| Clone Name | bags12i24 |
|---|---|
| Clone Library Name | barley_pub |
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 543 bits (274), Expect = e-151 Identities = 481/550 (87%) Strand = Plus / Plus Query: 12 gaggttggacacgtgtataatatcggtactgtgaaggagaggagggtaattgatgtggcg 71 |||||||| || ||||| ||||| |||||||||||||| |||||||| ||||||||||| Sbjct: 9418967 gaggttgggcatgtgtacaatattggtactgtgaaggaaaggagggtgattgatgtggcc 9419026 Query: 72 agtgacatatgcaagctatttggcttggacaccgaaaaggtcatcaggttcgtcgagaac 131 | |||||||||||||| ||||||||||||||||| ||||||||||| || || |||||| Sbjct: 9419027 aaggacatatgcaagctctttggcttggacaccgagaaggtcatcagatttgttgagaac 9419086 Query: 132 aggcccttcaatgaccagtggtacttcctggatgatcagaaactgaagaagttgggatag 191 ||||| ||||| |||||| | |||||| ||||||||||||| |||||||| ||||||| | Sbjct: 9419087 aggcctttcaacgaccagagatacttcttggatgatcagaagctgaagaaattgggatgg 9419146 Query: 192 gcagagcgcacaacatgggaagagggtttgaagaaaacaattgaatggtacacaagtaat 251 |||||||||||| |||||||||||| |||||||||||||||||||||||||| | ||| Sbjct: 9419147 gcagagcgcacactatgggaagaggggttgaagaaaacaattgaatggtacactaacaat 9419206 Query: 252 cctgagtactggggcgatgttgccggtgcattgctccctcatccaaggatgttgatgacg 311 ||||| |||||||| ||||| || ||||| ||||||||||||||||||||||||||||| Sbjct: 9419207 cctgattactggggagatgtcgcaggtgccttgctccctcatccaaggatgttgatgaca 9419266 Query: 312 cctggagttgaaaggcataactggactgaggaaatcaaatctcttgcttcttcgccagct 371 ||||||||||||||||||||||||||||| || |||||||||||| | |||| |||| | Sbjct: 9419267 cctggagttgaaaggcataactggactgatgagatcaaatctctttccacttcaccagat 9419326 Query: 372 gaagccaaggaatgtaacacagtagctgctgcagccacttccaatagcaccagcagtgcc 431 ||||| ||||||| || ||| | | | ||||||||||| |||| ||||||||||||||| Sbjct: 9419327 gaagctaaggaatctagcactgcggttcctgcagccactgccaaaagcaccagcagtgcc 9419386 Query: 432 cctcagaaggccacctacaaatttttaatatatggtaagactggatggattggtggtcta 491 ||||| |||||| | ||||| || || |||||||||| |||||||||||||||||||||| Sbjct: 9419387 cctcaaaaggcctcatacaagttcttgatatatggtaggactggatggattggtggtcta 9419446 Query: 492 ctcgggaagatatgtgagaagcaaagcataccttatgaatatggtaaagggcgcctacaa 551 || || |||||||||||||||||| | || || ||||| ||||| ||||| ||||| || Sbjct: 9419447 cttggtaagatatgtgagaagcaagggattccatatgagtatgggaaaggacgcctggaa 9419506 Query: 552 gagcgctctc 561 |||||||||| Sbjct: 9419507 gagcgctctc 9419516
>gb|AC083942.8| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0002D01, from chromosome 3, complete sequence Length = 187589 Score = 543 bits (274), Expect = e-151 Identities = 481/550 (87%) Strand = Plus / Plus Query: 12 gaggttggacacgtgtataatatcggtactgtgaaggagaggagggtaattgatgtggcg 71 |||||||| || ||||| ||||| |||||||||||||| |||||||| ||||||||||| Sbjct: 116367 gaggttgggcatgtgtacaatattggtactgtgaaggaaaggagggtgattgatgtggcc 116426 Query: 72 agtgacatatgcaagctatttggcttggacaccgaaaaggtcatcaggttcgtcgagaac 131 | |||||||||||||| ||||||||||||||||| ||||||||||| || || |||||| Sbjct: 116427 aaggacatatgcaagctctttggcttggacaccgagaaggtcatcagatttgttgagaac 116486 Query: 132 aggcccttcaatgaccagtggtacttcctggatgatcagaaactgaagaagttgggatag 191 ||||| ||||| |||||| | |||||| ||||||||||||| |||||||| ||||||| | Sbjct: 116487 aggcctttcaacgaccagagatacttcttggatgatcagaagctgaagaaattgggatgg 116546 Query: 192 gcagagcgcacaacatgggaagagggtttgaagaaaacaattgaatggtacacaagtaat 251 |||||||||||| |||||||||||| |||||||||||||||||||||||||| | ||| Sbjct: 116547 gcagagcgcacactatgggaagaggggttgaagaaaacaattgaatggtacactaacaat 116606 Query: 252 cctgagtactggggcgatgttgccggtgcattgctccctcatccaaggatgttgatgacg 311 ||||| |||||||| ||||| || ||||| ||||||||||||||||||||||||||||| Sbjct: 116607 cctgattactggggagatgtcgcaggtgccttgctccctcatccaaggatgttgatgaca 116666 Query: 312 cctggagttgaaaggcataactggactgaggaaatcaaatctcttgcttcttcgccagct 371 ||||||||||||||||||||||||||||| || |||||||||||| | |||| |||| | Sbjct: 116667 cctggagttgaaaggcataactggactgatgagatcaaatctctttccacttcaccagat 116726 Query: 372 gaagccaaggaatgtaacacagtagctgctgcagccacttccaatagcaccagcagtgcc 431 ||||| ||||||| || ||| | | | ||||||||||| |||| ||||||||||||||| Sbjct: 116727 gaagctaaggaatctagcactgcggttcctgcagccactgccaaaagcaccagcagtgcc 116786 Query: 432 cctcagaaggccacctacaaatttttaatatatggtaagactggatggattggtggtcta 491 ||||| |||||| | ||||| || || |||||||||| |||||||||||||||||||||| Sbjct: 116787 cctcaaaaggcctcatacaagttcttgatatatggtaggactggatggattggtggtcta 116846 Query: 492 ctcgggaagatatgtgagaagcaaagcataccttatgaatatggtaaagggcgcctacaa 551 || || |||||||||||||||||| | || || ||||| ||||| ||||| ||||| || Sbjct: 116847 cttggtaagatatgtgagaagcaagggattccatatgagtatgggaaaggacgcctggaa 116906 Query: 552 gagcgctctc 561 |||||||||| Sbjct: 116907 gagcgctctc 116916
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 543 bits (274), Expect = e-151 Identities = 481/550 (87%) Strand = Plus / Plus Query: 12 gaggttggacacgtgtataatatcggtactgtgaaggagaggagggtaattgatgtggcg 71 |||||||| || ||||| ||||| |||||||||||||| |||||||| ||||||||||| Sbjct: 9417088 gaggttgggcatgtgtacaatattggtactgtgaaggaaaggagggtgattgatgtggcc 9417147 Query: 72 agtgacatatgcaagctatttggcttggacaccgaaaaggtcatcaggttcgtcgagaac 131 | |||||||||||||| ||||||||||||||||| ||||||||||| || || |||||| Sbjct: 9417148 aaggacatatgcaagctctttggcttggacaccgagaaggtcatcagatttgttgagaac 9417207 Query: 132 aggcccttcaatgaccagtggtacttcctggatgatcagaaactgaagaagttgggatag 191 ||||| ||||| |||||| | |||||| ||||||||||||| |||||||| ||||||| | Sbjct: 9417208 aggcctttcaacgaccagagatacttcttggatgatcagaagctgaagaaattgggatgg 9417267 Query: 192 gcagagcgcacaacatgggaagagggtttgaagaaaacaattgaatggtacacaagtaat 251 |||||||||||| |||||||||||| |||||||||||||||||||||||||| | ||| Sbjct: 9417268 gcagagcgcacactatgggaagaggggttgaagaaaacaattgaatggtacactaacaat 9417327 Query: 252 cctgagtactggggcgatgttgccggtgcattgctccctcatccaaggatgttgatgacg 311 ||||| |||||||| ||||| || ||||| ||||||||||||||||||||||||||||| Sbjct: 9417328 cctgattactggggagatgtcgcaggtgccttgctccctcatccaaggatgttgatgaca 9417387 Query: 312 cctggagttgaaaggcataactggactgaggaaatcaaatctcttgcttcttcgccagct 371 ||||||||||||||||||||||||||||| || |||||||||||| | |||| |||| | Sbjct: 9417388 cctggagttgaaaggcataactggactgatgagatcaaatctctttccacttcaccagat 9417447 Query: 372 gaagccaaggaatgtaacacagtagctgctgcagccacttccaatagcaccagcagtgcc 431 ||||| ||||||| || ||| | | | ||||||||||| |||| ||||||||||||||| Sbjct: 9417448 gaagctaaggaatctagcactgcggttcctgcagccactgccaaaagcaccagcagtgcc 9417507 Query: 432 cctcagaaggccacctacaaatttttaatatatggtaagactggatggattggtggtcta 491 ||||| |||||| | ||||| || || |||||||||| |||||||||||||||||||||| Sbjct: 9417508 cctcaaaaggcctcatacaagttcttgatatatggtaggactggatggattggtggtcta 9417567 Query: 492 ctcgggaagatatgtgagaagcaaagcataccttatgaatatggtaaagggcgcctacaa 551 || || |||||||||||||||||| | || || ||||| ||||| ||||| ||||| || Sbjct: 9417568 cttggtaagatatgtgagaagcaagggattccatatgagtatgggaaaggacgcctggaa 9417627 Query: 552 gagcgctctc 561 |||||||||| Sbjct: 9417628 gagcgctctc 9417637
