| Clone Name | bags12i15 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_186621.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1763 Score = 256 bits (129), Expect = 7e-65 Identities = 288/341 (84%) Strand = Plus / Plus Query: 246 aggatatggctgatgcactggagcctcttcatcttcttcaaccatgagaatggaaggaac 305 ||||||||||||||||| ||||| | || |||||||| |||||||| || || || || Sbjct: 699 aggatatggctgatgcattggagtatttttatcttctttaaccatgaaaacggcagaaat 758 Query: 306 gggatcatcgacctcttcttccaggacaggtacctgaatgctatccagaccaacgctccc 365 ||||||||||| || ||||||||||| |||||| |||| || |||||||| || || ||| Sbjct: 759 gggatcatcgatctgttcttccaggataggtacttgaacgcaatccagacaaatgcaccc 818 Query: 366 catcttctgaggtaccttgctgctgcagttgttgtcaataagaggagaaggaacatgctt 425 ||||||||||| ||||||||| | |||||||| || || || |||||||||||||||||| Sbjct: 819 catcttctgagataccttgctacagcagttgtcgtgaacaaaaggagaaggaacatgctt 878 Query: 426 aaggagctcatcaaggtcatccagcaggagcagaacatctacaaggatcccatcatcgaa 485 || ||| | || || ||||| |||||||||||| ||| ||||||||||||||||| ||| Sbjct: 879 aaagagttgattaaagtcattcagcaggagcagcacagctacaaggatcccatcactgaa 938 Query: 486 ttcctggagtgcctgtatgtcaagtatgattttgatggcgctcagcagaagctcgtcgag 545 ||| |||| ||| ||||||| || |||||||||||||| || || ||||| ||| | ||| Sbjct: 939 ttcttggaatgcttgtatgttaactatgattttgatggtgcacaacagaaactcatagag 998 Query: 546 tgcgagcaggttatactgaatgatcctttcctgggcaagcg 586 || |||||||| ||| |||||||||||||||| || ||||| Sbjct: 999 tgtgagcaggtcatattgaatgatcctttccttggaaagcg 1039 Score = 79.8 bits (40), Expect = 1e-11 Identities = 91/108 (84%) Strand = Plus / Plus Query: 74 taccgtgctctctgcaccaacagcgagaggagcctcagcgccctctggggcaagcttgcg 133 ||||||||| | ||||| ||||||||||||||| | || ||||| ||||| ||||| || Sbjct: 531 taccgtgctttgtgcacgaacagcgagaggagcttgagtgccctgtggggaaagctggca 590 Query: 134 gcggagatactgatgcagaactgggatgtcgcgcaggaggagctcaac 181 || ||||| ||||||||||||||||||| || | ||| ||||||||| Sbjct: 591 gccgagattttgatgcagaactgggatgttgcactggatgagctcaac 638
>dbj|AK102119.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033084M22, full insert sequence Length = 1828 Score = 256 bits (129), Expect = 7e-65 Identities = 288/341 (84%) Strand = Plus / Plus Query: 246 aggatatggctgatgcactggagcctcttcatcttcttcaaccatgagaatggaaggaac 305 ||||||||||||||||||||||| |||| ||||||| ||||||||| || || || || Sbjct: 686 aggatatggctgatgcactggagtatctttatcttctacaaccatgaaaacggcagaaat 745 Query: 306 gggatcatcgacctcttcttccaggacaggtacctgaatgctatccagaccaacgctccc 365 |||||||| || || ||||||||||| |||||| ||||||| |||||||| || || || Sbjct: 746 gggatcatagatctgttcttccaggagaggtacttgaatgcaatccagacaaatgcacca 805 Query: 366 catcttctgaggtaccttgctgctgcagttgttgtcaataagaggagaaggaacatgctt 425 ||||||||||| ||||||||| | ||||||||||| || || ||||||||||| |||||| Sbjct: 806 catcttctgagataccttgctacagcagttgttgtgaacaaaaggagaaggaatatgctt 865 Query: 426 aaggagctcatcaaggtcatccagcaggagcagaacatctacaaggatcccatcatcgaa 485 |||||| | || || ||||| |||||||||||| ||| ||||||||||||||| | ||| Sbjct: 866 aaggagttgattaaagtcattcagcaggagcagcacagctacaaggatcccattactgaa 925 Query: 486 ttcctggagtgcctgtatgtcaagtatgattttgatggcgctcagcagaagctcgtcgag 545 || ||||| ||| ||| ||| || ||||||||||||||||| || ||||| ||| | | | Sbjct: 926 tttctggaatgcttgtttgttaactatgattttgatggcgcacaacagaaactcataggg 985 Query: 546 tgcgagcaggttatactgaatgatcctttcctgggcaagcg 586 || ||| |||| ||| ||||||||||||||||||| ||||| Sbjct: 986 tgtgaggaggtcatattgaatgatcctttcctgggaaagcg 1026 Score = 79.8 bits (40), Expect = 1e-11 Identities = 91/108 (84%) Strand = Plus / Plus Query: 74 taccgtgctctctgcaccaacagcgagaggagcctcagcgccctctggggcaagcttgcg 133 ||||||||||| ||||| |||| ||||||||| | || ||||| ||||| ||||| || Sbjct: 518 taccgtgctctgtgcacaaacattgagaggagcttgagtgccctgtggggaaagctggca 577 Query: 134 gcggagatactgatgcagaactgggatgtcgcgcaggaggagctcaac 181 || ||||| ||||||||||||||||||| || | ||||||||||||| Sbjct: 578 gctgagattttgatgcagaactgggatgttgcactggaggagctcaac 625
>dbj|AK065461.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013021F09, full insert sequence Length = 1762 Score = 256 bits (129), Expect = 7e-65 Identities = 288/341 (84%) Strand = Plus / Plus Query: 246 aggatatggctgatgcactggagcctcttcatcttcttcaaccatgagaatggaaggaac 305 ||||||||||||||||| ||||| | || |||||||| |||||||| || || || || Sbjct: 698 aggatatggctgatgcattggagtatttttatcttctttaaccatgaaaacggcagaaat 757 Query: 306 gggatcatcgacctcttcttccaggacaggtacctgaatgctatccagaccaacgctccc 365 ||||||||||| || ||||||||||| |||||| |||| || |||||||| || || ||| Sbjct: 758 gggatcatcgatctgttcttccaggataggtacttgaacgcaatccagacaaatgcaccc 817 Query: 366 catcttctgaggtaccttgctgctgcagttgttgtcaataagaggagaaggaacatgctt 425 ||||||||||| ||||||||| | |||||||| || || || |||||||||||||||||| Sbjct: 818 catcttctgagataccttgctacagcagttgtcgtgaacaaaaggagaaggaacatgctt 877 Query: 426 aaggagctcatcaaggtcatccagcaggagcagaacatctacaaggatcccatcatcgaa 485 || ||| | || || ||||| |||||||||||| ||| ||||||||||||||||| ||| Sbjct: 878 aaagagttgattaaagtcattcagcaggagcagcacagctacaaggatcccatcactgaa 937 Query: 486 ttcctggagtgcctgtatgtcaagtatgattttgatggcgctcagcagaagctcgtcgag 545 ||| |||| ||| ||||||| || |||||||||||||| || || ||||| ||| | ||| Sbjct: 938 ttcttggaatgcttgtatgttaactatgattttgatggtgcacaacagaaactcatagag 997 Query: 546 tgcgagcaggttatactgaatgatcctttcctgggcaagcg 586 || |||||||| ||| |||||||||||||||| || ||||| Sbjct: 998 tgtgagcaggtcatattgaatgatcctttccttggaaagcg 1038 Score = 79.8 bits (40), Expect = 1e-11 Identities = 91/108 (84%) Strand = Plus / Plus Query: 74 taccgtgctctctgcaccaacagcgagaggagcctcagcgccctctggggcaagcttgcg 133 ||||||||| | ||||| ||||||||||||||| | || ||||| ||||| ||||| || Sbjct: 530 taccgtgctttgtgcacgaacagcgagaggagcttgagtgccctgtggggaaagctggca 589 Query: 134 gcggagatactgatgcagaactgggatgtcgcgcaggaggagctcaac 181 || ||||| ||||||||||||||||||| || | ||| ||||||||| Sbjct: 590 gccgagattttgatgcagaactgggatgttgcactggatgagctcaac 637
