Clone Information

BLAST Search Result

Clone Name	bags12i24
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	RHM1_ARATH (Q9SYM5) Probable rhamnose biosynthetic enzyme 1 (EC ...	249	4e-66
2	RHM2_ARATH (Q9LPG6) Probable rhamnose biosynthetic enzyme 2 (EC ...	243	3e-64
3	RHM3_ARATH (Q9LH76) Probable rhamnose biosynthetic enzyme 3 (EC ...	239	5e-63
4	TGDS_MOUSE (Q8VDR7) dTDP-D-glucose 4,6-dehydratase (EC 4.2.1.46)	76	6e-14
5	TGDS_HUMAN (O95455) dTDP-D-glucose 4,6-dehydratase (EC 4.2.1.46)	72	1e-12
6	RFFG_ECOLI (P27830) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	63	6e-10
7	RFBB_NEIMB (P55294) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	60	3e-09
8	RFBB1_ECOLI (P37759) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	60	5e-09
9	RFBB_XANCP (P55295) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	58	2e-08
10	RFBB_SHIFL (P37777) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	58	2e-08
11	RFBB2_ECOLI (P55293) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	58	2e-08
12	SPSJ_BACSU (P39630) Spore coat polysaccharide biosynthesis prote...	58	2e-08
13	RFBB_SALTY (P26391) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	57	4e-08
14	RFBB_NEIMA (Q9S642) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	56	8e-08
15	RFBB_RHISN (P55462) Probable dTDP-glucose 4,6-dehydratase (EC 4....	55	1e-07
16	RFBB_NEIGO (P37761) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	55	2e-07
17	RFFG_HAEIN (P44914) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	49	1e-05
18	ACBB_ACTS5 (Q9ZAE8) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	44	2e-04
19	RMLB_STRMU (P95780) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	40	0.004
20	STRE_STRGR (P29782) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	40	0.004
21	Y4AF_RHISN (P55353) Hypothetical 34.7 kDa protein y4aF	37	0.050
22	Y988_STRP8 (P67276) UPF0135 protein spyM18_0988	35	0.19
23	Y931_STRP1 (P67274) UPF0135 protein SPy0931/M5005_Spy0732	35	0.19
24	Y758_STRP6 (Q5XCH0) UPF0135 protein M6_Spy0758	35	0.19
25	Y644_STRP3 (P67275) UPF0135 protein SpyM3_0644/SPs1208	35	0.19
26	GALE_METJA (Q57664) Putative UDP-glucose 4-epimerase (EC 5.1.3.2...	32	0.94
27	SO1A6_RAT (Q9QYE2) Solute carrier organic anion transporter fami...	32	0.94
28	FCL2_ARATH (Q9LMU0) Putative GDP-L-fucose synthase 2 (EC 1.1.1.2...	32	0.94
29	FCL1_ORYSA (Q67WR2) Probable GDP-L-fucose synthase 1 (EC 1.1.1.2...	32	0.94
30	FCL1_ARATH (O49213) GDP-L-fucose synthase 1 (EC 1.1.1.271) (GDP-...	32	1.2
31	UXS1_PONPY (Q5R885) UDP-glucuronic acid decarboxylase 1 (EC 4.1....	32	1.6
32	NH103_CAEEL (O16359) Nuclear hormone receptor family member nhr-103	30	3.6
33	ARAE3_ARATH (Q9SUN3) Putative UDP-arabinose 4-epimerase 3 (EC 5....	30	4.6
34	GALE_PASHA (Q59678) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galact...	30	4.6
35	TREA_DROME (Q9W2M2) Trehalase precursor (EC 3.2.1.28) (Alpha,alp...	30	6.1
36	UXS1_RAT (Q5PQX0) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1....	30	6.1
37	UXS1_MOUSE (Q91XL3) UDP-glucuronic acid decarboxylase 1 (EC 4.1....	30	6.1
38	UXS1_HUMAN (Q8NBZ7) UDP-glucuronic acid decarboxylase 1 (EC 4.1....	30	6.1
39	TUSA_PSEHT (Q3IJ25) Sulfurtransferase tusA homolog (EC 2.8.1.-)	30	6.1
40	UXS1_BRARE (Q6GMI9) UDP-glucuronic acid decarboxylase 1 (EC 4.1....	30	6.1
41	SYE_BORBU (O51345) Glutamyl-tRNA synthetase (EC 6.1.1.17) (Gluta...	29	7.9
42	GALE_PASMU (Q9CNY5) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galact...	29	7.9

>RHM1_ARATH (Q9SYM5) Probable rhamnose biosynthetic enzyme 1 (EC 4.2.1.-) (EC|
           1.1.1.-)
          Length = 669

 Score =  249 bits (636), Expect = 4e-66
 Identities = 125/183 (68%), Positives = 141/183 (77%)
 Frame = +3

Query: 12  EVGHVYNIGTVKERRVIDVASDICKLFGLDTEKVIRFVENRPFNDQWYFLDDQKLKKLG* 191
           EVGHVYNIGT KERRV DVA DICKLF +D E  I+FV+NRPFNDQ YFLDDQKLKKLG 
Sbjct: 243 EVGHVYNIGTKKERRVNDVAKDICKLFNMDPEANIKFVDNRPFNDQRYFLDDQKLKKLGW 302

