| Clone Name | bags12j17 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AL606657.4|OSJN00101 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0034I13, complete sequence Length = 123480 Score = 95.6 bits (48), Expect = 1e-16 Identities = 87/100 (87%) Strand = Plus / Minus Query: 190 gatggagtagaagaggaggatgacgaccaggacaatgacgatgatgaggaggatgacgac 249 ||||||||||| ||||| || || || ||||||||||| ||||||||||| ||||| || Sbjct: 35055 gatggagtagatgaggaagaggaagatcaggacaatgaggatgatgaggaagatgatgat 34996 Query: 250 gaggactcgctccagcccccgaagaagaggaagaagtgaa 289 || ||||| || |||||||| ||||||||||||||||||| Sbjct: 34995 gaagactcacttcagcccccaaagaagaggaagaagtgaa 34956 Score = 69.9 bits (35), Expect = 8e-09 Identities = 76/88 (86%), Gaps = 5/88 (5%) Strand = Plus / Minus Query: 434 gaactttgttgtcatcgttactttgcttctgtggagttgatcgaacagatgtttcgctaa 493 ||||| ||||||||| ||| ||| |||||||||||||||| |||||||||||||||| Sbjct: 34791 gaactctgttgtcattgttgctt-gcttctgtggagttga----acagatgtttcgctaa 34737 Query: 494 cataattgtacctgagtggcgaaagcct 521 ||||||| |||||| ||| |||||||| Sbjct: 34736 cataattcgacctgaatggtgaaagcct 34709
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 95.6 bits (48), Expect = 1e-16 Identities = 87/100 (87%) Strand = Plus / Minus Query: 190 gatggagtagaagaggaggatgacgaccaggacaatgacgatgatgaggaggatgacgac 249 ||||||||||| ||||| || || || ||||||||||| ||||||||||| ||||| || Sbjct: 32418254 gatggagtagatgaggaagaggaagatcaggacaatgaggatgatgaggaagatgatgat 32418195 Query: 250 gaggactcgctccagcccccgaagaagaggaagaagtgaa 289 || ||||| || |||||||| ||||||||||||||||||| Sbjct: 32418194 gaagactcacttcagcccccaaagaagaggaagaagtgaa 32418155 Score = 69.9 bits (35), Expect = 8e-09 Identities = 76/88 (86%), Gaps = 5/88 (5%) Strand = Plus / Minus Query: 434 gaactttgttgtcatcgttactttgcttctgtggagttgatcgaacagatgtttcgctaa 493 ||||| ||||||||| ||| ||| |||||||||||||||| |||||||||||||||| Sbjct: 32417990 gaactctgttgtcattgttgctt-gcttctgtggagttga----acagatgtttcgctaa 32417936 Query: 494 cataattgtacctgagtggcgaaagcct 521 ||||||| |||||| ||| |||||||| Sbjct: 32417935 cataattcgacctgaatggtgaaagcct 32417908 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 224 atgacgatgatgaggaggatgacgacgagga 254 |||| |||||||| ||||||||||||||||| Sbjct: 25641152 atgaggatgatgacgaggatgacgacgagga 25641122 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 41 taggtgagggtgaggagaatggcgagga 68 ||||| ||||||||||||||||| |||| Sbjct: 1667654 taggtaagggtgaggagaatggctagga 1667681
>dbj|AK104813.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-G08, full insert sequence Length = 914 Score = 95.6 bits (48), Expect = 1e-16 Identities = 87/100 (87%) Strand = Plus / Plus Query: 190 gatggagtagaagaggaggatgacgaccaggacaatgacgatgatgaggaggatgacgac 249 ||||||||||| ||||| || || || ||||||||||| ||||||||||| ||||| || Sbjct: 595 gatggagtagatgaggaagaggaagatcaggacaatgaggatgatgaggaagatgatgat 654 Query: 250 gaggactcgctccagcccccgaagaagaggaagaagtgaa 289 || ||||| || |||||||| ||||||||||||||||||| Sbjct: 655 gaagactcacttcagcccccaaagaagaggaagaagtgaa 694 Score = 48.1 bits (24), Expect = 0.030 Identities = 53/61 (86%), Gaps = 5/61 (8%) Strand = Plus / Plus Query: 434 gaactttgttgtcatcgttactttgcttctgtggagttgatcgaacagatgtttcgctaa 493 ||||| ||||||||| ||| ||| |||||||||||||||| |||||||||||||||| Sbjct: 859 gaactctgttgtcattgttgctt-gcttctgtggagttga----acagatgtttcgctaa 913 Query: 494 c 494 | Sbjct: 914 c 914
>dbj|AK064789.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000C05, full insert sequence Length = 929 Score = 95.6 bits (48), Expect = 1e-16 Identities = 87/100 (87%) Strand = Plus / Plus Query: 190 gatggagtagaagaggaggatgacgaccaggacaatgacgatgatgaggaggatgacgac 249 ||||||||||| ||||| || || || ||||||||||| ||||||||||| ||||| || Sbjct: 575 gatggagtagatgaggaagaggaagatcaggacaatgaggatgatgaggaagatgatgat 634 Query: 250 gaggactcgctccagcccccgaagaagaggaagaagtgaa 289 || ||||| || |||||||| ||||||||||||||||||| Sbjct: 635 gaagactcacttcagcccccaaagaagaggaagaagtgaa 674 Score = 61.9 bits (31), Expect = 2e-06 Identities = 75/88 (85%), Gaps = 5/88 (5%) Strand = Plus / Plus Query: 434 gaactttgttgtcatcgttactttgcttctgtggagttgatcgaacagatgtttcgctaa 493 ||||| ||||||||| ||| ||| |||||||||||||||| ||||||||||||||| Sbjct: 839 gaactctgttgtcattgttgctt-gcttctgtggagttga----acagatgtttcgctag 893 Query: 494 cataattgtacctgagtggcgaaagcct 521 ||||||| |||||| ||| |||||||| Sbjct: 894 cataattcgacctgaatggtgaaagcct 921
>ref|XM_474041.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 612 Score = 93.7 bits (47), Expect = 6e-16 Identities = 86/99 (86%) Strand = Plus / Plus Query: 190 gatggagtagaagaggaggatgacgaccaggacaatgacgatgatgaggaggatgacgac 249 ||||||||||| ||||| || || || ||||||||||| ||||||||||| ||||| || Sbjct: 514 gatggagtagatgaggaagaggaagatcaggacaatgaggatgatgaggaagatgatgat 573 Query: 250 gaggactcgctccagcccccgaagaagaggaagaagtga 288 || ||||| || |||||||| |||||||||||||||||| Sbjct: 574 gaagactcacttcagcccccaaagaagaggaagaagtga 612
>gb|AY103839.1| Zea mays PCO064202 mRNA sequence Length = 1015 Score = 75.8 bits (38), Expect = 1e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 229 gatgatgaggaggatgacgacgaggactcgctccagcccccgaagaagaggaagaagtga 288 ||||| ||||| ||||| || || ||||||||||||||||| |||||||||||||||||| Sbjct: 685 gatgaggaggaagatgatgatgaagactcgctccagcccccaaagaagaggaagaagtga 744 Query: 289 ag 290 || Sbjct: 745 ag 746 Score = 60.0 bits (30), Expect = 8e-06 Identities = 58/67 (86%), Gaps = 4/67 (5%) Strand = Plus / Plus Query: 456 ttgcttctgtggagttgatcgaacagatgtttcgctaacataattgtacctgagtggcga 515 ||||||||||||||| |||||||||||||||||||||||||| || |||||| || Sbjct: 922 ttgcttctgtggagt----cgaacagatgtttcgctaacataattcgacttgagtgatga 977 Query: 516 aagcctc 522 ||||||| Sbjct: 978 aagcctc 984
>gb|BT019296.1| Zea mays clone Contig969.F mRNA sequence Length = 952 Score = 73.8 bits (37), Expect = 5e-10 Identities = 55/61 (90%) Strand = Plus / Minus Query: 229 gatgatgaggaggatgacgacgaggactcgctccagcccccgaagaagaggaagaagtga 288 ||||| ||||| ||||| || || ||||||||||||||||| |||||||||||||||||| Sbjct: 356 gatgaggaggaagatgatgatgaagactcgctccagcccccaaagaagaggaagaagtga 297 Query: 289 a 289 | Sbjct: 296 a 296 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 474 tcgaacagatgtttcgctaacataattgtacctgagtggcgaaagcctc 522 ||||||||||||||||||||||||||| || |||||| |||||||||| Sbjct: 105 tcgaacagatgtttcgctaacataattcgacttgagtgacgaaagcctc 57
>ref|XM_516204.1| PREDICTED: Pan troglodytes similar to hypothetical protein MGC61716 (LOC460076), mRNA Length = 716 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 218 aggacaatgacgatgatgaggaggatgacgacgagga 254 |||||||||||||||||||||| |||||||| ||||| Sbjct: 670 aggacaatgacgatgatgaggatgatgacgaggagga 706
>ref|NM_143226.1| Drosophila melanogaster CG5467-RA (CG5467), mRNA Length = 2970 Score = 58.0 bits (29), Expect = 3e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 226 gacgatgatgaggaggatgacgacgagga 254 ||||||||||||||||||||||||||||| Sbjct: 1627 gacgatgatgaggaggatgacgacgagga 1655
>gb|AY060642.1| Drosophila melanogaster GH07007 full length cDNA Length = 1536 Score = 58.0 bits (29), Expect = 3e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 226 gacgatgatgaggaggatgacgacgagga 254 ||||||||||||||||||||||||||||| Sbjct: 186 gacgatgatgaggaggatgacgacgagga 214
>gb|AC008214.4|AC008214 Drosophila melanogaster, chromosome 3R, region 97B-97C, BAC clone BACR13P17, complete sequence Length = 170403 Score = 58.0 bits (29), Expect = 3e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 226 gacgatgatgaggaggatgacgacgagga 254 ||||||||||||||||||||||||||||| Sbjct: 83884 gacgatgatgaggaggatgacgacgagga 83912
>gb|AE003757.2| Drosophila melanogaster chromosome 3R, section 95 of 118 of the complete sequence Length = 191834 Score = 58.0 bits (29), Expect = 3e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 226 gacgatgatgaggaggatgacgacgagga 254 ||||||||||||||||||||||||||||| Sbjct: 5869 gacgatgatgaggaggatgacgacgagga 5897
>gb|AC174651.2| Mus musculus BAC clone CH25-241D1 from chromosome 6, complete sequence Length = 120448 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 202 gaggaggatgacgaccaggacaatgacgatgatgaggaggatgacgacgagga 254 |||||||||||||| ||||| ||||||| || |||||||||||||| ||||| Sbjct: 16060 gaggaggatgacgagcaggaggatgacgaggaggaggaggatgacgaggagga 16112 Score = 42.1 bits (21), Expect = 1.9 Identities = 45/53 (84%) Strand = Plus / Plus Query: 202 gaggaggatgacgaccaggacaatgacgatgatgaggaggatgacgacgagga 254 |||||||| ||||| |||| ||||||| || |||||||| ||||||||||| Sbjct: 16006 gaggaggacgacgaggaggaggatgacgaggaggaggaggaggacgacgagga 16058
>gb|AC153381.2| Mus musculus 6 BAC RP23-397L23 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 196902 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 202 gaggaggatgacgaccaggacaatgacgatgatgaggaggatgacgacgagga 254 |||||||||||||| ||||| ||||||| || |||||||||||||| ||||| Sbjct: 187192 gaggaggatgacgagcaggaggatgacgaggaggaggaggatgacgaggagga 187140 Score = 42.1 bits (21), Expect = 1.9 Identities = 45/53 (84%) Strand = Plus / Minus Query: 202 gaggaggatgacgaccaggacaatgacgatgatgaggaggatgacgacgagga 254 |||||||| ||||| |||| ||||||| || |||||||| ||||||||||| Sbjct: 187246 gaggaggacgacgaggaggaggatgacgaggaggaggaggaggacgacgagga 187194
>gb|AC006644.1| Caenorhabditis elegans cosmid F55A3, complete sequence Length = 30973 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 224 atgacgatgatgaggaggatgacgacgagga 254 |||| |||||||||||||||||||||||||| Sbjct: 26338 atgaagatgatgaggaggatgacgacgagga 26368
>ref|NM_060422.3| Caenorhabditis elegans F55A3.1 (F55A3.1) mRNA, complete cds Length = 3610 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 224 atgacgatgatgaggaggatgacgacgagga 254 |||| |||||||||||||||||||||||||| Sbjct: 754 atgaagatgatgaggaggatgacgacgagga 784
>ref|XM_711526.1| Candida albicans SC5314 hypothetical protein (CaO19_7378), mRNA Length = 1617 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 226 gacgatgatgaggaggatgacgacga 251 |||||||||||||||||||||||||| Sbjct: 1534 gacgatgatgaggaggatgacgacga 1559
>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003 Length = 4170692 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 226 gacgatgatgaggaggatgacgacgagga 254 |||||||||||||||||||| |||||||| Sbjct: 2282681 gacgatgatgaggaggatgatgacgagga 2282653