>gb|AY104837.1| Zea mays PCO126859 mRNA sequence Length = 787 Score = 254 bits (128), Expect = 3e-64 Identities = 239/276 (86%) Strand = Plus / Plus Query: 321 ttcttccaggacaggtacctgaatgctatccagaccaacgctccccatcttctgaggtac 380 |||||||||||||||||| |||||||||| ||||| || |||| |||||||||||| ||| Sbjct: 10 ttcttccaggacaggtacttgaatgctatacagacaaatgctcaccatcttctgagatac 69 Query: 381 cttgctgctgcagttgttgtcaataagaggagaaggaacatgcttaaggagctcatcaag 440 || ||| ||||||||||||| || || ||||||||||| |||||||| ||| | || ||| Sbjct: 70 ctagctactgcagttgttgttaacaaaaggagaaggaatatgcttaaagagttgattaag 129 Query: 441 gtcatccagcaggagcagaacatctacaaggatcccatcatcgaattcctggagtgcctg 500 ||||| |||||||||||| | | ||||||||||||||| | || || ||| | ||| | Sbjct: 130 gtcattcagcaggagcagcatagctacaaggatcccataactgagtttctgcaatgctta 189 Query: 501 tatgtcaagtatgattttgatggcgctcagcagaagctcgtcgagtgcgagcaggttata 560 |||||||| |||||||||||||| ||||| ||||| ||||| ||||| |||||||||||| Sbjct: 190 tatgtcaactatgattttgatggtgctcaacagaaactcgtggagtgtgagcaggttata 249 Query: 561 ctgaatgatcctttcctgggcaagcgtgtcgaagag 596 |||||||||||||||||||||||||| || |||||| Sbjct: 250 ctgaatgatcctttcctgggcaagcgcgttgaagag 285
>ref|XM_478283.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1311 Score = 248 bits (125), Expect = 2e-62 Identities = 296/353 (83%) Strand = Plus / Plus Query: 234 cagctccacagcaggatatggctgatgcactggagcctcttcatcttcttcaaccatgag 293 |||||||| | |||||||||||| |||||||| || ||||||||||||| ||||||| Sbjct: 628 cagctccagaacaggatatggctcatgcactgcagtatcttcatcttctttaaccatgga 687 Query: 294 aatggaaggaacgggatcatcgacctcttcttccaggacaggtacctgaatgctatccag 353 || || || ||||||||||||| || ||||||||||||| |||| ||||||| |||||| Sbjct: 688 aacggcagctacgggatcatcgatctgttcttccaggacaagtacttgaatgcgatccag 747 Query: 354 accaacgctccccatcttctgaggtaccttgctgctgcagttgttgtcaataagaggaga 413 || | || || ||||||||||| ||||||||||| ||| ||||||| || | |||||| Sbjct: 748 acagatgcaccacatcttctgagataccttgctgcagcaattgttgtgaacagaaggaga 807 Query: 414 aggaacatgcttaaggagctcatcaaggtcatccagcaggagcagaacatctacaaggat 473 ||||| |||||||| ||| | | || ||||| || ||||||||| ||| |||||||||| Sbjct: 808 aggaatatgcttaaagagttggttaaagtcattcaacaggagcagcacagctacaaggat 867 Query: 474 cccatcatcgaattcctggagtgcctgtatgtcaagtatgattttgatggcgctcagcag 533 ||||| | ||||||||||| |||||||| || || |||||||||||||||| || ||| Sbjct: 868 cccattactgaattcctggaatgcctgtacgttaaccatgattttgatggcgcacaacag 927 Query: 534 aagctcgtcgagtgcgagcaggttatactgaatgatcctttcctgggcaagcg 586 || ||| | ||||| |||||||| ||||||||||||||||||||||| ||||| Sbjct: 928 aaactcatagagtgtgagcaggtcatactgaatgatcctttcctgggaaagcg 980 Score = 61.9 bits (31), Expect = 2e-06 Identities = 88/107 (82%) Strand = Plus / Plus Query: 74 taccgtgctctctgcaccaacagcgagaggagcctcagcgccctctggggcaagcttgcg 133 ||||||||||| ||||| | ||||||||||||| | ||||||| ||||| ||||| || Sbjct: 472 taccgtgctctgtgcacgagcagcgagaggagcttgagcgcccagtgggggaagctgtcg 531 Query: 134 gcggagatactgatgcagaactgggatgtcgcgcaggaggagctcaa 180 || ||||| |||| | ||||||||||| || | |||||||||||| Sbjct: 532 gccgagattctgaataacaactgggatgttgcactggaggagctcaa 578
>dbj|AK065761.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013040O19, full insert sequence Length = 2757 Score = 248 bits (125), Expect = 2e-62 Identities = 287/341 (84%) Strand = Plus / Plus Query: 246 aggatatggctgatgcactggagcctcttcatcttcttcaaccatgagaatggaaggaac 305 ||||||||||||||||| ||||| | || |||||||| |||||||| || || || || Sbjct: 1845 aggatatggctgatgcattggagtatttttatcttctttaaccatgaaaacggcagaaat 1904 Query: 306 gggatcatcgacctcttcttccaggacaggtacctgaatgctatccagaccaacgctccc 365 ||||||||||| || ||||||||||| |||||| |||| || |||||||| || || ||| Sbjct: 1905 gggatcatcgatctgttcttccaggataggtacttgaacgcaatccagacaaatgcaccc 1964 Query: 366 catcttctgaggtaccttgctgctgcagttgttgtcaataagaggagaaggaacatgctt 425 ||||||||||| ||||||||| | |||||||| || || || |||||||||||||||| | Sbjct: 1965 catcttctgagataccttgctacagcagttgtcgtgaacaaaaggagaaggaacatgcct 2024 Query: 426 aaggagctcatcaaggtcatccagcaggagcagaacatctacaaggatcccatcatcgaa 485 || ||| | || || ||||| |||||||||||| ||| ||||||||||||||||| ||| Sbjct: 2025 aaagagttgattaaagtcattcagcaggagcagcacagctacaaggatcccatcactgaa 2084 Query: 486 ttcctggagtgcctgtatgtcaagtatgattttgatggcgctcagcagaagctcgtcgag 545 ||| |||| ||| ||||||| || |||||||||||||| || || ||||| ||| | ||| Sbjct: 2085 ttcttggaatgcttgtatgttaactatgattttgatggtgcacaacagaaactcatagag 2144 Query: 546 tgcgagcaggttatactgaatgatcctttcctgggcaagcg 586 || |||||||| ||| |||||||||||||||| || ||||| Sbjct: 2145 tgtgagcaggtcatattgaatgatcctttccttggaaagcg 2185 Score = 79.8 bits (40), Expect = 1e-11 Identities = 91/108 (84%) Strand = Plus / Plus Query: 74 taccgtgctctctgcaccaacagcgagaggagcctcagcgccctctggggcaagcttgcg 133 ||||||||| | ||||| ||||||||||||||| | || ||||| ||||| ||||| || Sbjct: 1677 taccgtgctttgtgcacgaacagcgagaggagcttgagtgccctgtggggaaagctggca 1736 Query: 134 gcggagatactgatgcagaactgggatgtcgcgcaggaggagctcaac 181 || ||||| ||||||||||||||||||| || | ||| ||||||||| Sbjct: 1737 gccgagattttgatgcagaactgggatgttgcactggatgagctcaac 1784
