No.
Definition
Score (bits)
E Value
1 ref|XM_482597.1| Oryza sativa (japonica cultivar-group), mRNA
688
0.0
2 dbj|AK071371.1| Oryza sativa (japonica cultivar-group) cDNA clon...
424
e-115
3 gb|BT024065.1| Zea mays clone EL01N0446H04 mRNA sequence
377
e-101
4 dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D...
176
5e-41
5 dbj|AP005159.3| Oryza sativa (japonica cultivar-group) genomic D...
176
5e-41
6 dbj|AP004702.3| Oryza sativa (japonica cultivar-group) genomic D...
176
5e-41
7 dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D...
129
1e-26
8 dbj|AP005636.2| Oryza sativa (japonica cultivar-group) genomic D...
129
1e-26
9 dbj|AP005784.3| Oryza sativa (japonica cultivar-group) genomic D...
129
1e-26
10 gb|AC165177.2| Zea mays clone ZMMBBb-188L18, complete sequence
105
2e-19
11 gb|AC165267.2| Zea mays clone ZMMBBb-151F20, complete sequence
105
2e-19
12 dbj|AK065250.1| Oryza sativa (japonica cultivar-group) cDNA clon...
76
1e-10
13 ref|NM_196416.1| Oryza sativa (japonica cultivar-group) putative...
74
6e-10
14 ref|NM_179694.2| Arabidopsis thaliana 6-phosphofructokinase AT2G...
66
1e-07
15 gb|AY096578.1| Arabidopsis thaliana putative pyrophosphate-fruct...
66
1e-07
16 gb|AY070402.1| Arabidopsis thaliana putative pyrophosphate-fruct...
66
1e-07
17 emb|BX820956.1|CNS0A8K5 Arabidopsis thaliana Full-length cDNA Co...
66
1e-07
18 emb|BX842276.1|CNS0A001 Arabidopsis thaliana Full-length cDNA Co...
66
1e-07
19 emb|BX820729.1|CNS0A8RK Arabidopsis thaliana Full-length cDNA Co...
58
3e-05
20 ref|XM_550650.1| Oryza sativa (japonica cultivar-group), mRNA
54
5e-04
21 gb|AC006592.6| Arabidopsis thaliana chromosome 2 clone F14M13 ma...
52
0.002
22 emb|BX821967.1|CNS0A8B3 Arabidopsis thaliana Full-length cDNA Co...
52
0.002
23 gb|AC021893.18|AC021893 Genomic Sequence for Oryza sativa, Nippo...
48
0.032
24 dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D...
48
0.032
25 gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome...
48
0.032
26 gb|AC132032.1| Homo sapiens 3 BAC RP11-4H14 (Roswell Park Cancer...
44
0.49
27 gb|AC170870.2| Mus musculus BAC clone RP24-303O21 from chromosom...
44
0.49
28 emb|BX572101.1| Prochlorococcus marinus MIT9313 complete genome;...
42
2.0
29 gb|AC008896.6| Homo sapiens chromosome 5 clone CTD-2235B13, comp...
42
2.0
30 gb|AC140478.2| Mus musculus BAC clone RP24-149A3 from chromosome...
40
7.7
31 ref|XM_816014.1| Trypanosoma cruzi strain CL Brener hypothetical...
40
7.7
32 ref|XM_799104.1| Trypanosoma cruzi strain CL Brener hypothetical...
40
7.7
33 gb|AC102472.7| Mus musculus, clone RP24-380G1, complete sequence
40
7.7
34 emb|BX927151.1| Corynebacterium glutamicum ATCC 13032, IS finger...
40
7.7
35 gb|AC161890.4| Mus musculus 6 BAC RP23-356P12 (Roswell Park Canc...
40
7.7
36 gb|DQ272062.1| Mustela vison clone XIV4O22 microsatellite sequence
40
7.7
37 gb|J00922.1|CHKY Gallus gallus ovalbumin (oval-Y) gene, complete...
40
7.7
38 gb|AC022302.7|AC022302 Homo sapiens chromosome 15 clone CTD-2019...
40
7.7
39 dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D...
40
7.7
40 gb|AC154685.2| Mus musculus BAC clone RP24-321G16 from chromosom...
40
7.7
41 dbj|BA000036.3| Corynebacterium glutamicum ATCC 13032 DNA, compl...
40
7.7
42 ref|XM_580031.1| PREDICTED: Rattus norvegicus LOC499910 (LOC4999...
40
7.7
43 ref|XM_580030.1| PREDICTED: Rattus norvegicus LOC499907 (LOC4999...