>dbj|AK103544.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033132E05, full insert sequence Length = 2499 Score = 535 bits (270), Expect = e-149 Identities = 480/550 (87%) Strand = Plus / Plus Query: 12 gaggttggacacgtgtataatatcggtactgtgaaggagaggagggtaattgatgtggcg 71 |||||||| || ||||| ||||| |||||||||||||| |||||||| ||||||||||| Sbjct: 882 gaggttgggcatgtgtacaatattggtactgtgaaggaaaggagggtgattgatgtggcc 941 Query: 72 agtgacatatgcaagctatttggcttggacaccgaaaaggtcatcaggttcgtcgagaac 131 | |||||||||||||| ||||||||||||||||| ||||||||||| || || |||||| Sbjct: 942 aaggacatatgcaagctctttggcttggacaccgagaaggtcatcagatttgttgagaac 1001 Query: 132 aggcccttcaatgaccagtggtacttcctggatgatcagaaactgaagaagttgggatag 191 ||||| ||||| |||||| | |||||| ||||||||||||| |||||||| ||| ||| | Sbjct: 1002 aggcctttcaacgaccagagatacttcttggatgatcagaagctgaagaaattgcgatgg 1061 Query: 192 gcagagcgcacaacatgggaagagggtttgaagaaaacaattgaatggtacacaagtaat 251 |||||||||||| |||||||||||| |||||||||||||||||||||||||| | ||| Sbjct: 1062 gcagagcgcacactatgggaagaggggttgaagaaaacaattgaatggtacactaacaat 1121 Query: 252 cctgagtactggggcgatgttgccggtgcattgctccctcatccaaggatgttgatgacg 311 ||||| |||||||| ||||| || ||||| ||||||||||||||||||||||||||||| Sbjct: 1122 cctgattactggggagatgtcgcaggtgccttgctccctcatccaaggatgttgatgaca 1181 Query: 312 cctggagttgaaaggcataactggactgaggaaatcaaatctcttgcttcttcgccagct 371 ||||||||||||||||||||||||||||| || |||||||||||| | |||| |||| | Sbjct: 1182 cctggagttgaaaggcataactggactgatgagatcaaatctctttccacttcaccagat 1241 Query: 372 gaagccaaggaatgtaacacagtagctgctgcagccacttccaatagcaccagcagtgcc 431 ||||| ||||||| || ||| | | | ||||||||||| |||| ||||||||||||||| Sbjct: 1242 gaagctaaggaatctagcactgcggttcctgcagccactgccaaaagcaccagcagtgcc 1301 Query: 432 cctcagaaggccacctacaaatttttaatatatggtaagactggatggattggtggtcta 491 ||||| |||||| | ||||| || || |||||||||| |||||||||||||||||||||| Sbjct: 1302 cctcaaaaggcctcatacaagttcttgatatatggtaggactggatggattggtggtcta 1361 Query: 492 ctcgggaagatatgtgagaagcaaagcataccttatgaatatggtaaagggcgcctacaa 551 || || |||||||||||||||||| | || || ||||| ||||| ||||| ||||| || Sbjct: 1362 cttggtaagatatgtgagaagcaagggattccatatgagtatgggaaaggacgcctggaa 1421 Query: 552 gagcgctctc 561 |||||||||| Sbjct: 1422 gagcgctctc 1431
>dbj|AK064303.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-B05, full insert sequence Length = 1892 Score = 535 bits (270), Expect = e-149 Identities = 480/550 (87%) Strand = Plus / Plus Query: 12 gaggttggacacgtgtataatatcggtactgtgaaggagaggagggtaattgatgtggcg 71 |||||||| || ||||| ||||| |||||||||||||| |||||||| ||||||||||| Sbjct: 273 gaggttgggcatgtgtacaatattggtactgtgaaggaaaggagggtgattgatgtggcc 332 Query: 72 agtgacatatgcaagctatttggcttggacaccgaaaaggtcatcaggttcgtcgagaac 131 | |||||||||||||| ||||||||||||||||| ||||||||||| || || |||||| Sbjct: 333 aaggacatatgcaagctctttggcttggacaccgagaaggtcatcagatttgttgagaac 392 Query: 132 aggcccttcaatgaccagtggtacttcctggatgatcagaaactgaagaagttgggatag 191 ||||| ||||| |||||| | |||||| ||||||||||||| |||||||| ||||||| | Sbjct: 393 aggcctttcaacgaccagagatacttcttggatgatcagaagctgaagaaattgggatgg 452 Query: 192 gcagagcgcacaacatgggaagagggtttgaagaaaacaattgaatggtacacaagtaat 251 |||||||||||| |||||||||||| |||||||||||||||||||||||||| | ||| Sbjct: 453 gcagagcgcacactatgggaagaggggttgaagaaaacaattgaatggtacactaacaat 512 Query: 252 cctgagtactggggcgatgttgccggtgcattgctccctcatccaaggatgttgatgacg 311 ||||| |||||||| ||||| || ||||| |||||||||||| |||||||||||||||| Sbjct: 513 cctgattactggggagatgtcgcaggtgccttgctccctcattcaaggatgttgatgaca 572 Query: 312 cctggagttgaaaggcataactggactgaggaaatcaaatctcttgcttcttcgccagct 371 ||||||||||||||||||||||||||||| || |||||||||||| | |||| |||| | Sbjct: 573 cctggagttgaaaggcataactggactgatgagatcaaatctctttccacttcaccagat 632 Query: 372 gaagccaaggaatgtaacacagtagctgctgcagccacttccaatagcaccagcagtgcc 431 ||||| ||||||| || ||| | | | ||||||||||| |||| ||||||||||||||| Sbjct: 633 gaagctaaggaatctagcactgcggttcctgcagccactgccaaaagcaccagcagtgcc 692 Query: 432 cctcagaaggccacctacaaatttttaatatatggtaagactggatggattggtggtcta 491 ||||| |||||| | ||||| || || |||||||||| |||||||||||||||||||||| Sbjct: 693 cctcaaaaggcctcatacaagttcttgatatatggtaggactggatggattggtggtcta 752 Query: 492 ctcgggaagatatgtgagaagcaaagcataccttatgaatatggtaaagggcgcctacaa 551 || || |||||||||||||||||| | || || ||||| ||||| ||||| ||||| || Sbjct: 753 cttggtaagatatgtgagaagcaagggattccatatgagtatgggaaaggacgcctggaa 812 Query: 552 gagcgctctc 561 |||||||||| Sbjct: 813 gagcgctctc 822
>gb|BT018879.1| Zea mays clone EL01T0203E01.d mRNA sequence Length = 2108 Score = 333 bits (168), Expect = 4e-88 Identities = 315/363 (86%), Gaps = 1/363 (0%) Strand = Plus / Plus Query: 15 gttggacacgtgtataatatcggtactgtgaaggaga-ggagggtaattgatgtggcgag 73 |||||||| ||||||||||| |||||||||||||||| ||||||| |||||||| || | Sbjct: 645 gttggacatgtgtataatattggtactgtgaaggagaaggagggtgattgatgtagccaa 704 Query: 74 tgacatatgcaagctatttggcttggacaccgaaaaggtcatcaggttcgtcgagaacag 133 |||||||||||||| ||||||||||| || || || ||||||| ||| || |||||||| Sbjct: 705 ggacatatgcaagctctttggcttggatactgagaaagtcatcangtttgttgagaacag 764 Query: 134 gcccttcaatgaccagtggtacttcctggatgatcagaaactgaagaagttgggataggc 193 |||||||||||||||| |||||||| | ||||||||||| || |||| ||||||| ||| Sbjct: 765 gcccttcaatgaccagaggtacttcttagatgatcagaagctaaagagattgggatgggc 824 Query: 194 agagcgcacaacatgggaagagggtttgaagaaaacaattgaatggtacacaagtaatcc 253 ||||||| | ||||||||||||| |||||||| || || || |||||||| | ||||| Sbjct: 825 agagcgcccttcatgggaagagggcttgaagaagacgatggagtggtacaccaccaatcc 884 Query: 254 tgagtactggggcgatgttgccggtgcattgctccctcatccaaggatgttgatgacgcc 313 ||| |||||||| ||||| | ||||| |||| ||||||||||||||||||||||| || Sbjct: 885 tgattactggggagatgtcactggtgcgctgcttcctcatccaaggatgttgatgactcc 944 Query: 314 tggagttgaaaggcataactggactgaggaaatcaaatctcttgcttcttcgccagctga 373 |||||||||||||||||||||| |||| |||||||| ||||| ||||||||||||||||| Sbjct: 945 tggagttgaaaggcataactgggctgaagaaatcaagtctctggcttcttcgccagctga 1004 Query: 374 agc 376 ||| Sbjct: 1005 agc 1007 Score = 91.7 bits (46), Expect = 2e-15 Identities = 112/134 (83%) Strand = Plus / Plus Query: 428 tgcccctcagaaggccacctacaaatttttaatatatggtaagactggatggattggtgg 487 ||||||||||||| | |||||| |||||||| ||||||| |||||||||||||||||| Sbjct: 1050 tgcccctcagaagccttcctacaggtttttaatctatggtaggactggatggattggtgg 1109 Query: 488 tctactcgggaagatatgtgagaagcaaagcataccttatgaatatggtaaagggcgcct 547 || || || ||||| ||||| |||||| | ||||| ||||| ||||| ||||| ||| | Sbjct: 1110 cctccttggaaagatttgtgaaaagcaagggataccatatgagtatgggaaaggacgctt 1169 Query: 548 acaagagcgctctc 561 |||||||||||| Sbjct: 1170 ggaagagcgctctc 1183