Query: 192 AERTTWEEGLKKTIEWYTSNPEYWGDVAGALLPHPRMLMTPGVERHNWTEEIKSLASSPA 371
           +ERTTWEEGLKKT++WYT NPE+WGDV+GALLPHPRMLM PG  RH    E  SLA++ +
Sbjct: 303 SERTTWEEGLKKTMDWYTQNPEWWGDVSGALLPHPRMLMMPG-GRHFDGSEDNSLAATLS 361

Query: 372 EAKECXXXXXXXXXXXXXXXPQKATYKFLIYGKTGWIGGLLGKICEKQSIPYEYGKGRLQ 551
           E  +                PQK + KFLIYGKTGWIGGLLGKIC+KQ I YEYGKGRL+
Sbjct: 362 E--KPSQTHMVVPSQRSNGTPQKPSLKFLIYGKTGWIGGLLGKICDKQGIAYEYGKGRLE 419

Query: 552 ERS 560
           +RS
Sbjct: 420 DRS 422

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>RHM2_ARATH (Q9LPG6) Probable rhamnose biosynthetic enzyme 2 (EC 4.2.1.-) (EC|
           1.1.1.-) (RHAMNOSE BIOSYNTHESIS 2 protein) (NDP-rhamnose
           synthase) (MUCILAGE-MODIFIED4 protein) (UDP-L-rhamnose
           synthase MUM4)
          Length = 667

 Score =  243 bits (619), Expect = 3e-64
 Identities = 116/183 (63%), Positives = 137/183 (74%)
 Frame = +3

Query: 12  EVGHVYNIGTVKERRVIDVASDICKLFGLDTEKVIRFVENRPFNDQWYFLDDQKLKKLG* 191
           E+GHVYN+GT +ERRVIDVA DICKLFG D E  I+FVENRPFNDQ YFLDDQKLKKLG 
Sbjct: 245 EIGHVYNVGTKRERRVIDVARDICKLFGKDPESSIQFVENRPFNDQRYFLDDQKLKKLGW 304

Query: 192 AERTTWEEGLKKTIEWYTSNPEYWGDVAGALLPHPRMLMTPGVERHNWTEEIKSLASSPA 371
            ERT WE+GLKKT++WYT NPE+WGDV+GALLPHPRMLM PG    + + E K ++S+  
Sbjct: 305 QERTNWEDGLKKTMDWYTQNPEWWGDVSGALLPHPRMLMMPGGRLSDGSSEKKDVSSNTV 364

Query: 372 EAKECXXXXXXXXXXXXXXXPQKATYKFLIYGKTGWIGGLLGKICEKQSIPYEYGKGRLQ 551
           +                     KA+ KFLIYGKTGW+GGLLGK+CEKQ I YEYGKGRL+
Sbjct: 365 Q-------TFTVVTPKNGDSGDKASLKFLIYGKTGWLGGLLGKLCEKQGITYEYGKGRLE 417

Query: 552 ERS 560
           +R+
Sbjct: 418 DRA 420

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>RHM3_ARATH (Q9LH76) Probable rhamnose biosynthetic enzyme 3 (EC 4.2.1.-) (EC|
           1.1.1.-)
          Length = 664

 Score =  239 bits (609), Expect = 5e-63
 Identities = 114/183 (62%), Positives = 135/183 (73%)
 Frame = +3

Query: 12  EVGHVYNIGTVKERRVIDVASDICKLFGLDTEKVIRFVENRPFNDQWYFLDDQKLKKLG* 191
           EV HVYNIGT +ERRVIDVA+DI KLFG+D +  I++VENRPFNDQ YFLDDQKLKKLG 
Sbjct: 243 EVNHVYNIGTTRERRVIDVANDISKLFGIDPDSTIQYVENRPFNDQRYFLDDQKLKKLGW 302

Query: 192 AERTTWEEGLKKTIEWYTSNPEYWGDVAGALLPHPRMLMTPGVERHNWTEEIKSLASSPA 371
            ERT WEEGL+KT+EWYT NPE+WGDV+GALLPHPRMLM PG    + ++E K+   +  
Sbjct: 303 CERTNWEEGLRKTMEWYTENPEWWGDVSGALLPHPRMLMMPGDRHSDGSDEHKNADGN-- 360

Query: 372 EAKECXXXXXXXXXXXXXXXPQKATYKFLIYGKTGWIGGLLGKICEKQSIPYEYGKGRLQ 551
                                 K + KFLIYGKTGW+GGLLGK+CEKQ IPYEYGKGRL+
Sbjct: 361 ------QTFTVVTPTKAGCSGDKRSLKFLIYGKTGWLGGLLGKLCEKQGIPYEYGKGRLE 414

Query: 552 ERS 560
           +R+
Sbjct: 415 DRA 417

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>TGDS_MOUSE (Q8VDR7) dTDP-D-glucose 4,6-dehydratase (EC 4.2.1.46)|
          Length = 355

 Score = 76.3 bits (186), Expect = 6e-14
 Identities = 38/100 (38%), Positives = 55/100 (55%), Gaps = 5/100 (5%)
 Frame = +3

Query: 12  EVGHVYNIGTVKERRVIDVASDICKLFG-----LDTEKVIRFVENRPFNDQWYFLDDQKL 176
           E G +YNIGT  E  V+ +A ++ +L        +TE  + +V +RP ND  Y +  +K+
Sbjct: 250 EPGEIYNIGTNFEMSVVQLAKELIQLIKETNSESETESWVDYVSDRPHNDMRYPMKSEKI 309

