ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags12i08 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009473.1| Triticum aestivum clone wr1.pk0030.b10:fis, full insert mRNA sequence Length = 2604 Score = 821 bits (414), Expect = 0.0 Identities = 465/481 (96%), Gaps = 1/481 (0%) Strand = Plus / Plus Query: 49 ccgcggggaacccgttctgatcccgtcagttgtagaagtaactgattagcctgatggcta 108 ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 49 ccgcgggga-cccgctctgatcccgtcagttgtagaagtaactgattagcctgatggcta 107 Query: 109 tggtcgatgagcctctctatccaattgctgtgctgatagatgagcttaaaaatgaagata 168 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 108 tggtcgatgagcctctctatccaattgccgtgctgatagatgagcttaaaaatgaagata 167 Query: 169 ttcagttgcgcctgaactccatcagaagactttccactattgcacgggcacttggagaag 228 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 168 ttcaattgcgcctgaactccatcagaagactttccactattgcacgggcacttggagaag 227 Query: 229 agcgaaccaggaaggaactgattcctttcctcagcgaaaacaatgatgatgaagatgaag 288 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 228 aaagaaccaggaaggaactgattcctttcctcagcgaaaacaatgatgatgaagatgagg 287 Query: 289 tgcttcttgcaatggctgaagaattgggtgtgttcattccttatgttggtggtgtagagc 348 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 288 tgcttcttgcaatggctgaagaattgggtgtgttcattccttatgttgggggtgtagagc 347 Query: 349 atgctcatgttttgcttccaccattggagacattgtctacggnggaggaaacctgtgtcc 408 |||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||||| Sbjct: 348 atgctcatgttttgctcccaccattggagacattgtctacggtggaggaaacttgtgtcc 407 Query: 409 gagacaaagcagttgagtcgctgtgccgcattggtgcacagatgaaagaaaacgacattg 468 |||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||| Sbjct: 408 gagacaaagcagttgagtcgttgtgccgtattggtgcacagatgaaagaaaatgacattg 467 Query: 469 ttgactatttcattccagtagtaaagaggctagcagctggtgagtggtttacagctcgag 528 |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 468 ttgactatttcattgcagtagtaaagaggctagcggctggtgagtggtttacagctcgag 527 Query: 529 t 529 | Sbjct: 528 t 528
>gb|BT018906.1| Zea mays clone EL01T0208F11.d mRNA sequence Length = 2095 Score = 480 bits (242), Expect = e-132 Identities = 382/429 (89%) Strand = Plus / Plus Query: 98 cctgatggctatggtcgatgagcctctctatccaattgctgtgctgatagatgagcttaa 157 ||||||||||||| | ||||||||||| |||||||||||||| ||||| || ||||| || Sbjct: 132 cctgatggctatgattgatgagcctctttatccaattgctgtactgattgacgagctcaa 191 Query: 158 aaatgaagatattcagttgcgcctgaactccatcagaagactttccactattgcacgggc 217 |||||||| || |||||||| || |||||||| ||||||||||| || ||||||||||| Sbjct: 192 gaatgaagacatccagttgcgtctaaactccattagaagactttcaacaattgcacgggc 251 Query: 218 acttggagaagagcgaaccaggaaggaactgattcctttcctcagcgaaaacaatgatga 277 ||||||||||| ||||||||||||| ||||||||||| || || |||||||| ||||| Sbjct: 252 tcttggagaagaaagaaccaggaaggagctgattccttttcttagtgaaaacaacgatga 311 Query: 278 tgaagatgaagtgcttcttgcaatggctgaagaattgggtgtgttcattccttatgttgg 337 |||||| || |||||||||||||||||||| |||||||||||||||||||| |||||||| Sbjct: 312 tgaagacgaggtgcttcttgcaatggctgaggaattgggtgtgttcattccgtatgttgg 371 Query: 338 tggtgtagagcatgctcatgttttgcttccaccattggagacattgtctacggnggagga 397 ||||||||| ||||||||||||||||| ||||| ||||||||||||| ||| | |||||| Sbjct: 372 tggtgtagaacatgctcatgttttgctcccacctttggagacattgtgtacagtggagga 431 Query: 398 aacctgtgtccgagacaaagcagttgagtcgctgtgccgcattggtgcacagatgaaaga 457 ||| |||||||| || ||||||||||| || |||||||| ||||||||||| ||||| || Sbjct: 432 aacttgtgtccgtgataaagcagttgaatctctgtgccgtattggtgcacaaatgaagga 491 Query: 458 aaacgacattgttgactatttcattccagtagtaaagaggctagcagctggtgagtggtt 517 || |||||||| |||| |||||||||||||||||||||||||||||||| |||||||| Sbjct: 492 aactgacattgtcgactggttcattccagtagtaaagaggctagcagctggagagtggtt 551 Query: 518 tacagctcg 526 ||||||||| Sbjct: 552 tacagctcg 560
>gb|AY940682.1| Zea mays protein phosphatase 2A regulatory subunit A mRNA, complete cds Length = 2106 Score = 480 bits (242), Expect = e-132 Identities = 382/429 (89%) Strand = Plus / Plus Query: 98 cctgatggctatggtcgatgagcctctctatccaattgctgtgctgatagatgagcttaa 157 ||||||||||||| | ||||||||||| |||||||||||||| ||||| || ||||| || Sbjct: 157 cctgatggctatgattgatgagcctctttatccaattgctgtactgattgacgagctcaa 216 Query: 158 aaatgaagatattcagttgcgcctgaactccatcagaagactttccactattgcacgggc 217 |||||||| || |||||||| || |||||||| ||||||||||| || ||||||||||| Sbjct: 217 gaatgaagacatccagttgcgtctaaactccattagaagactttcaacaattgcacgggc 276 Query: 218 acttggagaagagcgaaccaggaaggaactgattcctttcctcagcgaaaacaatgatga 277 ||||||||||| ||||||||||||| ||||||||||| || || |||||||| ||||| Sbjct: 277 tcttggagaagaaagaaccaggaaggagctgattccttttcttagtgaaaacaacgatga 336 Query: 278 tgaagatgaagtgcttcttgcaatggctgaagaattgggtgtgttcattccttatgttgg 337 |||||| || |||||||||||||||||||| |||||||||||||||||||| |||||||| Sbjct: 337 tgaagacgaggtgcttcttgcaatggctgaggaattgggtgtgttcattccgtatgttgg 396 Query: 338 tggtgtagagcatgctcatgttttgcttccaccattggagacattgtctacggnggagga 397 ||||||||| ||||||||||||||||| ||||| ||||||||||||| ||| | |||||| Sbjct: 397 tggtgtagaacatgctcatgttttgctcccacctttggagacattgtgtacagtggagga 456 Query: 398 aacctgtgtccgagacaaagcagttgagtcgctgtgccgcattggtgcacagatgaaaga 457 ||| |||||||| || ||||||||||| || |||||||| ||||||||||| ||||| || Sbjct: 457 aacttgtgtccgtgataaagcagttgaatctctgtgccgtattggtgcacaaatgaagga 516 Query: 458 aaacgacattgttgactatttcattccagtagtaaagaggctagcagctggtgagtggtt 517 || |||||||| |||| |||||||||||||||||||||||||||||||| |||||||| Sbjct: 517 aactgacattgtcgactggttcattccagtagtaaagaggctagcagctggagagtggtt 576 Query: 518 tacagctcg 526 ||||||||| Sbjct: 577 tacagctcg 585