>gb|AY103981.1| Zea mays PCO118173 mRNA sequence Length = 1418 Score = 264 bits (133), Expect = 3e-67 Identities = 239/273 (87%), Gaps = 1/273 (0%) Strand = Plus / Plus Query: 105 gaaaaggtcatcaggttcgtcgagaacaggcccttcaatgaccagtggtacttcctggat 164 ||||| || |||||||| || |||||||||||||||||||||||| |||||||| ||||| Sbjct: 2 gaaaaagtaatcaggtttgttgagaacaggcccttcaatgaccagaggtacttcttggat 61 Query: 165 gatcagaaactgaagaagttgggatagg-cagagcgcacaacatgggaagagggtttgaa 223 |||||||| || |||| |||||| || ||||||||||| ||||||||||||| ||||| Sbjct: 62 gatcagaagcttaagagactgggatggggcagagcgcacaccatgggaagagggcttgaa 121 Query: 224 gaaaacaattgaatggtacacaagtaatcctgagtactggggcgatgttgccggtgcatt 283 ||| ||||| || |||||||| | |||||||| |||||||| ||||| | ||||| || Sbjct: 122 gaagacaatcgagtggtacaccaccaatcctgattactggggagatgtcactggtgcttt 181 Query: 284 gctccctcatccaaggatgttgatgacgcctggagttgaaaggcataactggactgagga 343 ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 182 gctccctcacccaaggatgttgatgattcctggagttgaaaggcataactggactgagga 241 Query: 344 aatcaaatctcttgcttcttcgccagctgaagc 376 ||||||||||| ||||||| ||||||||||| Sbjct: 242 tatcaaatctctgacttcttcaccagctgaagc 274 Score = 77.8 bits (39), Expect = 3e-11 Identities = 81/95 (85%) Strand = Plus / Plus Query: 447 tacaaatttttaatatatggtaagactggatggattggtggtctactcgggaagatatgt 506 ||||| || ||||| ||||| | |||||||||||||||||| || || |||||||| ||| Sbjct: 336 tacaagttcttaatctatggcaggactggatggattggtggcctccttgggaagatttgt 395 Query: 507 gagaagcaaagcataccttatgaatatggtaaagg 541 || |||||| | ||||| ||||||||||| ||||| Sbjct: 396 gacaagcaagggataccatatgaatatgggaaagg 430
>ref|NM_106505.3| Arabidopsis thaliana ATTPS1 (TREHALOSE-6-PHOSPHATE SYNTHASE); transferase, transferring glycosyl groups AT1G78580 (ATTPS1) mRNA, complete cds Length = 4635 Score = 95.6 bits (48), Expect = 1e-16 Identities = 165/204 (80%) Strand = Plus / Minus Query: 113 catcaggttcgtcgagaacaggcccttcaatgaccagtggtacttcctggatgatcagaa 172 ||||| ||| ||||| ||||| || || || || ||| |||||||||| || |||||||| Sbjct: 4472 catcaagtttgtcgacaacagaccttttaacgatcagaggtacttccttgacgatcagaa 4413 Query: 173 actgaagaagttgggataggcagagcgcacaacatgggaagagggtttgaagaaaacaat 232 || || |||||||||| | ||||| | || || |||||||| || ||||||||||| || Sbjct: 4412 gctcaaaaagttgggatggtcagagagaaccacgtgggaagaagggttgaagaaaactat 4353 Query: 233 tgaatggtacacaagtaatcctgagtactggggcgatgttgccggtgcattgctccctca 292 || ||||||||| || || |||| ||||| |||||| | || |||||||| ||||| Sbjct: 4352 ggattggtacacacagaacccggagtggtggggtgatgtttctggagcattgcttcctca 4293 Query: 293 tccaaggatgttgatgacgcctgg 316 |||||||||| |||||| |||||| Sbjct: 4292 tccaaggatgctgatgatgcctgg 4269 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 459 atatatggtaagactggatggattggtggtctactcgggaagatatgtgagaagcaa 515 |||||||| ||||| |||||||| |||||||| || || ||||||||||| |||||| Sbjct: 4135 atatatggaaagaccggatggatcggtggtctgcttggaaagatatgtgataagcaa 4079
>ref|NM_106504.2| Arabidopsis thaliana RHM1; NAD binding / catalytic AT1G78570 (RHM1) transcript variant AT1G78570.1 mRNA, complete cds Length = 2744 Score = 95.6 bits (48), Expect = 1e-16 Identities = 165/204 (80%) Strand = Plus / Plus Query: 113 catcaggttcgtcgagaacaggcccttcaatgaccagtggtacttcctggatgatcagaa 172 ||||| ||| ||||| ||||| || || || || ||| |||||||||| || |||||||| Sbjct: 1003 catcaagtttgtcgacaacagaccttttaacgatcagaggtacttccttgacgatcagaa 1062 Query: 173 actgaagaagttgggataggcagagcgcacaacatgggaagagggtttgaagaaaacaat 232 || || |||||||||| | ||||| | || || |||||||| || ||||||||||| || Sbjct: 1063 gctcaaaaagttgggatggtcagagagaaccacgtgggaagaagggttgaagaaaactat 1122 Query: 233 tgaatggtacacaagtaatcctgagtactggggcgatgttgccggtgcattgctccctca 292 || ||||||||| || || |||| ||||| |||||| | || |||||||| ||||| Sbjct: 1123 ggattggtacacacagaacccggagtggtggggtgatgtttctggagcattgcttcctca 1182 Query: 293 tccaaggatgttgatgacgcctgg 316 |||||||||| |||||| |||||| Sbjct: 1183 tccaaggatgctgatgatgcctgg 1206 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 459 atatatggtaagactggatggattggtggtctactcgggaagatatgtgagaagcaa 515 |||||||| ||||| |||||||| |||||||| || || ||||||||||| |||||| Sbjct: 1340 atatatggaaagaccggatggatcggtggtctgcttggaaagatatgtgataagcaa 1396
>ref|NM_001036220.1| Arabidopsis thaliana RHM1; NAD binding / catalytic AT1G78570 (RHM1) transcript variant AT1G78570.2 mRNA, complete cds Length = 2912 Score = 95.6 bits (48), Expect = 1e-16 Identities = 165/204 (80%) Strand = Plus / Plus Query: 113 catcaggttcgtcgagaacaggcccttcaatgaccagtggtacttcctggatgatcagaa 172 ||||| ||| ||||| ||||| || || || || ||| |||||||||| || |||||||| Sbjct: 1049 catcaagtttgtcgacaacagaccttttaacgatcagaggtacttccttgacgatcagaa 1108 Query: 173 actgaagaagttgggataggcagagcgcacaacatgggaagagggtttgaagaaaacaat 232 || || |||||||||| | ||||| | || || |||||||| || ||||||||||| || Sbjct: 1109 gctcaaaaagttgggatggtcagagagaaccacgtgggaagaagggttgaagaaaactat 1168 Query: 233 tgaatggtacacaagtaatcctgagtactggggcgatgttgccggtgcattgctccctca 292 || ||||||||| || || |||| ||||| |||||| | || |||||||| ||||| Sbjct: 1169 ggattggtacacacagaacccggagtggtggggtgatgtttctggagcattgcttcctca 1228 Query: 293 tccaaggatgttgatgacgcctgg 316 |||||||||| |||||| |||||| Sbjct: 1229 tccaaggatgctgatgatgcctgg 1252 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 459 atatatggtaagactggatggattggtggtctactcgggaagatatgtgagaagcaa 515 |||||||| ||||| |||||||| |||||||| || || ||||||||||| |||||| Sbjct: 1386 atatatggaaagaccggatggatcggtggtctgcttggaaagatatgtgataagcaa 1442