>gb|AC136226.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0067H15, complete sequence Length = 184316 Score = 48.1 bits (24), Expect = 0.030 Identities = 24/24 (100%) Strand = Plus / Minus Query: 222 caatgacgatgatgaggaggatga 245 |||||||||||||||||||||||| Sbjct: 67475 caatgacgatgatgaggaggatga 67452 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 gaagaagaggaagaagtgaa 289 |||||||||||||||||||| Sbjct: 155301 gaagaagaggaagaagtgaa 155282
>ref|NM_203552.1| Xenopus tropicalis nucleophosmin (nucleolar phosphoprotein B23, numatrin) (npm1), mRNA Length = 1012 Score = 48.1 bits (24), Expect = 0.030 Identities = 27/28 (96%) Strand = Plus / Plus Query: 224 atgacgatgatgaggaggatgacgacga 251 ||||||||||||||||||| |||||||| Sbjct: 576 atgacgatgatgaggaggaggacgacga 603
>gb|BC059736.1| Xenopus tropicalis nucleophosmin (nucleolar phosphoprotein B23, numatrin), mRNA (cDNA clone MGC:75688 IMAGE:5380244), complete cds Length = 1012 Score = 48.1 bits (24), Expect = 0.030 Identities = 27/28 (96%) Strand = Plus / Plus Query: 224 atgacgatgatgaggaggatgacgacga 251 ||||||||||||||||||| |||||||| Sbjct: 576 atgacgatgatgaggaggaggacgacga 603
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 48.1 bits (24), Expect = 0.030 Identities = 24/24 (100%) Strand = Plus / Minus Query: 222 caatgacgatgatgaggaggatga 245 |||||||||||||||||||||||| Sbjct: 6942552 caatgacgatgatgaggaggatga 6942529 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 235 gaggaggatgacgacgaggac 255 ||||||||||||||||||||| Sbjct: 17520399 gaggaggatgacgacgaggac 17520379 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 gaagaagaggaagaagtgaa 289 |||||||||||||||||||| Sbjct: 7030378 gaagaagaggaagaagtgaa 7030359
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 48.1 bits (24), Expect = 0.030 Identities = 27/28 (96%) Strand = Plus / Plus Query: 224 atgacgatgatgaggaggatgacgacga 251 ||||||| |||||||||||||||||||| Sbjct: 7985288 atgacgaagatgaggaggatgacgacga 7985315 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 235 gaggaggatgacgacgaggact 256 |||||||||||||||||||||| Sbjct: 32603249 gaggaggatgacgacgaggact 32603270 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 229 gatgatgaggaggatgacgacgaggactc 257 |||||||||||||||||||| || ||||| Sbjct: 29634197 gatgatgaggaggatgacgatgacgactc 29634169
>dbj|AP005613.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0082C09 Length = 160665 Score = 48.1 bits (24), Expect = 0.030 Identities = 27/28 (96%) Strand = Plus / Plus Query: 224 atgacgatgatgaggaggatgacgacga 251 ||||||| |||||||||||||||||||| Sbjct: 108703 atgacgaagatgaggaggatgacgacga 108730
>gb|AC149875.2| Xenopus tropicalis clone CH216-151P11, complete sequence Length = 155394 Score = 48.1 bits (24), Expect = 0.030 Identities = 27/28 (96%) Strand = Plus / Minus Query: 224 atgacgatgatgaggaggatgacgacga 251 ||||||||||||||||||| |||||||| Sbjct: 107729 atgacgatgatgaggaggaggacgacga 107702
>emb|CR761659.1| Xenopus tropicalis finished cDNA, clone TGas070n12 Length = 1051 Score = 48.1 bits (24), Expect = 0.030 Identities = 27/28 (96%) Strand = Plus / Plus Query: 224 atgacgatgatgaggaggatgacgacga 251 ||||||||||||||||||| |||||||| Sbjct: 539 atgacgatgatgaggaggaggacgacga 566
>ref|NM_022621.1| Rattus norvegicus nucleolin-related protein (Norp), mRNA Length = 2148 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 232 gatgaggaggatgacgacgagga 254 ||||||||||||||||||||||| Sbjct: 739 gatgaggaggatgacgacgagga 761
>ref|XM_878934.1| PREDICTED: Bos taurus upstream binding transcription factor, RNA polymerase I, transcript variant 4 (UBTF), mRNA Length = 3212 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 205 gaggatgacgaccaggacaatgacgatgatgagga 239 |||||||||||| ||||| ||||||| |||||||| Sbjct: 2479 gaggatgacgacgaggacgatgacgaggatgagga 2513
>ref|XM_601299.2| PREDICTED: Bos taurus upstream binding transcription factor, RNA polymerase I, transcript variant 1 (UBTF), mRNA Length = 2895 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 205 gaggatgacgaccaggacaatgacgatgatgagga 239 |||||||||||| ||||| ||||||| |||||||| Sbjct: 2162 gaggatgacgacgaggacgatgacgaggatgagga 2196
>ref|XM_866652.1| PREDICTED: Bos taurus upstream binding transcription factor, RNA polymerase I, transcript variant 2 (UBTF), mRNA Length = 3218 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 205 gaggatgacgaccaggacaatgacgatgatgagga 239 |||||||||||| ||||| ||||||| |||||||| Sbjct: 2485 gaggatgacgacgaggacgatgacgaggatgagga 2519
>ref|NM_011551.4| Mus musculus upstream binding transcription factor, RNA polymerase I (Ubtf), mRNA Length = 3031 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 224 atgacgatgatgaggaggatgacgacgagga 254 |||||||||| |||||||| ||||||||||| Sbjct: 2089 atgacgatgaggaggaggaggacgacgagga 2119
>gb|AC025724.3| Caenorhabditis elegans cosmid Y67D8C, complete sequence Length = 103670 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 226 gacgatgatgaggaggatgacga 248 ||||||||||||||||||||||| Sbjct: 8002 gacgatgatgaggaggatgacga 7980
>ref|XM_856550.1| PREDICTED: Canis familiaris similar to nucleolin-related protein, transcript variant 5 (LOC608445), mRNA Length = 3018 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 232 gatgaggaggatgacgacgagga 254 ||||||||||||||||||||||| Sbjct: 1261 gatgaggaggatgacgacgagga 1283
>ref|XM_856520.1| PREDICTED: Canis familiaris similar to nucleolin-related protein, transcript variant 4 (LOC608445), mRNA Length = 3006 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 232 gatgaggaggatgacgacgagga 254 ||||||||||||||||||||||| Sbjct: 1261 gatgaggaggatgacgacgagga 1283
>ref|XM_856489.1| PREDICTED: Canis familiaris similar to nucleolin-related protein, transcript variant 3 (LOC608445), mRNA Length = 2868 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 232 gatgaggaggatgacgacgagga 254 ||||||||||||||||||||||| Sbjct: 1261 gatgaggaggatgacgacgagga 1283
>ref|XM_856460.1| PREDICTED: Canis familiaris similar to nucleolin-related protein, transcript variant 2 (LOC608445), mRNA Length = 2831 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 232 gatgaggaggatgacgacgagga 254 ||||||||||||||||||||||| Sbjct: 1261 gatgaggaggatgacgacgagga 1283
>ref|XM_845384.1| PREDICTED: Canis familiaris similar to nucleolin-related protein, transcript variant 1 (LOC608445), mRNA Length = 3075 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 232 gatgaggaggatgacgacgagga 254 ||||||||||||||||||||||| Sbjct: 1261 gatgaggaggatgacgacgagga 1283
>emb|AJ296686.1|PAB296686 Picea abies ATC microsatellite DNA, clone EATC1A02 Length = 421 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 208 gatgacgaccaggacaatgacgatgatgaggagga 242 ||||||||| | ||| ||||||||||||||||||| Sbjct: 279 gatgacgacgatgacgatgacgatgatgaggagga 245 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 220 gacaatgacgatgatgaggaggatgacga 248 ||||||||||| ||||| ||||||||||| Sbjct: 219 gacaatgacgacgatgacgaggatgacga 191
>ref|XM_737137.1| Plasmodium chabaudi chabaudi hypothetical protein (PC000721.04.0) partial mRNA Length = 309 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 220 gacaatgacgatgatgaggaggatgacgacgagga 254 ||||||||||||||||| || ||||||||||||| Sbjct: 262 gacaatgacgatgatgatgaatatgacgacgagga 296
>gb|AC161062.2| Pan troglodytes BAC clone CH251-4H1 from chromosome unknown, complete sequence Length = 181458 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 223 aatgacgatgatgaggaggatga 245 ||||||||||||||||||||||| Sbjct: 91594 aatgacgatgatgaggaggatga 91572
>ref|XM_781516.1| PREDICTED: Strongylocentrotus purpuratus similar to CG5784-PB, isoform B (LOC581523), mRNA Length = 885 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 224 atgacgatgatgaggaggatgacgacgagga 254 ||||||| ||||| ||||||||||||||||| Sbjct: 701 atgacgaggatgatgaggatgacgacgagga 731 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 224 atgacgatgatgaggaggatga 245 |||||||||||||||||||||| Sbjct: 785 atgacgatgatgaggaggatga 806
>emb|X60831.1|MMUBF Mouse ubf gene for transcription factor UBF Length = 3031 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 224 atgacgatgatgaggaggatgacgacgagga 254 |||||||||| |||||||| ||||||||||| Sbjct: 2089 atgacgatgaggaggaggaggacgacgagga 2119
>emb|AL606659.3|OSJN00108 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0070J16, complete sequence Length = 130718 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 224 atgacgatgatgaggaggatgacgacgagga 254 |||| |||||||| ||||||||||||||||| Sbjct: 20879 atgaggatgatgacgaggatgacgacgagga 20849
>emb|AL606622.3|OSJN00059 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0004N05, complete sequence Length = 158601 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 224 atgacgatgatgaggaggatgacgacgagga 254 |||| |||||||| ||||||||||||||||| Sbjct: 127350 atgaggatgatgacgaggatgacgacgagga 127320
>gb|AC010107.7| Drosophila melanogaster 3L BAC RP98-2B1 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 181063 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 229 gatgatgaggaggatgacgacga 251 ||||||||||||||||||||||| Sbjct: 36776 gatgatgaggaggatgacgacga 36754
>dbj|AK128947.1| Mus musculus cDNA fis, clone TRACH3007595, highly similar to Nucleolar transcription factor 1 Length = 3042 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 224 atgacgatgatgaggaggatgacgacgagga 254 |||||||||| |||||||| ||||||||||| Sbjct: 2138 atgacgatgaggaggaggaggacgacgagga 2168
>ref|NM_168367.1| Drosophila melanogaster CG32046-RA, transcript variant A (CG32046), mRNA Length = 5367 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 229 gatgatgaggaggatgacgacga 251 ||||||||||||||||||||||| Sbjct: 4488 gatgatgaggaggatgacgacga 4466
>ref|NM_168366.2| Drosophila melanogaster CG32046-RB, transcript variant B (CG32046), mRNA Length = 5383 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 229 gatgatgaggaggatgacgacga 251 ||||||||||||||||||||||| Sbjct: 4504 gatgatgaggaggatgacgacga 4482
>gb|AY084162.1| Drosophila melanogaster RE37150 full insert cDNA Length = 1750 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 229 gatgatgaggaggatgacgacga 251 ||||||||||||||||||||||| Sbjct: 856 gatgatgaggaggatgacgacga 834