>ref|XM_450276.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2211 Score = 454 bits (229), Expect = e-124 Identities = 369/416 (88%) Strand = Plus / Plus Query: 114 gatgagcctctctatccaattgctgtgctgatagatgagcttaaaaatgaagatattcag 173 ||||||||||| ||||| || ||| | |||||||||||||| ||||| ||||||||||| Sbjct: 215 gatgagcctctttatcccatcgctatactgatagatgagctcaaaaacgaagatattcaa 274 Query: 174 ttgcgcctgaactccatcagaagactttccactattgcacgggcacttggagaagagcga 233 ||||| ||||||||||| || || || ||||| |||||||| |||||||||||||| || Sbjct: 275 ttgcgtctgaactccattaggaggctctccacaattgcacgagcacttggagaagaaaga 334 Query: 234 accaggaaggaactgattcctttcctcagcgaaaacaatgatgatgaagatgaagtgctt 293 ||| ||||||| | |||||||| ||||| ||||| ||||| ||||||||||| |||||| Sbjct: 335 acccggaaggagttaattccttttctcagtgaaaataatgacgatgaagatgaggtgctt 394 Query: 294 cttgcaatggctgaagaattgggtgtgttcattccttatgttggtggtgtagagcatgct 353 ||||| ||||||||||||||||| |||||||||||||| ||||| |||||||| |||||| Sbjct: 395 cttgctatggctgaagaattgggcgtgttcattccttacgttgggggtgtagaacatgct 454 Query: 354 catgttttgcttccaccattggagacattgtctacggnggaggaaacctgtgtccgagac 413 ||||||||||| ||||||||||||||||||| ||| | |||||||||||||||||||||| Sbjct: 455 catgttttgctaccaccattggagacattgtgtacagtggaggaaacctgtgtccgagac 514 Query: 414 aaagcagttgagtcgctgtgccgcattggtgcacagatgaaagaaaacgacattgttgac 473 || |||||||| || |||||||| ||||| ||||||||||| |||| |||||||| ||| Sbjct: 515 aaggcagttgaatctctgtgccgtattggagcacagatgaaggaaagtgacattgtagac 574 Query: 474 tatttcattccagtagtaaagaggctagcagctggtgagtggtttacagctcgagt 529 | ||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 575 tggttcgttccagtagtaaagaggctagcagctggtgagtggtttacagctcgagt 630
>emb|AJ243828.1|OSA243828 Oryza sativa mRNA for protein phosphatase 2A regulatory A subunit (RPA1 gene) Length = 2225 Score = 454 bits (229), Expect = e-124 Identities = 369/416 (88%) Strand = Plus / Plus Query: 114 gatgagcctctctatccaattgctgtgctgatagatgagcttaaaaatgaagatattcag 173 ||||||||||| ||||| || ||| | |||||||||||||| ||||| ||||||||||| Sbjct: 179 gatgagcctctttatcccatcgctatactgatagatgagctcaaaaacgaagatattcaa 238 Query: 174 ttgcgcctgaactccatcagaagactttccactattgcacgggcacttggagaagagcga 233 ||||| ||||||||||| || || || ||||| |||||||| |||||||||||||| || Sbjct: 239 ttgcgtctgaactccattaggaggctctccacaattgcacgagcacttggagaagaaaga 298 Query: 234 accaggaaggaactgattcctttcctcagcgaaaacaatgatgatgaagatgaagtgctt 293 ||| ||||||| | |||||||| ||||| ||||| ||||| ||||||||||| |||||| Sbjct: 299 acccggaaggagttaattccttttctcagtgaaaataatgacgatgaagatgaggtgctt 358 Query: 294 cttgcaatggctgaagaattgggtgtgttcattccttatgttggtggtgtagagcatgct 353 ||||| ||||||||||||||||| |||||||||||||| ||||| |||||||| |||||| Sbjct: 359 cttgctatggctgaagaattgggcgtgttcattccttacgttgggggtgtagaacatgct 418 Query: 354 catgttttgcttccaccattggagacattgtctacggnggaggaaacctgtgtccgagac 413 ||||||||||| ||||||||||||||||||| ||| | |||||||||||||||||||||| Sbjct: 419 catgttttgctaccaccattggagacattgtgtacagtggaggaaacctgtgtccgagac 478 Query: 414 aaagcagttgagtcgctgtgccgcattggtgcacagatgaaagaaaacgacattgttgac 473 || |||||||| || |||||||| ||||| ||||||||||| |||| |||||||| ||| Sbjct: 479 aaggcagttgaatctctgtgccgtattggagcacagatgaaggaaagtgacattgtagac 538 Query: 474 tatttcattccagtagtaaagaggctagcagctggtgagtggtttacagctcgagt 529 | ||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 539 tggttcgttccagtagtaaagaggctagcagctggtgagtggtttacagctcgagt 594
>dbj|AK069757.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023031G02, full insert sequence Length = 2210 Score = 454 bits (229), Expect = e-124 Identities = 369/416 (88%) Strand = Plus / Plus Query: 114 gatgagcctctctatccaattgctgtgctgatagatgagcttaaaaatgaagatattcag 173 ||||||||||| ||||| || ||| | |||||||||||||| ||||| ||||||||||| Sbjct: 214 gatgagcctctttatcccatcgctatactgatagatgagctcaaaaacgaagatattcaa 273 Query: 174 ttgcgcctgaactccatcagaagactttccactattgcacgggcacttggagaagagcga 233 ||||| ||||||||||| || || || ||||| |||||||| |||||||||||||| || Sbjct: 274 ttgcgtctgaactccattaggaggctctccacaattgcacgagcacttggagaagaaaga 333 Query: 234 accaggaaggaactgattcctttcctcagcgaaaacaatgatgatgaagatgaagtgctt 293 ||| ||||||| | |||||||| ||||| ||||| ||||| ||||||||||| |||||| Sbjct: 334 acccggaaggagttaattccttttctcagtgaaaataatgacgatgaagatgaggtgctt 393 Query: 294 cttgcaatggctgaagaattgggtgtgttcattccttatgttggtggtgtagagcatgct 353 ||||| ||||||||||||||||| |||||||||||||| ||||| |||||||| |||||| Sbjct: 394 cttgctatggctgaagaattgggcgtgttcattccttacgttgggggtgtagaacatgct 453 Query: 354 catgttttgcttccaccattggagacattgtctacggnggaggaaacctgtgtccgagac 413 ||||||||||| ||||||||||||||||||| ||| | |||||||||||||||||||||| Sbjct: 454 catgttttgctaccaccattggagacattgtgtacagtggaggaaacctgtgtccgagac 513 Query: 414 aaagcagttgagtcgctgtgccgcattggtgcacagatgaaagaaaacgacattgttgac 473 || |||||||| || |||||||| ||||| ||||||||||| |||| |||||||| ||| Sbjct: 514 aaggcagttgaatctctgtgccgtattggagcacagatgaaggaaagtgacattgtagac 573 Query: 474 tatttcattccagtagtaaagaggctagcagctggtgagtggtttacagctcgagt 529 | ||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 574 tggttcgttccagtagtaaagaggctagcagctggtgagtggtttacagctcgagt 629
>gb|AY103751.1| Zea mays PCO067871 mRNA sequence Length = 2061 Score = 440 bits (222), Expect = e-120 Identities = 377/429 (87%) Strand = Plus / Plus Query: 98 cctgatggctatggtcgatgagcctctctatccaattgctgtgctgatagatgagcttaa 157 ||||||||||||| | ||||||||||| || ||||||||||| ||||| ||||||||||| Sbjct: 52 cctgatggctatgattgatgagcctctgtacccaattgctgtactgattgatgagcttaa 111 Query: 158 aaatgaagatattcagttgcgcctgaactccatcagaagactttccactattgcacgggc 217 ||||| || || |||||||| || |||||||| ||||||||||| || ||||||||||| Sbjct: 112 gaatgaggacatccagttgcgtctaaactccattagaagactttcgacaattgcacgggc 171 Query: 218 acttggagaagagcgaaccaggaaggaactgattcctttcctcagcgaaaacaatgatga 277 ||||||||||| ||||||||||||| |||||||| || || || ||||||||||| || Sbjct: 172 tcttggagaagaaagaaccaggaaggagctgattccctttcttagtgaaaacaatgacga 231 Query: 278 tgaagatgaagtgcttcttgcaatggctgaagaattgggtgtgttcattccttatgttgg 337 ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 232 tgaagatgaggtgcttcttgcaatggctgaggaattgggtgtgttcattccttatgttgg 291 Query: 338 tggtgtagagcatgctcatgttttgcttccaccattggagacattgtctacggnggagga 397 |||||||| ||||||||||| |||||||| || ||||| ||||||| ||| | || || Sbjct: 292 gggtgtagaacatgctcatgtgttgcttccccctttggaaacattgtgtacagtagaaga 351 Query: 398 aacctgtgtccgagacaaagcagttgagtcgctgtgccgcattggtgcacagatgaaaga 457 ||| |||||||| || || |||||||| || |||||||| ||||||||||| ||||| || Sbjct: 352 aacttgtgtccgtgataaggcagttgaatctctgtgccgtattggtgcacaaatgaagga 411 Query: 458 aaacgacattgttgactatttcattccagtagtaaagaggctagcagctggtgagtggtt 517 || ||||| || |||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 412 aactgacatagtcgactggttcattccagtagtaaagaggctagcagctggtgagtggtt 471 Query: 518 tacagctcg 526 ||||||||| Sbjct: 472 tacagctcg 480