Query: 177 KKLG*AERTTWEEGLKKTIEWYTSNPEYWGDVAGALLPHP 296
             LG   +  WEEG+KKT+EWY  N   W +   AL P P
Sbjct: 310 HSLGWKPKVPWEEGIKKTVEWYRKNFHNWKNAEKALEPFP 349

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>TGDS_HUMAN (O95455) dTDP-D-glucose 4,6-dehydratase (EC 4.2.1.46)|
          Length = 350

 Score = 72.0 bits (175), Expect = 1e-12
 Identities = 37/98 (37%), Positives = 54/98 (55%), Gaps = 5/98 (5%)
 Frame = +3

Query: 18  GHVYNIGTVKERRVIDVASDICKLFG-----LDTEKVIRFVENRPFNDQWYFLDDQKLKK 182
           G +YNIGT  E  V+ +A ++ +L        + E  + +V +RP ND  Y +  +K+  
Sbjct: 252 GEIYNIGTNFEMSVVQLAKELIQLIKETNSESEMENWVDYVNDRPTNDMRYPMKSEKIHG 311

Query: 183 LG*AERTTWEEGLKKTIEWYTSNPEYWGDVAGALLPHP 296
           LG   +  W+EG+KKTIEWY  N   W +V  AL P P
Sbjct: 312 LGWRPKVPWKEGIKKTIEWYRENFHNWKNVEKALEPFP 349

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>RFFG_ECOLI (P27830) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)|
          Length = 355

 Score = 62.8 bits (151), Expect = 6e-10
 Identities = 34/98 (34%), Positives = 53/98 (54%), Gaps = 11/98 (11%)
 Frame = +3

Query: 12  EVGHVYNIGTVKERRVIDVASDICKLFG----------LDTEKVIRFVENRPFNDQWYFL 161
           +VG  YNIG   ER+ +DV   IC+L                 +I FV +RP +D  Y +
Sbjct: 244 KVGETYNIGGHNERKNLDVVETICELLEELAPNKPHGVAHYRDLITFVADRPGHDLRYAI 303

Query: 162 DDQKL-KKLG*AERTTWEEGLKKTIEWYTSNPEYWGDV 272
           D  K+ ++LG   + T+E G++KT++WY +N  +W  V
Sbjct: 304 DASKIARELGWLPQETFESGMRKTVQWYLANESWWKQV 341

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>RFBB_NEIMB (P55294) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)|
          Length = 355

 Score = 60.5 bits (145), Expect = 3e-09
 Identities = 37/97 (38%), Positives = 53/97 (54%), Gaps = 11/97 (11%)
 Frame = +3

Query: 15  VGHVYNIGTVKERRVIDVASDICKLFG-LDTEK---------VIRFVENRPFNDQWYFLD 164
           VG  YNIG   E+  I+V   IC L   L  EK         +I FV++RP +D  Y +D
Sbjct: 245 VGETYNIGGHNEKANIEVVKTICALLEELAPEKPAGVARYEDLITFVQDRPGHDVRYAVD 304

Query: 165 DQKLKK-LG*AERTTWEEGLKKTIEWYTSNPEYWGDV 272
             K+++ LG     T+E GL+KT++WY  N  +W +V
Sbjct: 305 AAKIRRDLGWLPLETFESGLRKTVQWYLDNKTWWQNV 341

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>RFBB1_ECOLI (P37759) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)|
          Length = 361

 Score = 59.7 bits (143), Expect = 5e-09
 Identities = 35/94 (37%), Positives = 55/94 (58%), Gaps = 7/94 (7%)
 Frame = +3

Query: 12  EVGHVYNIGTVKERRVIDVASDICKLFG--LDTEKVIR----FVENRPFNDQWYFLDDQK 173
           + G  YNIG   E++ IDV   IC L    +  EK  R    +V +RP +D+ Y +D +K
Sbjct: 251 KAGETYNIGGHNEKKNIDVVLTICDLLDEIVPKEKSYREQITYVADRPGHDRRYAIDAEK 310

Query: 174 L-KKLG*AERTTWEEGLKKTIEWYTSNPEYWGDV 272
           + + LG   + T+E G++KT+EWY SN ++  +V
Sbjct: 311 IGRALGWKPQETFESGIRKTVEWYLSNTKWVDNV 344

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>RFBB_XANCP (P55295) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)|
          Length = 351

 Score = 58.2 bits (139), Expect = 2e-08
 Identities = 33/88 (37%), Positives = 49/88 (55%), Gaps = 9/88 (10%)
 Frame = +3

Query: 15  VGHVYNIGTVKERRVIDVASDICKLF--------GLDTEKVIRFVENRPFNDQWYFLDDQ 170
           VG  YN+G   ER+ I+V   IC L         G   E  I +V +RP +D+ Y +D  
Sbjct: 243 VGETYNVGGNSERQNIEVVQAICALLDQHRPREDGKPRESQIAYVTDRPGHDRRYAIDAS 302

Query: 171 KLK-KLG*AERTTWEEGLKKTIEWYTSN 251
           KLK +LG     T+E+G+ +T++WY +N
Sbjct: 303 KLKDELGWEPAYTFEQGIAQTVDWYLTN 330

