>emb|AL606649.4|OSJN00094 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0003B01,
             complete sequence
          Length = 153643

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 67/78 (85%)
 Strand = Plus / Minus

                                                                         
Query: 400   cgtcgtcggaccagtcctgcatctggtcgtcggagaagagcacgtcgacgacgttgtcga 459
             ||||||||||||||||||||| || | | |||||||||||  | ||||||| ||||||||
Sbjct: 34415 cgtcgtcggaccagtcctgcagctcgccctcggagaagagagcctcgacgatgttgtcga 34356

                               
Query: 460   tgagcccgtccacgaagg 477
             |||||  ||| |||||||
Sbjct: 34355 tgagcgagtcgacgaagg 34338

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 67/78 (85%)
 Strand = Plus / Minus

                                                                            
Query: 400      cgtcgtcggaccagtcctgcatctggtcgtcggagaagagcacgtcgacgacgttgtcga 459
                ||||||||||||||||||||| || | | |||||||||||  | ||||||| ||||||||
Sbjct: 32515681 cgtcgtcggaccagtcctgcagctcgccctcggagaagagagcctcgacgatgttgtcga 32515622

                                  
Query: 460      tgagcccgtccacgaagg 477
                |||||  ||| |||||||
Sbjct: 32515621 tgagcgagtcgacgaagg 32515604

>dbj|AK070786.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023064M09, full
           insert sequence
          Length = 1258

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 67/78 (85%)
 Strand = Plus / Minus

                                                                       
Query: 400 cgtcgtcggaccagtcctgcatctggtcgtcggagaagagcacgtcgacgacgttgtcga 459
           ||||||||||||||||||||| || | | |||||||||||  | ||||||| ||||||||
Sbjct: 688 cgtcgtcggaccagtcctgcagctcgccctcggagaagagagcctcgacgatgttgtcga 629

                             
Query: 460 tgagcccgtccacgaagg 477
           |||||  ||| |||||||
Sbjct: 628 tgagcgagtcgacgaagg 611

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 197     catggcatccatctctgaagaaa 219
               |||||||||||||||||||||||
Sbjct: 3660900 catggcatccatctctgaagaaa 3660878

>dbj|AP002854.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0014B15
          Length = 158821

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 197   catggcatccatctctgaagaaa 219
             |||||||||||||||||||||||
Sbjct: 55128 catggcatccatctctgaagaaa 55106

>gb|AF253465.2| Sagittula stellata putative LysR-type transcriptional regulator
            (pcaQ), putative para-hydroxybenzoate hydroxylase (pobA),
            putative gamma-carboxymuconolactone decarboxylase (pcaC),
            protocatechuate 3,4-dioxygenase beta subunit (pcaH),
            protocatechuate 3,4-dioxygenase alpha subunit (pcaG), and
            hypothetical protein genes, complete cds
          Length = 6120

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 397  aggcgtcgtcggaccagtcct 417
            |||||||||||||||||||||
Sbjct: 2200 aggcgtcgtcggaccagtcct 2180

>emb|CT025843.1| Medicago truncatula chromosome 5 clone mth2-17e22, COMPLETE SEQUENCE
          Length = 116514

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 138   atcacagaaaaccctcaaagg 158
             |||||||||||||||||||||
Sbjct: 69332 atcacagaaaaccctcaaagg 69352

>gb|AC093432.2| Homo sapiens chromosome 1 clone RP11-136D19, complete sequence
          Length = 174520

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 165    gactccagatgagcagagctc 185
              |||||||||||||||||||||
Sbjct: 134478 gactccagatgagcagagctc 134498

>dbj|AB169192.1| Macaca fascicularis testis cDNA, clone: QtsA-17921, similar to human
            serologically defined colon cancer antigen 8
            (SDCCAG8),mRNA, RefSeq: NM_006642.1
          Length = 2608

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 165  gactccagatgagcagagctc 185
            |||||||||||||||||||||
Sbjct: 2474 gactccagatgagcagagctc 2494

>gb|AC102342.10| Mus musculus chromosome 18, clone RP23-250K3, complete sequence
          Length = 168009

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 103   gtactgctccatcatatgca 122
             ||||||||||||||||||||
Sbjct: 91874 gtactgctccatcatatgca 91893