>emb|AJ243829.1|OSA243829 Oryza sativa RPA gene for protein phosphatase 2A A subunit, exons 1-12 Length = 6096 Score = 385 bits (194), Expect = e-103 Identities = 334/381 (87%) Strand = Plus / Plus Query: 114 gatgagcctctctatccaattgctgtgctgatagatgagcttaaaaatgaagatattcag 173 ||||||||||| ||||| || ||| | |||||||||||||| ||||| ||||||||||| Sbjct: 584 gatgagcctctttatcccatcgctatactgatagatgagctcaaaaacgaagatattcaa 643 Query: 174 ttgcgcctgaactccatcagaagactttccactattgcacgggcacttggagaagagcga 233 ||||| ||||||||||| || || || ||||| |||||||| |||||||||||||| || Sbjct: 644 ttgcgtctgaactccattaggaggctctccacaattgcacgagcacttggagaagaaaga 703 Query: 234 accaggaaggaactgattcctttcctcagcgaaaacaatgatgatgaagatgaagtgctt 293 ||| ||||||| | |||||||| ||||| ||||| ||||| ||||||||||| |||||| Sbjct: 704 acccggaaggagttaattccttttctcagtgaaaataatgacgatgaagatgaggtgctt 763 Query: 294 cttgcaatggctgaagaattgggtgtgttcattccttatgttggtggtgtagagcatgct 353 ||||| ||||||||||||||||| |||||||||||||| ||||| |||||||| |||||| Sbjct: 764 cttgctatggctgaagaattgggcgtgttcattccttacgttgggggtgtagaacatgct 823 Query: 354 catgttttgcttccaccattggagacattgtctacggnggaggaaacctgtgtccgagac 413 ||||||||||| ||||||||||||||||||| ||| | |||||||||||||||||||||| Sbjct: 824 catgttttgctaccaccattggagacattgtgtacagtggaggaaacctgtgtccgagac 883 Query: 414 aaagcagttgagtcgctgtgccgcattggtgcacagatgaaagaaaacgacattgttgac 473 || |||||||| || |||||||| ||||| ||||||||||| |||| |||||||| ||| Sbjct: 884 aaggcagttgaatctctgtgccgtattggagcacagatgaaggaaagtgacattgtagac 943 Query: 474 tatttcattccagtagtaaag 494 | ||| |||||||||||||| Sbjct: 944 tggttcgttccagtagtaaag 964 Score = 73.8 bits (37), Expect = 5e-10 Identities = 37/37 (100%) Strand = Plus / Plus Query: 493 agaggctagcagctggtgagtggtttacagctcgagt 529 ||||||||||||||||||||||||||||||||||||| Sbjct: 1324 agaggctagcagctggtgagtggtttacagctcgagt 1360
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 385 bits (194), Expect = e-103 Identities = 334/381 (87%) Strand = Plus / Minus Query: 114 gatgagcctctctatccaattgctgtgctgatagatgagcttaaaaatgaagatattcag 173 ||||||||||| ||||| || ||| | |||||||||||||| ||||| ||||||||||| Sbjct: 3709039 gatgagcctctttatcccatcgctatactgatagatgagctcaaaaacgaagatattcaa 3708980 Query: 174 ttgcgcctgaactccatcagaagactttccactattgcacgggcacttggagaagagcga 233 ||||| ||||||||||| || || || ||||| |||||||| |||||||||||||| || Sbjct: 3708979 ttgcgtctgaactccattaggaggctctccacaattgcacgagcacttggagaagaaaga 3708920 Query: 234 accaggaaggaactgattcctttcctcagcgaaaacaatgatgatgaagatgaagtgctt 293 ||| ||||||| | |||||||| ||||| ||||| ||||| ||||||||||| |||||| Sbjct: 3708919 acccggaaggagttaattccttttctcagtgaaaataatgacgatgaagatgaggtgctt 3708860 Query: 294 cttgcaatggctgaagaattgggtgtgttcattccttatgttggtggtgtagagcatgct 353 ||||| ||||||||||||||||| |||||||||||||| ||||| |||||||| |||||| Sbjct: 3708859 cttgctatggctgaagaattgggcgtgttcattccttacgttgggggtgtagaacatgct 3708800 Query: 354 catgttttgcttccaccattggagacattgtctacggnggaggaaacctgtgtccgagac 413 ||||||||||| ||||||||||||||||||| ||| | |||||||||||||||||||||| Sbjct: 3708799 catgttttgctaccaccattggagacattgtgtacagtggaggaaacctgtgtccgagac 3708740 Query: 414 aaagcagttgagtcgctgtgccgcattggtgcacagatgaaagaaaacgacattgttgac 473 || |||||||| || |||||||| ||||| ||||||||||| |||| |||||||| ||| Sbjct: 3708739 aaggcagttgaatctctgtgccgtattggagcacagatgaaggaaagtgacattgtagac 3708680 Query: 474 tatttcattccagtagtaaag 494 | ||| |||||||||||||| Sbjct: 3708679 tggttcgttccagtagtaaag 3708659 Score = 73.8 bits (37), Expect = 5e-10 Identities = 37/37 (100%) Strand = Plus / Minus Query: 493 agaggctagcagctggtgagtggtttacagctcgagt 529 ||||||||||||||||||||||||||||||||||||| Sbjct: 3708299 agaggctagcagctggtgagtggtttacagctcgagt 3708263
>dbj|AP005578.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1695_A02 Length = 156214 Score = 385 bits (194), Expect = e-103 Identities = 334/381 (87%) Strand = Plus / Minus Query: 114 gatgagcctctctatccaattgctgtgctgatagatgagcttaaaaatgaagatattcag 173 ||||||||||| ||||| || ||| | |||||||||||||| ||||| ||||||||||| Sbjct: 117300 gatgagcctctttatcccatcgctatactgatagatgagctcaaaaacgaagatattcaa 117241 Query: 174 ttgcgcctgaactccatcagaagactttccactattgcacgggcacttggagaagagcga 233 ||||| ||||||||||| || || || ||||| |||||||| |||||||||||||| || Sbjct: 117240 ttgcgtctgaactccattaggaggctctccacaattgcacgagcacttggagaagaaaga 117181 Query: 234 accaggaaggaactgattcctttcctcagcgaaaacaatgatgatgaagatgaagtgctt 293 ||| ||||||| | |||||||| ||||| ||||| ||||| ||||||||||| |||||| Sbjct: 117180 acccggaaggagttaattccttttctcagtgaaaataatgacgatgaagatgaggtgctt 117121 Query: 294 cttgcaatggctgaagaattgggtgtgttcattccttatgttggtggtgtagagcatgct 353 ||||| ||||||||||||||||| |||||||||||||| ||||| |||||||| |||||| Sbjct: 117120 cttgctatggctgaagaattgggcgtgttcattccttacgttgggggtgtagaacatgct 117061 Query: 354 catgttttgcttccaccattggagacattgtctacggnggaggaaacctgtgtccgagac 413 ||||||||||| ||||||||||||||||||| ||| | |||||||||||||||||||||| Sbjct: 117060 catgttttgctaccaccattggagacattgtgtacagtggaggaaacctgtgtccgagac 117001 Query: 414 aaagcagttgagtcgctgtgccgcattggtgcacagatgaaagaaaacgacattgttgac 473 || |||||||| || |||||||| ||||| ||||||||||| |||| |||||||| ||| Sbjct: 117000 aaggcagttgaatctctgtgccgtattggagcacagatgaaggaaagtgacattgtagac 116941 Query: 474 tatttcattccagtagtaaag 494 | ||| |||||||||||||| Sbjct: 116940 tggttcgttccagtagtaaag 116920 Score = 73.8 bits (37), Expect = 5e-10 Identities = 37/37 (100%) Strand = Plus / Minus Query: 493 agaggctagcagctggtgagtggtttacagctcgagt 529 ||||||||||||||||||||||||||||||||||||| Sbjct: 116560 agaggctagcagctggtgagtggtttacagctcgagt 116524