>dbj|AK106535.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-108-B06, full insert sequence Length = 1771 Score = 240 bits (121), Expect = 4e-60 Identities = 287/341 (84%), Gaps = 1/341 (0%) Strand = Plus / Plus Query: 246 aggatatggctgatgcactggagcctcttcatcttcttcaaccatgagaatggaaggaac 305 ||||||||||||||||||||||| |||| ||||||| ||||||||| || || || || Sbjct: 599 aggatatggctgatgcactggagtatctttatcttctacaaccatgaaaacggcagaaat 658 Query: 306 gggatcatcgacctcttcttccaggacaggtacctgaatgctatccagaccaacgctccc 365 |||||||| || || ||||||||||| |||||| ||||||| |||||||| || || || Sbjct: 659 gggatcatagatctgttcttccaggagaggtacttgaatgcaatccagacaaatgcacca 718 Query: 366 catcttctgaggtaccttgctgctgcagttgttgtcaataagaggagaaggaacatgctt 425 ||||||||||| ||||||||| | ||||||||||| || || ||||||||||| |||||| Sbjct: 719 catcttctgagataccttgctacagcagttgttgtgaacaaaaggagaaggaatatgctt 778 Query: 426 aaggagctcatcaaggtcatccagcaggagcagaacatctacaaggatcccatcatcgaa 485 |||||| | || || ||||| ||||||| |||| ||| ||||||||||||||| | ||| Sbjct: 779 aaggagttgattaaagtcattcagcaggggcagcacagctacaaggatcccattactgaa 838 Query: 486 ttcctggagtgcctgtatgtcaagtatgattttgatggcgctcagcagaagctcgtcgag 545 || ||||| ||| ||| ||| || ||||| ||||||||||| || ||||| ||| | ||| Sbjct: 839 tttctggaatgcttgtttgttaactatga-tttgatggcgcacaacagaaactcatagag 897 Query: 546 tgcgagcaggttatactgaatgatcctttcctgggcaagcg 586 || ||| |||| ||| ||||||||||||||||||| ||||| Sbjct: 898 tgtgaggaggtcatattgaatgatcctttcctgggaaagcg 938 Score = 79.8 bits (40), Expect = 1e-11 Identities = 91/108 (84%) Strand = Plus / Plus Query: 74 taccgtgctctctgcaccaacagcgagaggagcctcagcgccctctggggcaagcttgcg 133 ||||||||||| ||||| |||| ||||||||| | || ||||| ||||| ||||| || Sbjct: 431 taccgtgctctgtgcacaaacattgagaggagcttgagtgccctgtggggaaagctggca 490 Query: 134 gcggagatactgatgcagaactgggatgtcgcgcaggaggagctcaac 181 || ||||| ||||||||||||||||||| || | ||||||||||||| Sbjct: 491 gctgagattttgatgcagaactgggatgttgcactggaggagctcaac 538
>gb|AY103633.1| Zea mays PCO126860 mRNA sequence Length = 1106 Score = 236 bits (119), Expect = 7e-59 Identities = 290/347 (83%) Strand = Plus / Plus Query: 234 cagctccacagcaggatatggctgatgcactggagcctcttcatcttcttcaaccatgag 293 |||||||| | |||||||||||||||||| ||| || ||||||||||| |||||||| Sbjct: 694 cagctccagaacaggatatggctgatgcattgggctctgttcatcttctttaaccatgaa 753 Query: 294 aatggaaggaacgggatcatcgacctcttcttccaggacaggtacctgaatgctatccag 353 ||||| || || |||||||| || || |||||||||||||||||| |||||||||| ||| Sbjct: 754 aatggtagaaatgggatcattgatctgttcttccaggacaggtacttgaatgctatacag 813 Query: 354 accaacgctccccatcttctgaggtaccttgctgctgcagttgttgtcaataagaggaga 413 || || || | ||||||| | ||||| || ||| |||||||||||||||| || |||||| Sbjct: 814 acaaatgcacaccatcttattaggtatctagctactgcagttgttgtcaacaaaaggaga 873 Query: 414 aggaacatgcttaaggagctcatcaaggtcatccagcaggagcagaacatctacaaggat 473 ||||| |||||||| ||| | || |||||||| || |||||||| | | |||||||||| Sbjct: 874 aggaatatgcttaaagagttgattaaggtcattcaacaggagcaccatagctacaaggat 933 Query: 474 cccatcatcgaattcctggagtgcctgtatgtcaagtatgattttgatggcgctcagcag 533 ||| | | ||||| |||| ||| | ||||| || |||||||||||||| ||||| ||| Sbjct: 934 cccgtaactgaatttttggaatgcttatatgttaactatgattttgatggtgctcaacag 993 Query: 534 aagctcgtcgagtgcgagcaggttatactgaatgatcctttcctggg 580 || ||| | ||||| ||||||||||||||||||||||| |||||||| Sbjct: 994 aaactcatagagtgtgagcaggttatactgaatgatccattcctggg 1040
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 168 bits (85), Expect = 1e-38 Identities = 190/225 (84%) Strand = Plus / Minus Query: 332 caggtacctgaatgctatccagaccaacgctccccatcttctgaggtaccttgctgctgc 391 ||||||| |||| || |||||||| || || |||||||||||||| ||||||||| | || Sbjct: 6797610 caggtacttgaacgcaatccagacaaatgcaccccatcttctgagataccttgctacagc 6797551 Query: 392 agttgttgtcaataagaggagaaggaacatgcttaaggagctcatcaaggtcatccagca 451 |||||| || || || |||||||||||||||||||| ||| | || || ||||| ||||| Sbjct: 6797550 agttgtcgtgaacaaaaggagaaggaacatgcttaaagagttgattaaagtcattcagca 6797491 Query: 452 ggagcagaacatctacaaggatcccatcatcgaattcctggagtgcctgtatgtcaagta 511 ||||||| ||| ||||||||||||||||| |||||| |||| ||| ||||||| || || Sbjct: 6797490 ggagcagcacagctacaaggatcccatcactgaattcttggaatgcttgtatgttaacta 6797431 Query: 512 tgattttgatggcgctcagcagaagctcgtcgagtgcgagcaggt 556 |||||||||||| || || ||||| ||| | ||||| |||||||| Sbjct: 6797430 tgattttgatggtgcacaacagaaactcatagagtgtgagcaggt 6797386 Score = 161 bits (81), Expect = 3e-36 Identities = 189/225 (84%) Strand = Plus / Plus Query: 332 caggtacctgaatgctatccagaccaacgctccccatcttctgaggtaccttgctgctgc 391 ||||||| ||||||| |||||||| || || || ||||||||||| ||||||||| | || Sbjct: 3629744 caggtacttgaatgcaatccagacaaatgcaccacatcttctgagataccttgctacagc 3629803 Query: 392 agttgttgtcaataagaggagaaggaacatgcttaaggagctcatcaaggtcatccagca 451 ||||||||| || || ||||||||||| |||||||||||| | || || ||||| ||||| Sbjct: 3629804 agttgttgtgaacaaaaggagaaggaatatgcttaaggagttgattaaagtcattcagca 