>gb|AC007260.2| Arabidopsis thaliana chromosome I BAC T30F21 genomic sequence, complete sequence Length = 78378 Score = 95.6 bits (48), Expect = 1e-16 Identities = 165/204 (80%) Strand = Plus / Minus Query: 113 catcaggttcgtcgagaacaggcccttcaatgaccagtggtacttcctggatgatcagaa 172 ||||| ||| ||||| ||||| || || || || ||| |||||||||| || |||||||| Sbjct: 39811 catcaagtttgtcgacaacagaccttttaacgatcagaggtacttccttgacgatcagaa 39752 Query: 173 actgaagaagttgggataggcagagcgcacaacatgggaagagggtttgaagaaaacaat 232 || || |||||||||| | ||||| | || || |||||||| || ||||||||||| || Sbjct: 39751 gctcaaaaagttgggatggtcagagagaaccacgtgggaagaagggttgaagaaaactat 39692 Query: 233 tgaatggtacacaagtaatcctgagtactggggcgatgttgccggtgcattgctccctca 292 || ||||||||| || || |||| ||||| |||||| | || |||||||| ||||| Sbjct: 39691 ggattggtacacacagaacccggagtggtggggtgatgtttctggagcattgcttcctca 39632 Query: 293 tccaaggatgttgatgacgcctgg 316 |||||||||| |||||| |||||| Sbjct: 39631 tccaaggatgctgatgatgcctgg 39608 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 459 atatatggtaagactggatggattggtggtctactcgggaagatatgtgagaagcaa 515 |||||||| ||||| |||||||| |||||||| || || ||||||||||| |||||| Sbjct: 39474 atatatggaaagaccggatggatcggtggtctgcttggaaagatatgtgataagcaa 39418
>gb|AY081471.1| Arabidopsis thaliana similar to dTDP-D-glucose 4,6-dehydratase (At1g78570) mRNA, complete cds Length = 2126 Score = 95.6 bits (48), Expect = 1e-16 Identities = 165/204 (80%) Strand = Plus / Plus Query: 113 catcaggttcgtcgagaacaggcccttcaatgaccagtggtacttcctggatgatcagaa 172 ||||| ||| ||||| ||||| || || || || ||| |||||||||| || |||||||| Sbjct: 828 catcaagtttgtcgacaacagaccttttaacgatcagaggtacttccttgacgatcagaa 887 Query: 173 actgaagaagttgggataggcagagcgcacaacatgggaagagggtttgaagaaaacaat 232 || || |||||||||| | ||||| | || || |||||||| || ||||||||||| || Sbjct: 888 gctcaaaaagttgggatggtcagagagaaccacgtgggaagaagggttgaagaaaactat 947 Query: 233 tgaatggtacacaagtaatcctgagtactggggcgatgttgccggtgcattgctccctca 292 || ||||||||| || || |||| ||||| |||||| | || |||||||| ||||| Sbjct: 948 ggattggtacacacagaacccggagtggtggggtgatgtttctggagcattgcttcctca 1007 Query: 293 tccaaggatgttgatgacgcctgg 316 |||||||||| |||||| |||||| Sbjct: 1008 tccaaggatgctgatgatgcctgg 1031 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 459 atatatggtaagactggatggattggtggtctactcgggaagatatgtgagaagcaa 515 |||||||| ||||| |||||||| |||||||| || || ||||||||||| |||||| Sbjct: 1165 atatatggaaagaccggatggatcggtggtctgcttggaaagatatgtgataagcaa 1221
>gb|AY042833.1| Arabidopsis thaliana Similar to dTDP-D-glucose 4,6-dehydratase (T30F21.10) mRNA, complete cds Length = 2347 Score = 95.6 bits (48), Expect = 1e-16 Identities = 165/204 (80%) Strand = Plus / Plus Query: 113 catcaggttcgtcgagaacaggcccttcaatgaccagtggtacttcctggatgatcagaa 172 ||||| ||| ||||| ||||| || || || || ||| |||||||||| || |||||||| Sbjct: 1003 catcaagtttgtcgacaacagaccttttaacgatcagaggtacttccttgacgatcagaa 1062 Query: 173 actgaagaagttgggataggcagagcgcacaacatgggaagagggtttgaagaaaacaat 232 || || |||||||||| | ||||| | || || |||||||| || ||||||||||| || Sbjct: 1063 gctcaaaaagttgggatggtcagagagaaccacgtgggaagaagggttgaagaaaactat 1122 Query: 233 tgaatggtacacaagtaatcctgagtactggggcgatgttgccggtgcattgctccctca 292 || ||||||||| || || |||| ||||| |||||| | || |||||||| ||||| Sbjct: 1123 ggattggtacacacagaacccggagtggtggggtgatgtttctggagcattgcttcctca 1182 Query: 293 tccaaggatgttgatgacgcctgg 316 |||||||||| |||||| |||||| Sbjct: 1183 tccaaggatgctgatgatgcctgg 1206 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 459 atatatggtaagactggatggattggtggtctactcgggaagatatgtgagaagcaa 515 |||||||| ||||| |||||||| |||||||| || || ||||||||||| |||||| Sbjct: 1340 atatatggaaagaccggatggatcggtggtctgcttggaaagatatgtgataagcaa 1396
>emb|BX815784.1|CNS0AAK8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS94ZD06 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2309 Score = 95.6 bits (48), Expect = 1e-16 Identities = 165/204 (80%) Strand = Plus / Plus Query: 113 catcaggttcgtcgagaacaggcccttcaatgaccagtggtacttcctggatgatcagaa 172 ||||| ||| ||||| ||||| || || || || ||| |||||||||| || |||||||| Sbjct: 1004 catcaagtttgtcgacaacagaccttttaacgatcagaggtacttccttgacgatcagaa 1063 Query: 173 actgaagaagttgggataggcagagcgcacaacatgggaagagggtttgaagaaaacaat 232 || || |||||||||| | ||||| | || || |||||||| || ||||||||||| || Sbjct: 1064 gctcaaaaagttgggatggtcagagagaaccacgtgggaagaagggttgaagaaaactat 1123 Query: 233 tgaatggtacacaagtaatcctgagtactggggcgatgttgccggtgcattgctccctca 292 || ||||||||| || || |||| ||||| |||||| | || |||||||| ||||| Sbjct: 1124 ggattggtacacacagaacccggagtggtggggtgatgtttctggagcattgcttcctca 1183 Query: 293 tccaaggatgttgatgacgcctgg 316 |||||||||| |||||| |||||| Sbjct: 1184 tccaaggatgctgatgatgcctgg 1207 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 459 atatatggtaagactggatggattggtggtctactcgggaagatatgtgagaagcaa 515 |||||||| ||||| |||||||| |||||||| || || ||||||||||| |||||| Sbjct: 1341 atatatggaaagaccggatggatcggtggtctgcttggaaagatatgtgataagcaa 1397
>ref|NM_104228.3| Arabidopsis thaliana MUM4 (MUCILAGE-MODIFIED 4); catalytic AT1G53500 (MUM4) mRNA, complete cds Length = 2526 Score = 83.8 bits (42), Expect = 6e-13 Identities = 138/170 (81%) Strand = Plus / Plus Query: 126 gagaacaggcccttcaatgaccagtggtacttcctggatgatcagaaactgaagaagttg 185 |||||| ||||||| ||||| || |||||||||| ||||||||||| |||||||| ||| Sbjct: 1156 gagaaccggccctttaatgatcaaaggtacttccttgatgatcagaagctgaagaaattg 1215 Query: 186 ggataggcagagcgcacaacatgggaagagggtttgaagaaaacaattgaatggtacaca 245 || | | |||||| |||| |||||||| || |||||||| ||||| || |||||||| Sbjct: 1216 gggtggcaagagcgaacaaattgggaagatggattgaagaagacaatggactggtacact 1275 Query: 246 agtaatcctgagtactggggcgatgttgccggtgcattgctccctcatcc 295 |||||||||| ||||| |||||| | || || ||||| |||||||| Sbjct: 1276 cagaatcctgagtggtggggtgatgtttctggagctttgcttcctcatcc 1325 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 453 tttttaatatatggtaagactggatggattggtggtctactcgggaagatatgtgagaag 512 ||||| || |||||||||||||| ||| |||||||||| || ||||| ||||||||||| Sbjct: 1462 tttttgatctatggtaagactggttggcttggtggtcttctagggaaactatgtgagaag 1521 Query: 513 caa 515 ||| Sbjct: 1522 caa 1524
>gb|AY328518.1| Arabidopsis thaliana putative UDP-L-rhamnose synthase MUM4 (MUM4) mRNA, complete cds Length = 2479 Score = 83.8 bits (42), Expect = 6e-13 Identities = 138/170 (81%) Strand = Plus / Plus Query: 126 gagaacaggcccttcaatgaccagtggtacttcctggatgatcagaaactgaagaagttg 185 |||||| ||||||| ||||| || |||||||||| ||||||||||| |||||||| ||| Sbjct: 1157 gagaaccggccctttaatgatcaaaggtacttccttgatgatcagaagctgaagaaattg 1216 Query: 186 ggataggcagagcgcacaacatgggaagagggtttgaagaaaacaattgaatggtacaca 245 || | | |||||| |||| |||||||| || |||||||| ||||| || |||||||| Sbjct: 1217 gggtggcaagagcgaacaaattgggaagatggattgaagaagacaatggactggtacact 1276 Query: 246 agtaatcctgagtactggggcgatgttgccggtgcattgctccctcatcc 295 |||||||||| ||||| |||||| | || || ||||| |||||||| Sbjct: 1277 cagaatcctgagtggtggggtgatgtttctggagctttgcttcctcatcc 1326 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 453 tttttaatatatggtaagactggatggattggtggtctactcgggaagatatgtgagaag 512 ||||| || |||||||||||||| ||| |||||||||| || ||||| ||||||||||| Sbjct: 1463 tttttgatctatggtaagactggttggcttggtggtcttctagggaaactatgtgagaag 1522 Query: 513 caa 515 ||| Sbjct: 1523 caa 1525