>dbj|AP005553.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1116_H10 Length = 101054 Score = 385 bits (194), Expect = e-103 Identities = 334/381 (87%) Strand = Plus / Minus Query: 114 gatgagcctctctatccaattgctgtgctgatagatgagcttaaaaatgaagatattcag 173 ||||||||||| ||||| || ||| | |||||||||||||| ||||| ||||||||||| Sbjct: 16341 gatgagcctctttatcccatcgctatactgatagatgagctcaaaaacgaagatattcaa 16282 Query: 174 ttgcgcctgaactccatcagaagactttccactattgcacgggcacttggagaagagcga 233 ||||| ||||||||||| || || || ||||| |||||||| |||||||||||||| || Sbjct: 16281 ttgcgtctgaactccattaggaggctctccacaattgcacgagcacttggagaagaaaga 16222 Query: 234 accaggaaggaactgattcctttcctcagcgaaaacaatgatgatgaagatgaagtgctt 293 ||| ||||||| | |||||||| ||||| ||||| ||||| ||||||||||| |||||| Sbjct: 16221 acccggaaggagttaattccttttctcagtgaaaataatgacgatgaagatgaggtgctt 16162 Query: 294 cttgcaatggctgaagaattgggtgtgttcattccttatgttggtggtgtagagcatgct 353 ||||| ||||||||||||||||| |||||||||||||| ||||| |||||||| |||||| Sbjct: 16161 cttgctatggctgaagaattgggcgtgttcattccttacgttgggggtgtagaacatgct 16102 Query: 354 catgttttgcttccaccattggagacattgtctacggnggaggaaacctgtgtccgagac 413 ||||||||||| ||||||||||||||||||| ||| | |||||||||||||||||||||| Sbjct: 16101 catgttttgctaccaccattggagacattgtgtacagtggaggaaacctgtgtccgagac 16042 Query: 414 aaagcagttgagtcgctgtgccgcattggtgcacagatgaaagaaaacgacattgttgac 473 || |||||||| || |||||||| ||||| ||||||||||| |||| |||||||| ||| Sbjct: 16041 aaggcagttgaatctctgtgccgtattggagcacagatgaaggaaagtgacattgtagac 15982 Query: 474 tatttcattccagtagtaaag 494 | ||| |||||||||||||| Sbjct: 15981 tggttcgttccagtagtaaag 15961 Score = 73.8 bits (37), Expect = 5e-10 Identities = 37/37 (100%) Strand = Plus / Minus Query: 493 agaggctagcagctggtgagtggtttacagctcgagt 529 ||||||||||||||||||||||||||||||||||||| Sbjct: 15601 agaggctagcagctggtgagtggtttacagctcgagt 15565
>gb|BT016817.1| Zea mays clone Contig650 mRNA sequence Length = 1853 Score = 307 bits (155), Expect = 2e-80 Identities = 229/254 (90%) Strand = Plus / Plus Query: 273 gatgatgaagatgaagtgcttcttgcaatggctgaagaattgggtgtgttcattccttat 332 ||||||||||| || |||||||||||||| ||||| |||||||||||||||||||| ||| Sbjct: 15 gatgatgaagacgaggtgcttcttgcaatcgctgaggaattgggtgtgttcattccgtat 74 Query: 333 gttggtggtgtagagcatgctcatgttttgcttccaccattggagacattgtctacggng 392 |||||||||||||| ||||||||||||||||| ||||| ||||||||||||| ||| | | Sbjct: 75 gttggtggtgtagaacatgctcatgttttgctcccacctttggagacattgtgtacagtg 134 Query: 393 gaggaaacctgtgtccgagacaaagcagttgagtcgctgtgccgcattggtgcacagatg 452 |||||||| |||||||| || ||||||||||| || |||||||| ||||||||||| ||| Sbjct: 135 gaggaaacttgtgtccgtgataaagcagttgaatctctgtgccgtattggtgcacaaatg 194 Query: 453 aaagaaaacgacattgttgactatttcattccagtagtaaagaggctagcagctggtgag 512 || |||| |||||||| |||| |||||||||||||||||||||||||||||||| ||| Sbjct: 195 aaggaaactgacattgtcgactggttcattccagtagtaaagaggctagcagctggagag 254 Query: 513 tggtttacagctcg 526 |||||||||||||| Sbjct: 255 tggtttacagctcg 268
>ref|NM_113479.2| Arabidopsis thaliana PDF1; protein phosphatase type 2A regulator AT3G25800 (PDF1) transcript variant AT3G25800.1 mRNA, complete cds Length = 2087 Score = 143 bits (72), Expect = 7e-31 Identities = 165/196 (84%) Strand = Plus / Plus Query: 181 tgaactccatcagaagactttccactattgcacgggcacttggagaagagcgaaccagga 240 |||| ||||||||||| ||||| || || || || || ||||| |||||| | || || | Sbjct: 179 tgaattccatcagaaggctttctacgatcgctcgtgctcttggggaagagaggactagaa 238 Query: 241 aggaactgattcctttcctcagcgaaaacaatgatgatgaagatgaagtgcttcttgcaa 300 ||||| |||| |||||||| |||||||||||||| ||||| ||||| || | | |||| Sbjct: 239 aggaattgatccctttccttagcgaaaacaatgacgatgatgatgaggttttattagcaa 298 Query: 301 tggctgaagaattgggtgtgttcattccttatgttggtggtgtagagcatgctcatgttt 360 |||||||||||||||||||||| |||||||||||||||||||| ||| |||| |||||| Sbjct: 299 tggctgaagaattgggtgtgtttattccttatgttggtggtgttgagtatgcacatgttc 358 Query: 361 tgcttccaccattgga 376 | |||||||| ||||| Sbjct: 359 ttcttccacctttgga 374
>ref|NM_001035692.1| Arabidopsis thaliana PDF1; protein phosphatase type 2A regulator AT3G25800 (PDF1) transcript variant AT3G25800.2 mRNA, complete cds Length = 2099 Score = 143 bits (72), Expect = 7e-31 Identities = 165/196 (84%) Strand = Plus / Plus Query: 181 tgaactccatcagaagactttccactattgcacgggcacttggagaagagcgaaccagga 240 |||| ||||||||||| ||||| || || || || || ||||| |||||| | || || | Sbjct: 179 tgaattccatcagaaggctttctacgatcgctcgtgctcttggggaagagaggactagaa 238 Query: 241 aggaactgattcctttcctcagcgaaaacaatgatgatgaagatgaagtgcttcttgcaa 300 ||||| |||| |||||||| |||||||||||||| ||||| ||||| || | | |||| Sbjct: 239 aggaattgatccctttccttagcgaaaacaatgacgatgatgatgaggttttattagcaa 298 Query: 301 tggctgaagaattgggtgtgttcattccttatgttggtggtgtagagcatgctcatgttt 360 |||||||||||||||||||||| |||||||||||||||||||| ||| |||| |||||| Sbjct: 299 tggctgaagaattgggtgtgtttattccttatgttggtggtgttgagtatgcacatgttc 358 Query: 361 tgcttccaccattgga 376 | |||||||| ||||| Sbjct: 359 ttcttccacctttgga 374
>emb|X82002.1|AT65KPDF1 A.thaliana mRNA for 65 kDa regulatory subunit of protein phosphatase 2A Length = 1842 Score = 143 bits (72), Expect = 7e-31 Identities = 165/196 (84%) Strand = Plus / Plus Query: 181 tgaactccatcagaagactttccactattgcacgggcacttggagaagagcgaaccagga 240 |||| ||||||||||| ||||| || || || || || ||||| |||||| | || || | Sbjct: 113 tgaattccatcagaaggctttctacgatcgctcgtgctcttggggaagagaggactagaa 172 Query: 241 aggaactgattcctttcctcagcgaaaacaatgatgatgaagatgaagtgcttcttgcaa 300 ||||| |||| |||||||| |||||||||||||| ||||| ||||| || | | |||| Sbjct: 173 aggaattgatccctttccttagcgaaaacaatgacgatgatgatgaggttttattagcaa 232 Query: 301 tggctgaagaattgggtgtgttcattccttatgttggtggtgtagagcatgctcatgttt 360 |||||||||||||||||||||| |||||||||||||||||||| ||| |||| |||||| Sbjct: 233 tggctgaagaattgggtgtgtttattccttatgttggtggtgttgagtatgcacatgttc 292 Query: 361 tgcttccaccattgga 376 | |||||||| ||||| Sbjct: 293 ttcttccacctttgga 308
>gb|BT008356.1| Arabidopsis thaliana At3g25800 gene, complete cds Length = 1764 Score = 143 bits (72), Expect = 7e-31 Identities = 165/196 (84%) Strand = Plus / Plus Query: 181 tgaactccatcagaagactttccactattgcacgggcacttggagaagagcgaaccagga 240 |||| ||||||||||| ||||| || || || || || ||||| |||||| | || || | Sbjct: 80 tgaattccatcagaaggctttctacgatcgctcgtgctcttggggaagagaggactagaa 139 Query: 241 aggaactgattcctttcctcagcgaaaacaatgatgatgaagatgaagtgcttcttgcaa 300 ||||| |||| |||||||| |||||||||||||| ||||| ||||| || | | |||| Sbjct: 140 aggaattgatccctttccttagcgaaaacaatgacgatgatgatgaggttttattagcaa 199 Query: 301 tggctgaagaattgggtgtgttcattccttatgttggtggtgtagagcatgctcatgttt 360 |||||||||||||||||||||| |||||||||||||||||||| ||| |||| |||||| Sbjct: 200 tggctgaagaattgggtgtgtttattccttatgttggtggtgttgagtatgcacatgttc 259 Query: 361 tgcttccaccattgga 376 | |||||||| ||||| Sbjct: 260 ttcttccacctttgga 275