>gb|AC091220.3| Drosophila melanogaster 3L BAC RP98-7E7 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 179838 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 229 gatgatgaggaggatgacgacga 251 ||||||||||||||||||||||| Sbjct: 73336 gatgatgaggaggatgacgacga 73358
>dbj|AK158935.1| Mus musculus visual cortex cDNA, RIKEN full-length enriched library, clone:K530012F21 product:upstream binding transcription factor, RNA polymerase I, full insert sequence Length = 2931 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 224 atgacgatgatgaggaggatgacgacgagga 254 |||||||||| |||||||| ||||||||||| Sbjct: 2026 atgacgatgaggaggaggaggacgacgagga 2056
>dbj|AK158861.1| Mus musculus visual cortex cDNA, RIKEN full-length enriched library, clone:K430347D16 product:upstream binding transcription factor, RNA polymerase I, full insert sequence Length = 3014 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 224 atgacgatgatgaggaggatgacgacgagga 254 |||||||||| |||||||| ||||||||||| Sbjct: 2110 atgacgatgaggaggaggaggacgacgagga 2140
>gb|AY052056.1| Drosophila melanogaster LP08452 full length cDNA Length = 5403 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 229 gatgatgaggaggatgacgacga 251 ||||||||||||||||||||||| Sbjct: 4504 gatgatgaggaggatgacgacga 4482
>gb|AC154504.2| Mus musculus BAC clone RP24-92H14 from chromosome 14, complete sequence Length = 234665 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 199 gaagaggaggatgacgaccaggacaatgacgatga 233 ||||||||||| ||||| |||||||||||||||| Sbjct: 130182 gaagaggaggaggacgagaaggacaatgacgatga 130216
>ref|NM_067883.3| Caenorhabditis elegans Y67D8C.5 (Y67D8C.5) mRNA, complete cds Length = 12998 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 226 gacgatgatgaggaggatgacga 248 ||||||||||||||||||||||| Sbjct: 7582 gacgatgatgaggaggatgacga 7604
>dbj|AK038139.1| Mus musculus 16 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A130081D15 product:upstream binding transcription factor, RNA polymerase I, full insert sequence Length = 4360 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 224 atgacgatgatgaggaggatgacgacgagga 254 |||||||||| |||||||| ||||||||||| Sbjct: 3242 atgacgatgaggaggaggaggacgacgagga 3272
>dbj|AK004961.1| Mus musculus adult male liver cDNA, RIKEN full-length enriched library, clone:1300010N03 product:transcription factor UBF, full insert sequence Length = 3012 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 224 atgacgatgatgaggaggatgacgacgagga 254 |||||||||| |||||||| ||||||||||| Sbjct: 2107 atgacgatgaggaggaggaggacgacgagga 2137
>gb|AC161475.6| Pan troglodytes BAC clone CH251-252J1 from chromosome unknown, complete sequence Length = 177925 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 223 aatgacgatgatgaggaggatga 245 ||||||||||||||||||||||| Sbjct: 177723 aatgacgatgatgaggaggatga 177701
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 228 cgatgatgaggaggatgacgacgagga 254 ||||||||||||||| ||||||||||| Sbjct: 25797144 cgatgatgaggaggacgacgacgagga 25797170 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 235 gaggaggatgacgacgaggactcg 258 |||||||| ||||||||||||||| Sbjct: 23082370 gaggaggaagacgacgaggactcg 23082347 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 gatgaggaggatgacgacga 251 |||||||||||||||||||| Sbjct: 19592262 gatgaggaggatgacgacga 19592243
>gb|AC012373.14|AC012373 Drosophila melanogaster, chromosome X, region 17B-17C, BAC clone BACR17H16, complete sequence Length = 182080 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 224 atgacgatgatgaggaggatgacgacgagga 254 ||||||||||||| || |||||||||||||| Sbjct: 74694 atgacgatgatgatgatgatgacgacgagga 74664
>gb|AF151373.1|AF151373 Rattus norvegicus nucleolin-related protein NRP (NRP) mRNA, complete cds Length = 2148 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 232 gatgaggaggatgacgacgagga 254 ||||||||||||||||||||||| Sbjct: 739 gatgaggaggatgacgacgagga 761
>gb|AE003551.3| Drosophila melanogaster chromosome 3L, section 34 of 83 of the complete sequence Length = 285860 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 229 gatgatgaggaggatgacgacga 251 ||||||||||||||||||||||| Sbjct: 257918 gatgatgaggaggatgacgacga 257940
>gb|AE003509.5| Drosophila melanogaster chromosome X, section 61 of 74 of the complete sequence Length = 315109 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 224 atgacgatgatgaggaggatgacgacgagga 254 ||||||||||||| || |||||||||||||| Sbjct: 139118 atgacgatgatgatgatgatgacgacgagga 139088
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 228 cgatgatgaggaggatgacgacgagga 254 ||||||||||||||| ||||||||||| Sbjct: 25725320 cgatgatgaggaggacgacgacgagga 25725346 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 235 gaggaggatgacgacgaggactcg 258 |||||||| ||||||||||||||| Sbjct: 23010561 gaggaggaagacgacgaggactcg 23010538 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 gatgaggaggatgacgacga 251 |||||||||||||||||||| Sbjct: 19518475 gatgaggaggatgacgacga 19518456
>emb|AL928780.5|CNS08CCA Oryza sativa chromosome 12, . BAC OSJNBa0018C20 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 137492 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 228 cgatgatgaggaggatgacgacgagga 254 ||||||||||||||| ||||||||||| Sbjct: 18595 cgatgatgaggaggacgacgacgagga 18621
>emb|AL731881.4|CNS08C8L Oryza sativa chromosome 12, . BAC OSJNBa0002L05 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 167131 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 228 cgatgatgaggaggatgacgacgagga 254 ||||||||||||||| ||||||||||| Sbjct: 164382 cgatgatgaggaggacgacgacgagga 164408
>emb|AL954730.15| Mouse DNA sequence from clone RP23-461C4 on chromosome 11, complete sequence Length = 193721 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 224 atgacgatgatgaggaggatgacgacgagga 254 |||||||||| |||||||| ||||||||||| Sbjct: 140552 atgacgatgaggaggaggaggacgacgagga 140522
>emb|X56936.1|MMSP6718 Mouse rearranged Sp6-718 gene for Ig mu (5) heavy chain variable region (VHII subgroup, anti TNP antibody) Length = 3260 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 220 gacaatgacgatgatgaggagga 242 ||||||||||||||||||||||| Sbjct: 341 gacaatgacgatgatgaggagga 319
>ref|XM_637647.1| Dictyostelium discoideum hypothetical protein (DDB0169123), partial mRNA Length = 5868 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 224 atgacgatgatgaggaggatga 245 |||||||||||||||||||||| Sbjct: 1007 atgacgatgatgaggaggatga 1028
>ref|XM_468022.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3042 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 235 gaggaggatgacgacgaggact 256 |||||||||||||||||||||| Sbjct: 190 gaggaggatgacgacgaggact 211
>ref|NM_190688.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1101 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 226 gacgatgatgaggaggatgacgacga 251 |||||||| ||||||||||||||||| Sbjct: 367 gacgatgaggaggaggatgacgacga 392
>gb|AE017349.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 9, complete sequence Length = 1178688 Score = 44.1 bits (22), Expect = 0.47 Identities = 34/38 (89%) Strand = Plus / Plus Query: 205 gaggatgacgaccaggacaatgacgatgatgaggagga 242 ||||||||||| |||| ||||||||||| |||||||| Sbjct: 427785 gaggatgacgaggaggagaatgacgatgacgaggagga 427822
>gb|AC116977.2| Dictyostelium discoideum chromosome 2 map 5515173-5817331 strain AX4, complete sequence Length = 302156 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 224 atgacgatgatgaggaggatga 245 |||||||||||||||||||||| Sbjct: 155888 atgacgatgatgaggaggatga 155867
>ref|XM_752727.1| Ustilago maydis 521 hypothetical protein (UM01673.1) partial mRNA Length = 2568 Score = 44.1 bits (22), Expect = 0.47 Identities = 46/54 (85%) Strand = Plus / Plus Query: 198 agaagaggaggatgacgaccaggacaatgacgatgatgaggaggatgacgacga 251 |||||| ||||| ||||| ||||| ||||||| ||||| || ||||||||||| Sbjct: 2424 agaagaagaggacgacgaggaggacgatgacgacgatgacgacgatgacgacga 2477
>ref|XM_742959.1| Aspergillus fumigatus Af293 SET translocation (Afu5g02910) partial mRNA Length = 1065 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Plus Query: 226 gacgatgatgaggaggatgacgacgaggac 255 |||||||| ||||| ||||||||||||||| Sbjct: 814 gacgatgaggaggatgatgacgacgaggac 843
>ref|XM_744391.1| Aspergillus fumigatus Af293 calcium/calmodulin-dependent protein kinase (Afu2g03490) partial mRNA Length = 1938 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Plus Query: 218 aggacaatgacgatgatgaggaggatgacg 247 ||||||| ||||||||||| |||||||||| Sbjct: 1595 aggacaacgacgatgatgaagaggatgacg 1624
>ref|XM_388733.1| Gibberella zeae PH-1 chromosome 2 hypothetical protein (FG08557.1) partial mRNA Length = 4374 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Minus Query: 63 cgaggatgacgatgaagaacccgagg 88 |||||||||||||||||| ||||||| Sbjct: 2268 cgaggatgacgatgaagatcccgagg 2243
>ref|XM_572960.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNI01450) partial mRNA Length = 1569 Score = 44.1 bits (22), Expect = 0.47 Identities = 34/38 (89%) Strand = Plus / Plus Query: 205 gaggatgacgaccaggacaatgacgatgatgaggagga 242 ||||||||||| |||| ||||||||||| |||||||| Sbjct: 1303 gaggatgacgaggaggagaatgacgatgacgaggagga 1340
>emb|Z49908.1|CEC07E3 Caenorhabditis elegans Cosmid C07E3, complete sequence Length = 43815 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Minus Query: 224 atgacgatgatgaggaggatgacgac 249 |||| ||||||||||||||||||||| Sbjct: 1796 atgaggatgatgaggaggatgacgac 1771
>ref|XM_787591.1| PREDICTED: Strongylocentrotus purpuratus similar to MoKA (LOC587881), mRNA Length = 3243 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 224 atgacgatgatgaggaggatga 245 |||||||||||||||||||||| Sbjct: 2249 atgacgatgatgaggaggatga 2270
>ref|XM_501534.1| Yarrowia lipolytica CLIB122, YALI0C06864g predicted mRNA Length = 1059 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Plus Query: 226 gacgatgatgaggaggatgacgacgaggac 255 ||||| |||||||| ||||||||||||||| Sbjct: 271 gacgacgatgaggatgatgacgacgaggac 300
>ref|XM_505279.1| Yarrowia lipolytica CLIB122, YALI0F11253g predicted mRNA Length = 2439 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Plus Query: 225 tgacgatgatgaggaggatgacgacgagga 254 |||||||||||| ||||||||||| ||||| Sbjct: 1266 tgacgatgatgacgaggatgacgaggagga 1295