3629863 Query: 452 ggagcagaacatctacaaggatcccatcatcgaattcctggagtgcctgtatgtcaagta 511 ||||||| ||| ||||||||||||||| | ||||| ||||| ||| ||| ||| || || Sbjct: 3629864 ggagcagcacagctacaaggatcccattactgaatttctggaatgcttgtttgttaacta 3629923 Query: 512 tgattttgatggcgctcagcagaagctcgtcgagtgcgagcaggt 556 ||||||||||||||| || ||||| ||| | ||||| ||| |||| Sbjct: 3629924 tgattttgatggcgcacaacagaaactcatagagtgtgaggaggt 3629968 Score = 137 bits (69), Expect = 5e-29 Identities = 186/225 (82%) Strand = Plus / Plus Query: 332 caggtacctgaatgctatccagaccaacgctccccatcttctgaggtaccttgctgctgc 391 ||||||| ||||||| |||||||| | || || ||||||||||| ||||||||||| || Sbjct: 19001219 caggtacttgaatgcgatccagacagatgcaccacatcttctgagataccttgctgcagc 19001278 Query: 392 agttgttgtcaataagaggagaaggaacatgcttaaggagctcatcaaggtcatccagca 451 | ||||||| || | ||||||||||| |||||||| ||| | | || ||||| || || Sbjct: 19001279 aattgttgtgaacagaaggagaaggaatatgcttaaagagttggttaaagtcattcaaca 19001338 Query: 452 ggagcagaacatctacaaggatcccatcatcgaattcctggagtgcctgtatgtcaagta 511 ||||||| ||| ||||||||||||||| | ||||||||||| |||||||| || || | Sbjct: 19001339 ggagcagcacagctacaaggatcccattactgaattcctggaatgcctgtacgttaacca 19001398 Query: 512 tgattttgatggcgctcagcagaagctcgtcgagtgcgagcaggt 556 ||||||||||||||| || ||||| ||| | ||||| |||||||| Sbjct: 19001399 tgattttgatggcgcacaacagaaactcatagagtgtgagcaggt 19001443 Score = 79.8 bits (40), Expect = 1e-11 Identities = 85/100 (85%) Strand = Plus / Plus Query: 234 cagctccacagcaggatatggctgatgcactggagcctcttcatcttcttcaaccatgag 293 |||||||| | |||||||||||| |||||||| || ||||||||||||| ||||||| Sbjct: 19000906 cagctccagaacaggatatggctcatgcactgcagtatcttcatcttctttaaccatgga 19000965 Query: 294 aatggaaggaacgggatcatcgacctcttcttccaggaca 333 || || || ||||||||||||| || ||||||||||||| Sbjct: 19000966 aacggcagctacgggatcatcgatctgttcttccaggaca 19001005 Score = 79.8 bits (40), Expect = 1e-11 Identities = 91/108 (84%) Strand = Plus / Minus Query: 74 taccgtgctctctgcaccaacagcgagaggagcctcagcgccctctggggcaagcttgcg 133 ||||||||| | ||||| ||||||||||||||| | || ||||| ||||| ||||| || Sbjct: 6798451 taccgtgctttgtgcacgaacagcgagaggagcttgagtgccctgtggggaaagctggca 6798392 Query: 134 gcggagatactgatgcagaactgggatgtcgcgcaggaggagctcaac 181 || ||||| ||||||||||||||||||| || | ||| ||||||||| Sbjct: 6798391 gccgagattttgatgcagaactgggatgttgcactggatgagctcaac 6798344 Score = 79.8 bits (40), Expect = 1e-11 Identities = 91/108 (84%) Strand = Plus / Plus Query: 74 taccgtgctctctgcaccaacagcgagaggagcctcagcgccctctggggcaagcttgcg 133 ||||||||||| ||||| |||| ||||||||| | || ||||| ||||| ||||| || Sbjct: 3628878 taccgtgctctgtgcacaaacattgagaggagcttgagtgccctgtggggaaagctggca 3628937 Query: 134 gcggagatactgatgcagaactgggatgtcgcgcaggaggagctcaac 181 || ||||| ||||||||||||||||||| || | ||||||||||||| Sbjct: 3628938 gctgagattttgatgcagaactgggatgttgcactggaggagctcaac 3628985 Score = 77.8 bits (39), Expect = 4e-11 Identities = 78/91 (85%) Strand = Plus / Plus Query: 246 aggatatggctgatgcactggagcctcttcatcttcttcaaccatgagaatggaaggaac 305 ||||||||||||||||||||||| |||| ||||||| ||||||||| || || || || Sbjct: 3629149 aggatatggctgatgcactggagtatctttatcttctacaaccatgaaaacggcagaaat 3629208 Query: 306 gggatcatcgacctcttcttccaggacaggt 336 |||||||| || || ||||||||||| |||| Sbjct: 3629209 gggatcatagatctgttcttccaggagaggt 3629239 Score = 69.9 bits (35), Expect = 9e-09 Identities = 77/91 (84%) Strand = Plus / Minus Query: 246 aggatatggctgatgcactggagcctcttcatcttcttcaaccatgagaatggaaggaac 305 ||||||||||||||||| ||||| | || |||||||| |||||||| || || || || Sbjct: 6798175 aggatatggctgatgcattggagtatttttatcttctttaaccatgaaaacggcagaaat 6798116 Query: 306 gggatcatcgacctcttcttccaggacaggt 336 ||||||||||| || ||||||||||| |||| Sbjct: 6798115 gggatcatcgatctgttcttccaggataggt 6798085 Score = 61.9 bits (31), Expect = 2e-06 Identities = 88/107 (82%) Strand = Plus / Plus Query: 74 taccgtgctctctgcaccaacagcgagaggagcctcagcgccctctggggcaagcttgcg 133 ||||||||||| ||||| | ||||||||||||| | ||||||| ||||| ||||| || Sbjct: 19000632 taccgtgctctgtgcacgagcagcgagaggagcttgagcgcccagtgggggaagctgtcg 19000691 Query: 134 gcggagatactgatgcagaactgggatgtcgcgcaggaggagctcaa 180 || ||||| |||| | ||||||||||| || | |||||||||||| Sbjct: 19000692 gccgagattctgaataacaactgggatgttgcactggaggagctcaa 19000738 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 553 aggttatactgaatgatcctttcctgggcaagcg 586 |||| ||||||||||||||||||||||| ||||| Sbjct: 19001569 aggtcatactgaatgatcctttcctgggaaagcg 19001602 Score = 44.1 bits (22), Expect = 0.53 Identities = 31/34 (91%) Strand = Plus / Plus Query: 553 aggttatactgaatgatcctttcctgggcaagcg 586 |||| ||| ||||||||||||||||||| ||||| Sbjct: 3630432 aggtcatattgaatgatcctttcctgggaaagcg 3630465
