcagacttgttcatctgttacgctggtgtccagatgagag 620
                |||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 23800578 aggctcggcagcctggaggagcagacttgttcatctgttacgcaggtgtccagatgagag 23800519

                                   
Query: 621      aagcagttgcagccaaagc 639
                ||||||||||||| |||||
Sbjct: 23800518 aagcagttgcagcaaaagc 23800500



 Score =  115 bits (58), Expect = 2e-22
 Identities = 88/98 (89%)
 Strand = Plus / Minus

                                                                            
Query: 466      caggatttctcctggaatcgctgatttgattaagacattaaaagctaataatactgaagt 525
                |||||||||||||||||| ||||| ||||||||||   | ||||| ||||||||||| ||
Sbjct: 23802015 caggatttctcctggaattgctgacttgattaagaagctcaaagcaaataatactgatgt 23801956

                                                      
Query: 526      attccttgtgtcaggaggtttccggcaaatgatcaagg 563
                ||||||||||||||||||||| || |||||||||||||
Sbjct: 23801955 attccttgtgtcaggaggttttcgacaaatgatcaagg 23801918



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 64/74 (86%)
 Strand = Plus / Minus

                                                                            
Query: 377      gttccatttgaagaggctcttgctgcccggatctctttaatcaagccatctctgtcccaa 436
                ||||||||||| ||||| || |||||| || | || ||||| ||||||| ||||||||||
Sbjct: 23802551 gttccatttgaggaggcactagctgccaggctatcgttaattaagccatatctgtcccaa 23802492

                              
Query: 437      gttgaagactgttt 450
                ||||| ||||||||
Sbjct: 23802491 gttgatgactgttt 23802478
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  131 bits (66), Expect = 3e-27
 Identities = 111/126 (88%)
 Strand = Plus / Minus

                                                                            
Query: 229      ggttcttgagacatggcgcaatgccaatgcggtgtgcttcgatgtggatagcactgtatg 288
                |||||||||||||||| |||||||| |||| ||||| || ||||| |||||||| || ||
Sbjct: 24114461 ggttcttgagacatggtgcaatgccgatgcagtgtgttttgatgttgatagcacggtctg 24114402

                                                                            
Query: 289      cttggatgagggtattgacgagcttgctgacttctgtggggctgggcaggcagttgccga 348
                |||||||||||||||||| || || ||||| ||||||||||||||| |||| ||||| ||
Sbjct: 24114401 cttggatgagggtattgatgaactcgctgatttctgtggggctgggaaggctgttgctga 24114342

                      
Query: 349      gtggac 354
                ||||||
Sbjct: 24114341 gtggac 24114336



 Score =  125 bits (63), Expect = 2e-25
 Identities = 75/79 (94%)
 Strand = Plus / Minus

                                                                            
Query: 561      aggctcggcaacctggtggagcagacttgttcatctgttacgctggtgtccagatgagag 620
                |||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 24112247 aggctcggcagcctggaggagcagacttgttcatctgttacgcaggtgtccagatgagag 24112188

                                   
Query: 621      aagcagttgcagccaaagc 639
                ||||||||||||| |||||
Sbjct: 24112187 aagcagttgcagcaaaagc 24112169



 Score =  115 bits (58), Expect = 2e-22
 Identities = 88/98 (89%)
 Strand = Plus / Minus

                                                                            
Query: 466      caggatttctcctggaatcgctgatttgattaagacattaaaagctaataatactgaagt 525
                |||||||||||||||||| ||||| ||||||||||   | ||||| ||||||||||| ||
Sbjct: 24113684 caggatttctcctggaattgctgacttgattaagaagctcaaagcaaataatactgatgt 24113625

                                                      
Query: 526      attccttgtgtcaggaggtttccggcaaatgatcaagg 563
                ||||||||||||||||||||| || |||||||||||||
Sbjct: 24113624 attccttgtgtcaggaggttttcgacaaatgatcaagg 24113587



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 64/74 (86%)
 Strand = Plus / Minus

                                                                            
Query: 377      gttccatttgaagaggctcttgctgcccggatctctttaatcaagccatctctgtcccaa 436
                ||||||||||| ||||| || |||||| || | || ||||| ||||||| ||||||||||
Sbjct: 24114220 gttccatttgaggaggcactagctgccaggctatcgttaattaagccatatctgtcccaa 24114161