>emb|AJ565874.1|ATH565874 Arabidopsis thaliana mRNA for putative NDP-rhamnose synthase (rhm2 gene) Length = 2004 Score = 83.8 bits (42), Expect = 6e-13 Identities = 138/170 (81%) Strand = Plus / Plus Query: 126 gagaacaggcccttcaatgaccagtggtacttcctggatgatcagaaactgaagaagttg 185 |||||| ||||||| ||||| || |||||||||| ||||||||||| |||||||| ||| Sbjct: 847 gagaaccggccctttaatgatcaaaggtacttccttgatgatcagaagctgaagaaattg 906 Query: 186 ggataggcagagcgcacaacatgggaagagggtttgaagaaaacaattgaatggtacaca 245 || | | |||||| |||| |||||||| || |||||||| ||||| || |||||||| Sbjct: 907 gggtggcaagagcgaacaaattgggaagatggattgaagaagacaatggactggtacact 966 Query: 246 agtaatcctgagtactggggcgatgttgccggtgcattgctccctcatcc 295 |||||||||| ||||| |||||| | || || ||||| |||||||| Sbjct: 967 cagaatcctgagtggtggggtgatgtttctggagctttgcttcctcatcc 1016 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 453 tttttaatatatggtaagactggatggattggtggtctactcgggaagatatgtgagaag 512 ||||| || |||||||||||||| ||| |||||||||| || ||||| ||||||||||| Sbjct: 1153 tttttgatctatggtaagactggttggcttggtggtcttctagggaaactatgtgagaag 1212 Query: 513 caa 515 ||| Sbjct: 1213 caa 1215
>gb|AY048277.1| Arabidopsis thaliana At1g53500/F22G10_13 mRNA, complete cds Length = 1739 Score = 83.8 bits (42), Expect = 6e-13 Identities = 138/170 (81%) Strand = Plus / Plus Query: 126 gagaacaggcccttcaatgaccagtggtacttcctggatgatcagaaactgaagaagttg 185 |||||| ||||||| ||||| || |||||||||| ||||||||||| |||||||| ||| Sbjct: 417 gagaaccggccctttaatgatcaaaggtacttccttgatgatcagaagctgaagaaattg 476 Query: 186 ggataggcagagcgcacaacatgggaagagggtttgaagaaaacaattgaatggtacaca 245 || | | |||||| |||| |||||||| || |||||||| ||||| || |||||||| Sbjct: 477 gggtggcaagagcgaacaaattgggaagatggattgaagaagacaatggactggtacact 536 Query: 246 agtaatcctgagtactggggcgatgttgccggtgcattgctccctcatcc 295 |||||||||| ||||| |||||| | || || ||||| |||||||| Sbjct: 537 cagaatcctgagtggtggggtgatgtttctggagctttgcttcctcatcc 586 Score = 60.0 bits (30), Expect = 8e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 453 tttttaatatatggtaagactggatggattggtggtctactcgggaagatatgtgagaag 512 ||||| || |||||||||||||| ||| |||||||||| || ||||| ||||||||||| Sbjct: 723 tttttgatctatggtaagactggttggcttggtggtcttctagggaaactatgtgagaag 782 Query: 513 ca 514 || Sbjct: 783 ca 784
>gb|AC024260.4|AC024260 Arabidopsis thaliana chromosome 1 BAC F22G10 genomic sequence, complete sequence Length = 111936 Score = 83.8 bits (42), Expect = 6e-13 Identities = 138/170 (81%) Strand = Plus / Plus Query: 126 gagaacaggcccttcaatgaccagtggtacttcctggatgatcagaaactgaagaagttg 185 |||||| ||||||| ||||| || |||||||||| ||||||||||| |||||||| ||| Sbjct: 103792 gagaaccggccctttaatgatcaaaggtacttccttgatgatcagaagctgaagaaattg 103851 Query: 186 ggataggcagagcgcacaacatgggaagagggtttgaagaaaacaattgaatggtacaca 245 || | | |||||| |||| |||||||| || |||||||| ||||| || |||||||| Sbjct: 103852 gggtggcaagagcgaacaaattgggaagatggattgaagaagacaatggactggtacact 103911 Query: 246 agtaatcctgagtactggggcgatgttgccggtgcattgctccctcatcc 295 |||||||||| ||||| |||||| | || || ||||| |||||||| Sbjct: 103912 cagaatcctgagtggtggggtgatgtttctggagctttgcttcctcatcc 103961 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 453 tttttaatatatggtaagactggatggattggtggtctactcgggaagatatgtgagaag 512 ||||| || |||||||||||||| ||| |||||||||| || ||||| ||||||||||| Sbjct: 104098 tttttgatctatggtaagactggttggcttggtggtcttctagggaaactatgtgagaag 104157 Query: 513 caa 515 ||| Sbjct: 104158 caa 104160
>gb|AC018748.3|T3F20 Sequence of BAC T3F20 from Arabidopsis thaliana chromosome 1, complete sequence Length = 99960 Score = 83.8 bits (42), Expect = 6e-13 Identities = 138/170 (81%) Strand = Plus / Plus Query: 126 gagaacaggcccttcaatgaccagtggtacttcctggatgatcagaaactgaagaagttg 185 |||||| ||||||| ||||| || |||||||||| ||||||||||| |||||||| ||| Sbjct: 62698 gagaaccggccctttaatgatcaaaggtacttccttgatgatcagaagctgaagaaattg 62757 Query: 186 ggataggcagagcgcacaacatgggaagagggtttgaagaaaacaattgaatggtacaca 245 || | | |||||| |||| |||||||| || |||||||| ||||| || |||||||| Sbjct: 62758 gggtggcaagagcgaacaaattgggaagatggattgaagaagacaatggactggtacact 62817 Query: 246 agtaatcctgagtactggggcgatgttgccggtgcattgctccctcatcc 295 |||||||||| ||||| |||||| | || || ||||| |||||||| Sbjct: 62818 cagaatcctgagtggtggggtgatgtttctggagctttgcttcctcatcc 62867 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 453 tttttaatatatggtaagactggatggattggtggtctactcgggaagatatgtgagaag 512 ||||| || |||||||||||||| ||| |||||||||| || ||||| ||||||||||| Sbjct: 63004 tttttgatctatggtaagactggttggcttggtggtcttctagggaaactatgtgagaag 63063 Query: 513 caa 515 ||| Sbjct: 63064 caa 63066
>gb|BT002264.1| Arabidopsis thaliana At1g53500/F22G10_13 mRNA, complete cds Length = 1497 Score = 83.8 bits (42), Expect = 6e-13 Identities = 138/170 (81%) Strand = Plus / Plus Query: 126 gagaacaggcccttcaatgaccagtggtacttcctggatgatcagaaactgaagaagttg 185 |||||| ||||||| ||||| || |||||||||| ||||||||||| |||||||| ||| Sbjct: 340 gagaaccggccctttaatgatcaaaggtacttccttgatgatcagaagctgaagaaattg 399 Query: 186 ggataggcagagcgcacaacatgggaagagggtttgaagaaaacaattgaatggtacaca 245 || | | |||||| |||| |||||||| || |||||||| ||||| || |||||||| Sbjct: 400 gggtggcaagagcgaacaaattgggaagatggattgaagaagacaatggactggtacact 459 Query: 246 agtaatcctgagtactggggcgatgttgccggtgcattgctccctcatcc 295 |||||||||| ||||| |||||| | || || ||||| |||||||| Sbjct: 460 cagaatcctgagtggtggggtgatgtttctggagctttgcttcctcatcc 509 Score = 60.0 bits (30), Expect = 8e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 453 tttttaatatatggtaagactggatggattggtggtctactcgggaagatatgtgagaag 512 ||||| || |||||||||||||| ||| |||||||||| || ||||| ||||||||||| Sbjct: 646 tttttgatctatggtaagactggttggcttggtggtcttctagggaaactatgtgagaag 705 Query: 513 ca 514 || Sbjct: 706 ca 707
>ref|NM_112340.2| Arabidopsis thaliana RHM3; catalytic AT3G14790 (RHM3) mRNA, complete cds Length = 2332 Score = 65.9 bits (33), Expect = 1e-07 Identities = 141/177 (79%) Strand = Plus / Plus Query: 133 ggcccttcaatgaccagtggtacttcctggatgatcagaaactgaagaagttgggatagg 192 |||| |||||||||||| |||||||||| ||||| ||||| |||||||| || |||| | Sbjct: 1001 ggccattcaatgaccagaggtacttcctcgatgaccagaagctgaagaaattaggatggt 1060 Query: 193 cagagcgcacaacatgggaagagggtttgaagaaaacaattgaatggtacacaagtaatc 252 ||||| || | |||||||| || ||| ||| ||||| |||||||| || || | Sbjct: 1061 gtgagcgaaccaattgggaagaaggactgaggaagacaatggaatggtatactgagaacc 1120 Query: 253 ctgagtactggggcgatgttgccggtgcattgctccctcatccaaggatgttgatga 309 |||||| |||||||||||| | || || |||| ||||||||| |||||||||||| Sbjct: 1121 ctgagtggtggggcgatgtttctggagctctgcttcctcatccacggatgttgatga 1177