>dbj|AP005197.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0592C06 Length = 160071 Score = 168 bits (85), Expect = 1e-38 Identities = 190/225 (84%) Strand = Plus / Minus Query: 332 caggtacctgaatgctatccagaccaacgctccccatcttctgaggtaccttgctgctgc 391 ||||||| |||| || |||||||| || || |||||||||||||| ||||||||| | || Sbjct: 91744 caggtacttgaacgcaatccagacaaatgcaccccatcttctgagataccttgctacagc 91685 Query: 392 agttgttgtcaataagaggagaaggaacatgcttaaggagctcatcaaggtcatccagca 451 |||||| || || || |||||||||||||||||||| ||| | || || ||||| ||||| Sbjct: 91684 agttgtcgtgaacaaaaggagaaggaacatgcttaaagagttgattaaagtcattcagca 91625 Query: 452 ggagcagaacatctacaaggatcccatcatcgaattcctggagtgcctgtatgtcaagta 511 ||||||| ||| ||||||||||||||||| |||||| |||| ||| ||||||| || || Sbjct: 91624 ggagcagcacagctacaaggatcccatcactgaattcttggaatgcttgtatgttaacta 91565 Query: 512 tgattttgatggcgctcagcagaagctcgtcgagtgcgagcaggt 556 |||||||||||| || || ||||| ||| | ||||| |||||||| Sbjct: 91564 tgattttgatggtgcacaacagaaactcatagagtgtgagcaggt 91520 Score = 79.8 bits (40), Expect = 1e-11 Identities = 91/108 (84%) Strand = Plus / Minus Query: 74 taccgtgctctctgcaccaacagcgagaggagcctcagcgccctctggggcaagcttgcg 133 ||||||||| | ||||| ||||||||||||||| | || ||||| ||||| ||||| || Sbjct: 92585 taccgtgctttgtgcacgaacagcgagaggagcttgagtgccctgtggggaaagctggca 92526 Query: 134 gcggagatactgatgcagaactgggatgtcgcgcaggaggagctcaac 181 || ||||| ||||||||||||||||||| || | ||| ||||||||| Sbjct: 92525 gccgagattttgatgcagaactgggatgttgcactggatgagctcaac 92478 Score = 69.9 bits (35), Expect = 9e-09 Identities = 77/91 (84%) Strand = Plus / Minus Query: 246 aggatatggctgatgcactggagcctcttcatcttcttcaaccatgagaatggaaggaac 305 ||||||||||||||||| ||||| | || |||||||| |||||||| || || || || Sbjct: 92309 aggatatggctgatgcattggagtatttttatcttctttaaccatgaaaacggcagaaat 92250 Query: 306 gggatcatcgacctcttcttccaggacaggt 336 ||||||||||| || ||||||||||| |||| Sbjct: 92249 gggatcatcgatctgttcttccaggataggt 92219
>dbj|AP003842.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1641_C04 Length = 134367 Score = 161 bits (81), Expect = 3e-36 Identities = 189/225 (84%) Strand = Plus / Plus Query: 332 caggtacctgaatgctatccagaccaacgctccccatcttctgaggtaccttgctgctgc 391 ||||||| ||||||| |||||||| || || || ||||||||||| ||||||||| | || Sbjct: 99061 caggtacttgaatgcaatccagacaaatgcaccacatcttctgagataccttgctacagc 99120 Query: 392 agttgttgtcaataagaggagaaggaacatgcttaaggagctcatcaaggtcatccagca 451 ||||||||| || || ||||||||||| |||||||||||| | || || ||||| ||||| Sbjct: 99121 agttgttgtgaacaaaaggagaaggaatatgcttaaggagttgattaaagtcattcagca 99180 Query: 452 ggagcagaacatctacaaggatcccatcatcgaattcctggagtgcctgtatgtcaagta 511 ||||||| ||| ||||||||||||||| | ||||| ||||| ||| ||| ||| || || Sbjct: 99181 ggagcagcacagctacaaggatcccattactgaatttctggaatgcttgtttgttaacta 99240 Query: 512 tgattttgatggcgctcagcagaagctcgtcgagtgcgagcaggt 556 ||||||||||||||| || ||||| ||| | ||||| ||| |||| Sbjct: 99241 tgattttgatggcgcacaacagaaactcatagagtgtgaggaggt 99285 Score = 79.8 bits (40), Expect = 1e-11 Identities = 91/108 (84%) Strand = Plus / Plus Query: 74 taccgtgctctctgcaccaacagcgagaggagcctcagcgccctctggggcaagcttgcg 133 ||||||||||| ||||| |||| ||||||||| | || ||||| ||||| ||||| || Sbjct: 98195 taccgtgctctgtgcacaaacattgagaggagcttgagtgccctgtggggaaagctggca 98254 Query: 134 gcggagatactgatgcagaactgggatgtcgcgcaggaggagctcaac 181 || ||||| ||||||||||||||||||| || | ||||||||||||| Sbjct: 98255 gctgagattttgatgcagaactgggatgttgcactggaggagctcaac 98302 Score = 77.8 bits (39), Expect = 4e-11 Identities = 78/91 (85%) Strand = Plus / Plus Query: 246 aggatatggctgatgcactggagcctcttcatcttcttcaaccatgagaatggaaggaac 305 ||||||||||||||||||||||| |||| ||||||| ||||||||| || || || || Sbjct: 98466 aggatatggctgatgcactggagtatctttatcttctacaaccatgaaaacggcagaaat 98525 Query: 306 gggatcatcgacctcttcttccaggacaggt 336 |||||||| || || ||||||||||| |||| Sbjct: 98526 gggatcatagatctgttcttccaggagaggt 98556 Score = 44.1 bits (22), Expect = 0.53 Identities = 31/34 (91%) Strand = Plus / Plus Query: 553 aggttatactgaatgatcctttcctgggcaagcg 586 |||| ||| ||||||||||||||||||| ||||| Sbjct: 99749 aggtcatattgaatgatcctttcctgggaaagcg 99782
>dbj|AP004267.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0039H02 Length = 169162 Score = 161 bits (81), Expect = 3e-36 Identities = 189/225 (84%) Strand = Plus / Plus Query: 332 caggtacctgaatgctatccagaccaacgctccccatcttctgaggtaccttgctgctgc 391 ||||||| ||||||| |||||||| || || || ||||||||||| ||||||||| | || Sbjct: 167694 caggtacttgaatgcaatccagacaaatgcaccacatcttctgagataccttgctacagc 167753 Query: 392 agttgttgtcaataagaggagaaggaacatgcttaaggagctcatcaaggtcatccagca 451 ||||||||| || || ||||||||||| |||||||||||| | || || ||||| ||||| Sbjct: 167754 agttgttgtgaacaaaaggagaaggaatatgcttaaggagttgattaaagtcattcagca 167813 Query: 452 ggagcagaacatctacaaggatcccatcatcgaattcctggagtgcctgtatgtcaagta 511 ||||||| ||| ||||||||||||||| | ||||| ||||| ||| ||| ||| || || Sbjct: 167814 ggagcagcacagctacaaggatcccattactgaatttctggaatgcttgtttgttaacta 167873 Query: 512 tgattttgatggcgctcagcagaagctcgtcgagtgcgagcaggt 556 ||||||||||||||| || ||||| ||| | ||||| ||| |||| Sbjct: 167874 tgattttgatggcgcacaacagaaactcatagagtgtgaggaggt 167918 Score = 79.8 bits (40), Expect = 1e-11 Identities = 91/108 (84%) Strand = Plus / Plus Query: 74 taccgtgctctctgcaccaacagcgagaggagcctcagcgccctctggggcaagcttgcg 133 ||||||||||| ||||| |||| ||||||||| | || ||||| ||||| ||||| || Sbjct: 166828 taccgtgctctgtgcacaaacattgagaggagcttgagtgccctgtggggaaagctggca 166887 Query: 134 gcggagatactgatgcagaactgggatgtcgcgcaggaggagctcaac 181 || ||||| ||||||||||||||||||| || | ||||||||||||| Sbjct: 166888 gctgagattttgatgcagaactgggatgttgcactggaggagctcaac 166935 Score = 77.8 bits (39), Expect = 4e-11 Identities = 78/91 (85%) Strand = Plus / Plus Query: 246 aggatatggctgatgcactggagcctcttcatcttcttcaaccatgagaatggaaggaac 305 ||||||||||||||||||||||| |||| ||||||| ||||||||| || || || || Sbjct: 167099 aggatatggctgatgcactggagtatctttatcttctacaaccatgaaaacggcagaaat 167158 Query: 306 gggatcatcgacctcttcttccaggacaggt 336 |||||||| || || ||||||||||| |||| Sbjct: 167159 gggatcatagatctgttcttccaggagaggt 167189 Score = 44.1 bits (22), Expect = 0.53 Identities = 31/34 (91%) Strand = Plus / Plus Query: 553 aggttatactgaatgatcctttcctgggcaagcg 586 |||| ||| ||||||||||||||||||| ||||| Sbjct: 168382 aggtcatattgaatgatcctttcctgggaaagcg 168415