                              
Query: 437      gttgaagactgttt 450
                ||||| ||||||||
Sbjct: 24114160 gttgatgactgttt 24114147
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>dbj|AK111001.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-174-E12, full
           insert sequence
          Length = 1353

 Score =  123 bits (62), Expect = 8e-25
 Identities = 203/250 (81%)
 Strand = Plus / Plus

                                                                       
Query: 240 catggcgcaatgccaatgcggtgtgcttcgatgtggatagcactgtatgcttggatgagg 299
           ||||| |||||||  | ||||||||||||||||| || ||||| || |||||||| ||||
Sbjct: 348 catggtgcaatgctgacgcggtgtgcttcgatgttgacagcacggtctgcttggacgagg 407

                                                                       
Query: 300 gtattgacgagcttgctgacttctgtggggctgggcaggcagttgccgagtggacgacaa 359
           |||| || ||||| || |||||||||||||| || || || ||||| || |||||| | |
Sbjct: 408 gtatcgatgagctcgcggacttctgtggggcaggccaagcggttgctgaatggacggcta 467

                                                                       
Query: 360 aggcgatgacagggtccgttccatttgaagaggctcttgctgcccggatctctttaatca 419
           |||||||||| ||||| ||||| |||||| ||||  | ||||| ||| | || ||  |||
Sbjct: 468 aggcgatgactgggtcagttccgtttgaaaaggcattagctgctcggctatcgttgttca 527

                                                                       
Query: 420 agccatctctgtcccaagttgaagactgtttggagaggaggccacccaggatttctcctg 479
           |||||||| ||   |||||||| |||||  |||||| | ||||||| || || |||||||
Sbjct: 528 agccatctttggggcaagttgaggactgcatggagaagcggccaccaagaatatctcctg 587

                     
Query: 480 gaatcgctga 489
           |||| |||||
Sbjct: 588 gaattgctga 597



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 63/71 (88%)
 Strand = Plus / Plus

                                                                       
Query: 561 aggctcggcaacctggtggagcagacttgttcatctgttacgctggtgtccagatgagag 620
           ||||||||||||||  ||||||||||||||| ||||| || |||||||| |||||||| |
Sbjct: 873 aggctcggcaacctaatggagcagacttgtttatctgctatgctggtgtgcagatgaggg 932

                      
Query: 621 aagcagttgca 631
           |||| ||||||
Sbjct: 933 aagcggttgca 943
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>gb|AF114171.1| Sorghum bicolor BAC clone 25.M18, complete sequence
          Length = 183990

 Score =  111 bits (56), Expect = 3e-21
 Identities = 92/104 (88%)
 Strand = Plus / Minus

                                                                          
Query: 561    aggctcggcaacctggtggagcagacttgttcatctgttacgctggtgtccagatgagag 620
              |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||
Sbjct: 148272 aggctcggcaacctggtggagcggacttgttcatctgttacgctggtgttcagatgagag 148213

                                                          
Query: 621    aagcagttgcagccaaagctgactggaccgtctttgaatttcaa 664
              |  |||| |||||   ||||||||||   |||||||| ||||||
Sbjct: 148212 agccagtcgcagcattagctgactgggtggtctttgattttcaa 148169



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 85/98 (86%)
 Strand = Plus / Minus

                                                                          
Query: 466    caggatttctcctggaatcgctgatttgattaagacattaaaagctaataatactgaagt 525
              |||||||||||||||||| ||||||||  ||||||   ||||| | ||||||| ||| ||
Sbjct: 149453 caggatttctcctggaatggctgatttagttaagaagctaaaatccaataatattgatgt 149394

                                                    
Query: 526    attccttgtgtcaggaggtttccggcaaatgatcaagg 563
               ||||||||||||||||| ||||| |||||||||||||
Sbjct: 149393 gttccttgtgtcaggaggcttccgacaaatgatcaagg 149356



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 83/97 (85%)
 Strand = Plus / Minus