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>RFBB_SHIFL (P37777) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)|
          Length = 361

 Score = 57.8 bits (138), Expect = 2e-08
 Identities = 33/90 (36%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
 Frame = +3

Query: 12  EVGHVYNIGTVKERRVIDVASDICKLFG--LDTEKVIR----FVENRPFNDQWYFLDDQK 173
           + G  YNIG   E++ IDV   IC L    +  EK  R    +V +RP +D+ Y +D  K
Sbjct: 251 KAGETYNIGGHNEKKNIDVVLTICDLLDEIVPKEKSYREQITYVADRPGHDRRYAIDADK 310

Query: 174 L-KKLG*AERTTWEEGLKKTIEWYTSNPEY 260
           + ++LG   + T+E G++KT+EWY +N  +
Sbjct: 311 ISRELGWKPQETFESGIRKTVEWYLANTNW 340

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>RFBB2_ECOLI (P55293) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)|
          Length = 361

 Score = 57.8 bits (138), Expect = 2e-08
 Identities = 33/90 (36%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
 Frame = +3

Query: 12  EVGHVYNIGTVKERRVIDVASDICKLFG--LDTEKVIR----FVENRPFNDQWYFLDDQK 173
           + G  YNIG   E++ IDV   IC L    +  EK  R    +V +RP +D+ Y +D  K
Sbjct: 251 KAGETYNIGGHNEKKNIDVVFTICDLLDEIVPKEKSYREQITYVADRPGHDRRYAIDADK 310

Query: 174 L-KKLG*AERTTWEEGLKKTIEWYTSNPEY 260
           + ++LG   + T+E G++KT+EWY +N  +
Sbjct: 311 ISRELGWKPQETFESGIRKTVEWYLANTNW 340

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>SPSJ_BACSU (P39630) Spore coat polysaccharide biosynthesis protein spsJ|
          Length = 315

 Score = 57.8 bits (138), Expect = 2e-08
 Identities = 34/79 (43%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
 Frame = +3

Query: 18  GHVYNIGTVKERRVIDVASDICKLFGLDTEKVIRFVENRPFNDQWYFLDDQKLK-KLG*A 194
           G VYNIG   ER   ++AS I K  G   E++   VE+R  +D+ Y ++  KLK +LG  
Sbjct: 237 GEVYNIGGGNERTNKELASVILKHLGC--EELFAHVEDRKGHDRRYAINASKLKNELGWR 294

Query: 195 ERTTWEEGLKKTIEWYTSN 251
           +  T+EEG+ +TI+WYT N
Sbjct: 295 QEVTFEEGIARTIQWYTDN 313

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>RFBB_SALTY (P26391) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)|
          Length = 361

 Score = 57.0 bits (136), Expect = 4e-08
 Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 7/94 (7%)
 Frame = +3

Query: 12  EVGHVYNIGTVKERRVIDVASDICKLFGLDTEKV------IRFVENRPFNDQWYFLDDQK 173
           + G  YNIG   E++ +DV   IC L      K       I +V +RP +D+ Y +D  K
Sbjct: 251 KAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGHDRRYAIDAGK 310

Query: 174 L-KKLG*AERTTWEEGLKKTIEWYTSNPEYWGDV 272
           + ++LG     T+E G++KT+EWY +N ++  +V
Sbjct: 311 ISRELGWKPLETFESGIRKTVEWYLANTQWVNNV 344

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>RFBB_NEIMA (Q9S642) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)|
          Length = 341

 Score = 55.8 bits (133), Expect = 8e-08
 Identities = 35/90 (38%), Positives = 49/90 (54%), Gaps = 11/90 (12%)
 Frame = +3

Query: 15  VGHVYNIGTVKERRVIDVASDICKLFG-LDTEK---------VIRFVENRPFNDQWYFLD 164
           VG  YNIG   E+  I+V   IC L   L  EK         +I FV++RP +D  Y +D
Sbjct: 245 VGETYNIGGHNEKANIEVVKTICALLEELAPEKPAGVARYEDLITFVQDRPGHDARYAVD 304

Query: 165 DQKLKK-LG*AERTTWEEGLKKTIEWYTSN 251
             K+++ LG     T+E GL+KT++WY  N
Sbjct: 305 TAKIRRDLGWQPLETFESGLRKTVQWYLDN 334

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>RFBB_RHISN (P55462) Probable dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)|
          Length = 350

 Score = 55.1 bits (131), Expect = 1e-07
 Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 7/89 (7%)
 Frame = +3

Query: 18  GHVYNIGTVKERRVIDVASDICKLFGLDTEK------VIRFVENRPFNDQWYFLDDQKLK 179
           G  YN+G   E R IDV + IC L    +        +I FV++RP +D  Y +D  KL+
Sbjct: 243 GEKYNVGGRNELRNIDVVNRICLLLDELSPNASHYGDLITFVKDRPGHDARYAIDATKLE 302

Query: 180 -KLG*AERTTWEEGLKKTIEWYTSNPEYW 263
            +LG   +  ++ G++KT+EWY  N  +W
Sbjct: 303 TELGWKAQENFDTGIRKTVEWYLENGWWW 331

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>RFBB_NEIGO (P37761) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)|
          Length = 346