>dbj|AP005186.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0430F03 Length = 183095 Score = 137 bits (69), Expect = 5e-29 Identities = 186/225 (82%) Strand = Plus / Plus Query: 332 caggtacctgaatgctatccagaccaacgctccccatcttctgaggtaccttgctgctgc 391 ||||||| ||||||| |||||||| | || || ||||||||||| ||||||||||| || Sbjct: 103204 caggtacttgaatgcgatccagacagatgcaccacatcttctgagataccttgctgcagc 103263 Query: 392 agttgttgtcaataagaggagaaggaacatgcttaaggagctcatcaaggtcatccagca 451 | ||||||| || | ||||||||||| |||||||| ||| | | || ||||| || || Sbjct: 103264 aattgttgtgaacagaaggagaaggaatatgcttaaagagttggttaaagtcattcaaca 103323 Query: 452 ggagcagaacatctacaaggatcccatcatcgaattcctggagtgcctgtatgtcaagta 511 ||||||| ||| ||||||||||||||| | ||||||||||| |||||||| || || | Sbjct: 103324 ggagcagcacagctacaaggatcccattactgaattcctggaatgcctgtacgttaacca 103383 Query: 512 tgattttgatggcgctcagcagaagctcgtcgagtgcgagcaggt 556 ||||||||||||||| || ||||| ||| | ||||| |||||||| Sbjct: 103384 tgattttgatggcgcacaacagaaactcatagagtgtgagcaggt 103428 Score = 79.8 bits (40), Expect = 1e-11 Identities = 85/100 (85%) Strand = Plus / Plus Query: 234 cagctccacagcaggatatggctgatgcactggagcctcttcatcttcttcaaccatgag 293 |||||||| | |||||||||||| |||||||| || ||||||||||||| ||||||| Sbjct: 102891 cagctccagaacaggatatggctcatgcactgcagtatcttcatcttctttaaccatgga 102950 Query: 294 aatggaaggaacgggatcatcgacctcttcttccaggaca 333 || || || ||||||||||||| || ||||||||||||| Sbjct: 102951 aacggcagctacgggatcatcgatctgttcttccaggaca 102990 Score = 61.9 bits (31), Expect = 2e-06 Identities = 88/107 (82%) Strand = Plus / Plus Query: 74 taccgtgctctctgcaccaacagcgagaggagcctcagcgccctctggggcaagcttgcg 133 ||||||||||| ||||| | ||||||||||||| | ||||||| ||||| ||||| || Sbjct: 102617 taccgtgctctgtgcacgagcagcgagaggagcttgagcgcccagtgggggaagctgtcg 102676 Query: 134 gcggagatactgatgcagaactgggatgtcgcgcaggaggagctcaa 180 || ||||| |||| | ||||||||||| || | |||||||||||| Sbjct: 102677 gccgagattctgaataacaactgggatgttgcactggaggagctcaa 102723 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 553 aggttatactgaatgatcctttcctgggcaagcg 586 |||| ||||||||||||||||||||||| ||||| Sbjct: 103554 aggtcatactgaatgatcctttcctgggaaagcg 103587
>dbj|AK062040.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-A02, full insert sequence Length = 744 Score = 123 bits (62), Expect = 7e-25 Identities = 125/146 (85%) Strand = Plus / Plus Query: 441 gtcatccagcaggagcagaacatctacaaggatcccatcatcgaattcctggagtgcctg 500 ||||| |||||||||||| ||| ||||||||||||||||| |||||| |||| ||| || Sbjct: 3 gtcattcagcaggagcagcacagctacaaggatcccatcactgaattcttggaatgcttg 62 Query: 501 tatgtcaagtatgattttgatggcgctcagcagaagctcgtcgagtgcgagcaggttata 560 ||||| || |||||||||||||| || || ||||| ||| | ||||| |||||||| ||| Sbjct: 63 tatgttaactatgattttgatggtgcgcaacagaaactcatagagtgtgagcaggtcata 122 Query: 561 ctgaatgatcctttcctgggcaagcg 586 |||||||||||||||| || ||||| Sbjct: 123 ttgaatgatcctttccttggaaagcg 148
>gb|BT018420.1| Zea mays clone EL01N0359H03.d mRNA sequence Length = 1963 Score = 97.6 bits (49), Expect = 4e-17 Identities = 121/145 (83%) Strand = Plus / Plus Query: 332 caggtacctgaatgctatccagaccaacgctccccatcttctgaggtaccttgctgctgc 391 ||||||| |||||||||| ||||| || || | ||||||| | ||||| || ||| |||| Sbjct: 1703 caggtacttgaatgctatacagacaaatgcacaccatcttattaggtatctagctactgc 1762 Query: 392 agttgttgtcaataagaggagaaggaacatgcttaaggagctcatcaaggtcatccagca 451 |||||||||||| || ||||||||||| |||||||| ||| | || |||||||| || || Sbjct: 1763 agttgttgtcaacaaaaggagaaggaatatgcttaaagagttgattaaggtcattcaaca 1822 Query: 452 ggagcagaacatctacaaggatccc 476 |||||| | | ||||||||||||| Sbjct: 1823 ggagcaccatagctacaaggatccc 1847 Score = 42.1 bits (21), Expect = 2.1 Identities = 39/45 (86%) Strand = Plus / Plus Query: 246 aggatatggctgatgcactggagcctcttcatcttcttcaaccat 290 ||||||||||||||||| ||| || ||||||||||| |||||| Sbjct: 1656 aggatatggctgatgcattgggctctgttcatcttctttaaccat 1700
>gb|BT014309.1| Lycopersicon esculentum clone 133560R, mRNA sequence Length = 1561 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 249 atatggctgatgcactggagcctcttcatcttcttcaaccatgagaatggaagga 303 |||||||| ||||| ||||| || |||||||||||||||||||| ||||| |||| Sbjct: 686 atatggctaatgcattggagtctattcatcttcttcaaccatgacaatggcagga 740 Score = 54.0 bits (27), Expect = 6e-04 Identities = 63/75 (84%) Strand = Plus / Plus Query: 86 tgcaccaacagcgagaggagcctcagcgccctctggggcaagcttgcggcggagatactg 145 ||||| ||||| || |||||| |||| || | ||||| |||||||| ||||||||||| Sbjct: 527 tgcacaaacagtgacaggagcgtcagtgcattgtggggaaagcttgcagcggagatacta 586 Query: 146 atgcagaactgggat 160 |||||||| |||||| Sbjct: 587 atgcagaattgggat 601