                                                                          
Query: 234    ttgagacatggcgcaatgccaatgcggtgtgcttcgatgtggatagcactgtatgcttgg 293
              ||||||||| ||| |||||  ||||||| || |||||||| |||||||| ||   | |||
Sbjct: 150272 ttgagacattgcggaatgctgatgcggtatgtttcgatgtcgatagcaccgtcatcctgg 150213

                                                   
Query: 294    atgagggtattgacgagcttgctgacttctgtggggc 330
              ||||||| ||||||||||||||||| |||||||||||
Sbjct: 150212 atgagggcattgacgagcttgctgatttctgtggggc 150176



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 84/101 (83%)
 Strand = Plus / Minus

                                                                          
Query: 365    atgacagggtccgttccatttgaagaggctcttgctgcccggatctctttaatcaagcca 424
              ||||||||| | ||||||||||| ||||| || || ||| || | |||||||||||||||
Sbjct: 150061 atgacagggactgttccatttgaggaggcgctggcagccaggctgtctttaatcaagcca 150002

                                                       
Query: 425    tctctgtcccaagttgaagactgtttggagaggaggccacc 465
              ||||| ||||| || || || ||  |||||| |||||||||
Sbjct: 150001 tctctctcccaggtggaggaatgcctggagaagaggccacc 149961
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 97/116 (83%)
 Strand = Plus / Minus

                                                                            
Query: 240      catggcgcaatgccaatgcggtgtgcttcgatgtggatagcactgtatgcttggatgagg 299
                ||||| |||||||  | ||||||||||||||||| || ||||| || |||||||| ||||
Sbjct: 19190938 catggtgcaatgctgacgcggtgtgcttcgatgttgacagcacggtctgcttggacgagg 19190879

                                                                        
Query: 300      gtattgacgagcttgctgacttctgtggggctgggcaggcagttgccgagtggacg 355
                |||| || ||||| || |||||||||||||| || || || ||||| || ||||||
Sbjct: 19190878 gtatcgatgagctcgcggacttctgtggggcaggccaagcggttgctgaatggacg 19190823



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 63/71 (88%)
 Strand = Plus / Minus

                                                                            
Query: 561      aggctcggcaacctggtggagcagacttgttcatctgttacgctggtgtccagatgagag 620
                ||||||||||||||  ||||||||||||||| ||||| || |||||||| |||||||| |
Sbjct: 19188728 aggctcggcaacctaatggagcagacttgtttatctgctatgctggtgtgcagatgaggg 19188669

                           
Query: 621      aagcagttgca 631
                |||| ||||||
Sbjct: 19188668 aagcggttgca 19188658
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 97/116 (83%)
 Strand = Plus / Minus

                                                                            
Query: 240      catggcgcaatgccaatgcggtgtgcttcgatgtggatagcactgtatgcttggatgagg 299
                ||||| |||||||  | ||||||||||||||||| || ||||| || |||||||| ||||
Sbjct: 19117165 catggtgcaatgctgacgcggtgtgcttcgatgttgacagcacggtctgcttggacgagg 19117106

                                                                        
Query: 300      gtattgacgagcttgctgacttctgtggggctgggcaggcagttgccgagtggacg 355
                |||| || ||||| || |||||||||||||| || || || ||||| || ||||||
Sbjct: 19117105 gtatcgatgagctcgcggacttctgtggggcaggccaagcggttgctgaatggacg 19117050



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 63/71 (88%)
 Strand = Plus / Minus

                                                                            
Query: 561      aggctcggcaacctggtggagcagacttgttcatctgttacgctggtgtccagatgagag 620
                ||||||||||||||  ||||||||||||||| ||||| || |||||||| |||||||| |
Sbjct: 19114955 aggctcggcaacctaatggagcagacttgtttatctgctatgctggtgtgcagatgaggg 19114896

                           
Query: 621      aagcagttgca 631
                |||| ||||||
Sbjct: 19114895 aagcggttgca 19114885
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>emb|AL731752.4|CNS08C81 Oryza sativa chromosome 12, . BAC OJ1536_D01 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 127026

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 97/116 (83%)
 Strand = Plus / Plus

                                                                         
Query: 240   catggcgcaatgccaatgcggtgtgcttcgatgtggatagcactgtatgcttggatgagg 299
             ||||| |||||||  | ||||||||||||||||| || ||||| || |||||||| ||||
Sbjct: 35043 catggtgcaatgctgacgcggtgtgcttcgatgttgacagcacggtctgcttggacgagg 35102