>gb|BT002488.1| Arabidopsis thaliana protein phosphatase 2A 65 kDa regulatory subunit (At3g25800) mRNA, complete cds Length = 2061 Score = 143 bits (72), Expect = 7e-31 Identities = 165/196 (84%) Strand = Plus / Plus Query: 181 tgaactccatcagaagactttccactattgcacgggcacttggagaagagcgaaccagga 240 |||| ||||||||||| ||||| || || || || || ||||| |||||| | || || | Sbjct: 179 tgaattccatcagaaggctttctacgatcgctcgtgctcttggggaagagaggactagaa 238 Query: 241 aggaactgattcctttcctcagcgaaaacaatgatgatgaagatgaagtgcttcttgcaa 300 ||||| |||| |||||||| |||||||||||||| ||||| ||||| || | | |||| Sbjct: 239 aggaattgatccctttccttagcgaaaacaatgacgatgatgatgaggttttattagcaa 298 Query: 301 tggctgaagaattgggtgtgttcattccttatgttggtggtgtagagcatgctcatgttt 360 |||||||||||||||||||||| |||||||||||||||||||| ||| |||| |||||| Sbjct: 299 tggctgaagaattgggtgtgtttattccttatgttggtggtgttgagtatgcacatgttc 358 Query: 361 tgcttccaccattgga 376 | |||||||| ||||| Sbjct: 359 ttcttccacctttgga 374
>dbj|AB028607.1| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone:K13N2 Length = 77483 Score = 143 bits (72), Expect = 7e-31 Identities = 165/196 (84%) Strand = Plus / Minus Query: 181 tgaactccatcagaagactttccactattgcacgggcacttggagaagagcgaaccagga 240 |||| ||||||||||| ||||| || || || || || ||||| |||||| | || || | Sbjct: 62400 tgaattccatcagaaggctttctacgatcgctcgtgctcttggggaagagaggactagaa 62341 Query: 241 aggaactgattcctttcctcagcgaaaacaatgatgatgaagatgaagtgcttcttgcaa 300 ||||| |||| |||||||| |||||||||||||| ||||| ||||| || | | |||| Sbjct: 62340 aggaattgatccctttccttagcgaaaacaatgacgatgatgatgaggttttattagcaa 62281 Query: 301 tggctgaagaattgggtgtgttcattccttatgttggtggtgtagagcatgctcatgttt 360 |||||||||||||||||||||| |||||||||||||||||||| ||| |||| |||||| Sbjct: 62280 tggctgaagaattgggtgtgtttattccttatgttggtggtgttgagtatgcacatgttc 62221 Query: 361 tgcttccaccattgga 376 | |||||||| ||||| Sbjct: 62220 ttcttccacctttgga 62205
>gb|AF196286.1|AF196286 Medicago sativa subsp. x varia Ser/Thr specific protein phosphatase 2A A regulatory subunit alpha isoform mRNA, complete cds Length = 2146 Score = 95.6 bits (48), Expect = 1e-16 Identities = 192/240 (80%) Strand = Plus / Plus Query: 138 gtgctgatagatgagcttaaaaatgaagatattcagttgcgcctgaactccatcagaaga 197 ||||| ||||| ||||| |||||||| ||||| || |||| ||||||| || | || Sbjct: 207 gtgcttatagacgagctcaaaaatgatgatatccaactgcggttgaactcaattcgtagg 266 Query: 198 ctttccactattgcacgggcacttggagaagagcgaaccaggaaggaactgattcctttc 257 || ||||| |||||||| || |||||||| ||||||||| | |||||| | ||||| || Sbjct: 267 ctatccaccattgcacgtgctcttggagaggagcgaacccgtaaggaattaattccattt 326 Query: 258 ctcagcgaaaacaatgatgatgaagatgaagtgcttcttgcaatggctgaagaattgggt 317 | | || || ||||| || || ||||| || |||||||||||||| ||||| ||||| Sbjct: 327 ttaactgagaataatgacgacgatgatgaggtacttcttgcaatggccgaagagttggga 386 Query: 318 gtgttcattccttatgttggtggtgtagagcatgctcatgttttgcttccaccattggag 377 || |||||||||||||||||||| || || |||||| ||| ||||| ||||| |||||| Sbjct: 387 gttttcattccttatgttggtggagtcgaacatgctagtgtgttgctcccacctttggag 446
>emb|AJ131045.1|CAR131045 Cicer arietinum mRNA for protein phosphatase Length = 1776 Score = 93.7 bits (47), Expect = 6e-16 Identities = 145/178 (81%) Strand = Plus / Plus Query: 253 ctttcctcagcgaaaacaatgatgatgaagatgaagtgcttcttgcaatggctgaagaat 312 |||| |||||||| ||||| |||||||| ||||| ||||||||||||| || || |||| Sbjct: 6 cttttctcagcgagaacaacgatgatgatgatgaggtgcttcttgcaaccgcagaggaat 65 Query: 313 tgggtgtgttcattccttatgttggtggtgtagagcatgctcatgttttgcttccaccat 372 | || || ||| ||||||||||||||||||| ||| ||||| ||||||||||| || | Sbjct: 66 taggggttttcgttccttatgttggtggtgttgagtatgctagcgttttgcttccgcctt 125 Query: 373 tggagacattgtctacggnggaggaaacctgtgtccgagacaaagcagttgagtcgct 430 |||| || ||| ||| | |||||||| ||||| | || ||| ||||||||||||| Sbjct: 126 tggaaactctgtgtaccgttgaggaaacttgtgttagggataaatcagttgagtcgct 183
>emb|X97913.1|NTPP2A N.tabacum mRNA for protein phosphatase 2A, 65kD regulatory subunit Length = 2153 Score = 85.7 bits (43), Expect = 1e-13 Identities = 73/83 (87%) Strand = Plus / Plus Query: 297 gcaatggctgaagaattgggtgtgttcattccttatgttggtggtgtagagcatgctcat 356 |||||||||||||| | |||||||| || ||||||||||| |||||||||||||||||| Sbjct: 300 gcaatggctgaagagcttggtgtgtttatcccttatgttggaggtgtagagcatgctcat 359 Query: 357 gttttgcttccaccattggagac 379 || ||||| || || |||||||| Sbjct: 360 gtcttgctccccccgttggagac 382 Score = 44.1 bits (22), Expect = 0.46 Identities = 34/38 (89%) Strand = Plus / Plus Query: 492 aagaggctagcagctggtgagtggtttacagctcgagt 529 |||||||| ||||||||||| ||||| |||||| |||| Sbjct: 495 aagaggctggcagctggtgaatggttcacagctagagt 532
>ref|NM_102360.2| Arabidopsis thaliana RCN1 (ROOTS CURL IN NPA); protein phosphatase type 2A regulator AT1G25490 (RCN1) mRNA, complete cds Length = 2086 Score = 77.8 bits (39), Expect = 3e-11 Identities = 165/207 (79%) Strand = Plus / Plus Query: 101 gatggctatggtcgatgagcctctctatccaattgctgtgctgatagatgagcttaaaaa 160 |||||||||||| ||||| || | ||||| ||||||||||| |||||||||||||| || Sbjct: 117 gatggctatggtagatgaaccgttgtatcccattgctgtgcttatagatgagcttaagaa 176 Query: 161 tgaagatattcagttgcgcctgaactccatcagaagactttccactattgcacgggcact 220 ||| ||||||||| | || ||||||| ||| | | | || ||||| || || || || Sbjct: 177 tgatgatattcagcttcgtttgaactcgatccgtcgcttatctactatagctcgtgctct 236 Query: 221 tggagaagagcgaaccaggaaggaactgattcctttcctcagcgaaaacaatgatgatga 280 |||||| ||||| || |||||||| | || ||||| | || || || | ||| ||||| Sbjct: 237 tggagaggagcgtacaaggaaggagttaatcccttttttgagtgagaatagtgacgatga 296 Query: 281 agatgaagtgcttcttgcaatggctga 307 ||||| |||||||||||||||||||| Sbjct: 297 cgatgaggtgcttcttgcaatggctga 323