40
7.7
44 dbj|AP004806.3| Oryza sativa (japonica cultivar-group) genomic D...
40
7.7
45 dbj|AP006554.2| Oryza sativa (japonica cultivar-group) genomic D...
40
7.7
46 emb|AL929210.4| Zebrafish DNA sequence from clone CH211-142E15, ...
40
7.7
47 dbj|AK072857.1| Oryza sativa (japonica cultivar-group) cDNA clon...
40
7.7
48 dbj|AK063963.1| Oryza sativa (japonica cultivar-group) cDNA clon...
40
7.7
49 gb|AC159826.1| Gallus gallus BAC clone CH261-57J20 from chromoso...
40
7.7
50 gb|AC157662.2| Gallus gallus BAC clone CH261-183P12 from chromos...
40
7.7
51 gb|AC172879.1| Brassica rapa subsp. pekinensis clone KBrH070I10,...
40
7.7
52 gb|DQ248862.1| Corynebacterium glutamicum 6-phosphofructokinase ...
40
7.7
>dbj|AP008214.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
sequence
Length = 28434780
Score = 176 bits (89), Expect = 5e-41
Identities = 113/121 (93%)
Strand = Plus / Minus
Query: 428 aggcacgcagtgcataccatggtatcggcttggtcaaattaatgggaagaagcagtggtt 487
||||||| || ||||||||||| || || ||||||||||||||||||||||||||||| |
Sbjct: 21318901 aggcacgaagcgcataccatggcattggtttggtcaaattaatgggaagaagcagtggct 21318842
Query: 488 tcattgcaatgcatgcttctctttcaagtgggcaggttgatgtctgcttaataccagagg 547
||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||
Sbjct: 21318841 tcattgcaatgcatgcttccctttcaagtgggcaggttgatgtctgtttaataccagagg 21318782
Query: 548 t 548
|
Sbjct: 21318781 t 21318781
Score = 174 bits (88), Expect = 2e-40
Identities = 130/144 (90%)
Strand = Plus / Minus
Query: 287 agtgccgtaaaagaaagctcaaggtttccgttgtagcagttccaaagaccattgacaatg 346
||||||| || |||||||| || ||||| ||||||||||||||||||||||| |||||||
Sbjct: 21319135 agtgccggaagagaaagctaaaagtttcagttgtagcagttccaaagaccatcgacaatg 21319076
Query: 347 atatacctttaatggacaaaacatttggtttcgataccgcggtggaagaagctcaacggg 406
|||||| ||| |||||||||||||||||||||||||| || || ||||||||||| ||||
Sbjct: 21319075 atatacttttgatggacaaaacatttggtttcgatacggctgttgaagaagctcagcggg 21319016
Query: 407 ccattaactctgcctatatagagg 430
||||||| ||||| ||||||||||
Sbjct: 21319015 ccattaattctgcatatatagagg 21318992
Score = 141 bits (71), Expect = 3e-30
Identities = 95/103 (92%)
Strand = Plus / Minus
Query: 112 ctttcacgtaatctagtggagaatattaatcttgctggtggaagttttcttggagtctcc 171
||||||||| |||| |||||||| || ||||||||||||||||||||||| ||||||||
Sbjct: 21319611 ctttcacgtcatctggtggagaacataaatcttgctggtggaagttttctaggagtctct 21319552
Query: 172 cgtggaggacctaaaactagtgaaattgtagatagtatacagg 214
||||||||| ||||||||||||| |||||||||||||||||||
Sbjct: 21319551 cgtggaggagctaaaactagtgagattgtagatagtatacagg 21319509
Score = 121 bits (61), Expect = 3e-24
Identities = 70/73 (95%)
Strand = Plus / Minus
Query: 212 aggccagaagaattgatatgctttttgtacttggtggaaatggtacccatgcaggagcaa 271
||||||||||||||||||||||||| || ||||| |||||||||||||||||||||||||
Sbjct: 21319414 aggccagaagaattgatatgcttttcgtgcttggaggaaatggtacccatgcaggagcaa 21319355
Query: 272 atgctatccatga 284
|||||||||||||
Sbjct: 21319354 atgctatccatga 21319342
Score = 81.8 bits (41), Expect = 2e-12
Identities = 70/77 (90%), Gaps = 2/77 (2%)
Strand = Plus / Minus
Query: 35 tatggggttaagnaatattgtcgggnattccatttggttttcgtggattttatgaaaaag 94
|||||||||||| |||||||| ||| ||||||||||||| ||||||||||| |||||| |
Sbjct: 21319771 tatggggttaag-aatattgttggg-attccatttggttatcgtggattttttgaaaagg 21319714