                                                                     
Query: 300   gtattgacgagcttgctgacttctgtggggctgggcaggcagttgccgagtggacg 355
             |||| || ||||| || |||||||||||||| || || || ||||| || ||||||
Sbjct: 35103 gtatcgatgagctcgcggacttctgtggggcaggccaagcggttgctgaatggacg 35158



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 63/71 (88%)
 Strand = Plus / Plus

                                                                         
Query: 561   aggctcggcaacctggtggagcagacttgttcatctgttacgctggtgtccagatgagag 620
             ||||||||||||||  ||||||||||||||| ||||| || |||||||| |||||||| |
Sbjct: 37253 aggctcggcaacctaatggagcagacttgtttatctgctatgctggtgtgcagatgaggg 37312

                        
Query: 621   aagcagttgca 631
             |||| ||||||
Sbjct: 37313 aagcggttgca 37323
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>emb|AL731751.4|CNS08C80 Oryza sativa chromosome 12, . BAC OJ1510_A06 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 136155

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 97/116 (83%)
 Strand = Plus / Minus

                                                                         
Query: 240   catggcgcaatgccaatgcggtgtgcttcgatgtggatagcactgtatgcttggatgagg 299
             ||||| |||||||  | ||||||||||||||||| || ||||| || |||||||| ||||
Sbjct: 24268 catggtgcaatgctgacgcggtgtgcttcgatgttgacagcacggtctgcttggacgagg 24209

                                                                     
Query: 300   gtattgacgagcttgctgacttctgtggggctgggcaggcagttgccgagtggacg 355
             |||| || ||||| || |||||||||||||| || || || ||||| || ||||||
Sbjct: 24208 gtatcgatgagctcgcggacttctgtggggcaggccaagcggttgctgaatggacg 24153



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 63/71 (88%)
 Strand = Plus / Minus

                                                                         
Query: 561   aggctcggcaacctggtggagcagacttgttcatctgttacgctggtgtccagatgagag 620
             ||||||||||||||  ||||||||||||||| ||||| || |||||||| |||||||| |
Sbjct: 22058 aggctcggcaacctaatggagcagacttgtttatctgctatgctggtgtgcagatgaggg 21999

                        
Query: 621   aagcagttgca 631
             |||| ||||||
Sbjct: 21998 aagcggttgca 21988
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>ref|NM_202129.1| Arabidopsis thaliana PSP (3-PHOSPHOSERINE PHOSPHATASE) AT1G18640
           (PSP) transcript variant AT1G18640.2 mRNA, complete cds
          Length = 1188

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 80/98 (81%)
 Strand = Plus / Plus

                                                                       
Query: 257 gcggtgtgcttcgatgtggatagcactgtatgcttggatgagggtattgacgagcttgct 316
           ||||| || ||||||||||| ||||| || ||  ||||||| |||||||| || ||||||
Sbjct: 390 gcggtatgtttcgatgtggacagcacggtttgtgtggatgaaggtattgatgaacttgct 449

                                                 
Query: 317 gacttctgtggggctgggcaggcagttgccgagtggac 354
           || || ||||| |||||  |||| ||||| || |||||
Sbjct: 450 gagttttgtggagctggaaaggctgttgctgaatggac 487
to top
>ref|NM_101722.3| Arabidopsis thaliana PSP (3-PHOSPHOSERINE PHOSPHATASE) AT1G18640
           (PSP) transcript variant AT1G18640.1 mRNA, complete cds
          Length = 1140

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 80/98 (81%)
 Strand = Plus / Plus

                                                                       
Query: 257 gcggtgtgcttcgatgtggatagcactgtatgcttggatgagggtattgacgagcttgct 316
           ||||| || ||||||||||| ||||| || ||  ||||||| |||||||| || ||||||
Sbjct: 390 gcggtatgtttcgatgtggacagcacggtttgtgtggatgaaggtattgatgaacttgct 449