>emb|X82001.1|AT65KRP2A A.thaliana gene for 65 kDa regulatory subunit of protein phosphatase 2A Length = 4705 Score = 77.8 bits (39), Expect = 3e-11 Identities = 165/207 (79%) Strand = Plus / Plus Query: 101 gatggctatggtcgatgagcctctctatccaattgctgtgctgatagatgagcttaaaaa 160 |||||||||||| ||||| || | ||||| ||||||||||| |||||||||||||| || Sbjct: 457 gatggctatggtagatgaaccgttgtatcccattgctgtgcttatagatgagcttaagaa 516 Query: 161 tgaagatattcagttgcgcctgaactccatcagaagactttccactattgcacgggcact 220 ||| ||||||||| | || ||||||| ||| | | | || ||||| || || || || Sbjct: 517 tgatgatattcagcttcgtttgaactcgatccgtcgcttatctactatagctcgtgctct 576 Query: 221 tggagaagagcgaaccaggaaggaactgattcctttcctcagcgaaaacaatgatgatga 280 |||||| ||||| || |||||||| | || ||||| | || || || | ||| ||||| Sbjct: 577 tggagaggagcgtacaaggaaggagttaatcccttttttgagtgagaatagtgacgatga 636 Query: 281 agatgaagtgcttcttgcaatggctga 307 ||||| |||||||||||||||||||| Sbjct: 637 cgatgaggtgcttcttgcaatggctga 663
>gb|AY120757.1| Arabidopsis thaliana phosphoprotein phosphatase 2A regulatory subunit A (At1g25490) mRNA, complete cds Length = 2035 Score = 77.8 bits (39), Expect = 3e-11 Identities = 165/207 (79%) Strand = Plus / Plus Query: 101 gatggctatggtcgatgagcctctctatccaattgctgtgctgatagatgagcttaaaaa 160 |||||||||||| ||||| || | ||||| ||||||||||| |||||||||||||| || Sbjct: 117 gatggctatggtagatgaaccgttgtatcccattgctgtgcttatagatgagcttaagaa 176 Query: 161 tgaagatattcagttgcgcctgaactccatcagaagactttccactattgcacgggcact 220 ||| ||||||||| | || ||||||| ||| | | | || ||||| || || || || Sbjct: 177 tgatgatattcagcttcgtttgaactcgatccgtcgcttatctactatagctcgtgctct 236 Query: 221 tggagaagagcgaaccaggaaggaactgattcctttcctcagcgaaaacaatgatgatga 280 |||||| ||||| || |||||||| | || ||||| | || || || | ||| ||||| Sbjct: 237 tggagaggagcgtacaaggaaggagttaatcccttttttgagtgagaatagtgacgatga 296 Query: 281 agatgaagtgcttcttgcaatggctga 307 ||||| |||||||||||||||||||| Sbjct: 297 cgatgaggtgcttcttgcaatggctga 323
>gb|AC079281.4|AC079281 Arabidopsis thaliana chromosome 1 BAC F2J7 genomic sequence, complete sequence Length = 102540 Score = 77.8 bits (39), Expect = 3e-11 Identities = 165/207 (79%) Strand = Plus / Minus Query: 101 gatggctatggtcgatgagcctctctatccaattgctgtgctgatagatgagcttaaaaa 160 |||||||||||| ||||| || | ||||| ||||||||||| |||||||||||||| || Sbjct: 49555 gatggctatggtagatgaaccgttgtatcccattgctgtgcttatagatgagcttaagaa 49496 Query: 161 tgaagatattcagttgcgcctgaactccatcagaagactttccactattgcacgggcact 220 ||| ||||||||| | || ||||||| ||| | | | || ||||| || || || || Sbjct: 49495 tgatgatattcagcttcgtttgaactcgatccgtcgcttatctactatagctcgtgctct 49436 Query: 221 tggagaagagcgaaccaggaaggaactgattcctttcctcagcgaaaacaatgatgatga 280 |||||| ||||| || |||||||| | || ||||| | || || || | ||| ||||| Sbjct: 49435 tggagaggagcgtacaaggaaggagttaatcccttttttgagtgagaatagtgacgatga 49376 Query: 281 agatgaagtgcttcttgcaatggctga 307 ||||| |||||||||||||||||||| Sbjct: 49375 cgatgaggtgcttcttgcaatggctga 49349
>gb|DQ323045.1| Phaseolus vulgaris clone BAC-71F18, complete sequence Length = 157468 Score = 77.8 bits (39), Expect = 3e-11 Identities = 78/91 (85%) Strand = Plus / Plus Query: 238 ggaaggaactgattcctttcctcagcgaaaacaatgatgatgaagatgaagtgcttcttg 297 ||||||| |||||||| || |||||||| ||||| || ||||| |||||||||||||| | Sbjct: 139468 ggaaggagctgattccgtttctcagcgagaacaacgacgatgacgatgaagtgcttctcg 139527 Query: 298 caatggctgaagaattgggtgtgttcattcc 328 ||||||| || || ||||| || |||||||| Sbjct: 139528 caatggccgaggagttgggcgttttcattcc 139558 Score = 42.1 bits (21), Expect = 1.8 Identities = 33/37 (89%) Strand = Plus / Plus Query: 493 agaggctagcagctggtgagtggtttacagctcgagt 529 |||||||||| || ||||||||||| ||||| ||||| Sbjct: 140020 agaggctagctgccggtgagtggttcacagcacgagt 140056
>gb|U21557.1|ATU21557 Arabidopsis thaliana phosphoprotein phosphatase 2A regulatory subunit A (RCN1) mRNA, complete cds Length = 1993 Score = 77.8 bits (39), Expect = 3e-11 Identities = 165/207 (79%) Strand = Plus / Plus Query: 101 gatggctatggtcgatgagcctctctatccaattgctgtgctgatagatgagcttaaaaa 160 |||||||||||| ||||| || | ||||| ||||||||||| |||||||||||||| || Sbjct: 78 gatggctatggtagatgaaccgttgtatcccattgctgtgcttatagatgagcttaagaa 137 Query: 161 tgaagatattcagttgcgcctgaactccatcagaagactttccactattgcacgggcact 220 ||| ||||||||| | || ||||||| ||| | | | || ||||| || || || || Sbjct: 138 tgatgatattcagcttcgtttgaactcgatccgtcgcttatctactatagctcgtgctct 197 Query: 221 tggagaagagcgaaccaggaaggaactgattcctttcctcagcgaaaacaatgatgatga 280 |||||| ||||| || |||||||| | || ||||| | || || || | ||| ||||| Sbjct: 198 tggagaggagcgtacaaggaaggagttaatcccttttttgagtgagaatagtgacgatga 257 Query: 281 agatgaagtgcttcttgcaatggctga 307 ||||| |||||||||||||||||||| Sbjct: 258 cgatgaggtgcttcttgcaatggctga 284
>gb|U27299.1|ATU27299 Arabidopsis thaliana serine/threonine protein phosphatase type 2A regulatory subunit A mRNA, complete cds Length = 2020 Score = 77.8 bits (39), Expect = 3e-11 Identities = 165/207 (79%) Strand = Plus / Plus Query: 101 gatggctatggtcgatgagcctctctatccaattgctgtgctgatagatgagcttaaaaa 160 |||||||||||| ||||| || | ||||| ||||||||||| |||||||||||||| || Sbjct: 94 gatggctatggtagatgaaccgttgtatcccattgctgtgcttatagatgagcttaagaa 153 Query: 161 tgaagatattcagttgcgcctgaactccatcagaagactttccactattgcacgggcact 220 ||| ||||||||| | || ||||||| ||| | | | || ||||| || || || || Sbjct: 154 tgatgatattcagcttcgtttgaactcgatccgtcgcttatctactatagctcgtgctct 213 Query: 221 tggagaagagcgaaccaggaaggaactgattcctttcctcagcgaaaacaatgatgatga 280 |||||| ||||| || |||||||| | || ||||| | || || || | ||| ||||| Sbjct: 214 tggagaggagcgtacaaggaaggagttaatcccttttttgagtgagaatagtgacgatga 273 Query: 281 agatgaagtgcttcttgcaatggctga 307 ||||| |||||||||||||||||||| Sbjct: 274 cgatgaggtgcttcttgcaatggctga 300
>gb|BT000108.1| Arabidopsis thaliana phosphoprotein phosphatase 2A regulatory subunit A (At1g25490) mRNA, complete cds Length = 1861 Score = 75.8 bits (38), Expect = 1e-10 Identities = 164/206 (79%) Strand = Plus / Plus Query: 102 atggctatggtcgatgagcctctctatccaattgctgtgctgatagatgagcttaaaaat 161 ||||||||||| ||||| || | ||||| ||||||||||| |||||||||||||| ||| Sbjct: 1 atggctatggtagatgaaccgttgtatcccattgctgtgcttatagatgagcttaagaat 60 Query: 162 gaagatattcagttgcgcctgaactccatcagaagactttccactattgcacgggcactt 221 || ||||||||| | || ||||||| ||| | | | || ||||| || || || ||| Sbjct: 61 gatgatattcagcttcgtttgaactcgatccgtcgcttatctactatagctcgtgctctt 120 Query: 222 ggagaagagcgaaccaggaaggaactgattcctttcctcagcgaaaacaatgatgatgaa 281 ||||| ||||| || |||||||| | || ||||| | || || || | ||| ||||| Sbjct: 121 ggagaggagcgtacaaggaaggagttaatcccttttttgagtgagaatagtgacgatgac 180 Query: 282 gatgaagtgcttcttgcaatggctga 307 ||||| |||||||||||||||||||| Sbjct: 181 gatgaggtgcttcttgcaatggctga 206