Query: 95 gtctaaaagaaatgcca 111
| |||||||||||||||
Sbjct: 21319713 gcctaaaagaaatgcca 21319697
>dbj|AP005159.3 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
clone:OSJNBa0016C11
Length = 170723
Score = 176 bits (89), Expect = 5e-41
Identities = 113/121 (93%)
Strand = Plus / Minus
Query: 428 aggcacgcagtgcataccatggtatcggcttggtcaaattaatgggaagaagcagtggtt 487
||||||| || ||||||||||| || || ||||||||||||||||||||||||||||| |
Sbjct: 145178 aggcacgaagcgcataccatggcattggtttggtcaaattaatgggaagaagcagtggct 145119
Query: 488 tcattgcaatgcatgcttctctttcaagtgggcaggttgatgtctgcttaataccagagg 547
||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||
Sbjct: 145118 tcattgcaatgcatgcttccctttcaagtgggcaggttgatgtctgtttaataccagagg 145059
Query: 548 t 548
|
Sbjct: 145058 t 145058
Score = 174 bits (88), Expect = 2e-40
Identities = 130/144 (90%)
Strand = Plus / Minus
Query: 287 agtgccgtaaaagaaagctcaaggtttccgttgtagcagttccaaagaccattgacaatg 346
||||||| || |||||||| || ||||| ||||||||||||||||||||||| |||||||
Sbjct: 145412 agtgccggaagagaaagctaaaagtttcagttgtagcagttccaaagaccatcgacaatg 145353
Query: 347 atatacctttaatggacaaaacatttggtttcgataccgcggtggaagaagctcaacggg 406
|||||| ||| |||||||||||||||||||||||||| || || ||||||||||| ||||
Sbjct: 145352 atatacttttgatggacaaaacatttggtttcgatacggctgttgaagaagctcagcggg 145293
Query: 407 ccattaactctgcctatatagagg 430
||||||| ||||| ||||||||||
Sbjct: 145292 ccattaattctgcatatatagagg 145269
Score = 141 bits (71), Expect = 3e-30
Identities = 95/103 (92%)
Strand = Plus / Minus
Query: 112 ctttcacgtaatctagtggagaatattaatcttgctggtggaagttttcttggagtctcc 171
||||||||| |||| |||||||| || ||||||||||||||||||||||| ||||||||
Sbjct: 145888 ctttcacgtcatctggtggagaacataaatcttgctggtggaagttttctaggagtctct 145829
Query: 172 cgtggaggacctaaaactagtgaaattgtagatagtatacagg 214
||||||||| ||||||||||||| |||||||||||||||||||
Sbjct: 145828 cgtggaggagctaaaactagtgagattgtagatagtatacagg 145786
Score = 121 bits (61), Expect = 3e-24
Identities = 70/73 (95%)
Strand = Plus / Minus
Query: 212 aggccagaagaattgatatgctttttgtacttggtggaaatggtacccatgcaggagcaa 271
||||||||||||||||||||||||| || ||||| |||||||||||||||||||||||||
Sbjct: 145691 aggccagaagaattgatatgcttttcgtgcttggaggaaatggtacccatgcaggagcaa 145632
Query: 272 atgctatccatga 284
|||||||||||||
Sbjct: 145631 atgctatccatga 145619
Score = 81.8 bits (41), Expect = 2e-12
Identities = 70/77 (90%), Gaps = 2/77 (2%)
Strand = Plus / Minus
Query: 35 tatggggttaagnaatattgtcgggnattccatttggttttcgtggattttatgaaaaag 94
|||||||||||| |||||||| ||| ||||||||||||| ||||||||||| |||||| |
Sbjct: 146048 tatggggttaag-aatattgttggg-attccatttggttatcgtggattttttgaaaagg 145991
Query: 95 gtctaaaagaaatgcca 111
| |||||||||||||||
Sbjct: 145990 gcctaaaagaaatgcca 145974
>dbj|AP004702.3 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
clone:P0524F03
Length = 167696
Score = 176 bits (89), Expect = 5e-41
Identities = 113/121 (93%)
Strand = Plus / Minus
Query: 428 aggcacgcagtgcataccatggtatcggcttggtcaaattaatgggaagaagcagtggtt 487
||||||| || ||||||||||| || || ||||||||||||||||||||||||||||| |
Sbjct: 18826 aggcacgaagcgcataccatggcattggtttggtcaaattaatgggaagaagcagtggct 18767
Query: 488 tcattgcaatgcatgcttctctttcaagtgggcaggttgatgtctgcttaataccagagg 547
||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||