 Score = 54.7 bits (130), Expect = 2e-07
 Identities = 34/90 (37%), Positives = 49/90 (54%), Gaps = 11/90 (12%)
 Frame = +3

Query: 15  VGHVYNIGTVKERRVIDVASDICKLFG-LDTEK---------VIRFVENRPFNDQWYFLD 164
           VG  YNIG   E+  ++V   IC L   L  EK         +I FV++RP +D  Y +D
Sbjct: 250 VGETYNIGGHNEKTNLEVVKTICALLEELAPEKPAGVARYEDLITFVQDRPGHDARYAVD 309

Query: 165 DQKLKK-LG*AERTTWEEGLKKTIEWYTSN 251
             K+++ LG     T+E GL+KT++WY  N
Sbjct: 310 AAKIRRDLGWLPLETFESGLRKTVQWYLDN 339

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>RFFG_HAEIN (P44914) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)|
          Length = 338

 Score = 48.5 bits (114), Expect = 1e-05
 Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 11/90 (12%)
 Frame = +3

Query: 15  VGHVYNIGTVKERRVIDVASDICKLFGLDT----------EKVIRFVENRPFNDQWYFLD 164
           VG  YNIG   E+  ++V   IC+L               E ++ FV++RP +D  Y LD
Sbjct: 245 VGENYNIGGNCEKTNLEVVKRICQLLEELAPSKPNHIKYYEDLMTFVKDRPGHDVRYSLD 304

Query: 165 DQKLK-KLG*AERTTWEEGLKKTIEWYTSN 251
             K+  +LG   + T+E+GL++T++WY  N
Sbjct: 305 CSKIHAELGWQPQITFEQGLRQTVKWYLFN 334

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>ACBB_ACTS5 (Q9ZAE8) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)|
          Length = 341

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
 Frame = +3

Query: 18  GHVYNIGTVKERRVIDVASDICKLFGLDTEKVIRFVENRPFNDQWYFLDDQKLK-KLG*A 194
           G VY+IG   E   +++   + +  G    + I FV +R  +D+ Y LD  K+  +LG  
Sbjct: 238 GEVYHIGGGWEATNLELTEILLEACGARRSR-ISFVTDRKGHDRRYSLDYSKIAGELGYR 296

Query: 195 ERTTWEEGLKKTIEWYTSNPEYWGD 269
            R  + +G+ +T+ WY +N  +W D
Sbjct: 297 PRVDFTDGIAETVAWYRANRSWWTD 321

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>RMLB_STRMU (P95780) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)|
          Length = 348

 Score = 40.0 bits (92), Expect = 0.004
 Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
 Frame = +3

Query: 15  VGHVYNIGTVKERRVIDVASDICKLFGLDTEKVIRFVENRPFNDQWYFLDDQKLKK-LG* 191
           +G  Y IG   E+   +V   I +      +     V +R  +D  Y +D  KL++ LG 
Sbjct: 246 IGETYLIGADGEKNNKEVLELILEKMS-QPKNAYDHVTDRAGHDLRYAIDSTKLREELGW 304

Query: 192 AER-TTWEEGLKKTIEWYTSNPEYW 263
             + T +EEGL+ TI+WYT + ++W
Sbjct: 305 KPQFTNFEEGLEDTIKWYTEHEDWW 329

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>STRE_STRGR (P29782) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)|
          Length = 328

 Score = 40.0 bits (92), Expect = 0.004
 Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 4/90 (4%)
 Frame = +3

Query: 6   REEVGHVYNIG---TVKERRVIDVASDICKLFGLDTEKVIRFVENRPFNDQWYFLDDQKL 176
           R   G VYNIG   T+  + ++ +   + +  G D   V  +VE+R  +D+ Y +D  ++
Sbjct: 232 RGRAGRVYNIGGGATLSNKELVGL---LLEAAGADWGSV-EYVEDRKGHDRRYAVDSTRI 287

Query: 177 KK-LG*AERTTWEEGLKKTIEWYTSNPEYW 263
           ++ LG A      +GL  T+ WY  +  +W
Sbjct: 288 QRELGFAPAVDLADGLAATVAWYHKHRSWW 317

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>Y4AF_RHISN (P55353) Hypothetical 34.7 kDa protein y4aF|
          Length = 314

 Score = 36.6 bits (83), Expect = 0.050
 Identities = 24/80 (30%), Positives = 42/80 (52%)
 Frame = +3

Query: 12  EVGHVYNIGTVKERRVIDVASDICKLFGLDTEKVIRFVENRPFNDQWYFLDDQKLKKLG* 191
           E  H+ NIG+  E  +I++A  +C++ G   +  I F  ++P       L  ++L  +G 
Sbjct: 234 ETEHI-NIGSGGEISIIELAHIVCRVVGFKGD--IVFDTSKPDGTPRKLLSSERLVSMGW 290

Query: 192 AERTTWEEGLKKTIEWYTSN 251
             +T+ E GL K+ E + SN
Sbjct: 291 RPKTSLELGLAKSYESFVSN 310

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>Y988_STRP8 (P67276) UPF0135 protein spyM18_0988|
          Length = 262

 Score = 34.7 bits (78), Expect = 0.19
 Identities = 15/35 (42%), Positives = 26/35 (74%)
 Frame = +3