>ref|XM_361729.1| Magnaporthe grisea 70-15 hypothetical protein (MG04203.4) partial mRNA Length = 1698 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 422 gcttaaggagctcatcaaggtca 444 ||||||||||||||||||||||| Sbjct: 1386 gcttaaggagctcatcaaggtca 1408
>emb|CR701166.2|CNS0G3YY Tetraodon nigroviridis full-length cDNA Length = 1464 Score = 44.1 bits (22), Expect = 0.53 Identities = 58/70 (82%) Strand = Plus / Plus Query: 436 tcaaggtcatccagcaggagcagaacatctacaaggatcccatcatcgaattcctggagt 495 |||||||||| ||||||||| ||| |||||| ||||| |||| ||| || |||||| Sbjct: 835 tcaaggtcatacagcaggagtcttacacctacaaagatccaatcaccgagtttgtggagt 894 Query: 496 gcctgtatgt 505 |||||||||| Sbjct: 895 gcctgtatgt 904
>gb|AC113610.4| Homo sapiens BAC clone RP11-373H2 from 2, complete sequence Length = 96559 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 271 tcttcatcttcttcaaccatgagaat 296 |||||||| ||||||||||||||||| Sbjct: 74333 tcttcatcatcttcaaccatgagaat 74308
>gb|AF080104.2|AF080104 Pisum sativum knotted1-like class I homeodomain protein (PsKn1) mRNA, complete cds Length = 1364 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 264 tggagcctcttcatcttcttc 284 ||||||||||||||||||||| Sbjct: 407 tggagcctcttcatcttcttc 427
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 436 tcaaggtcatccagcaggagc 456 ||||||||||||||||||||| Sbjct: 4660709 tcaaggtcatccagcaggagc 4660729
>gb|AF063307.1|AF063307 Pisum sativum Knox class 1 protein (Hop1) mRNA, complete cds Length = 1778 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 264 tggagcctcttcatcttcttc 284 ||||||||||||||||||||| Sbjct: 835 tggagcctcttcatcttcttc 855
>ref|NM_001037149.1| Sus scrofa caveolin 3 (CAV3), mRNA Length = 456 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 gatatggctgatgcactgga 267 |||||||||||||||||||| Sbjct: 360 gatatggctgatgcactgga 341
>gb|BC108535.1| Xenopus laevis cDNA clone MGC:130988 IMAGE:7977266, complete cds Length = 2378 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 318 ctcttcttccaggacaggta 337 |||||||||||||||||||| Sbjct: 1312 ctcttcttccaggacaggta 1331
>ref|XM_630986.1| Dictyostelium discoideum hypothetical protein (DDB0188541), partial mRNA Length = 4260 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 269 cctcttcatcttcttcaacc 288 |||||||||||||||||||| Sbjct: 3523 cctcttcatcttcttcaacc 3504
>gb|AC005194.2| Homo sapiens chromosome 5, BAC clone 127L20 (LBNL H188), complete sequence Length = 107442 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 ctcttcatcttcttcaacca 289 |||||||||||||||||||| Sbjct: 64546 ctcttcatcttcttcaacca 64527
>gb|AE017354.1| Legionella pneumophila subsp. pneumophila str. Philadelphia 1, complete genome Length = 3397754 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 273 ttcatcttcttcaaccatga 292 |||||||||||||||||||| Sbjct: 2421186 ttcatcttcttcaaccatga 2421167
>gb|AY953426.1| Sus scrofa caveolin 3 (CAV3) mRNA, complete cds Length = 456 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 gatatggctgatgcactgga 267 |||||||||||||||||||| Sbjct: 360 gatatggctgatgcactgga 341
>gb|AY953425.1|AY953424S2 Sus scrofa caveolin 3 (CAV3) gene, exon 2 and complete cds Length = 640 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 gatatggctgatgcactgga 267 |||||||||||||||||||| Sbjct: 264 gatatggctgatgcactgga 245
>gb|AY504677.1| Legionella pneumophila SdeA gene, complete cds Length = 4515 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 273 ttcatcttcttcaaccatga 292 |||||||||||||||||||| Sbjct: 4488 ttcatcttcttcaaccatga 4469
>ref|XR_003339.1| PREDICTED: Mus musculus similar to PRP4 pre-mRNA processing factor 4 homolog B (yeast) (predicted) (LOC671221), mRNA Length = 1453 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 262 actggagcctcttcatcttcttca 285 ||||||||||||||||| |||||| Sbjct: 150 actggagcctcttcatcatcttca 127
>ref|XR_002062.1| PREDICTED: Mus musculus similar to PRP4 pre-mRNA processing factor 4 homolog B (yeast) (predicted) (LOC667713), mRNA Length = 1453 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 262 actggagcctcttcatcttcttca 285 ||||||||||||||||| |||||| Sbjct: 150 actggagcctcttcatcatcttca 127
>emb|AL645507.7| Human DNA sequence from clone RP11-476C24 on chromosome 1 Contains part of the gene for a novel protein, complete sequence Length = 102743 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 405 aagaggagaaggaacatgcttaag 428 ||||||||||||||| |||||||| Sbjct: 31225 aagaggagaaggaacctgcttaag 31248
>ref|XM_968565.1| PREDICTED: Tribolium castaneum similar to CG7627-PA (LOC662473), mRNA Length = 3390 Score = 40.1 bits (20), Expect = 8.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 287 ccatgagaatggaaggaacgggatcatcgacc 318 |||||||||||||||||| || ||||||||| Sbjct: 2050 ccatgagaatggaaggaatggtctcatcgacc 2019
>emb|CR628337.1| Legionella pneumophila str. Lens complete genome Length = 3345687 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 273 ttcatcttcttcaaccatga 292 |||||||||||||||||||| Sbjct: 2364782 ttcatcttcttcaaccatga 2364763
>gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome Length = 3665893 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 ccacagcaggatatggctga 258 |||||||||||||||||||| Sbjct: 1583805 ccacagcaggatatggctga 1583824