Sbjct: 18766 tcattgcaatgcatgcttccctttcaagtgggcaggttgatgtctgtttaataccagagg 18707
Query: 548 t 548
|
Sbjct: 18706 t 18706
Score = 174 bits (88), Expect = 2e-40
Identities = 130/144 (90%)
Strand = Plus / Minus
Query: 287 agtgccgtaaaagaaagctcaaggtttccgttgtagcagttccaaagaccattgacaatg 346
||||||| || |||||||| || ||||| ||||||||||||||||||||||| |||||||
Sbjct: 19060 agtgccggaagagaaagctaaaagtttcagttgtagcagttccaaagaccatcgacaatg 19001
Query: 347 atatacctttaatggacaaaacatttggtttcgataccgcggtggaagaagctcaacggg 406
|||||| ||| |||||||||||||||||||||||||| || || ||||||||||| ||||
Sbjct: 19000 atatacttttgatggacaaaacatttggtttcgatacggctgttgaagaagctcagcggg 18941
Query: 407 ccattaactctgcctatatagagg 430
||||||| ||||| ||||||||||
Sbjct: 18940 ccattaattctgcatatatagagg 18917
Score = 141 bits (71), Expect = 3e-30
Identities = 95/103 (92%)
Strand = Plus / Minus
Query: 112 ctttcacgtaatctagtggagaatattaatcttgctggtggaagttttcttggagtctcc 171
||||||||| |||| |||||||| || ||||||||||||||||||||||| ||||||||
Sbjct: 19536 ctttcacgtcatctggtggagaacataaatcttgctggtggaagttttctaggagtctct 19477
Query: 172 cgtggaggacctaaaactagtgaaattgtagatagtatacagg 214
||||||||| ||||||||||||| |||||||||||||||||||
Sbjct: 19476 cgtggaggagctaaaactagtgagattgtagatagtatacagg 19434
Score = 121 bits (61), Expect = 3e-24
Identities = 70/73 (95%)
Strand = Plus / Minus
Query: 212 aggccagaagaattgatatgctttttgtacttggtggaaatggtacccatgcaggagcaa 271
||||||||||||||||||||||||| || ||||| |||||||||||||||||||||||||
Sbjct: 19339 aggccagaagaattgatatgcttttcgtgcttggaggaaatggtacccatgcaggagcaa 19280
Query: 272 atgctatccatga 284
|||||||||||||
Sbjct: 19279 atgctatccatga 19267
Score = 81.8 bits (41), Expect = 2e-12
Identities = 70/77 (90%), Gaps = 2/77 (2%)
Strand = Plus / Minus
Query: 35 tatggggttaagnaatattgtcgggnattccatttggttttcgtggattttatgaaaaag 94
|||||||||||| |||||||| ||| ||||||||||||| ||||||||||| |||||| |
Sbjct: 19696 tatggggttaag-aatattgttggg-attccatttggttatcgtggattttttgaaaagg 19639
Query: 95 gtctaaaagaaatgcca 111
| |||||||||||||||
Sbjct: 19638 gcctaaaagaaatgcca 19622
>dbj|AP008215.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
sequence
Length = 22696651
Score = 129 bits (65), Expect = 1e-26
Identities = 107/121 (88%)
Strand = Plus / Minus
Query: 428 aggcacgcagtgcataccatggtatcggcttggtcaaattaatgggaagaagcagtggtt 487
||||||| |||||||| ||||| || || ||||||||||||||||||||||| ||||| |
Sbjct: 14818255 aggcacgaagtgcatatcatggaattgggttggtcaaattaatgggaagaagtagtgggt 14818196
Query: 488 tcattgcaatgcatgcttctctttcaagtgggcaggttgatgtctgcttaataccagagg 547
||||||| ||||| ||||||||||| ||||| ||| ||||||||||| ||||||| ||||
Sbjct: 14818195 tcattgccatgcaagcttctctttccagtggacagattgatgtctgcctaatacccgagg 14818136
Query: 548 t 548
|
Sbjct: 14818135 t 14818135
Score = 113 bits (57), Expect = 6e-22
Identities = 69/73 (94%)
Strand = Plus / Minus
Query: 212 aggccagaagaattgatatgctttttgtacttggtggaaatggtacccatgcaggagcaa 271
||||||||||||||||||||||||||||| |||||||||| |||| |||||||||||| |
Sbjct: 14819041 aggccagaagaattgatatgctttttgtaattggtggaaacggtagccatgcaggagcta 14818982
Query: 272 atgctatccatga 284
|||||||||||||
Sbjct: 14818981 atgctatccatga 14818969
Score = 87.7 bits (44), Expect = 4e-14
Identities = 119/144 (82%)
Strand = Plus / Minus
Query: 287 agtgccgtaaaagaaagctcaaggtttccgttgtagcagttccaaagaccattgacaatg 346