                                                 
Query: 317 gacttctgtggggctgggcaggcagttgccgagtggac 354
           || || ||||| |||||  |||| ||||| || |||||
Sbjct: 450 gagttttgtggagctggaaaggctgttgctgaatggac 487
to top
>gb|AC026238.2| Arabidopsis thaliana chromosome I BAC F25I16 genomic sequence,
            complete sequence
          Length = 44879

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 80/98 (81%)
 Strand = Plus / Plus

                                                                        
Query: 257  gcggtgtgcttcgatgtggatagcactgtatgcttggatgagggtattgacgagcttgct 316
            ||||| || ||||||||||| ||||| || ||  ||||||| |||||||| || ||||||
Sbjct: 3498 gcggtatgtttcgatgtggacagcacggtttgtgtggatgaaggtattgatgaacttgct 3557

                                                  
Query: 317  gacttctgtggggctgggcaggcagttgccgagtggac 354
            || || ||||| |||||  |||| ||||| || |||||
Sbjct: 3558 gagttttgtggagctggaaaggctgttgctgaatggac 3595
to top
>gb|AY096687.1| Arabidopsis thaliana putative 3-phosphoserine phosphatase
           (At1g18640) mRNA, complete cds
          Length = 919

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 80/98 (81%)
 Strand = Plus / Plus

                                                                       
Query: 257 gcggtgtgcttcgatgtggatagcactgtatgcttggatgagggtattgacgagcttgct 316
           ||||| || ||||||||||| ||||| || ||  ||||||| |||||||| || ||||||
Sbjct: 253 gcggtatgtttcgatgtggacagcacggtttgtgtggatgaaggtattgatgaacttgct 312

                                                 
Query: 317 gacttctgtggggctgggcaggcagttgccgagtggac 354
           || || ||||| |||||  |||| ||||| || |||||
Sbjct: 313 gagttttgtggagctggaaaggctgttgctgaatggac 350
to top
>gb|AY065351.1| Arabidopsis thaliana putative 3-phosphoserine phosphatase
           (At1g18640) mRNA, complete cds
          Length = 1138

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 80/98 (81%)
 Strand = Plus / Plus

                                                                       
Query: 257 gcggtgtgcttcgatgtggatagcactgtatgcttggatgagggtattgacgagcttgct 316
           ||||| || ||||||||||| ||||| || ||  ||||||| |||||||| || ||||||
Sbjct: 390 gcggtatgtttcgatgtggacagcacggtttgtgtggatgaaggtattgatgaacttgct 449

                                                 
Query: 317 gacttctgtggggctgggcaggcagttgccgagtggac 354
           || || ||||| |||||  |||| ||||| || |||||
Sbjct: 450 gagttttgtggagctggaaaggctgttgctgaatggac 487
to top
>gb|AY087385.1| Arabidopsis thaliana clone 34821 mRNA, complete sequence
          Length = 1079

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 80/98 (81%)
 Strand = Plus / Plus

                                                                       
Query: 257 gcggtgtgcttcgatgtggatagcactgtatgcttggatgagggtattgacgagcttgct 316
           ||||| || ||||||||||| ||||| || ||  ||||||| |||||||| || ||||||
Sbjct: 351 gcggtatgtttcgatgtggacagcacggtttgtgtggatgaaggtattgatgaacttgct 410

                                                 
Query: 317 gacttctgtggggctgggcaggcagttgccgagtggac 354
           || || ||||| |||||  |||| ||||| || |||||
Sbjct: 411 gagttttgtggagctggaaaggctgttgctgaatggac 448
to top
>dbj|AB018409.1| Arabidopsis thaliana gene for 3-phosphoserin phosphatase, complete
           cds
          Length = 1734

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 80/98 (81%)
 Strand = Plus / Plus

                                                                       
Query: 257 gcggtgtgcttcgatgtggatagcactgtatgcttggatgagggtattgacgagcttgct 316
           ||||| || ||||||||||| ||||| || ||  ||||||| |||||||| || ||||||
Sbjct: 441 gcggtatgtttcgatgtggacagcacggtttgtgtggatgaaggtattgatgaacttgct 500

                                                 
Query: 317 gacttctgtggggctgggcaggcagttgccgagtggac 354
           || || ||||| |||||  |||| ||||| || |||||
Sbjct: 501 gagttttgtggagctggaaaggctgttgctgaatggac 538
to top
>dbj|AB018408.1| Arabidopsis thaliana mRNA for 3-phosphoserine phosphatase, complete
           cds
          Length = 1100