>ref|XM_867256.1| PREDICTED: Bos taurus similar to golgi autoantigen, golgin subfamily
            a-like (LOC615450), mRNA
          Length = 3852

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 202  catccatctctgaagaaaca 221
            ||||||||||||||||||||
Sbjct: 2707 catccatctctgaagaaaca 2726

>gb|AC141927.3| Mus musculus BAC clone RP23-237F16 from chromosome 6, complete sequence
          Length = 186452

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 376   gtgcatctgtgcgctgtgctcagg 399
             ||||||||||| ||||||||||||
Sbjct: 88942 gtgcatctgtgggctgtgctcagg 88919

>gb|AC122913.4| Mus musculus BAC clone RP23-25J21 from 3, complete sequence
          Length = 205216

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 143    agaaaaccctcaaaggcaaagaga 166
              |||||||||||||| |||||||||
Sbjct: 146025 agaaaaccctcaaaagcaaagaga 146002

>gb|AC159967.2| Mus musculus chromosome 1, clone RP23-302P9, complete sequence
          Length = 185146

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 173    atgagcagagctctgcacca 192
              ||||||||||||||||||||
Sbjct: 119018 atgagcagagctctgcacca 118999

>emb|AJ621334.1| Thermoproteus tenax leuB gene for putative
           isocitrate/isopropylmalate dehydrogenase
          Length = 1023

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 238 cgcagcagcgatggagcttg 257
           ||||||||||||||||||||
Sbjct: 618 cgcagcagcgatggagcttg 637

>gb|AC183495.1| Brassica oleracea Contig A, complete sequence
          Length = 356505

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 239    gcagcagcgatggagcttgg 258
              ||||||||||||||||||||
Sbjct: 125508 gcagcagcgatggagcttgg 125527

>dbj|AK162401.1| Mus musculus adult male diencephalon cDNA, RIKEN full-length enriched
            library, clone:9330156N22 product:inositol
            polyphosphate-5-phosphatase D, full insert sequence
          Length = 2480

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 173  atgagcagagctctgcacca 192
            ||||||||||||||||||||
Sbjct: 1758 atgagcagagctctgcacca 1777

>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 440     cacgtcgacgacgttgtcga 459
               ||||||||||||||||||||
Sbjct: 2067033 cacgtcgacgacgttgtcga 2067052

>gb|AC161938.2| Mus musculus 6 BAC RP24-162E3 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 163330

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 376   gtgcatctgtgcgctgtgctcagg 399
             ||||||||||| ||||||||||||
Sbjct: 27829 gtgcatctgtgggctgtgctcagg 27852

>emb|AL773518.3| Mouse DNA sequence from clone RP24-231F12 on chromosome 4, complete
              sequence
          Length = 205765

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 100    gtagtactgctccatcatat 119
              ||||||||||||||||||||
Sbjct: 174006 gtagtactgctccatcatat 173987

>gb|AC102895.7| Mus musculus chromosome 15, clone RP24-356D22, complete sequence
          Length = 165778

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 195   gccatggcatccatctctga 214
             ||||||||||||||||||||
Sbjct: 95053 gccatggcatccatctctga 95034

>emb|AL928998.9| Mouse DNA sequence from clone RP23-58A8 on chromosome 2, complete
             sequence
          Length = 115361

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 370   tatgtggtgcatctgtgcgctgtg 393
             ||||||||||||||||| ||||||
Sbjct: 37559 tatgtggtgcatctgtgtgctgtg 37536

>gb|AC102564.7| Mus musculus chromosome 1, clone RP23-210C12, complete sequence
          Length = 230474

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 173   atgagcagagctctgcacca 192
             ||||||||||||||||||||
Sbjct: 43890 atgagcagagctctgcacca 43871

>gb|L33253.1|MUSHYTROPA Mouse hypertrophy-associated mRNA segment
          Length = 196

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 143 agaaaaccctcaaaggcaaagaga 166
           |||||||||||||| |||||||||
Sbjct: 163 agaaaaccctcaaaagcaaagaga 140


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,561,202
Number of Sequences: 3902068
Number of extensions: 3561202
Number of successful extensions: 73521
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 73409
Number of HSP's gapped (non-prelim): 112
length of query: 504
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 482
effective length of database: 17,147,199,772
effective search space: 8264950290104
effective search space used: 8264950290104
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)