|||| ||||| ||||| || || || || |||||||||||||||||||| ||||| ||||
Sbjct: 14818477 agtgtcgtaagagaaaactgaaagtgtcagttgtagcagttccaaagacaattgataatg 14818418
Query: 347 atatacctttaatggacaaaacatttggtttcgataccgcggtggaagaagctcaacggg 406
|||||| || ||||| || || |||||||| || || || || ||||||||||| || |
Sbjct: 14818417 atatactattcatggataagacttttggttttgacacggctgtagaagaagctcagcgtg 14818358
Query: 407 ccattaactctgcctatatagagg 430
|||| || |||||||| |||||||
Sbjct: 14818357 ccatcaattctgcctacatagagg 14818334
Score = 73.8 bits (37), Expect = 6e-10
Identities = 85/101 (84%)
Strand = Plus / Minus
Query: 112 ctttcacgtaatctagtggagaatattaatcttgctggtggaagttttcttggagtctcc 171
||||||||||| | ||||| || || |||||| ||||||||||||| || || || ||
Sbjct: 14819236 ctttcacgtaaagtggtggaaaacataaatctttctggtggaagtttcctaggtgtgtct 14819177
Query: 172 cgtggaggacctaaaactagtgaaattgtagatagtataca 212
||||||||| ||||||||||||| || || |||||||||||
Sbjct: 14819176 cgtggaggagctaaaactagtgagatcgtcgatagtataca 14819136
Score = 48.1 bits (24), Expect = 0.032
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 67 tttggttttcgtggattttatgaaaaaggtctaaaagaaatgcc 110
||||||| ||||||||||| ||| ||||| |||||||||||||
Sbjct: 14819362 tttggttatcgtggattttttgagaaaggcttaaaagaaatgcc 14819319
>dbj|AP005636.2 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
clone:P0707C02
Length = 163609
Score = 129 bits (65), Expect = 1e-26
Identities = 107/121 (88%)
Strand = Plus / Minus
Query: 428 aggcacgcagtgcataccatggtatcggcttggtcaaattaatgggaagaagcagtggtt 487
||||||| |||||||| ||||| || || ||||||||||||||||||||||| ||||| |
Sbjct: 103644 aggcacgaagtgcatatcatggaattgggttggtcaaattaatgggaagaagtagtgggt 103585
Query: 488 tcattgcaatgcatgcttctctttcaagtgggcaggttgatgtctgcttaataccagagg 547
||||||| ||||| ||||||||||| ||||| ||| ||||||||||| ||||||| ||||
Sbjct: 103584 tcattgccatgcaagcttctctttccagtggacagattgatgtctgcctaatacccgagg 103525
Query: 548 t 548
|
Sbjct: 103524 t 103524
Score = 113 bits (57), Expect = 6e-22
Identities = 69/73 (94%)
Strand = Plus / Minus
Query: 212 aggccagaagaattgatatgctttttgtacttggtggaaatggtacccatgcaggagcaa 271
||||||||||||||||||||||||||||| |||||||||| |||| |||||||||||| |
Sbjct: 104430 aggccagaagaattgatatgctttttgtaattggtggaaacggtagccatgcaggagcta 104371
Query: 272 atgctatccatga 284
|||||||||||||
Sbjct: 104370 atgctatccatga 104358
Score = 87.7 bits (44), Expect = 4e-14
Identities = 119/144 (82%)
Strand = Plus / Minus
Query: 287 agtgccgtaaaagaaagctcaaggtttccgttgtagcagttccaaagaccattgacaatg 346
|||| ||||| ||||| || || || || |||||||||||||||||||| ||||| ||||
Sbjct: 103866 agtgtcgtaagagaaaactgaaagtgtcagttgtagcagttccaaagacaattgataatg 103807
Query: 347 atatacctttaatggacaaaacatttggtttcgataccgcggtggaagaagctcaacggg 406
|||||| || ||||| || || |||||||| || || || || ||||||||||| || |
Sbjct: 103806 atatactattcatggataagacttttggttttgacacggctgtagaagaagctcagcgtg 103747
Query: 407 ccattaactctgcctatatagagg 430
|||| || |||||||| |||||||
Sbjct: 103746 ccatcaattctgcctacatagagg 103723
Score = 73.8 bits (37), Expect = 6e-10
Identities = 85/101 (84%)
Strand = Plus / Minus
Query: 112 ctttcacgtaatctagtggagaatattaatcttgctggtggaagttttcttggagtctcc 171
||||||||||| | ||||| || || |||||| ||||||||||||| || || || ||
Sbjct: 104625 ctttcacgtaaagtggtggaaaacataaatctttctggtggaagtttcctaggtgtgtct 104566