>emb|AL663049.8| Mouse DNA sequence from clone RP23-198N8 on chromosome 11 Contains the Mor2 gene for soluble malate dehydrogenase, a novel gene, a phosphoglycerate mutase (Pgam) pseudogene and a CpG island, complete sequence Length = 203295 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 319 tcttcttccaggacaggtacctga 342 |||||||| ||||||||||||||| Sbjct: 121830 tcttcttcaaggacaggtacctga 121853
>emb|AJ242675.1|XLA242675 Xenopus laevis mRNA for XFD-11 protein Length = 2400 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 318 ctcttcttccaggacaggta 337 |||||||||||||||||||| Sbjct: 1316 ctcttcttccaggacaggta 1335
>emb|BX088569.3| Mouse DNA sequence from clone RP23-377B9 on chromosome 4, complete sequence Length = 175195 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 262 actggagcctcttcatcttcttca 285 ||||||||||||||||| |||||| Sbjct: 151748 actggagcctcttcatcatcttca 151725
>dbj|AB226057.1| Aspergillus oryzae cDNA, contig sequence: AoEST2914 Length = 977 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 230 caaccagctccacagcagga 249 |||||||||||||||||||| Sbjct: 366 caaccagctccacagcagga 385
>dbj|AP007170.1| Aspergillus oryzae RIB40 genomic DNA, SC138 Length = 504369 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 154 ctgggatgtcgcgcaggaggagctcaac 181 |||||||||||||| |||| |||||||| Sbjct: 414596 ctgggatgtcgcgctggagaagctcaac 414623
>dbj|AP007161.1| Aspergillus oryzae RIB40 genomic DNA, SC012 Length = 2668010 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 230 caaccagctccacagcagga 249 |||||||||||||||||||| Sbjct: 736085 caaccagctccacagcagga 736104
>gb|AC010290.7| Homo sapiens chromosome 5 clone CTB-125B20, complete sequence Length = 238472 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 ctcttcatcttcttcaacca 289 |||||||||||||||||||| Sbjct: 203873 ctcttcatcttcttcaacca 203854
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 467 caaggatcccatcatcgaattcct 490 |||||||| ||||||||||||||| Sbjct: 1315452 caaggatcgcatcatcgaattcct 1315475
>dbj|AB107985.2| Legionella pneumophila DNA, partial sequence, strain: 80-045 Length = 25709 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 273 ttcatcttcttcaaccatga 292 |||||||||||||||||||| Sbjct: 22418 ttcatcttcttcaaccatga 22399
>gb|AC104655.4| Homo sapiens BAC clone RP11-383P6 from 2, complete sequence Length = 95616 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 266 gagcctcttcatcttcttca 285 |||||||||||||||||||| Sbjct: 66054 gagcctcttcatcttcttca 66073
>gb|U60267.1|SLU60267 Solanum lycopersicum delta 1-pyrroline-5-carboxylate synthetase (tomPRO2) mRNA, complete cds Length = 2239 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 244 gcaggatatggctgatgcactgga 267 ||||||||| |||||||||||||| Sbjct: 1006 gcaggatatagctgatgcactgga 1029
>dbj|AK109971.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-159-C06, full insert sequence Length = 4856 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 525 gctcagcagaagctcgtcga 544 |||||||||||||||||||| Sbjct: 4780 gctcagcagaagctcgtcga 4799
>gb|AC154356.2| Mus musculus BAC clone RP23-189C20 from 13, complete sequence Length = 201031 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 gactccagcagcttcacctc 220 |||||||||||||||||||| Sbjct: 25001 gactccagcagcttcacctc 24982
>gb|AC154628.2| Mus musculus BAC clone RP23-313L7 from 13, complete sequence Length = 212309 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 201 gactccagcagcttcacctc 220 |||||||||||||||||||| Sbjct: 1407 gactccagcagcttcacctc 1426
>gb|CP000020.1| Vibrio fischeri ES114 chromosome I, complete sequence Length = 2906179 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 382 ttgctgctgcagttgttgtc 401 |||||||||||||||||||| Sbjct: 764056 ttgctgctgcagttgttgtc 764037
>gb|AF116844.1|AF116844 Xenopus laevis winged helix transcription factor XFD-11 mRNA, complete cds Length = 2384 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 318 ctcttcttccaggacaggta 337 |||||||||||||||||||| Sbjct: 1316 ctcttcttccaggacaggta 1335
>emb|X90891.1|MMAHCVR16 M.musculus antibody heavy chain variable region (354bp) Length = 354 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 gactccagcagcttcacctc 220 |||||||||||||||||||| Sbjct: 20 gactccagcagcttcacctc 1
>emb|X90890.1|MMAHCVR15 M.musculus antibody heavy chain variable region (375bp) Length = 375 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 gactccagcagcttcacctc 220 |||||||||||||||||||| Sbjct: 20 gactccagcagcttcacctc 1
>emb|X90885.1|MMAHCVR10 M.musculus antibody heavy chain variable region (357bp) Length = 357 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 gactccagcagcttcacctc 220 |||||||||||||||||||| Sbjct: 20 gactccagcagcttcacctc 1 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,452,310 Number of Sequences: 3902068 Number of extensions: 5452310 Number of successful extensions: 111753 Number of sequences better than 10.0: 55 Number of HSP's better than 10.0 without gapping: 56 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 111365 Number of HSP's gapped (non-prelim): 383 length of query: 611 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 588 effective length of database: 17,143,297,704 effective search space: 10080259049952 effective search space used: 10080259049952 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)