>ref|XM_788904.1| PREDICTED: Strongylocentrotus purpuratus similar to neuroblastoma-amplified protein (LOC589257), mRNA Length = 7077 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 224 atgacgatgatgaggaggatga 245 |||||||||||||||||||||| Sbjct: 1907 atgacgatgatgaggaggatga 1928
>ref|XM_793082.1| PREDICTED: Strongylocentrotus purpuratus similar to M-phase phosphoprotein 10 (LOC593611), mRNA Length = 1989 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 229 gatgatgaggaggatgacgacgagga 254 |||||||||||||||||||| ||||| Sbjct: 667 gatgatgaggaggatgacgatgagga 692
>ref|XM_776064.1| PREDICTED: Strongylocentrotus purpuratus similar to Poly [ADP-ribose] polymerase-4 (PARP-4) (Vault poly(ADP-ribose) polymerase) (VPARP) (193-kDa vault protein) (PARP-related/IalphaI-related H5/proline-rich) (PH5P) (LOC575677), mRNA Length = 2991 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 230 atgatgaggaggatgacgacga 251 |||||||||||||||||||||| Sbjct: 1238 atgatgaggaggatgacgacga 1259
>emb|BX294153.1| Pirellula sp. strain 1 complete genome; segment 21/24 Length = 293350 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Plus Query: 226 gacgatgatgaggaggatgacgacgaggac 255 |||||||||||||| || |||||||||||| Sbjct: 183985 gacgatgatgaggatgaagacgacgaggac 184014
>gb|AF411057.1|AF411057 Homo sapiens clone BAC_22606 CD28 antigen (CD28) gene, exons 1, 2 and 3, and partial cds Length = 66887 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 222 caatgacgatgatgaggaggat 243 |||||||||||||||||||||| Sbjct: 43465 caatgacgatgatgaggaggat 43486
>gb|AF374405.1|AF374405 Zea mays long cell-linked locus protein gene, complete cds Length = 3620 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 226 gacgatgatgaggaggatgacgacga 251 ||||||||||||||||| |||||||| Sbjct: 2459 gacgatgatgaggaggaggacgacga 2484
>emb|BX510996.12| Zebrafish DNA sequence from clone DKEYP-81E1 in linkage group 21, complete sequence Length = 197012 Score = 44.1 bits (22), Expect = 0.47 Identities = 40/46 (86%) Strand = Plus / Minus Query: 206 aggatgacgaccaggacaatgacgatgatgaggaggatgacgacga 251 ||||||||||| ||||| |||| || || || |||||||||||||| Sbjct: 125345 aggatgacgacgaggacgatgatgaggaagaagaggatgacgacga 125300
>gb|AF337035.1|AF337035 Danio rerio roundabout2 (robo2) mRNA, complete cds Length = 4871 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 224 atgacgatgatgaggaggatga 245 |||||||||||||||||||||| Sbjct: 3994 atgacgatgatgaggaggatga 4015
>gb|AF281817.1|AF281817 Tupaia herpesvirus strain 2, complete genome Length = 195859 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Plus Query: 226 gacgatgatgaggaggatgacgacgaggac 255 ||||| ||||||||||| |||||||||||| Sbjct: 187577 gacgaggatgaggaggacgacgacgaggac 187606
>ref|NM_063823.2| Caenorhabditis elegans C07E3.2 (C07E3.2) mRNA, complete cds Length = 2307 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 224 atgacgatgatgaggaggatgacgac 249 |||| ||||||||||||||||||||| Sbjct: 367 atgaggatgatgaggaggatgacgac 392
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Minus Query: 226 gacgatgatgaggaggatgacgacga 251 |||||||| ||||||||||||||||| Sbjct: 37141848 gacgatgaggaggaggatgacgacga 37141823 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 224 atgacgatgatgaggaggatgacgacga 251 |||| ||||||||||| ||||||||||| Sbjct: 26739448 atgaggatgatgaggatgatgacgacga 26739421 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 gatgaggaggatgacgacga 251 |||||||||||||||||||| Sbjct: 21370244 gatgaggaggatgacgacga 21370263
>gb|AC010580.5|AC010580 Drosophila melanogaster, chromosome 3R, region 96F-96F, BAC clone BACR48J06, complete sequence Length = 163970 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 224 atgacgatgatgaggaggatga 245 |||||||||||||||||||||| Sbjct: 48676 atgacgatgatgaggaggatga 48697
>gb|AC010579.9|AC010579 Drosophila melanogaster, chromosome 3R, region 96F-96F, BAC clone BACR09D08, complete sequence Length = 167396 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 224 atgacgatgatgaggaggatga 245 |||||||||||||||||||||| Sbjct: 136619 atgacgatgatgaggaggatga 136640
>gb|AC125238.5| Homo sapiens BAC clone RP11-711C24 from 2, complete sequence Length = 196622 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 222 caatgacgatgatgaggaggat 243 |||||||||||||||||||||| Sbjct: 99984 caatgacgatgatgaggaggat 100005
>dbj|AP003794.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0489B03 Length = 150381 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Minus Query: 226 gacgatgatgaggaggatgacgacga 251 |||||||| ||||||||||||||||| Sbjct: 16504 gacgatgaggaggaggatgacgacga 16479
>dbj|AP003289.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0683F02 Length = 153388 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Minus Query: 226 gacgatgatgaggaggatgacgacga 251 |||||||| ||||||||||||||||| Sbjct: 142989 gacgatgaggaggaggatgacgacga 142964
>dbj|BA000004.3| Bacillus halodurans C-125 DNA, complete genome Length = 4202352 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 224 atgacgatgatgaggaggatga 245 |||||||||||||||||||||| Sbjct: 73599 atgacgatgatgaggaggatga 73578
>dbj|AP004068.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1611_C08 Length = 135386 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 235 gaggaggatgacgacgaggact 256 |||||||||||||||||||||| Sbjct: 30620 gaggaggatgacgacgaggact 30641
>dbj|AP004058.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1353_F08 Length = 101988 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 235 gaggaggatgacgacgaggact 256 |||||||||||||||||||||| Sbjct: 100222 gaggaggatgacgacgaggact 100243
>gb|AF225899.1|AF225899 Homo sapiens PAC clone 219d7, complete sequence Length = 106539 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 222 caatgacgatgatgaggaggat 243 |||||||||||||||||||||| Sbjct: 42623 caatgacgatgatgaggaggat 42644
>dbj|AK064334.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-G07, full insert sequence Length = 1741 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 226 gacgatgatgaggaggatgacgacga 251 |||||||| ||||||||||||||||| Sbjct: 531 gacgatgaggaggaggatgacgacga 556
>gb|AE003753.3| Drosophila melanogaster chromosome 3R, section 91 of 118 of the complete sequence Length = 226793 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 224 atgacgatgatgaggaggatga 245 |||||||||||||||||||||| Sbjct: 43692 atgacgatgatgaggaggatga 43713
>gb|AY664417.1| Zea mays cultivar Mo17 locus 9002, complete sequence Length = 366120 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 224 atgacgatgatgaggaggatgacgac 249 ||||||||||||| |||||||||||| Sbjct: 40215 atgacgatgatgacgaggatgacgac 40240
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Plus Query: 225 tgacgatgatgaggaggatgacgacgagga 254 |||||||||||| ||||||||||| ||||| Sbjct: 1491206 tgacgatgatgacgaggatgacgaggagga 1491235 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 224 atgacgatgatgaggaggatg 244 ||||||||||||||||||||| Sbjct: 1935869 atgacgatgatgaggaggatg 1935849
>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica Length = 3272609 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Plus Query: 226 gacgatgatgaggaggatgacgacgaggac 255 ||||| |||||||| ||||||||||||||| Sbjct: 920824 gacgacgatgaggatgatgacgacgaggac 920853
>ref|NM_131633.1| Danio rerio roundabout homolog 2 (robo2), mRNA Length = 4871 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 224 atgacgatgatgaggaggatga 245 |||||||||||||||||||||| Sbjct: 3994 atgacgatgatgaggaggatga 4015
>emb|Y08925.1|PFAARP3EX P.falciparum aarp3 gene, exon Length = 974 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 223 aatgacgatgatgaggaggatgacga 248 ||||||||||||||||| |||||||| Sbjct: 731 aatgacgatgatgaggaagatgacga 756 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 223 aatgacgatgatgaggaggatgacga 248 ||||||||||||||||| |||||||| Sbjct: 605 aatgacgatgatgaggaagatgacga 630 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 224 atgacgatgatgaggaggatgacga 248 |||||||||||||||| |||||||| Sbjct: 750 atgacgatgatgaggaagatgacga 774 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 224 atgacgatgatgaggaggatgacga 248 |||||||||||||||| |||||||| Sbjct: 624 atgacgatgatgaggaagatgacga 648
>gb|M85307.1|SCMSMOXVI Schistosoma mansoni homeodomain protein (smox-6) gene, 3' end Length = 804 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 220 gacaatgacgatgatgaggaggatga 245 |||||||| ||||||||||||||||| Sbjct: 308 gacaatgatgatgatgaggaggatga 333
>ref|NM_127777.2| Arabidopsis thaliana unknown protein AT2G22080 mRNA, complete cds Length = 863 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 257 cgctccagcccccgaagaagaggaagaagtgaa 289 |||| ||||| || ||||||||||||||||||| Sbjct: 646 cgcttcagccaccaaagaagaggaagaagtgaa 678
>ref|NM_001035374.1| Bos taurus similar to Calsequestrin, cardiac muscle isoform precursor (Calsequestrin 2) (MGC128222), mRNA Length = 2656 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 227 acgatgatgaggaggatgacgacga 251 ||||||||||||||||||| ||||| Sbjct: 1345 acgatgatgaggaggatgaagacga 1369
>ref|XM_550485.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1792 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 205 gaggatgacgaccaggacaatgacgatga 233 |||||||||||| | |||||||||||||| Sbjct: 784 gaggatgacgacgatgacaatgacgatga 812
>ref|XM_467454.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2072 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 229 gatgatgaggaggatgacgacgaggactc 257 |||||||||||||||||||| || ||||| Sbjct: 548 gatgatgaggaggatgacgatgacgactc 576
>gb|AC159409.1| Trypanosoma brucei chromosome 7 clone RPCI93-15M23, complete sequence Length = 157301 Score = 42.1 bits (21), Expect = 1.9 Identities = 39/45 (86%) Strand = Plus / Minus Query: 202 gaggaggatgacgaccaggacaatgacgatgatgaggaggatgac 246 ||||||||||||||| | || |||| ||||||||||| |||||| Sbjct: 86212 gaggaggatgacgacgaagaggatgatgatgatgaggatgatgac 86168 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 gatgaggaggatgacgacga 251 |||||||||||||||||||| Sbjct: 86245 gatgaggaggatgacgacga 86226 Score = 40.1 bits (20), Expect = 7.4 Identities = 43/50 (86%), Gaps = 3/50 (6%) Strand = Plus / Minus Query: 202 gaggaggatgacgaccaggacaatgacgatgatgaggaggatgacgacga 251 ||||||||||||||| ||| | || || |||||||||||||||||||| Sbjct: 86242 gaggaggatgacgac---gacgaggaagacgatgaggaggatgacgacga 86196