Query: 172 cgtggaggacctaaaactagtgaaattgtagatagtataca 212
||||||||| ||||||||||||| || || |||||||||||
Sbjct: 104565 cgtggaggagctaaaactagtgagatcgtcgatagtataca 104525
Score = 48.1 bits (24), Expect = 0.032
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 67 tttggttttcgtggattttatgaaaaaggtctaaaagaaatgcc 110
||||||| ||||||||||| ||| ||||| |||||||||||||
Sbjct: 104751 tttggttatcgtggattttttgagaaaggcttaaaagaaatgcc 104708
>dbj|AP005784.3 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
clone:P0014G10
Length = 164147
Score = 129 bits (65), Expect = 1e-26
Identities = 107/121 (88%)
Strand = Plus / Minus
Query: 428 aggcacgcagtgcataccatggtatcggcttggtcaaattaatgggaagaagcagtggtt 487
||||||| |||||||| ||||| || || ||||||||||||||||||||||| ||||| |
Sbjct: 26594 aggcacgaagtgcatatcatggaattgggttggtcaaattaatgggaagaagtagtgggt 26535
Query: 488 tcattgcaatgcatgcttctctttcaagtgggcaggttgatgtctgcttaataccagagg 547
||||||| ||||| ||||||||||| ||||| ||| ||||||||||| ||||||| ||||
Sbjct: 26534 tcattgccatgcaagcttctctttccagtggacagattgatgtctgcctaatacccgagg 26475
Query: 548 t 548
|
Sbjct: 26474 t 26474
Score = 113 bits (57), Expect = 6e-22
Identities = 69/73 (94%)
Strand = Plus / Minus
Query: 212 aggccagaagaattgatatgctttttgtacttggtggaaatggtacccatgcaggagcaa 271
||||||||||||||||||||||||||||| |||||||||| |||| |||||||||||| |
Sbjct: 27380 aggccagaagaattgatatgctttttgtaattggtggaaacggtagccatgcaggagcta 27321
Query: 272 atgctatccatga 284
|||||||||||||
Sbjct: 27320 atgctatccatga 27308
Score = 87.7 bits (44), Expect = 4e-14
Identities = 119/144 (82%)
Strand = Plus / Minus
Query: 287 agtgccgtaaaagaaagctcaaggtttccgttgtagcagttccaaagaccattgacaatg 346
|||| ||||| ||||| || || || || |||||||||||||||||||| ||||| ||||
Sbjct: 26816 agtgtcgtaagagaaaactgaaagtgtcagttgtagcagttccaaagacaattgataatg 26757
Query: 347 atatacctttaatggacaaaacatttggtttcgataccgcggtggaagaagctcaacggg 406
|||||| || ||||| || || |||||||| || || || || ||||||||||| || |
Sbjct: 26756 atatactattcatggataagacttttggttttgacacggctgtagaagaagctcagcgtg 26697
Query: 407 ccattaactctgcctatatagagg 430
|||| || |||||||| |||||||
Sbjct: 26696 ccatcaattctgcctacatagagg 26673
Score = 73.8 bits (37), Expect = 6e-10
Identities = 85/101 (84%)
Strand = Plus / Minus
Query: 112 ctttcacgtaatctagtggagaatattaatcttgctggtggaagttttcttggagtctcc 171
||||||||||| | ||||| || || |||||| ||||||||||||| || || || ||
Sbjct: 27575 ctttcacgtaaagtggtggaaaacataaatctttctggtggaagtttcctaggtgtgtct 27516
Query: 172 cgtggaggacctaaaactagtgaaattgtagatagtataca 212
||||||||| ||||||||||||| || || |||||||||||
Sbjct: 27515 cgtggaggagctaaaactagtgagatcgtcgatagtataca 27475
Score = 48.1 bits (24), Expect = 0.032
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 67 tttggttttcgtggattttatgaaaaaggtctaaaagaaatgcc 110
||||||| ||||||||||| ||| ||||| |||||||||||||
Sbjct: 27701 tttggttatcgtggattttttgagaaaggcttaaaagaaatgcc 27658
>gb|AC165177.2 | Zea mays clone ZMMBBb-188L18, complete sequence
Length = 137852
Score = 105 bits (53), Expect = 2e-19
Identities = 104/121 (85%)
Strand = Plus / Minus
Query: 310 gtttccgttgtagcagttccaaagaccattgacaatgatatacctttaatggacaaaaca 369
||||| |||||||||||||||||||| ||||| |||||||||| ||| ||||| || ||
Sbjct: 15573 gtttcagttgtagcagttccaaagacaattgataatgatatactttttatggataagacg 15514