>ref|XM_319856.2| Anopheles gambiae str. PEST ENSANGP00000016496 (ENSANGG00000014007), partial mRNA Length = 1770 Score = 67.9 bits (34), Expect = 3e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 123 ctctatccaattgctgtgctgatagatgagcttaaaaatgaagatattcagttgcgcctg 182 |||||||| |||||||| |||| |||||||| |||||||||||||||||| | ||||| Sbjct: 31 ctctatccgattgctgttttgatcgatgagctgaaaaatgaagatattcagctccgccta 90 Query: 183 aactccatca 192 ||||| |||| Sbjct: 91 aactcgatca 100
>gb|AF196287.1|AF196287 Medicago sativa subsp. x varia Ser/Thr specific protein phosphatase 2A A regulatory subunit beta isoform mRNA, complete cds Length = 2163 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 330 tatgttggtggtgtagagcatgctcatgttttgcttccaccattggagac 379 |||||||||||||| || |||||| |||||||||||| || |||||||| Sbjct: 396 tatgttggtggtgttgatcatgctagtgttttgcttccgccgttggagac 445
>ref|NM_101203.3| Arabidopsis thaliana PDF2; protein phosphatase type 2A regulator AT1G13320 (PDF2) transcript variant AT1G13320.1 mRNA, complete cds Length = 2033 Score = 50.1 bits (25), Expect = 0.007 Identities = 61/73 (83%) Strand = Plus / Plus Query: 101 gatggctatggtcgatgagcctctctatccaattgctgtgctgatagatgagcttaaaaa 160 |||| ||||||| ||||||||| | || || ||||||||||| || || ||||| ||||| Sbjct: 89 gatgtctatggttgatgagcctttatacccgattgctgtgcttatcgacgagctaaaaaa 148 Query: 161 tgaagatattcag 173 || ||||||||| Sbjct: 149 cgatgatattcag 161
>ref|NM_001035958.1| Arabidopsis thaliana PDF2; protein phosphatase type 2A regulator AT1G13320 (PDF2) transcript variant AT1G13320.2 mRNA, complete cds Length = 2073 Score = 50.1 bits (25), Expect = 0.007 Identities = 61/73 (83%) Strand = Plus / Plus Query: 101 gatggctatggtcgatgagcctctctatccaattgctgtgctgatagatgagcttaaaaa 160 |||| ||||||| ||||||||| | || || ||||||||||| || || ||||| ||||| Sbjct: 90 gatgtctatggttgatgagcctttatacccgattgctgtgcttatcgacgagctaaaaaa 149 Query: 161 tgaagatattcag 173 || ||||||||| Sbjct: 150 cgatgatattcag 162
>gb|AY099760.1| Arabidopsis thaliana protein phosphatase 2A regulatory subunit, putative (At1g13320) mRNA, complete cds Length = 1996 Score = 50.1 bits (25), Expect = 0.007 Identities = 61/73 (83%) Strand = Plus / Plus Query: 101 gatggctatggtcgatgagcctctctatccaattgctgtgctgatagatgagcttaaaaa 160 |||| ||||||| ||||||||| | || || ||||||||||| || || ||||| ||||| Sbjct: 89 gatgtctatggttgatgagcctttatacccgattgctgtgcttatcgacgagctaaaaaa 148 Query: 161 tgaagatattcag 173 || ||||||||| Sbjct: 149 cgatgatattcag 161
>emb|BX815351.1|CNS0AE48 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS54ZC01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1957 Score = 50.1 bits (25), Expect = 0.007 Identities = 61/73 (83%) Strand = Plus / Plus Query: 101 gatggctatggtcgatgagcctctctatccaattgctgtgctgatagatgagcttaaaaa 160 |||| ||||||| ||||||||| | || || ||||||||||| || || ||||| ||||| Sbjct: 60 gatgtctatggttgatgagcctttatacccgattgctgtgcttatcgacgagctaaaaaa 119 Query: 161 tgaagatattcag 173 || ||||||||| Sbjct: 120 cgatgatattcag 132
>gb|AC011810.8|AC011810 Arabidopsis thaliana chromosome I BAC T6J4 genomic sequence, complete sequence Length = 103157 Score = 50.1 bits (25), Expect = 0.007 Identities = 61/73 (83%) Strand = Plus / Minus Query: 101 gatggctatggtcgatgagcctctctatccaattgctgtgctgatagatgagcttaaaaa 160 |||| ||||||| ||||||||| | || || ||||||||||| || || ||||| ||||| Sbjct: 45459 gatgtctatggttgatgagcctttatacccgattgctgtgcttatcgacgagctaaaaaa 45400 Query: 161 tgaagatattcag 173 || ||||||||| Sbjct: 45399 cgatgatattcag 45387
>gb|AC120528.5| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0014L17 map C996B, complete sequence Length = 78835 Score = 48.1 bits (24), Expect = 0.030 Identities = 27/28 (96%) Strand = Plus / Minus Query: 23 cctcgcctcctcgccccccttcgccgcc 50 ||||||||||||||| |||||||||||| Sbjct: 16783 cctcgcctcctcgccgcccttcgccgcc 16756
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 48.1 bits (24), Expect = 0.030 Identities = 27/28 (96%) Strand = Plus / Plus Query: 23 cctcgcctcctcgccccccttcgccgcc 50 ||||||||||||||| |||||||||||| Sbjct: 9905813 cctcgcctcctcgccgcccttcgccgcc 9905840
>gb|BT002601.1| Arabidopsis thaliana protein phosphatase 2A regulatory subunit, putative (At1g13320) mRNA, complete cds Length = 1794 Score = 48.1 bits (24), Expect = 0.030 Identities = 57/68 (83%) Strand = Plus / Plus Query: 106 ctatggtcgatgagcctctctatccaattgctgtgctgatagatgagcttaaaaatgaag 165 ||||||| ||||||||| | || || ||||||||||| || || ||||| ||||| || | Sbjct: 5 ctatggttgatgagcctttatacccgattgctgtgcttatcgacgagctaaaaaacgatg 64 Query: 166 atattcag 173 |||||||| Sbjct: 65 atattcag 72
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 48.1 bits (24), Expect = 0.030 Identities = 27/28 (96%) Strand = Plus / Plus Query: 23 cctcgcctcctcgccccccttcgccgcc 50 ||||||||||||||| |||||||||||| Sbjct: 9977510 cctcgcctcctcgccgcccttcgccgcc 9977537
>gb|BC064863.1| Xenopus tropicalis hypothetical protein MGC76072, mRNA (cDNA clone MGC:76072 IMAGE:5307699), complete cds Length = 2330 Score = 44.1 bits (22), Expect = 0.46 Identities = 31/34 (91%) Strand = Plus / Plus Query: 274 atgatgaagatgaagtgcttcttgcaatggctga 307 |||||||||||||||| |||||||| ||||||| Sbjct: 190 atgatgaagatgaagttcttcttgctttggctga 223
>emb|BX957342.5| Zebrafish DNA sequence from clone CH211-120P12 in linkage group 13, complete sequence Length = 182888 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 139 tgctgatagatgagcttaaaaatgaa 164 ||||||||||||||||| |||||||| Sbjct: 14278 tgctgatagatgagctttaaaatgaa 14303
>ref|NM_204074.1| Xenopus tropicalis hypothetical protein MGC76072 (MGC76072), mRNA Length = 2330 Score = 44.1 bits (22), Expect = 0.46 Identities = 31/34 (91%) Strand = Plus / Plus Query: 274 atgatgaagatgaagtgcttcttgcaatggctga 307 |||||||||||||||| |||||||| ||||||| Sbjct: 190 atgatgaagatgaagttcttcttgctttggctga 223
>emb|AL672179.9| Mouse DNA sequence from clone RP23-468C6 on chromosome X, complete sequence Length = 181910 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 284 tgaagtgcttcttgcaatggct 305 |||||||||||||||||||||| Sbjct: 97483 tgaagtgcttcttgcaatggct 97504