Query: 33  IGTVKERRVIDVASDICKLFGLDTEKVIRFVENRP 137
           IGTVKE+ + ++AS + ++F LDT ++IR+ +  P
Sbjct: 136 IGTVKEQALEELASKVKRVFDLDTVRLIRYDKENP 170

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>Y931_STRP1 (P67274) UPF0135 protein SPy0931/M5005_Spy0732|
          Length = 262

 Score = 34.7 bits (78), Expect = 0.19
 Identities = 15/35 (42%), Positives = 26/35 (74%)
 Frame = +3

Query: 33  IGTVKERRVIDVASDICKLFGLDTEKVIRFVENRP 137
           IGTVKE+ + ++AS + ++F LDT ++IR+ +  P
Sbjct: 136 IGTVKEQALEELASKVKRVFDLDTVRLIRYDKENP 170

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>Y758_STRP6 (Q5XCH0) UPF0135 protein M6_Spy0758|
          Length = 262

 Score = 34.7 bits (78), Expect = 0.19
 Identities = 15/35 (42%), Positives = 26/35 (74%)
 Frame = +3

Query: 33  IGTVKERRVIDVASDICKLFGLDTEKVIRFVENRP 137
           IGTVKE+ + ++AS + ++F LDT ++IR+ +  P
Sbjct: 136 IGTVKEQALEELASKVKRVFDLDTVRLIRYDKENP 170

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>Y644_STRP3 (P67275) UPF0135 protein SpyM3_0644/SPs1208|
          Length = 262

 Score = 34.7 bits (78), Expect = 0.19
 Identities = 15/35 (42%), Positives = 26/35 (74%)
 Frame = +3

Query: 33  IGTVKERRVIDVASDICKLFGLDTEKVIRFVENRP 137
           IGTVKE+ + ++AS + ++F LDT ++IR+ +  P
Sbjct: 136 IGTVKEQALEELASKVKRVFDLDTVRLIRYDKENP 170

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>GALE_METJA (Q57664) Putative UDP-glucose 4-epimerase (EC 5.1.3.2)|
           (Galactowaldenase) (UDP-galactose 4-epimerase)
          Length = 305

 Score = 32.3 bits (72), Expect = 0.94
 Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
 Frame = +3

Query: 24  VYNIGTVKERRVIDVASDICKLFGLDTEKVIRFVENRPFNDQWY--FLDDQKLKKLG*AE 197
           + NIGT KE  V ++   I    G   E +     ++P   + Y  +LD +K + LG   
Sbjct: 229 IVNIGTGKETSVNELFDIIKHEIGFRGEAIY----DKPREGEVYRIYLDIKKAESLGWKP 284

Query: 198 RTTWEEGLKKTIEWYTSN 251
               +EG+K+ + W  +N
Sbjct: 285 EIDLKEGIKRVVNWMKNN 302

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>SO1A6_RAT (Q9QYE2) Solute carrier organic anion transporter family member 1A6|
           (Solute carrier family 21 member 13) (Kidney-specific
           organic anion-transporting polypeptide 5) (OATP-5)
          Length = 670

 Score = 32.3 bits (72), Expect = 0.94
 Identities = 28/95 (29%), Positives = 42/95 (44%), Gaps = 12/95 (12%)
 Frame = -1

Query: 441 PSEGHCWCYWKWLQQLLCY-------IPWLQLAKKQEI*FPQSSYAFQLQASSTSLDEGA 283
           P++  C   W W+  L+C        IP+    K     FP+     +  A+ T  DEG 
Sbjct: 236 PTDTRCVGAW-WIGFLVCAGLNILISIPFFFFPKT----FPKEGP--EDMANETKNDEGD 288

Query: 282 MHRQH-----RPSTQDYLCTIQLFSSNPLPMLCAL 193
            HR+      R  T+D+   ++  S NP+ MLC L
Sbjct: 289 KHREKAKEEKRGITKDFFLFMKSLSCNPIYMLCVL 323

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>FCL2_ARATH (Q9LMU0) Putative GDP-L-fucose synthase 2 (EC 1.1.1.271)|
           (GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4-reductase
           2) (AtGER2)
          Length = 328

 Score = 32.3 bits (72), Expect = 0.94
 Identities = 19/74 (25%), Positives = 36/74 (48%)
 Frame = +3

Query: 30  NIGTVKERRVIDVASDICKLFGLDTEKVIRFVENRPFNDQWYFLDDQKLKKLG*AERTTW 209
           N+G+  E  + ++A  + ++ G   + V  +   +P       +D  KL  LG   + + 
Sbjct: 251 NVGSGVEVTIKELAELVKEVVGFKGKLV--WDTTKPDGTPRKLMDSSKLASLGWTPKISL 308

Query: 210 EEGLKKTIEWYTSN 251
           ++GL +T EWY  N
Sbjct: 309 KDGLSQTYEWYLEN 322

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>FCL1_ORYSA (Q67WR2) Probable GDP-L-fucose synthase 1 (EC 1.1.1.271)|
           (GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4-reductase
           1)
          Length = 328

 Score = 32.3 bits (72), Expect = 0.94
 Identities = 17/74 (22%), Positives = 38/74 (51%)
 Frame = +3

Query: 30  NIGTVKERRVIDVASDICKLFGLDTEKVIRFVENRPFNDQWYFLDDQKLKKLG*AERTTW 209
           N+G+  E  + ++A  + ++ G   + V  +  ++P       +D  K++++G   +   
Sbjct: 251 NVGSGSEVTIKELAELVKEVVGFQGKLV--WDSSKPDGTPRKLMDSSKIQEMGWKPKVPL 308