>gb|AC160028.9| Mus musculus 10 BAC RP24-570M12 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 223055 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 224 atgacgatgatgaggaggatgacga 248 ||||||| ||||||||||||||||| Sbjct: 59318 atgacgacgatgaggaggatgacga 59294
>gb|U93872.2| Kaposi's sarcoma-associated herpesvirus glycoprotein M, DNA replication protein, glycoprotein, DNA replication protein, FLICE inhibitory protein and v-cyclin genes, complete cds, and tegument protein gene, partial cds Length = 133661 Score = 42.1 bits (21), Expect = 1.9 Identities = 45/53 (84%) Strand = Plus / Minus Query: 202 gaggaggatgacgaccaggacaatgacgatgatgaggaggatgacgacgagga 254 |||||||| || ||| |||| |||||||||||||||| |||| |||||||| Sbjct: 126411 gaggaggaggaggacgaggaggatgacgatgatgaggacaatgaggacgagga 126359
>gb|AE017356.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 14, complete sequence Length = 762694 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 218 aggacaatgacgatgatgagg 238 ||||||||||||||||||||| Sbjct: 87911 aggacaatgacgatgatgagg 87891
>gb|CP000070.1| Trypanosoma brucei chromosome 7, complete sequence Length = 2205233 Score = 42.1 bits (21), Expect = 1.9 Identities = 39/45 (86%) Strand = Plus / Minus Query: 202 gaggaggatgacgaccaggacaatgacgatgatgaggaggatgac 246 ||||||||||||||| | || |||| ||||||||||| |||||| Sbjct: 1844227 gaggaggatgacgacgaagaggatgatgatgatgaggatgatgac 1844183 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 gatgaggaggatgacgacga 251 |||||||||||||||||||| Sbjct: 1844260 gatgaggaggatgacgacga 1844241 Score = 40.1 bits (20), Expect = 7.4 Identities = 43/50 (86%), Gaps = 3/50 (6%) Strand = Plus / Minus Query: 202 gaggaggatgacgaccaggacaatgacgatgatgaggaggatgacgacga 251 ||||||||||||||| ||| | || || |||||||||||||||||||| Sbjct: 1844257 gaggaggatgacgac---gacgaggaagacgatgaggaggatgacgacga 1844211
>gb|AY660596.1| Atrina rigida clone Asprich_2 unknown mRNA Length = 577 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 229 gatgatgaggaggatgacgac 249 ||||||||||||||||||||| Sbjct: 440 gatgatgaggaggatgacgac 460
>gb|AC102154.9| Mus musculus chromosome 1, clone RP23-333I7, complete sequence Length = 195954 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 270 gaagaagaggaagaagtgaag 290 ||||||||||||||||||||| Sbjct: 95331 gaagaagaggaagaagtgaag 95311
>gb|AC010846.13| Drosophila melanogaster clone BACR13G13, complete sequence Length = 192540 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 224 atgacgatgatgaggaggatgacga 248 |||||||||| |||||||||||||| Sbjct: 178337 atgacgatgacgaggaggatgacga 178361
>ref|XM_958595.1| Neurospora crassa OR74A hypothetical protein (NCU09370.1) partial mRNA Length = 2775 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 205 gaggatgacgaccaggacaatgacgatgatgaggaggatga 245 ||||| ||||| ||||||| ||||||||||||||||||| Sbjct: 1345 gaggaagacgatgaggacaactacgatgatgaggaggatga 1385
>ref|XM_332061.1| Neurospora crassa OR74A hypothetical protein (NCU09370.1) partial mRNA Length = 2775 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 205 gaggatgacgaccaggacaatgacgatgatgaggaggatga 245 ||||| ||||| ||||||| ||||||||||||||||||| Sbjct: 1345 gaggaagacgatgaggacaactacgatgatgaggaggatga 1385
>ref|XM_457093.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0B02981g) partial mRNA Length = 1683 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 198 agaagaggaggatgacgacca 218 ||||||||||||||||||||| Sbjct: 1230 agaagaggaggatgacgacca 1250
>ref|XM_712857.1| Candida albicans SC5314 hypothetical protein (CaO19_3260), mRNA Length = 2196 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 208 gatgacgaccaggacaatgacgatgatgaggaggatgacga 248 ||||||||| | ||| ||||||||||||| || |||||||| Sbjct: 1846 gatgacgacgatgacgatgacgatgatgatgatgatgacga 1886
>ref|XM_712791.1| Candida albicans SC5314 hypothetical protein (CaO19_10770), mRNA Length = 2196 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 208 gatgacgaccaggacaatgacgatgatgaggaggatgacga 248 ||||||||| | ||| ||||||||||||| || |||||||| Sbjct: 1846 gatgacgacgatgacgatgacgatgatgatgatgatgacga 1886
>gb|AC104279.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1393_A07, complete sequence Length = 159932 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 235 gaggaggatgacgacgaggac 255 ||||||||||||||||||||| Sbjct: 50204 gaggaggatgacgacgaggac 50184
>ref|XM_451031.1| Kluyveromyces lactis NRRL Y-1140, KLLA0A00737g predicted mRNA Length = 1749 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 224 atgacgatgatgaggaggatgacga 248 ||||| ||||||||||||||||||| Sbjct: 167 atgacaatgatgaggaggatgacga 191
>gb|AC146542.2| Gasterosteus aculeatus clone CH213-58L3, complete sequence Length = 231097 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 226 gacgatgatgaggaggatgacgacgagga 254 ||||| ||||||||||||||||| ||||| Sbjct: 138618 gacgaggatgaggaggatgacgaggagga 138646
>gb|AF148805.2| Human herpesvirus 8 isolate GK18, complete genome Length = 137969 Score = 42.1 bits (21), Expect = 1.9 Identities = 45/53 (84%) Strand = Plus / Minus Query: 202 gaggaggatgacgaccaggacaatgacgatgatgaggaggatgacgacgagga 254 |||||||| || ||| |||| |||||||||||||||| |||| |||||||| Sbjct: 126288 gaggaggaggaggacgaggaggatgacgatgatgaggacaatgaggacgagga 126236
>ref|XM_818585.1| Trypanosoma brucei TREU927 clone RPCI93-15M23 protein kinase (Tb927.7.6680) partial mRNA Length = 2700 Score = 42.1 bits (21), Expect = 1.9 Identities = 39/45 (86%) Strand = Plus / Plus Query: 202 gaggaggatgacgaccaggacaatgacgatgatgaggaggatgac 246 ||||||||||||||| | || |||| ||||||||||| |||||| Sbjct: 886 gaggaggatgacgacgaagaggatgatgatgatgaggatgatgac 930 Score = 40.1 bits (20), Expect = 7.4 Identities = 43/50 (86%), Gaps = 3/50 (6%) Strand = Plus / Plus Query: 202 gaggaggatgacgaccaggacaatgacgatgatgaggaggatgacgacga 251 ||||||||||||||| ||| | || || |||||||||||||||||||| Sbjct: 856 gaggaggatgacgac---gacgaggaagacgatgaggaggatgacgacga 902 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 gatgaggaggatgacgacga 251 |||||||||||||||||||| Sbjct: 853 gatgaggaggatgacgacga 872
>ref|XM_568529.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNN00210) partial mRNA Length = 2169 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 218 aggacaatgacgatgatgagg 238 ||||||||||||||||||||| Sbjct: 1537 aggacaatgacgatgatgagg 1517
>gb|AC127549.3| Mus musculus BAC clone RP24-510G5 from chromosome 5, complete sequence Length = 152564 Score = 42.1 bits (21), Expect = 1.9 Identities = 45/53 (84%) Strand = Plus / Minus Query: 202 gaggaggatgacgaccaggacaatgacgatgatgaggaggatgacgacgagga 254 |||||||| |||||| ||||| | || || || |||||||| ||||||||||| Sbjct: 122710 gaggaggacgacgacgaggacgaggaagaggaggaggaggacgacgacgagga 122658
>gb|AC121841.3| Mus musculus BAC clone RP24-80D5 from chromosome 5, complete sequence Length = 199487 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 208 gatgacgaccaggacaatgacgatgatga 236 ||||||||| | ||||||||||||||||| Sbjct: 138751 gatgacgacgaagacaatgacgatgatga 138779
>ref|XM_643437.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (440.t00002) partial mRNA Length = 438 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 271 aagaagaggaagaagtgaagc 291 ||||||||||||||||||||| Sbjct: 120 aagaagaggaagaagtgaagc 140
>ref|XM_643440.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (439.t00002) partial mRNA Length = 396 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 271 aagaagaggaagaagtgaagc 291 ||||||||||||||||||||| Sbjct: 350 aagaagaggaagaagtgaagc 370
>gb|AC166551.2| Nectria haematococca clone JGIAYWI-9J5, complete sequence Length = 35081 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 226 gacgatgatgaggaggatgacgacgagga 254 |||| ||||||||| |||||||||||||| Sbjct: 21496 gacgttgatgaggatgatgacgacgagga 21524
>emb|AL512410.14| Human DNA sequence from clone RP11-100E6 on chromosome 6, complete sequence Length = 160891 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 334 tgggatgtgcctgttcttcac 354 ||||||||||||||||||||| Sbjct: 26472 tgggatgtgcctgttcttcac 26492
>ref|XM_499854.1| Yarrowia lipolytica CLIB122, YALI0A07821g predicted mRNA Length = 1452 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 226 gacgatgatgaggaggatgacgacgagga 254 ||||| |||||||||||||| |||||||| Sbjct: 316 gacgaagatgaggaggatgaagacgagga 344
>ref|XM_500886.1| Yarrowia lipolytica CLIB122, YALI0B14487g predicted mRNA Length = 1272 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 226 gacgatgatgaggaggatgacgacgagga 254 ||||||| |||||||||||| |||||||| Sbjct: 496 gacgatgttgaggaggatgaggacgagga 524
>ref|XM_502264.1| Yarrowia lipolytica CLIB122, YALI0D00957g predicted mRNA Length = 1734 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 227 acgatgatgaggaggatgacgacga 251 ||||||||||||||||||| ||||| Sbjct: 611 acgatgatgaggaggatgaggacga 635
>ref|XM_505416.1| Yarrowia lipolytica CLIB122, YALI0F14509g predicted mRNA Length = 3876 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 224 atgacgatgatgaggaggatg 244 ||||||||||||||||||||| Sbjct: 3566 atgacgatgatgaggaggatg 3586
>gb|AF083975.2| Fowl adenovirus 9, complete genome Length = 45063 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 265 cccccgaagaagaggaagaag 285 ||||||||||||||||||||| Sbjct: 11968 cccccgaagaagaggaagaag 11948
>gb|AC159971.4| Mus musculus chromosome 5, clone RP23-263G19, complete sequence Length = 163375 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 208 gatgacgaccaggacaatgacgatgatga 236 ||||||||| | ||||||||||||||||| Sbjct: 44745 gatgacgacgaagacaatgacgatgatga 44773
>ref|XM_786860.1| PREDICTED: Strongylocentrotus purpuratus similar to CG10009-PA (LOC587108), mRNA Length = 615 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 226 gacgatgatgaggaggatgacgacgagga 254 |||||||||||||||||||| || ||||| Sbjct: 511 gacgatgatgaggaggatgaggaagagga 539
>ref|XM_961755.1| PREDICTED: Tribolium castaneum similar to CG6755-PB, isoform B (LOC655241), partial mRNA Length = 1751 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 226 gacgatgatgaggaggatgacgacgagga 254 |||||||||||||| || ||||||||||| Sbjct: 277 gacgatgatgaggatgaggacgacgagga 305
>emb|BX063858.1|CNS09LFQ Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC45DF09 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 232 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 226 gacgatgatgaggaggatgacgacgagga 254 ||||||||||| ||||||||||| ||||| Sbjct: 187 gacgatgatgatgaggatgacgatgagga 159