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 80/98 (81%)
 Strand = Plus / Plus

                                                                       
Query: 257 gcggtgtgcttcgatgtggatagcactgtatgcttggatgagggtattgacgagcttgct 316
           ||||| || ||||||||||| ||||| || ||  ||||||| |||||||| || ||||||
Sbjct: 336 gcggtatgtttcgatgtggacagcacggtttgtgtggatgaaggtattgatgaacttgct 395

                                                 
Query: 317 gacttctgtggggctgggcaggcagttgccgagtggac 354
           || || ||||| |||||  |||| ||||| || |||||
Sbjct: 396 gagttttgtggagctggaaaggctgttgctgaatggac 433
to top
>emb|BX813714.1|CNS0ADSN Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB35ZG12 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 767

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                
Query: 570 aacctggtggagcagacttgttcatctgttacgctgg 606
           |||||||||||||||| |||||||| || ||||||||
Sbjct: 481 aacctggtggagcagatttgttcatatgctacgctgg 517
to top
>gb|BT024176.1| Zea mays clone EL01N0421E04 mRNA sequence
          Length = 2068

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                    
Query: 410  tctttaatcaagccatctctgtcccaagttgaagactgtttggagaggaggccacc 465
            |||||||||||||||||||| ||||| || ||||| ||   ||||| |||||||||
Sbjct: 1035 tctttaatcaagccatctctctcccaggtggaagagtgcccggagaagaggccacc 1090
to top
>gb|AC149136.3| Xenopus tropicalis clone CH216-164F21, complete sequence
          Length = 182684

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 458    aggccacccaggatttctcctgg 480
              |||||||||||||||||||||||
Sbjct: 171581 aggccacccaggatttctcctgg 171559
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>gb|AE017349.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 9, complete
              sequence
          Length = 1178688

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 260    gtgtgcttcgatgtggatagc 280
              |||||||||||||||||||||
Sbjct: 402144 gtgtgcttcgatgtggatagc 402164
to top
>gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxylase, ZCCT2, ZCCT1, and
              SNF2P genes, complete cds; nucellin pseudogene, complete
              sequence; putative transposase, phosphatidylinositol
              phosphatidylcholine transfer protein sec14 cytosolic-like
              protein, and phytochrome P450-like protein genes, complete
              cds; and unknown genes
          Length = 438828

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 158    gtggcagcagcaatggaggtctcca 182
              ||||||||||||||| |||||||||
Sbjct: 244550 gtggcagcagcaatgaaggtctcca 244574
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>ref|XM_572860.1| Cryptococcus neoformans var. neoformans JEC21 transporter
           (CNI01350) partial mRNA
          Length = 2130

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 260 gtgtgcttcgatgtggatagc 280
           |||||||||||||||||||||
Sbjct: 304 gtgtgcttcgatgtggatagc 324
to top
>emb|AL161549.2|ATCHRIV49 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 49
          Length = 199075

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 498    agacattaaaagctaataata 518
              |||||||||||||||||||||
Sbjct: 176285 agacattaaaagctaataata 176305
to top
>emb|AL021711.2|ATF13C5 Arabidopsis thaliana DNA chromosome 4, BAC clone F13C5 (ESSA project)
          Length = 119111

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 498   agacattaaaagctaataata 518
             |||||||||||||||||||||
Sbjct: 62915 agacattaaaagctaataata 62935
to top
>emb|BX470095.12| Zebrafish DNA sequence from clone DKEY-162H1 in linkage group 24,
              complete sequence
          Length = 209513

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 498    agacattaaaagctaataata 518
              |||||||||||||||||||||
Sbjct: 107096 agacattaaaagctaataata 107076
to top
>emb|BX649249.3| Zebrafish DNA sequence from clone DKEY-30M14 in linkage group 24,
             complete sequence
          Length = 47695

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 498   agacattaaaagctaataata 518
             |||||||||||||||||||||
Sbjct: 46073 agacattaaaagctaataata 46093
to top
>emb|BX004786.8| Zebrafish DNA sequence from clone DKEY-1P6 in linkage group 24,
             complete sequence
          Length = 178232