Query: 210 EEGLKKTIEWYTSN 251
           +EGL +T +WY  N
Sbjct: 309 KEGLVETYKWYVEN 322

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>FCL1_ARATH (O49213) GDP-L-fucose synthase 1 (EC 1.1.1.271)|
           (GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4-reductase
           1) (AtGER1) (AtFX)
          Length = 312

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 18/74 (24%), Positives = 37/74 (50%)
 Frame = +3

Query: 30  NIGTVKERRVIDVASDICKLFGLDTEKVIRFVENRPFNDQWYFLDDQKLKKLG*AERTTW 209
           NIG+ +E  + ++A  + ++ G + +  + +   +P       +D  KL  LG   + + 
Sbjct: 237 NIGSGQEVTIRELAELVKEVVGFEGK--LGWDCTKPDGTPRKLMDSSKLASLGWTPKVSL 294

Query: 210 EEGLKKTIEWYTSN 251
            +GL +T +WY  N
Sbjct: 295 RDGLSQTYDWYLKN 308

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>UXS1_PONPY (Q5R885) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)|
           (UDP-glucuronate decarboxylase 1) (UGD) (UXS-1)
          Length = 420

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 30/103 (29%), Positives = 46/103 (44%), Gaps = 2/103 (1%)
 Frame = +3

Query: 30  NIGTVKERRVIDVASDICKLFGLDTEKVIRFVENRPFNDQWYFLDDQKLK-KLG*AERTT 206
           N+G  +E  +++ A  I  L G  +E  I+F+     + Q    D +K K  LG      
Sbjct: 322 NLGNPEEHTILEFAQLIKNLVGSGSE--IQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVP 379

Query: 207 WEEGLKKTIEWYTSNPEYWGDVAGALLPHPR-MLMTPGVERHN 332
            EEGL K I ++    EY  +     +P P+   +  G  RHN
Sbjct: 380 LEEGLNKAIHYFRKELEYQAN--NQYIPKPKPARIKKGRTRHN 420

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>NH103_CAEEL (O16359) Nuclear hormone receptor family member nhr-103|
          Length = 394

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
 Frame = +3

Query: 162 DDQKLKKLG*AERT-TWEEGLKKTIEWYTSNPEY 260
           + Q +KKLG  E   TWE+G  + +EW+++  E+
Sbjct: 166 ETQIIKKLGKNESLKTWEQGFLRAVEWFSNFSEF 199

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>ARAE3_ARATH (Q9SUN3) Putative UDP-arabinose 4-epimerase 3 (EC 5.1.3.5)|
           (UDP-D-xylose 4-epimerase 3)
          Length = 411

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
 Frame = +3

Query: 24  VYNIGTVKERRVIDVASDICKLFGLDTEKVIRFVENRPFNDQWYFLDDQK-LKKLG*AER 200
           +YN+GT K R V +      K  G+D +  + F+  RP +    + D  K L+ L  + R
Sbjct: 329 IYNVGTGKGRSVKEFVEACKKATGVDIK--VDFLPRRPGDYAEVYSDPAKILRDLNWSAR 386

Query: 201 -TTWEEGLKKTIEWYTSNP 254
            T  +E L+   +W  ++P
Sbjct: 387 YTNLQESLEVAWKWQKTHP 405

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>GALE_PASHA (Q59678) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)|
           (UDP-galactose 4-epimerase)
          Length = 338

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
 Frame = +3

Query: 21  HVYNIGTVKERRVIDVASDICKLFGLDTEKVIRFVENRPFNDQWYFLDDQK-LKKLG*AE 197
           HVYN+GT     V+D+        G+      + V+ RP +    +   QK L++LG   
Sbjct: 257 HVYNLGTGTGYSVLDMVKAFEAANGITIP--YKVVDRRPGDIAVCYSAPQKALEQLGWET 314

Query: 198 RTTWEEGLKKTIEWYTSNP 254
               E+ +K T  W  +NP
Sbjct: 315 ERGLEQMMKDTWNWQKNNP 333

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>TREA_DROME (Q9W2M2) Trehalase precursor (EC 3.2.1.28) (Alpha,alpha-trehalase)|
           (Alpha,alpha-trehalose glucohydrolase)
          Length = 596

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
 Frame = +3

Query: 126 ENRPFNDQWYFLDDQKLKKLG*AERTTWEEGLKKTIEWYTSNPEYWGDVAGALLPHPRML 305
           EN  F D    + D  LK+ G    + W++  +K  +  + NPEY+     +++P P  +
Sbjct: 136 ENPSFLD---LISDPDLKQWGVELNSIWKDLGRKMKDEVSKNPEYY-----SIIPVPNPV 187

Query: 306 MTPG---VERHNW 335
           + PG   +E + W
Sbjct: 188 IVPGGRFIEFYYW 200

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>UXS1_RAT (Q5PQX0) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)|
           (UDP-glucuronate decarboxylase 1) (UGD) (UXS-1)
          Length = 420