>gb|AC123178.4| Rattus norvegicus 7 BAC CH230-20I17 (Children's Hospital Oakland Research Institute) complete sequence Length = 221236 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 220 gacaatgacgatgatgaggaggatgacga 248 ||||||||||||||||| || |||||||| Sbjct: 187945 gacaatgacgatgatgatgacgatgacga 187917
>emb|BX039302.1|CNS092HM Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC1AD03 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 775 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 226 gacgatgatgaggaggatgacgacgagga 254 ||||||||||| ||||||||||| ||||| Sbjct: 196 gacgatgatgatgaggatgacgatgagga 168
>emb|BX039301.1|CNS092HL Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC1AD03 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1030 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 226 gacgatgatgaggaggatgacgacgagga 254 ||||||||||| ||||||||||| ||||| Sbjct: 709 gacgatgatgatgaggatgacgatgagga 737
>ref|XM_791241.1| PREDICTED: Strongylocentrotus purpuratus similar to Ran-binding protein 3 (RanBP3) (LOC591690), mRNA Length = 956 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 230 atgatgaggaggatgacgacgagga 254 |||||||||||||||| |||||||| Sbjct: 725 atgatgaggaggatgaggacgagga 749
>ref|XM_780219.1| PREDICTED: Strongylocentrotus purpuratus similar to modulator of estrogen induced transcription isoform b (LOC580147), mRNA Length = 789 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 53 aggagaatggcgaggatgacgatga 77 |||||||| |||||||||||||||| Sbjct: 377 aggagaatagcgaggatgacgatga 353
>emb|Y08035.1|DMRDGBPT D.melanogaster mRNA for retinal degeneration B protein Length = 4310 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 235 gaggaggatgacgacgaggac 255 ||||||||||||||||||||| Sbjct: 1402 gaggaggatgacgacgaggac 1422
>emb|X57978.1|DMRDGB D. melanogaster rdgB mRNA for retinal degeneration B protein Length = 4308 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 235 gaggaggatgacgacgaggac 255 ||||||||||||||||||||| Sbjct: 1402 gaggaggatgacgacgaggac 1422
>emb|CR382134.1| Debaryomyces hansenii chromosome B of strain CBS767 of Debaryomyces hansenii Length = 1349926 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 198 agaagaggaggatgacgacca 218 ||||||||||||||||||||| Sbjct: 244082 agaagaggaggatgacgacca 244102
>emb|CR382121.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome A of strain NRRL Y-1140 of Kluyveromyces lactis Length = 1062590 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 224 atgacgatgatgaggaggatgacga 248 ||||| ||||||||||||||||||| Sbjct: 72399 atgacaatgatgaggaggatgacga 72423
>emb|CR938362.1| Single read from an extremity of a full-length cDNA clone made from Aedes aegypti total adult females. 5-prime end of clone KW0AAA2YB18AAM1 from strain Liverpool of Aedes aegypti (yellow fever mosquito) Length = 787 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Plus Query: 61 ggcgaggatgacgatgaagaacccgaggagcaggagg 97 |||| ||||||||||||||| | ||||||| |||||| Sbjct: 480 ggcggggatgacgatgaagagctcgaggaggaggagg 516
>gb|BC105185.1| Bos taurus similar to Calsequestrin, cardiac muscle isoform precursor (Calsequestrin 2), mRNA (cDNA clone MGC:128222 IMAGE:7985815), complete cds Length = 2656 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 227 acgatgatgaggaggatgacgacga 251 ||||||||||||||||||| ||||| Sbjct: 1345 acgatgatgaggaggatgaagacga 1369
>gb|AC023745.3| Drosophila melanogaster X BAC RP98-26N1 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 179312 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 227 acgatgatgaggaggatgacgacgaggac 255 ||||||| ||||||||||| ||||||||| Sbjct: 136759 acgatgaggaggaggatgaggacgaggac 136731 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 gacgatgatgaggaggatga 245 |||||||||||||||||||| Sbjct: 136790 gacgatgatgaggaggatga 136771
>gb|AC023693.4| Drosophila melanogaster X BAC RP98-17B23 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 164969 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 227 acgatgatgaggaggatgacgacgaggac 255 ||||||| ||||||||||| ||||||||| Sbjct: 41413 acgatgaggaggaggatgaggacgaggac 41385 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 gacgatgatgaggaggatga 245 |||||||||||||||||||| Sbjct: 41444 gacgatgatgaggaggatga 41425
>ref|NM_167521.2| Drosophila melanogaster hangover CG32575-RA, transcript variant A (hang), mRNA Length = 6907 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 224 atgacgatgatgaggaggatgacga 248 |||||||||| |||||||||||||| Sbjct: 4236 atgacgatgacgaggaggatgacga 4260
>ref|NM_167520.2| Drosophila melanogaster hangover CG32575-RB, transcript variant B (hang), mRNA Length = 6860 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 224 atgacgatgatgaggaggatgacga 248 |||||||||| |||||||||||||| Sbjct: 4236 atgacgatgacgaggaggatgacga 4260
>ref|NM_167382.1| Drosophila melanogaster retinal degeneration B CG11111-RA, transcript variant A (rdgB), mRNA Length = 4188 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 235 gaggaggatgacgacgaggac 255 ||||||||||||||||||||| Sbjct: 1368 gaggaggatgacgacgaggac 1388
>gb|AC007232.6| Arabidopsis thaliana chromosome 2 clone T16B14 map mi238, complete sequence Length = 45943 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 257 cgctccagcccccgaagaagaggaagaagtgaa 289 |||| ||||| || ||||||||||||||||||| Sbjct: 29189 cgcttcagccaccaaagaagaggaagaagtgaa 29157
>ref|NM_132445.1| Drosophila melanogaster C901 CG1567-RA (C901), mRNA Length = 1747 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 227 acgatgatgaggaggatgacgacgaggac 255 ||||||| ||||||||||| ||||||||| Sbjct: 1674 acgatgaggaggaggatgaggacgaggac 1702 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 gacgatgatgaggaggatga 245 |||||||||||||||||||| Sbjct: 1643 gacgatgatgaggaggatga 1662
>ref|NM_078594.2| Drosophila melanogaster retinal degeneration B CG11111-RB, transcript variant B (rdgB), mRNA Length = 4300 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 235 gaggaggatgacgacgaggac 255 ||||||||||||||||||||| Sbjct: 1392 gaggaggatgacgacgaggac 1412
>ref|NM_001014741.1| Drosophila melanogaster retinal degeneration B CG11111-RC, transcript variant C (rdgB), mRNA Length = 4208 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 235 gaggaggatgacgacgaggac 255 ||||||||||||||||||||| Sbjct: 1388 gaggaggatgacgacgaggac 1408
>ref|NM_001014740.1| Drosophila melanogaster retinal degeneration B CG11111-RD, transcript variant D (rdgB), mRNA Length = 4150 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 235 gaggaggatgacgacgaggac 255 ||||||||||||||||||||| Sbjct: 1330 gaggaggatgacgacgaggac 1350
>gb|AF188480.1|AF188480 Macropodid herpesvirus 1 ICP0 (RL-2), ICP34.5 (RL-1), thymidylate synthase, and ICP4 (RS-1) genes, complete cds Length = 13610 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 226 gacgatgatgaggaggatgacgacgagga 254 |||||||||||||||||||| || ||||| Sbjct: 11466 gacgatgatgaggaggatgatgatgagga 11494
>gb|AY051422.1| Drosophila melanogaster GH09970 full length cDNA Length = 4188 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 235 gaggaggatgacgacgaggac 255 ||||||||||||||||||||| Sbjct: 1368 gaggaggatgacgacgaggac 1388
>gb|AC148918.3| Medicago truncatula chromosome 2 BAC clone mth2-44o11, complete sequence Length = 126437 Score = 42.1 bits (21), Expect = 1.9 Identities = 39/45 (86%) Strand = Plus / Plus Query: 198 agaagaggaggatgacgaccaggacaatgacgatgatgaggagga 242 |||||| |||||||| || || ||||||||||||| |||||||| Sbjct: 108163 agaagatgaggatgaggaacaaaacaatgacgatgaggaggagga 108207
>gb|AF360120.1|AF360120 Human herpesvirus 8 ORF73 gene, complete cds Length = 3012 Score = 42.1 bits (21), Expect = 1.9 Identities = 45/53 (84%) Strand = Plus / Plus Query: 202 gaggaggatgacgaccaggacaatgacgatgatgaggaggatgacgacgagga 254 |||||||| || ||| |||| |||||||||||||||| |||| |||||||| Sbjct: 1165 gaggaggaggaggacgaggaggatgacgatgatgaggacaatgaggacgagga 1217
>gb|AC115847.19| Mus musculus chromosome 5, clone RP24-245J15, complete sequence Length = 182243 Score = 42.1 bits (21), Expect = 1.9 Identities = 45/53 (84%) Strand = Plus / Plus Query: 202 gaggaggatgacgaccaggacaatgacgatgatgaggaggatgacgacgagga 254 |||||||| |||||| ||||| | || || || |||||||| ||||||||||| Sbjct: 175065 gaggaggacgacgacgaggacgaggaagaggaggaggaggacgacgacgagga 175117
>gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VI, complete sequence Length = 1813164 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 266 ccccgaagaagaggaagaagt 286 ||||||||||||||||||||| Sbjct: 676220 ccccgaagaagaggaagaagt 676200 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 232 gatgaggaggatgacgacgaggac 255 |||||||||||||| ||||||||| Sbjct: 341705 gatgaggaggatgaggacgaggac 341682
>gb|AY804110.1| Parodon sp. AMNH233323 recombination activating gene 2 (RAG2) gene, partial cds Length = 1218 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 221 acaatgacgatgatgaggaggatga 245 ||||||| ||||||||||||||||| Sbjct: 1040 acaatgaagatgatgaggaggatga 1064
>gb|AY804072.1| Exodon paradoxus voucher AMNH233426 recombination activating gene 2 (RAG2) gene, partial cds Length = 1211 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 221 acaatgacgatgatgaggaggatga 245 ||||||| ||||||||||||||||| Sbjct: 1046 acaatgaggatgatgaggaggatga 1070
>gb|AY804058.1| Cheirodontops sp. AMNH233215 recombination activating gene 2 (RAG2) gene, partial cds Length = 1222 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 221 acaatgacgatgatgaggaggatga 245 ||||||| ||||||||||||||||| Sbjct: 1044 acaatgaggatgatgaggaggatga 1068
>ref|XM_396366.2| PREDICTED: Apis mellifera similar to CG4733-PA (LOC412914), mRNA Length = 3606 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 224 atgacgatgatgaggaggatgacga 248 |||||||||| |||||||||||||| Sbjct: 85 atgacgatgaggaggaggatgacga 61
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 220 gacaatgacgatgatgaggaggatgacga 248 |||||||| ||||||||||| |||||||| Sbjct: 10934256 gacaatgaggatgatgaggatgatgacga 10934284
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 205 gaggatgacgaccaggacaatgacgatga 233 |||||||||||| | |||||||||||||| Sbjct: 657061 gaggatgacgacgatgacaatgacgatga 657089