>gb|AY142060.1| Arabidopsis thaliana At3g14790/T21E2_4 mRNA, complete cds Length = 1995 Score = 65.9 bits (33), Expect = 1e-07 Identities = 141/177 (79%) Strand = Plus / Plus Query: 133 ggcccttcaatgaccagtggtacttcctggatgatcagaaactgaagaagttgggatagg 192 |||| |||||||||||| |||||||||| ||||| ||||| |||||||| || |||| | Sbjct: 848 ggccattcaatgaccagaggtacttcctcgatgaccagaagctgaagaaattaggatggt 907 Query: 193 cagagcgcacaacatgggaagagggtttgaagaaaacaattgaatggtacacaagtaatc 252 ||||| || | |||||||| || ||| ||| ||||| |||||||| || || | Sbjct: 908 gtgagcgaaccaattgggaagaaggactgaggaagacaatggaatggtatactgagaacc 967 Query: 253 ctgagtactggggcgatgttgccggtgcattgctccctcatccaaggatgttgatga 309 |||||| |||||||||||| | || || |||| ||||||||| |||||||||||| Sbjct: 968 ctgagtggtggggcgatgtttctggagctctgcttcctcatccacggatgttgatga 1024
>gb|AY078958.1| Arabidopsis thaliana AT3g14790/T21E2_4 mRNA, complete cds Length = 2332 Score = 65.9 bits (33), Expect = 1e-07 Identities = 141/177 (79%) Strand = Plus / Plus Query: 133 ggcccttcaatgaccagtggtacttcctggatgatcagaaactgaagaagttgggatagg 192 |||| |||||||||||| |||||||||| ||||| ||||| |||||||| || |||| | Sbjct: 1001 ggccattcaatgaccagaggtacttcctcgatgaccagaagctgaagaaattaggatggt 1060 Query: 193 cagagcgcacaacatgggaagagggtttgaagaaaacaattgaatggtacacaagtaatc 252 ||||| || | |||||||| || ||| ||| ||||| |||||||| || || | Sbjct: 1061 gtgagcgaaccaattgggaagaaggactgaggaagacaatggaatggtatactgagaacc 1120 Query: 253 ctgagtactggggcgatgttgccggtgcattgctccctcatccaaggatgttgatga 309 |||||| |||||||||||| | || || |||| ||||||||| |||||||||||| Sbjct: 1121 ctgagtggtggggcgatgtttctggagctctgcttcctcatccacggatgttgatga 1177
>dbj|AP002061.1| Arabidopsis thaliana genomic DNA, chromosome 3, BAC clone: T21E2 Length = 47466 Score = 65.9 bits (33), Expect = 1e-07 Identities = 141/177 (79%) Strand = Plus / Plus Query: 133 ggcccttcaatgaccagtggtacttcctggatgatcagaaactgaagaagttgggatagg 192 |||| |||||||||||| |||||||||| ||||| ||||| |||||||| || |||| | Sbjct: 9136 ggccattcaatgaccagaggtacttcctcgatgaccagaagctgaagaaattaggatggt 9195 Query: 193 cagagcgcacaacatgggaagagggtttgaagaaaacaattgaatggtacacaagtaatc 252 ||||| || | |||||||| || ||| ||| ||||| |||||||| || || | Sbjct: 9196 gtgagcgaaccaattgggaagaaggactgaggaagacaatggaatggtatactgagaacc 9255 Query: 253 ctgagtactggggcgatgttgccggtgcattgctccctcatccaaggatgttgatga 309 |||||| |||||||||||| | || || |||| ||||||||| |||||||||||| Sbjct: 9256 ctgagtggtggggcgatgtttctggagctctgcttcctcatccacggatgttgatga 9312
>gb|BT014616.1| Lycopersicon esculentum clone 134102R, mRNA sequence Length = 2345 Score = 60.0 bits (30), Expect = 8e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 126 gagaacaggcccttcaatgaccagtggtacttcctggatgatcagaaactgaagaagttg 185 ||||||||||| || |||||||| ||||||| |||||||||||||| ||||||| ||| Sbjct: 956 gagaacaggccgtttaatgaccaaaggtactttctggatgatcagaagttgaagaacttg 1015 Query: 186 gg 187 || Sbjct: 1016 gg 1017
>gb|AC182659.2| Populus trichocarpa clone Pop1-125A14, complete sequence Length = 75970 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 129 aacaggcccttcaatgaccagtggtacttcctggatgatcagaaactgaagaagttggga 188 ||||| || |||||||||||| ||||||| ||||||||||||| ||||| || |||||| Sbjct: 27551 aacagaccattcaatgaccagaggtactttttggatgatcagaagctgaataatttggga 27610 Query: 189 t 189 | Sbjct: 27611 t 27611
>gb|AY108467.1| Zea mays PCO142331 mRNA sequence Length = 1381 Score = 48.1 bits (24), Expect = 0.031 Identities = 84/104 (80%) Strand = Plus / Plus Query: 111 gtcatcaggttcgtcgagaacaggcccttcaatgaccagtggtacttcctggatgatcag 170 ||||||| ||| ||||||||||| || || ||||||||| |||| ||| |||| ||| || Sbjct: 5 gtcatcatgtttgtcgagaacagaccttttaatgaccagaggtatttcttggacgatgag 64 Query: 171 aaactgaagaagttgggataggcagagcgcacaacatgggaaga 214 || || |||| | |||| ||| |||||||| |||||||||| Sbjct: 65 aagctcaagagccttggatgggctgagcgcaccccatgggaaga 108 Score = 44.1 bits (22), Expect = 0.49 Identities = 79/98 (80%) Strand = Plus / Plus Query: 459 atatatggtaagactggatggattggtggtctactcgggaagatatgtgagaagcaaagc 518 |||||||| | ||| |||||||| || || || || ||||| |||||||||||| || | Sbjct: 323 atatatggcaggacaggatggatcggcggacttcttgggaaaatatgtgagaagaaagga 382 Query: 519 ataccttatgaatatggtaaagggcgcctacaagagcg 556 || || ||||||||||| || || ||| | |||||||| Sbjct: 383 attccatatgaatatggaaatggccgcttgcaagagcg 420
>ref|XM_465426.1| Oryza sativa (japonica cultivar-group), mRNA Length = 420 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 24 gtgtataatatcggtactgtgaaggagaggagggtaattgatg 66 |||||| |||||||||||| |||||| || ||||| ||||||| Sbjct: 355 gtgtatcatatcggtactgcgaaggaaagaagggtgattgatg 397
>emb|AL450384.34| Human DNA sequence from clone RP11-383B4 on chromosome 10 Contains the 3' end of the CACNB2 gene for calcium channel voltage-dependent beta 2 subunit, the 5' end of a novel gene, a novel gene and the 3' end of a novel gene (LOC221078) (FLJ23743), complete sequence Length = 124571 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 170 gaaactgaagaagttgggataggcaga 196 ||||||||||||||||||| ||||||| Sbjct: 107113 gaaactgaagaagttgggagaggcaga 107087
>dbj|AK147488.1| Mus musculus cDNA, RIKEN full-length enriched library, clone:M5C1053B05 product:TU12B1-TY protein homolog [Homo sapiens], full insert sequence Length = 5913 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 421 ccagcagtgcccctcagaaggcc 443 ||||||||||||||||||||||| Sbjct: 5631 ccagcagtgcccctcagaaggcc 5653
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Minus Query: 24 gtgtataatatcggtactgtgaaggagaggagggtaattgatg 66 |||||| |||||||||||| |||||| || ||||| ||||||| Sbjct: 4093166 gtgtatcatatcggtactgcgaaggaaagaagggtgattgatg 4093124
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 24 gtgtataatatcggtactgtgaaggagaggagggtaattgatg 66 |||||| |||||||||||| |||||| || ||||| ||||||| Sbjct: 15069346 gtgtatcatatcggtactgcgaaggaaagaagggtgattgatg 15069388
>dbj|AP004816.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0533E11 Length = 150678 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 24 gtgtataatatcggtactgtgaaggagaggagggtaattgatg 66 |||||| |||||||||||| |||||| || ||||| ||||||| Sbjct: 75127 gtgtatcatatcggtactgcgaaggaaagaagggtgattgatg 75169