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 498   agacattaaaagctaataata 518
             |||||||||||||||||||||
Sbjct: 64131 agacattaaaagctaataata 64111
to top
>gb|AY610235.1| Sus scrofa clone rdbla0108_e3.y1.abd, mRNA sequence
          Length = 617

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 1   attcggcacgagggatcagtg 21
           |||||||||||||||||||||
Sbjct: 594 attcggcacgagggatcagtg 614
to top
>gb|AC132852.12| Mus musculus chromosome 9, clone RP24-298N7, complete sequence
          Length = 183786

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 510    ctaataatactgaagtattc 529
              ||||||||||||||||||||
Sbjct: 120003 ctaataatactgaagtattc 120022
to top
>gb|AC092129.3| Homo sapiens chromosome 16 clone RP11-140O8, complete sequence
          Length = 190333

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 455    aggaggccacccaggatttc 474
              ||||||||||||||||||||
Sbjct: 118556 aggaggccacccaggatttc 118575
to top
>gb|AC129607.3| Mus musculus BAC clone RP23-133N3 from 5, complete sequence
          Length = 186120

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 451   ggagaggaggccacccagga 470
             ||||||||||||||||||||
Sbjct: 81932 ggagaggaggccacccagga 81951
to top
>gb|AC116383.11| Mus musculus chromosome 5, clone RP23-15P21, complete sequence
          Length = 259299

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 497    aagacattaaaagctaataa 516
              ||||||||||||||||||||
Sbjct: 186279 aagacattaaaagctaataa 186298
to top
>gb|AC004972.2| Homo sapiens PAC clone RP5-1136A10 from 7, complete sequence
          Length = 140256

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 288   gcttggatgagggtattgac 307
             ||||||||||||||||||||
Sbjct: 51619 gcttggatgagggtattgac 51600
to top
>gb|AY135648.1| Branchiostoma floridae Hox gene, complete cds
          Length = 38796

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 577   tggagcagacttgttcatct 596
             ||||||||||||||||||||
Sbjct: 19936 tggagcagacttgttcatct 19917
to top
>emb|AJ551449.1|BFL551449 Branchiostoma floridae partial gene for homeobox protein AmphiTlx,
            exons 1-3
          Length = 10535

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 577  tggagcagacttgttcatct 596
            ||||||||||||||||||||
Sbjct: 1849 tggagcagacttgttcatct 1868
to top
>gb|AY129331.1| Mycobacteriophage CJW1, complete genome
          Length = 75931

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 565   tcggcaacctggtggagcag 584
             ||||||||||||||||||||
Sbjct: 32238 tcggcaacctggtggagcag 32257
to top
>gb|AC145893.2| Pan troglodytes BAC clone RP43-8C18 from chromosome 7, complete
             sequence
          Length = 161780

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 288   gcttggatgagggtattgac 307
             ||||||||||||||||||||
Sbjct: 59292 gcttggatgagggtattgac 59311
to top
>gb|AE004872.1| Pseudomonas aeruginosa PAO1, section 433 of 529 of the complete
            genome
          Length = 10256

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 554  atgatcaaggctcggcaacc 573
            ||||||||||||||||||||
Sbjct: 9984 atgatcaaggctcggcaacc 9965
to top
>gb|AC002304.3|AC002304 Genomic sequence for Arabidopsis thaliana BAC F14J16 from chromosome I,
             complete sequence
          Length = 106320

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 486   ctgatttgattaagacattaaaag 509
             ||||||| ||||||||||||||||
Sbjct: 64460 ctgattttattaagacattaaaag 64483
to top
>emb|AL831734.10| Mouse DNA sequence from clone RP23-426J13 on chromosome X, complete
              sequence
          Length = 208106

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 502    attaaaagctaataatactg 521
              ||||||||||||||||||||
Sbjct: 145264 attaaaagctaataatactg 145245


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,339,107
Number of Sequences: 3902068
Number of extensions: 5339107
Number of successful extensions: 97985
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 97766
Number of HSP's gapped (non-prelim): 218
length of query: 664
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 641
effective length of database: 17,143,297,704
effective search space: 10988853828264
effective search space used: 10988853828264
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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