>gb|AF305694.1|AF305694 Kaposi's sarcoma-associated herpesvirus latent nuclear antigen gene, partial cds Length = 3127 Score = 42.1 bits (21), Expect = 1.9 Identities = 45/53 (84%) Strand = Plus / Plus Query: 202 gaggaggatgacgaccaggacaatgacgatgatgaggaggatgacgacgagga 254 |||||||| || ||| |||| |||||||||||||||| |||| |||||||| Sbjct: 1240 gaggaggaggaggacgaggaggatgacgatgatgaggacaatgaggacgagga 1292
>gb|AC010920.11|AC010920 Drosophila melanogaster, chromosome X, region 14C-14D, BAC clone BACR47D09, complete sequence Length = 166935 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 224 atgacgatgatgaggaggatgacga 248 |||||||||| |||||||||||||| Sbjct: 82383 atgacgatgacgaggaggatgacga 82407
>gb|AC011069.7|AC011069 Drosophila melanogaster, chromosome X, region 12B-12C, BAC clone BACR11H20, complete sequence Length = 168384 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 235 gaggaggatgacgacgaggac 255 ||||||||||||||||||||| Sbjct: 100214 gaggaggatgacgacgaggac 100234
>ref|XM_219358.3| PREDICTED: Rattus norvegicus similar to KIAA0339 protein (predicted) (LOC309001), mRNA Length = 5582 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 226 gacgatgatgaggaggatgacgacgagga 254 |||||||||||||||||||| || ||||| Sbjct: 1310 gacgatgatgaggaggatgaggatgagga 1282
>gb|AF192756.1|AF192756 Kaposi's sarcoma-associated herpesvirus Orf73 gene, complete cds Length = 2931 Score = 42.1 bits (21), Expect = 1.9 Identities = 45/53 (84%) Strand = Plus / Plus Query: 202 gaggaggatgacgaccaggacaatgacgatgatgaggaggatgacgacgagga 254 |||||||| || ||| |||| |||||||||||||||| |||| |||||||| Sbjct: 1162 gaggaggaggaggacgaggaggatgacgatgatgaggacaatgaggacgagga 1214
>dbj|AP004047.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1191_G08 Length = 172832 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 229 gatgatgaggaggatgacgacgaggactc 257 |||||||||||||||||||| || ||||| Sbjct: 3176 gatgatgaggaggatgacgatgacgactc 3148
>dbj|AP001552.1| Oryza sativa (japonica cultivar-group) geneomic DNA, chromosome 6, PAC clone:P0029D06 Length = 150120 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 205 gaggatgacgaccaggacaatgacgatga 233 |||||||||||| | |||||||||||||| Sbjct: 63489 gaggatgacgacgatgacaatgacgatga 63517
>dbj|AP004165.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1479_B12 Length = 127089 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 229 gatgatgaggaggatgacgacgaggactc 257 |||||||||||||||||||| || ||||| Sbjct: 91918 gatgatgaggaggatgacgatgacgactc 91890
>dbj|AP005766.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0028O21 Length = 134543 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 220 gacaatgacgatgatgaggaggatgacga 248 |||||||| ||||||||||| |||||||| Sbjct: 110631 gacaatgaggatgatgaggatgatgacga 110659
>dbj|AK107036.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-B09, full insert sequence Length = 2072 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 229 gatgatgaggaggatgacgacgaggactc 257 |||||||||||||||||||| || ||||| Sbjct: 548 gatgatgaggaggatgacgatgacgactc 576
>ref|NM_211034.1| Eremothecium gossypii AFR133Cp (AFR133C), mRNA Length = 2913 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 266 ccccgaagaagaggaagaagt 286 ||||||||||||||||||||| Sbjct: 1953 ccccgaagaagaggaagaagt 1973
>ref|NM_208122.1| Eremothecium gossypii ABL178Wp (ABL178W), mRNA Length = 876 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 226 gacgatgatgaggaggatgacgacgagga 254 ||||||||||| ||||| ||||||||||| Sbjct: 427 gacgatgatgacgaggaggacgacgagga 455
>emb|AJ888457.1| Acidianus two-tailed virus, complete viral genome Length = 62730 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 224 atgacgatgatgaggaggatgacga 248 ||||||||||||||||||| ||||| Sbjct: 58506 atgacgatgatgaggaggaagacga 58530
>dbj|AK063401.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-115-A03, full insert sequence Length = 1792 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 205 gaggatgacgaccaggacaatgacgatga 233 |||||||||||| | |||||||||||||| Sbjct: 784 gaggatgacgacgatgacaatgacgatga 812
>gb|AE003484.3| Drosophila melanogaster chromosome X, section 36 of 74 of the complete sequence Length = 314111 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 227 acgatgatgaggaggatgacgacgaggac 255 ||||||| ||||||||||| ||||||||| Sbjct: 191810 acgatgaggaggaggatgaggacgaggac 191782 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 gacgatgatgaggaggatga 245 |||||||||||||||||||| Sbjct: 191841 gacgatgatgaggaggatga 191822
>gb|AE003502.4| Drosophila melanogaster chromosome X, section 54 of 74 of the complete sequence Length = 304712 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 224 atgacgatgatgaggaggatgacga 248 |||||||||| |||||||||||||| Sbjct: 101665 atgacgatgacgaggaggatgacga 101689
>gb|AE003493.3| Drosophila melanogaster chromosome X, section 45 of 74 of the complete sequence Length = 307761 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 235 gaggaggatgacgacgaggac 255 ||||||||||||||||||||| Sbjct: 214734 gaggaggatgacgacgaggac 214754
>gb|U40394.1|KSU40394 Kaposi's sarcoma-associated herpes-like virus membrane antigen p140 homolog, G-protein coupled receptor homolog, and ORF 73 unknown protein genes, complete cds Length = 8481 Score = 42.1 bits (21), Expect = 1.9 Identities = 45/53 (84%) Strand = Plus / Plus Query: 202 gaggaggatgacgaccaggacaatgacgatgatgaggaggatgacgacgagga 254 |||||||| || ||| |||| |||||||||||||||| |||| |||||||| Sbjct: 8391 gaggaggaggaggacgaggaggatgacgatgatgaggacaatgaggacgagga 8443
>gb|U75698.1|KSU75698 Kaposi's sarcoma-associated herpesvirus long unique region, 80 putative ORF's and kaposin gene, complete cds Length = 137508 Score = 42.1 bits (21), Expect = 1.9 Identities = 45/53 (84%) Strand = Plus / Minus Query: 202 gaggaggatgacgaccaggacaatgacgatgatgaggaggatgacgacgagga 254 |||||||| || ||| |||| |||||||||||||||| |||| |||||||| Sbjct: 126106 gaggaggaggaggacgaggaggatgacgatgatgaggacaatgaggacgagga 126054
>gb|U52064.1|KSU52064 Kaposi's sarcoma-associated herpes-like virus ORF73 homolog gene, complete cds Length = 3489 Score = 42.1 bits (21), Expect = 1.9 Identities = 45/53 (84%) Strand = Plus / Plus Query: 202 gaggaggatgacgaccaggacaatgacgatgatgaggaggatgacgacgagga 254 |||||||| || ||| |||| |||||||||||||||| |||| |||||||| Sbjct: 1192 gaggaggaggaggacgaggaggatgacgatgatgaggacaatgaggacgagga 1244
>gb|AC132465.3| Mus musculus BAC clone RP23-58D1 from 10, complete sequence Length = 218313 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 270 gaagaagaggaagaagtgaag 290 ||||||||||||||||||||| Sbjct: 8292 gaagaagaggaagaagtgaag 8272
>gb|AC132131.4| Mus musculus BAC clone RP23-356D16 from 10, complete sequence Length = 170192 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 270 gaagaagaggaagaagtgaag 290 ||||||||||||||||||||| Sbjct: 151804 gaagaagaggaagaagtgaag 151784
>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica Length = 3633272 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 227 acgatgatgaggaggatgacgacga 251 ||||||||||||||||||| ||||| Sbjct: 100224 acgatgatgaggaggatgaggacga 100248
>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica Length = 3066374 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 226 gacgatgatgaggaggatgacgacgagga 254 ||||||| |||||||||||| |||||||| Sbjct: 1926419 gacgatgttgaggaggatgaggacgagga 1926391
>emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB122 of Yarrowia lipolytica Length = 2303261 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 226 gacgatgatgaggaggatgacgacgagga 254 ||||| |||||||||||||| |||||||| Sbjct: 753944 gacgaagatgaggaggatgaagacgagga 753916
>gb|AE016815.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome II, complete sequence Length = 867699 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 226 gacgatgatgaggaggatgacgacgagga 254 ||||||||||| ||||| ||||||||||| Sbjct: 72055 gacgatgatgacgaggaggacgacgagga 72083
>emb|AL591826.2|CNS07EGP BAC 13C18 of library CITB 129-Sv from chromosome 10 of strain 129 of Mus musculus Length = 172715 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 224 atgacgatgatgaggaggatgacga 248 ||||||| ||||||||||||||||| Sbjct: 157949 atgacgacgatgaggaggatgacga 157925
>gb|AC116722.7| Mus musculus chromosome 3, clone RP23-257M16, complete sequence Length = 207409 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 365 aaactttcctttagagttaaaaat 388 ||||||||||||| |||||||||| Sbjct: 198629 aaactttcctttacagttaaaaat 198652
>ref|NM_180151.1| Arabidopsis thaliana unknown protein AT2G48000 mRNA, complete cds Length = 1693 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 189 agatggagtagaagaggagg 208 |||||||||||||||||||| Sbjct: 545 agatggagtagaagaggagg 526
>ref|NM_023990.1| Rattus norvegicus sine oculis homeobox homolog 3 (Drosophila) (Six3), mRNA Length = 1598 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 190 gatggagtagaagaggagga 209 |||||||||||||||||||| Sbjct: 1475 gatggagtagaagaggagga 1456
>gb|AY860223.1| Ictalurus punctatus E2A2 transcription factor mRNA, complete cds Length = 3040 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 225 tgacgatgatgaggaggatgacgacgaggact 256 |||| ||||||| ||||| ||||||||||||| Sbjct: 2018 tgacaatgatgacgaggacgacgacgaggact 2049
>gb|AF101195.1| Biomphalaria glabrata insulin-related peptide receptor mRNA, complete cds Length = 5609 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 219 ggacaatgacgatgatgaggagga 242 ||||||||| |||||||||||||| Sbjct: 4648 ggacaatgaagatgatgaggagga 4671
>gb|AC154044.2| Drosophila melanogaster clone BACR32E02, complete sequence Length = 186002 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 224 atgacgatgatgaggaggatgacgacga 251 |||| ||||||||||||||||| ||||| Sbjct: 42594 atgatgatgatgaggaggatgaggacga 42621
>ref|XM_469325.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1159 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 gaggaggatgacgacgagga 254 |||||||||||||||||||| Sbjct: 136 gaggaggatgacgacgagga 155
>gb|DQ206710.1| Anopheles albimanus calreticulin (Crt) mRNA, complete cds Length = 2282 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 228 cgatgatgaggaggatgacgacga 251 ||||||||||||||| |||||||| Sbjct: 1270 cgatgatgaggaggacgacgacga 1293