Query: 370 tttggtttcgataccgcggtggaagaagctcaacgggccattaactctgcctatatagag 429
|||||||| ||||| || || ||||||||||| || || || || |||||||||||||||
Sbjct: 15513 tttggttttgatacagctgtagaagaagctcagcgtgctatcaattctgcctatatagag 15454
Query: 430 g 430
|
Sbjct: 15453 g 15453
Score = 99.6 bits (50), Expect = 1e-17
Identities = 104/122 (85%)
Strand = Plus / Minus
Query: 428 aggcacgcagtgcataccatggtatcggcttggtcaaattaatgggaagaagcagtggtt 487
||||||| ||||||||||| || || || || || ||||||||||||||||| ||||| |
Sbjct: 15344 aggcacgtagtgcataccacggaattgggttagtaaaattaatgggaagaagtagtggat 15285
Query: 488 tcattgcaatgcatgcttctctttcaagtgggcaggttgatgtctgcttaataccagagg 547
|||| || ||||||||||||||||| ||||| ||| ||||||| ||| | ||||| ||||
Sbjct: 15284 tcatagccatgcatgcttctctttccagtggacagattgatgtttgcctgatacctgagg 15225
Query: 548 tc 549
||
Sbjct: 15224 tc 15223
Score = 97.6 bits (49), Expect = 4e-17
Identities = 67/73 (91%)
Strand = Plus / Minus
Query: 212 aggccagaagaattgatatgctttttgtacttggtggaaatggtacccatgcaggagcaa 271
|||||||||||||||| ||||| |||||| ||||||||||||||| |||||||||||| |
Sbjct: 16646 aggccagaagaattgacatgctatttgtaattggtggaaatggtagccatgcaggagcta 16587
Query: 272 atgctatccatga 284
||||||| |||||
Sbjct: 16586 atgctattcatga 16574
Score = 83.8 bits (42), Expect = 6e-13
Identities = 66/74 (89%)
Strand = Plus / Minus
Query: 139 aatcttgctggtggaagttttcttggagtctcccgtggaggacctaaaactagtgaaatt 198
|||||| |||| |||||||| || |||||||| ||||||||| ||||||||||||| |||
Sbjct: 16798 aatctttctggaggaagtttcctaggagtctctcgtggaggagctaaaactagtgagatt 16739
Query: 199 gtagatagtataca 212
|||||||| |||||
Sbjct: 16738 gtagatagcataca 16725
Score = 54.0 bits (27), Expect = 5e-04
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 64 ccatttggttttcgtggattttatgaaaaaggtctaaaagaaatgcc 110
|||||||||| ||||||||||| ||| ||||| |||||||||||||
Sbjct: 16946 ccatttggttatcgtggattttttgagaaaggcttaaaagaaatgcc 16900
>gb|AC165267.2 | Zea mays clone ZMMBBb-151F20, complete sequence
Length = 115478
Score = 105 bits (53), Expect = 2e-19
Identities = 104/121 (85%)
Strand = Plus / Plus
Query: 310 gtttccgttgtagcagttccaaagaccattgacaatgatatacctttaatggacaaaaca 369
||||| |||||||||||||||||||| ||||| |||||||||| ||| ||||| || ||
Sbjct: 10227 gtttcagttgtagcagttccaaagacaattgataatgatatactttttatggataagacg 10286
Query: 370 tttggtttcgataccgcggtggaagaagctcaacgggccattaactctgcctatatagag 429
|||||||| ||||| || || ||||||||||| || || || || |||||||||||||||
Sbjct: 10287 tttggttttgatacagctgtagaagaagctcagcgtgctatcaattctgcctatatagag 10346
Query: 430 g 430
|
Sbjct: 10347 g 10347
Score = 99.6 bits (50), Expect = 1e-17
Identities = 104/122 (85%)
Strand = Plus / Plus
Query: 428 aggcacgcagtgcataccatggtatcggcttggtcaaattaatgggaagaagcagtggtt 487
||||||| ||||||||||| || || || || || ||||||||||||||||| ||||| |
Sbjct: 10456 aggcacgtagtgcataccacggaattgggttagtaaaattaatgggaagaagtagtggat 10515
Query: 488 tcattgcaatgcatgcttctctttcaagtgggcaggttgatgtctgcttaataccagagg 547
|||| || ||||||||||||||||| ||||| ||| ||||||| ||| | ||||| ||||
Sbjct: 10516 tcatagccatgcatgcttctctttccagtggacagattgatgtttgcctgatacctgagg 10575
Query: 548 tc 549
||
Sbjct: 10576 tc 10577
Score = 97.6 bits (49), Expect = 4e-17
Identities = 67/73 (91%)
Strand = Plus / Plus
Query: 212 aggccagaagaattgatatgctttttgtacttggtggaaatggtacccatgcaggagcaa 271