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Minus Query: 24 gtgtataatatcggtactgtgaaggagaggagggtaattgatg 66 |||||| |||||||||||| |||||| || ||||| ||||||| Sbjct: 4093153 gtgtatcatatcggtactgcgaaggaaagaagggtgattgatg 4093111
>emb|AL928748.4|CNS08CBL Oryza sativa chromosome 12, . BAC OSJNBb0092O07 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 123469 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Minus Query: 24 gtgtataatatcggtactgtgaaggagaggagggtaattgatg 66 |||||| |||||||||||| |||||| || ||||| ||||||| Sbjct: 35562 gtgtatcatatcggtactgcgaaggaaagaagggtgattgatg 35520
>emb|AL731882.2|CNS08C8M Oryza sativa chromosome 12, . BAC OSJNBb0028H07 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132682 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Minus Query: 24 gtgtataatatcggtactgtgaaggagaggagggtaattgatg 66 |||||| |||||||||||| |||||| || ||||| ||||||| Sbjct: 129587 gtgtatcatatcggtactgcgaaggaaagaagggtgattgatg 129545
>ref|XM_522697.1| PREDICTED: Pan troglodytes LOC467299 (LOC467299), mRNA Length = 1419 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 222 aagaaaacaattgaatggtaca 243 |||||||||||||||||||||| Sbjct: 1339 aagaaaacaattgaatggtaca 1360
>ref|XM_416988.1| PREDICTED: Gallus gallus similar to dTDP-D-glucose 4,6-dehydratase (LOC418793), mRNA Length = 2138 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 222 aagaaaacaattgaatggtaca 243 |||||||||||||||||||||| Sbjct: 964 aagaaaacaattgaatggtaca 985
>gb|AC152406.8| Medicago truncatula clone mth2-71o20, complete sequence Length = 114919 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 446 ctacaaatttttaatatatggt 467 |||||||||||||||||||||| Sbjct: 28229 ctacaaatttttaatatatggt 28208
>gb|BC033675.1| Homo sapiens TDP-glucose 4,6-dehydratase, mRNA (cDNA clone MGC:45138 IMAGE:5175390), complete cds Length = 1899 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 222 aagaaaacaattgaatggtaca 243 |||||||||||||||||||||| Sbjct: 1041 aagaaaacaattgaatggtaca 1062
>emb|AJ006068.1|HSA6068 Homo sapiens mRNA for dTDP-D-glucose 4,6-dehydratase Length = 1889 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 222 aagaaaacaattgaatggtaca 243 |||||||||||||||||||||| Sbjct: 1066 aagaaaacaattgaatggtaca 1087
>emb|CR606771.1| full-length cDNA clone CS0DC012YN01 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1677 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 222 aagaaaacaattgaatggtaca 243 |||||||||||||||||||||| Sbjct: 901 aagaaaacaattgaatggtaca 922
>gb|AC124971.15| Medicago truncatula clone mth2-22h8, complete sequence Length = 122754 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 446 ctacaaatttttaatatatggt 467 |||||||||||||||||||||| Sbjct: 104591 ctacaaatttttaatatatggt 104570
>ref|NM_014305.2| Homo sapiens TDP-glucose 4,6-dehydratase (TGDS), mRNA Length = 1952 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 222 aagaaaacaattgaatggtaca 243 |||||||||||||||||||||| Sbjct: 1094 aagaaaacaattgaatggtaca 1115
>gb|AF048686.1|AF048686 Homo sapiens dTDP-glucose 4,6-dehydratase like protein mRNA, complete cds Length = 1868 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 222 aagaaaacaattgaatggtaca 243 |||||||||||||||||||||| Sbjct: 1014 aagaaaacaattgaatggtaca 1035
>gb|AY544125.1| Homo sapiens growth-inhibiting protein 21 mRNA, complete cds Length = 1131 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 222 aagaaaacaattgaatggtaca 243 |||||||||||||||||||||| Sbjct: 989 aagaaaacaattgaatggtaca 1010
>gb|AF260390.1| Ceratium fusus large subunit ribosomal RNA gene, partial sequence Length = 977 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 209 ggaagagggtttgaagaaaacaatt 233 ||||||| ||||||||||||||||| Sbjct: 87 ggaagagcgtttgaagaaaacaatt 63
>gb|AE010300.1| Leptospira interrogans serovar lai str. 56601 chromosome I, complete sequence Length = 4332241 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 342 gaaatcaaatctcttgcttct 362 ||||||||||||||||||||| Sbjct: 386425 gaaatcaaatctcttgcttct 386405
>gb|AC093912.2| Homo sapiens BAC clone RP11-766E1 from 2, complete sequence Length = 194167 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 448 acaaatttttaatatatggta 468 ||||||||||||||||||||| Sbjct: 66857 acaaatttttaatatatggta 66877
>gb|AE016823.1| Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130, chromosome I, complete sequence Length = 4277185 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 342 gaaatcaaatctcttgcttct 362 ||||||||||||||||||||| Sbjct: 385344 gaaatcaaatctcttgcttct 385324
>ref|XM_642484.1| Dictyostelium discoideum hypothetical protein (DDB0189799), partial mRNA Length = 2697 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 222 aagaaaacaattgaatggta 241 |||||||||||||||||||| Sbjct: 39 aagaaaacaattgaatggta 58
>gb|AC133507.4| Mus musculus BAC clone RP24-112C17 from chromosome 13, complete sequence Length = 187080 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 193 cagagcgcacaacatgggaagagg 216 |||||| ||||||||||||||||| Sbjct: 106387 cagagcccacaacatgggaagagg 106364
>gb|AE006403.1| Lactococcus lactis subsp. lactis IL1403 section 165 of 218 of the complete genome Length = 12898 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 501 atatgtgagaagcaaagcat 520 |||||||||||||||||||| Sbjct: 6974 atatgtgagaagcaaagcat 6955
>ref|XM_713578.1| Candida albicans SC5314 phosphoenolpyruvate carboxykinase (CaO19_7514), mRNA Length = 1662 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 aggaaatcaaatctcttgct 359 |||||||||||||||||||| Sbjct: 1565 aggaaatcaaatctcttgct 1584
>gb|AY464108.1| Helleborus orientalis AGAMOUS-like protein mRNA, partial cds Length = 910 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 220 tgaagaaaacaattgaatggtaca 243 ||||||||||||||||| |||||| Sbjct: 119 tgaagaaaacaattgaaaggtaca 142
>ref|XM_742674.1| Aspergillus fumigatus Af293 cytochrome P450 alkane hydroxylase (Afu6g03090) partial mRNA Length = 1515 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 347 caaatctcttgcttcttcgccagc 370 ||||||||| |||||||||||||| Sbjct: 992 caaatctctggcttcttcgccagc 969
>emb|Z49069.1|CEK12D12 Caenorhabditis elegans Cosmid K12D12, complete sequence Length = 14759 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 acttcctggatgatcagaaa 173 |||||||||||||||||||| Sbjct: 10518 acttcctggatgatcagaaa 10499