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
 Frame = +3

Query: 30  NIGTVKERRVIDVASDICKLFGLDTEKVIRFVENRPFNDQWYFLDDQKLK-KLG*AERTT 206
           N+G  +E  +++ A  I  L G  +E  I+F+     + Q    D +K K  LG      
Sbjct: 322 NLGNPEEHTILEFAQLIKNLVGSGSE--IQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVP 379

Query: 207 WEEGLKKTIEWYTSNPEYWGDVAGALLPHPR 299
            EEGL K I ++    EY  +     +P P+
Sbjct: 380 LEEGLNKAIHYFRKELEYQAN--NQYIPKPK 408

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>UXS1_MOUSE (Q91XL3) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)|
           (UDP-glucuronate decarboxylase 1) (UGD) (UXS-1)
          Length = 420

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
 Frame = +3

Query: 30  NIGTVKERRVIDVASDICKLFGLDTEKVIRFVENRPFNDQWYFLDDQKLK-KLG*AERTT 206
           N+G  +E  +++ A  I  L G  +E  I+F+     + Q    D +K K  LG      
Sbjct: 322 NLGNPEEHTILEFAQLIKNLVGSGSE--IQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVP 379

Query: 207 WEEGLKKTIEWYTSNPEYWGDVAGALLPHPR 299
            EEGL K I ++    EY  +     +P P+
Sbjct: 380 LEEGLNKAIHYFRKELEYQAN--NQYIPKPK 408

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>UXS1_HUMAN (Q8NBZ7) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)|
           (UDP-glucuronate decarboxylase 1) (UGD) (UXS-1)
          Length = 420

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
 Frame = +3

Query: 30  NIGTVKERRVIDVASDICKLFGLDTEKVIRFVENRPFNDQWYFLDDQKLK-KLG*AERTT 206
           N+G  +E  +++ A  I  L G  +E  I+F+     + Q    D +K K  LG      
Sbjct: 322 NLGNPEEHTILEFAQLIKNLVGSGSE--IQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVP 379

Query: 207 WEEGLKKTIEWYTSNPEYWGDVAGALLPHPR 299
            EEGL K I ++    EY  +     +P P+
Sbjct: 380 LEEGLNKAIHYFRKELEYQAN--NQYIPKPK 408

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>TUSA_PSEHT (Q3IJ25) Sulfurtransferase tusA homolog (EC 2.8.1.-)|
          Length = 79

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 13/72 (18%), Positives = 31/72 (43%)
 Frame = +3

Query: 246 SNPEYWGDVAGALLPHPRMLMTPGVERHNWTEEIKSLASSPAEAKECXXXXXXXXXXXXX 425
           +NP++  D  G   P P M++   + + N  E +  +A  P+  ++              
Sbjct: 4   NNPDHQLDAIGLRCPEPVMMVRAAIRKMNDGETLLIIADDPSTTRDIPSFCTFMDHTLVA 63

Query: 426 XXPQKATYKFLI 461
              ++A Y++++
Sbjct: 64  KDAEQAPYRYVV 75

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>UXS1_BRARE (Q6GMI9) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)|
           (UDP-glucuronate decarboxylase 1) (UXS-1)
          Length = 418

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 2/103 (1%)
 Frame = +3

Query: 30  NIGTVKERRVIDVASDICKLFGLDTEKVIRFVENRPFNDQWYFLDDQKLKKL-G*AERTT 206
           N+G  +E  +++ A  I  L    +   I+F+     + Q    D +K K L G      
Sbjct: 320 NLGNPEEHTILEFAQLIKSLVA--SRSHIQFLPEAQDDPQRRRPDIRKAKLLLGWEPVVP 377

Query: 207 WEEGLKKTIEWYTSNPEYWGDVAGALLPHPRML-MTPGVERHN 332
            EEGL KTI++++   E+  +     +P P+   M  G  RHN
Sbjct: 378 LEEGLNKTIQYFSRELEHQAN--NQYIPKPKAARMKKGRPRHN 418

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>SYE_BORBU (O51345) Glutamyl-tRNA synthetase (EC 6.1.1.17) (Glutamate--tRNA|
           ligase) (GluRS)
          Length = 490

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 4/47 (8%)
 Frame = -1

Query: 507 HISSRVDHQSIQSYHILKICRWPSEG--HCWCY--WKWLQQLLCYIP 379
           H+++ VD   ++  H+L+   W S G  H   Y  +KW   + C++P
Sbjct: 196 HLANVVDDYLMKITHVLRAQEWVSSGPLHVLLYKAFKWKPPIYCHLP 242

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>GALE_PASMU (Q9CNY5) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)|
           (UDP-galactose 4-epimerase)
          Length = 338

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
 Frame = +3

Query: 21  HVYNIGTVKERRVIDVASDICKLFGLDTEKVIRFVENRPFNDQWYFLDDQKLK-KLG*AE 197
           H+YN+GT     V+D+     K+   D +   + V+ RP +    + D    K +L    
Sbjct: 257 HIYNLGTGSGYSVLDMVKAFEKV--NDIKIPYKLVDRRPGDIATCYSDPSLAKTELNWTA 314

Query: 198 RTTWEEGLKKTIEWYTSNPEYWGD 269
               E+ +K T  W   NP+ + D
Sbjct: 315 ARGLEQMMKDTWHWQKKNPKGYRD 338


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86,302,133
Number of Sequences: 219361
Number of extensions: 1823191
Number of successful extensions: 5141
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 4938
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5119
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4585734400
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result