|||||||||||||||| ||||| |||||| ||||||||||||||| |||||||||||| |
Sbjct: 9154 aggccagaagaattgacatgctatttgtaattggtggaaatggtagccatgcaggagcta 9213
Query: 272 atgctatccatga 284
||||||| |||||
Sbjct: 9214 atgctattcatga 9226
Score = 83.8 bits (42), Expect = 6e-13
Identities = 66/74 (89%)
Strand = Plus / Plus
Query: 139 aatcttgctggtggaagttttcttggagtctcccgtggaggacctaaaactagtgaaatt 198
|||||| |||| |||||||| || |||||||| ||||||||| ||||||||||||| |||
Sbjct: 9002 aatctttctggaggaagtttcctaggagtctctcgtggaggagctaaaactagtgagatt 9061
Query: 199 gtagatagtataca 212
|||||||| |||||
Sbjct: 9062 gtagatagcataca 9075
Score = 54.0 bits (27), Expect = 5e-04
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 64 ccatttggttttcgtggattttatgaaaaaggtctaaaagaaatgcc 110
|||||||||| ||||||||||| ||| ||||| |||||||||||||
Sbjct: 8854 ccatttggttatcgtggattttttgagaaaggcttaaaagaaatgcc 8900
>gb|AC021893.18 |AC021893 Genomic Sequence for Oryza sativa, Nipponbare strain, clone
OSJNBa0060A14, from chromosome 10, complete sequence
Length = 151343
Score = 48.1 bits (24), Expect = 0.032
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 131 agaatattaatcttgctggtggaagttt 158
||||||| ||||||||||||||||||||
Sbjct: 28169 agaatatcaatcttgctggtggaagttt 28142
Score = 48.1 bits (24), Expect = 0.032
Identities = 66/80 (82%)
Strand = Plus / Minus
Query: 469 atgggaagaagcagtggtttcattgcaatgcatgcttctctttcaagtgggcaggttgat 528
||||||||||||||||| || || ||||||||||||| || || ||||| || || |||
Sbjct: 27445 atgggaagaagcagtggctttatcacaatgcatgcttccctgtctagtggccaagtagat 27386
Query: 529 gtctgcttaataccagaggt 548
||||| | ||||| |||||
Sbjct: 27385 atctgcctgatacctgaggt 27366
>gb|DQ248862.1 | Corynebacterium glutamicum 6-phosphofructokinase (pfk) gene,
complete cds
Length = 1819
Score = 40.1 bits (20), Expect = 7.7
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 328 ccaaagaccattgacaatga 347
||||||||||||||||||||
Sbjct: 773 ccaaagaccattgacaatga 792
Database: nt
Posted date: May 29, 2006 11:10 AM
Number of letters in database: 3,984,495,279
Number of sequences in database: 917,343
Database: /shigen/export/home/twatanab/db/nt/nt.01
Posted date: May 29, 2006 11:16 AM
Number of letters in database: 3,988,174,986
Number of sequences in database: 835,257
Database: /shigen/export/home/twatanab/db/nt/nt.02
Posted date: May 29, 2006 11:21 AM
Number of letters in database: 3,991,246,324
Number of sequences in database: 771,481
Database: /shigen/export/home/twatanab/db/nt/nt.03
Posted date: May 29, 2006 11:27 AM
Number of letters in database: 3,990,718,311
Number of sequences in database: 977,174
Database: /shigen/export/home/twatanab/db/nt/nt.04
Posted date: May 29, 2006 11:29 AM
Number of letters in database: 1,278,410,368
Number of sequences in database: 400,813
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,986,876
Number of Sequences: 3902068
Number of extensions: 4986876
Number of successful extensions: 86262
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 85945
Number of HSP's gapped (non-prelim): 309
length of query: 569
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 546
effective length of database: 17,143,297,704
effective search space: 9360240546384
effective search space used: 9360240546384
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)