>gb|AE017347.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 7, complete sequence Length = 1347793 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 199 gaagaggaggatgacgaccaggacaatgacga 230 |||||||||||||| ||| ||||| ||||||| Sbjct: 723167 gaagaggaggatgaggacgaggacgatgacga 723136
>gb|CP000069.1| Trypanosoma brucei chromosome 6, complete sequence Length = 1618915 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 gatgaggaggatgacgacga 251 |||||||||||||||||||| Sbjct: 1229899 gatgaggaggatgacgacga 1229880
>gb|AC135562.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0087P19, complete sequence Length = 172066 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 231 tgatgaggaggatgacgacgagga 254 |||||||||||| ||||||||||| Sbjct: 169805 tgatgaggaggacgacgacgagga 169782
>gb|AC145809.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0023E20, complete sequence Length = 130827 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 gatgaggaggatgacgacga 251 |||||||||||||||||||| Sbjct: 69681 gatgaggaggatgacgacga 69700
>gb|AC139171.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0024B09, complete sequence Length = 132563 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 231 tgatgaggaggatgacgacgagga 254 |||||||||||| ||||||||||| Sbjct: 13237 tgatgaggaggacgacgacgagga 13214
>gb|AC134045.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0022E16 map C481S, complete sequence Length = 179668 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 205 gaggatgacgaccaggacaatgacgatgatga 236 ||||||||||| | ||||||||||||||||| Sbjct: 1898 gaggatgacgaagatgacaatgacgatgatga 1929
>gb|AC007863.15| Trypanosoma brucei chromosome 6 clone RPCI93-26G9, complete sequence Length = 140056 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 gatgaggaggatgacgacga 251 |||||||||||||||||||| Sbjct: 111014 gatgaggaggatgacgacga 111033
>gb|AY734459.1| Mus musculus strain ALR/Lt death-domain associated protein mRNA, partial cds Length = 1974 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 224 atgacgatgatgaggaggatgacgacga 251 ||||||||||||| || ||||||||||| Sbjct: 1065 atgacgatgatgacgatgatgacgacga 1092
>gb|AY734463.1|AY734461S3 Mus musculus strain ALS/Lt death domain-associated protein mRNA, partial cds Length = 274 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 224 atgacgatgatgaggaggatgacgacga 251 ||||||||||||| || ||||||||||| Sbjct: 79 atgacgatgatgacgatgatgacgacga 106
>gb|AY734466.1| Mus musculus strain NOD/Lt death domain-associated protein mRNA, partial cds Length = 2199 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 224 atgacgatgatgaggaggatgacgacga 251 ||||||||||||| || ||||||||||| Sbjct: 1256 atgacgatgatgacgatgatgacgacga 1283
>gb|AY734465.1| Mus musculus strain CTS/ShiLt death domain-associated protein mRNA, partial cds Length = 1949 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 224 atgacgatgatgaggaggatgacgacga 251 ||||||||||||| || ||||||||||| Sbjct: 976 atgacgatgatgacgatgatgacgacga 1003
>gb|AC010993.13| Drosophila melanogaster clone BACR27O05, complete sequence Length = 193526 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 gaggaggatgacgacgagga 254 |||||||||||||||||||| Sbjct: 46616 gaggaggatgacgacgagga 46635
>gb|AC092187.2| Drosophila melanogaster clone BACR23N06, complete sequence Length = 164920 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 gaggaggatgacgacgagga 254 |||||||||||||||||||| Sbjct: 103451 gaggaggatgacgacgagga 103432
>gb|AC092494.2| Drosophila melanogaster clone BACR23I18, complete sequence Length = 172029 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 gaggaggatgacgacgagga 254 |||||||||||||||||||| Sbjct: 26832 gaggaggatgacgacgagga 26813
>gb|AC128270.3| Rattus norvegicus 12 BAC CH230-48A22 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 236843 Score = 40.1 bits (20), Expect = 7.4 Identities = 32/36 (88%) Strand = Plus / Plus Query: 222 caatgacgatgatgaggaggatgacgacgaggactc 257 ||||||||| ||||| || ||||||||||| ||||| Sbjct: 83101 caatgacgaggatgatgacgatgacgacgacgactc 83136
>gb|AY692617.1| Saccharomyces cerevisiae clone FLH113059.01X YOR138C gene, complete cds Length = 2016 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 266 ccccgaagaagaggaagaag 285 |||||||||||||||||||| Sbjct: 1056 ccccgaagaagaggaagaag 1075
>gb|AC011251.6| Drosophila melanogaster clone BACR09F10, complete sequence Length = 173988 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 gaggaggatgacgacgagga 254 |||||||||||||||||||| Sbjct: 66944 gaggaggatgacgacgagga 66925
>ref|XM_359716.1| Magnaporthe grisea 70-15 hypothetical protein (MG05061.4) partial mRNA Length = 1821 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 231 tgatgaggaggatgacgacgagga 254 |||||| ||||||||||||||||| Sbjct: 150 tgatgacgaggatgacgacgagga 173
>ref|XM_581905.2| PREDICTED: Bos taurus similar to suppressor of Ty 6 homolog, transcript variant 1 (LOC538671), mRNA Length = 5874 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 gtagaagaggaggatgacga 215 |||||||||||||||||||| Sbjct: 245 gtagaagaggaggatgacga 264
>ref|XM_882124.1| PREDICTED: Bos taurus similar to suppressor of Ty 6 homolog, transcript variant 7 (LOC538671), mRNA Length = 5754 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 gtagaagaggaggatgacga 215 |||||||||||||||||||| Sbjct: 245 gtagaagaggaggatgacga 264
>ref|XM_868906.1| PREDICTED: Bos taurus similar to suppressor of Ty 6 homolog, transcript variant 2 (LOC538671), mRNA Length = 5928 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 gtagaagaggaggatgacga 215 |||||||||||||||||||| Sbjct: 245 gtagaagaggaggatgacga 264
>ref|XM_608073.2| PREDICTED: Bos taurus hypothetical LOC529621 (LOC529621), mRNA Length = 1356 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 264 gcccccgaagaagaggaagaagtg 287 |||||| ||||||||||||||||| Sbjct: 840 gccccctaagaagaggaagaagtg 863
>gb|AC147962.1| Oryza sativa chromosome 3 BAC OSJNBa0083K01 genomic sequence, complete sequence Length = 167239 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 gaggagcaggagggtggagg 104 |||||||||||||||||||| Sbjct: 154281 gaggagcaggagggtggagg 154300
>gb|BC056148.1| Homo sapiens nuclear receptor subfamily 1, group D, member 1, mRNA (cDNA clone MGC:64943 IMAGE:6195844), complete cds Length = 2671 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 gaggaggatgacgacgagga 254 |||||||||||||||||||| Sbjct: 797 gaggaggatgacgacgagga 778
>ref|XM_322805.1| Neurospora crassa OR74A hypothetical protein (NCU03548.1) partial mRNA Length = 1797 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 gaggaggatgacgacgagga 254 |||||||||||||||||||| Sbjct: 1711 gaggaggatgacgacgagga 1730
>ref|XM_950679.1| Neurospora crassa OR74A hypothetical protein (NCU03548.1) partial mRNA Length = 1797 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 gaggaggatgacgacgagga 254 |||||||||||||||||||| Sbjct: 1711 gaggaggatgacgacgagga 1730
>ref|XM_711822.1| Candida albicans SC5314 putative Sit4 phosphatase complex component (CaO19_12627), mRNA Length = 2586 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 224 atgacgatgatgaggaggatgacgacga 251 ||||||||||||| || ||||||||||| Sbjct: 443 atgacgatgatgaagacgatgacgacga 470
>ref|NM_007829.2| Mus musculus Fas death domain-associated protein (Daxx), mRNA Length = 2674 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 224 atgacgatgatgaggaggatgacgacga 251 ||||||||||||| || ||||||||||| Sbjct: 1599 atgacgatgatgacgatgatgacgacga 1626
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 gaggaggatgacgacgagga 254 |||||||||||||||||||| Sbjct: 26982498 gaggaggatgacgacgagga 26982479 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 229 gatgatgaggaggatgacgacgag 252 |||||||||||||| ||||||||| Sbjct: 23541978 gatgatgaggaggaagacgacgag 23542001 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 gaggagcaggagggtggagg 104 |||||||||||||||||||| Sbjct: 20930997 gaggagcaggagggtggagg 20930978 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 gaggaggatgacgacgagga 254 |||||||||||||||||||| Sbjct: 8163006 gaggaggatgacgacgagga 8163025
>gb|AC158521.2| Mus musculus BAC clone RP23-404M10 from chromosome 14, complete sequence Length = 205501 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 gaagaggaggatgacgacca 218 |||||||||||||||||||| Sbjct: 83907 gaagaggaggatgacgacca 83926
>gb|DQ017439.1| Drosophila melanogaster strain Russian 2b CG10692 gene, promoter region and partial cds Length = 1653 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 224 atgacgatgatgaggaggatgacgacga 251 ||||||| ||||||||||||||||||| Sbjct: 1150 atgacgacaatgaggaggatgacgacga 1123
>gb|AC110262.12| Mus musculus chromosome 17, clone RP23-291L10, complete sequence Length = 210850 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 224 atgacgatgatgaggaggatgacgacga 251 |||| |||||||||||||| |||||||| Sbjct: 119658 atgatgatgatgaggaggaggacgacga 119685 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 224 atgacgatgatgaggaggatgacgacga 251 |||| |||||||||||||| |||||||| Sbjct: 101605 atgatgatgatgaggaggaggacgacga 101632
>gb|AC125291.3| Drosophila melanogaster X BAC CH221-17A11 (CHORI Sheared BAC Drosophila melanogaster library) complete sequence Length = 166613 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 227 acgatgatgaggaggatgacgacgagga 254 |||| ||||| ||||||||||||||||| Sbjct: 150441 acgacgatgacgaggatgacgacgagga 150468
>gb|AC004884.1| Homo sapiens PAC clone RP4-778K6 from 7, complete sequence Length = 138244 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 224 atgacgatgatgaggaggatgacgacga 251 |||| ||||||||||| ||||||||||| Sbjct: 24587 atgatgatgatgaggatgatgacgacga 24560 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,615,266 Number of Sequences: 3902068 Number of extensions: 4615266 Number of successful extensions: 151763 Number of sequences better than 10.0: 434 Number of HSP's better than 10.0 without gapping: 452 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 147973 Number of HSP's gapped (non-prelim): 3739 length of query: 544 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 521 effective length of database: 17,143,297,704 effective search space: 8931658103784 effective search space used: 8931658103784 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)