>gb|AC114563.12| Mus musculus chromosome 7, clone RP23-56E5, complete sequence Length = 166508 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 446 ctacaaatttttaatatatg 465 |||||||||||||||||||| Sbjct: 48828 ctacaaatttttaatatatg 48809
>emb|AL590244.5| Human DNA sequence from clone RP11-28H17 on chromosome 6 Contains the 3' end of a novel gene, part of a novel gene, a novel gene, cytochrome P450 pseudogene and the 3' end of the RHAG gene for Rhesus blood group-associated glycoprotein (RH50A), complete sequence Length = 133579 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 gtgacatatgcaagctattt 92 |||||||||||||||||||| Sbjct: 36852 gtgacatatgcaagctattt 36871
>emb|AL391666.5| Human DNA sequence from clone RP13-130D24 on chromosome Xq21.31-22.1 Contains a karyopherin (importin) beta 1 (KPNB1) pseudogene, complete sequence Length = 147080 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 369 gctgaagccaaggaatgtaacacagtag 396 |||||||||| |||||||||||||||| Sbjct: 116113 gctgaagccagtgaatgtaacacagtag 116140
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 catcaggttcgtcgagaaca 132 |||||||||||||||||||| Sbjct: 2191017 catcaggttcgtcgagaaca 2191036
>emb|AL132792.2|DMBR19J1 Drosophila melanogaster BAC clone BACR19J1 Length = 95463 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 aggatgttgatgacgcctgg 316 |||||||||||||||||||| Sbjct: 28895 aggatgttgatgacgcctgg 28876
>gb|AC103548.8| Drosophila melanogaster X BAC RP98-19J1 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 182490 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 aggatgttgatgacgcctgg 316 |||||||||||||||||||| Sbjct: 40358 aggatgttgatgacgcctgg 40339
>gb|AF510656.1| Avian infectious bronchitis virus isolate AL/6609/98 S1 glycoprotein gene, partial cds Length = 1647 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 tccaatagcaccagcagtgc 430 |||||||||||||||||||| Sbjct: 210 tccaatagcaccagcagtgc 191
>gb|AF419314.1|AF419314 Avian infectious bronchitis virus isolate PA/171/99 S1 surface glycoprotein (S1) gene, partial cds Length = 1630 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 tccaatagcaccagcagtgc 430 |||||||||||||||||||| Sbjct: 201 tccaatagcaccagcagtgc 182
>dbj|AK005173.1| Mus musculus adult male cerebellum cDNA, RIKEN full-length enriched library, clone:1500006G06 product:unclassifiable, full insert sequence Length = 758 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 428 tgcccctcagaaggccacct 447 |||||||||||||||||||| Sbjct: 432 tgcccctcagaaggccacct 451
>ref|NM_064133.2| Caenorhabditis elegans Nuclear Pore complex Protein family member (npp-3) (npp-3) mRNA, complete cds Length = 5256 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 154 acttcctggatgatcagaaa 173 |||||||||||||||||||| Sbjct: 1142 acttcctggatgatcagaaa 1161
>gb|AF305595.1|AF305595 Avian infectious bronchitis virus isolate PA/Wolgemuth/98 spike glycoprotein S1 subunit gene, partial cds Length = 1629 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 tccaatagcaccagcagtgc 430 |||||||||||||||||||| Sbjct: 204 tccaatagcaccagcagtgc 185
>gb|AC006385.3|AC006385 Homo sapiens BAC clone RP11-559J5 from 2, complete sequence Length = 173508 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 tggatgatcagaaactgaag 179 |||||||||||||||||||| Sbjct: 41388 tggatgatcagaaactgaag 41369
>dbj|AB017071.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MSJ11 Length = 81370 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 326 gcataactggactgaggaaa 345 |||||||||||||||||||| Sbjct: 8255 gcataactggactgaggaaa 8274
>gb|AE003418.4| Drosophila melanogaster chromosome X, section 2 of 74 of the complete sequence Length = 315092 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 aggatgttgatgacgcctgg 316 |||||||||||||||||||| Sbjct: 178363 aggatgttgatgacgcctgg 178344
>gb|AC154010.3| Mus musculus 6 BAC RP24-493P16 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 213098 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 actgtgaaggagaggagggt 58 |||||||||||||||||||| Sbjct: 80545 actgtgaaggagaggagggt 80564
>gb|U70473.1|CAU70473 Candida albicans PEP carboxykinase (PCK1) gene, complete cds Length = 3346 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 aggaaatcaaatctcttgct 359 |||||||||||||||||||| Sbjct: 2999 aggaaatcaaatctcttgct 3018
>gb|AY789945.1| Avian infectious bronchitis virus strain PA/5083/99 S1 surface glycoprotein gene, partial cds Length = 1635 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 tccaatagcaccagcagtgc 430 |||||||||||||||||||| Sbjct: 204 tccaatagcaccagcagtgc 185
>gb|AY789944.1| Avian infectious bronchitis virus strain PA/4327/97 B S1 surface glycoprotein gene, partial cds Length = 1618 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 tccaatagcaccagcagtgc 430 |||||||||||||||||||| Sbjct: 204 tccaatagcaccagcagtgc 185
>gb|AY789943.1| Avian infectious bronchitis virus strain PA/4327/97 A S1 surface glycoprotein gene, partial cds Length = 1610 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 tccaatagcaccagcagtgc 430 |||||||||||||||||||| Sbjct: 204 tccaatagcaccagcagtgc 185
>gb|AY789938.1| Avian infectious bronchitis virus strain MD/106/00 S1 surface glycoprotein gene, partial cds Length = 544 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 tccaatagcaccagcagtgc 430 |||||||||||||||||||| Sbjct: 63 tccaatagcaccagcagtgc 44
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 gggaggaggttggacacgtg 26 |||||||||||||||||||| Sbjct: 3847536 gggaggaggttggacacgtg 3847555
>emb|AL772257.7| Mouse DNA sequence from clone RP23-238I12 on chromosome 4, complete sequence Length = 171815 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 449 caaatttttaatatatggtaagac 472 |||||||||||||||||| ||||| Sbjct: 102609 caaatttttaatatatggaaagac 102586 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,452,602 Number of Sequences: 3902068 Number of extensions: 5452602 Number of successful extensions: 107034 Number of sequences better than 10.0: 80 Number of HSP's better than 10.0 without gapping: 80 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 106676 Number of HSP's gapped (non-prelim): 344 length of query: 561 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 538 effective length of database: 17,143,297,704 effective search space: 9223094164752 effective search space used: 9223094164752 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)