>emb|CR848503.2| Xenopus tropicalis finished cDNA, clone TEgg059c21 Length = 2334 Score = 44.1 bits (22), Expect = 0.46 Identities = 31/34 (91%) Strand = Plus / Plus Query: 274 atgatgaagatgaagtgcttcttgcaatggctga 307 |||||||||||||||| |||||||| ||||||| Sbjct: 258 atgatgaagatgaagttcttcttgctttggctga 291
>ref|NM_191070.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1626 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 268 acaatgatgatgaagatgaag 288 ||||||||||||||||||||| Sbjct: 1574 acaatgatgatgaagatgaag 1594
>gb|AC110903.25| Mus musculus chromosome 7, clone RP24-174G2, complete sequence Length = 181076 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 268 acaatgatgatgaagatgaag 288 ||||||||||||||||||||| Sbjct: 46092 acaatgatgatgaagatgaag 46112
>ref|XM_844383.1| PREDICTED: Canis familiaris hypothetical protein LOC607626 (LOC607626), mRNA Length = 997 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 269 caatgatgatgaagatgaagt 289 ||||||||||||||||||||| Sbjct: 724 caatgatgatgaagatgaagt 744
>ref|XM_748361.1| Aspergillus fumigatus Af293 protein kinase c (Afu5g11970) partial mRNA Length = 3321 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 113 cgatgagcctctctatccaat 133 ||||||||||||||||||||| Sbjct: 2985 cgatgagcctctctatccaat 3005
>gb|AC127561.4| Mus musculus BAC clone RP24-273G7 from chromosome 5, complete sequence Length = 202290 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 152 gcttaaaaatgaagatattca 172 ||||||||||||||||||||| Sbjct: 117785 gcttaaaaatgaagatattca 117805
>ref|XM_721911.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY06370) partial mRNA Length = 2316 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 264 gaaaacaatgatgatgaagatgaag 288 ||||||| ||||||||||||||||| Sbjct: 1027 gaaaacagtgatgatgaagatgaag 1051
>emb|AL939131.1|SCO939131 Streptomyces coelicolor A3(2) complete genome; segment 28/29 Length = 303550 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 20 cctcctcgcctcctcgccccc 40 ||||||||||||||||||||| Sbjct: 121736 cctcctcgcctcctcgccccc 121756
>emb|CR860555.1| Pongo pygmaeus mRNA; cDNA DKFZp459L047 (from clone DKFZp459L047) Length = 3694 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 269 caatgatgatgaagatgaagt 289 ||||||||||||||||||||| Sbjct: 779 caatgatgatgaagatgaagt 799
>gb|AC018529.12| Homo sapiens, clone RP11-4B16, complete sequence Length = 185590 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 295 ttgcaatggctgaagaattgg 315 ||||||||||||||||||||| Sbjct: 11482 ttgcaatggctgaagaattgg 11462
>dbj|AP003570.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0432B10 Length = 131918 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 268 acaatgatgatgaagatgaag 288 ||||||||||||||||||||| Sbjct: 114150 acaatgatgatgaagatgaag 114170
>gb|AC087711.5| Homo sapiens chromosome 8, clone RP11-172M18, complete sequence Length = 145905 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 265 aaaacaatgatgatgaagatg 285 ||||||||||||||||||||| Sbjct: 95822 aaaacaatgatgatgaagatg 95842
>gb|AC020741.4|AC020741 Homo sapiens BAC clone RP11-798L4 from 4, complete sequence Length = 191804 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 252 cctttcctcagcgaaaacaatgatgatga 280 ||||||||||| ||||| ||||||||||| Sbjct: 34859 cctttcctcagagaaaataatgatgatga 34831
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 268 acaatgatgatgaagatgaag 288 ||||||||||||||||||||| Sbjct: 34616856 acaatgatgatgaagatgaag 34616876 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 450 atgaaagaaaacgacattgt 469 |||||||||||||||||||| Sbjct: 32985136 atgaaagaaaacgacattgt 32985117
>gb|AC157949.1| Mus musculus BAC clone RP23-148A16 from chromosome 9, complete sequence Length = 204674 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 ctcctcgcctcctcgcccccc 41 ||||||||||||||||||||| Sbjct: 80663 ctcctcgcctcctcgcccccc 80643
>dbj|AP004331.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0085D07 Length = 172483 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 268 acaatgatgatgaagatgaag 288 ||||||||||||||||||||| Sbjct: 68873 acaatgatgatgaagatgaag 68893
>gb|AC093330.25| Homo sapiens chromosome 18, clone RP11-862L9, complete sequence Length = 198182 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 295 ttgcaatggctgaagaattgg 315 ||||||||||||||||||||| Sbjct: 147917 ttgcaatggctgaagaattgg 147897
>dbj|AK073886.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033075O06, full insert sequence Length = 1895 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 268 acaatgatgatgaagatgaag 288 ||||||||||||||||||||| Sbjct: 1589 acaatgatgatgaagatgaag 1609
>ref|XM_464147.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3121 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 290 gcttcttgcaatggctgaagaatt 313 |||| ||||||||||||||||||| Sbjct: 2010 gcttattgcaatggctgaagaatt 2033
>ref|XM_506717.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1008_C03.11 mRNA Length = 3169 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 290 gcttcttgcaatggctgaagaatt 313 |||| ||||||||||||||||||| Sbjct: 2017 gcttattgcaatggctgaagaatt 2040
>gb|AY724537.1| Rattus norvegicus clone UI-R-FJ0-cqb-a-24-0-UI unknown mRNA Length = 3391 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 269 caatgatgatgaagatgaag 288 |||||||||||||||||||| Sbjct: 1909 caatgatgatgaagatgaag 1928
>gb|BC079880.1| Mus musculus RIKEN cDNA 2310066E14 gene, mRNA (cDNA clone MGC:100216 IMAGE:6852251), complete cds Length = 4066 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 269 caatgatgatgaagatgaag 288 |||||||||||||||||||| Sbjct: 2630 caatgatgatgaagatgaag 2649
>ref|XM_709589.1| Candida albicans SC5314 hypothetical protein (CaO19.6976), mRNA Length = 1842 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 358 ttttgcttccaccattggag 377 |||||||||||||||||||| Sbjct: 234 ttttgcttccaccattggag 253
>gb|BC030451.1| Mus musculus RIKEN cDNA 2310066E14 gene, mRNA (cDNA clone MGC:40645 IMAGE:5400266), complete cds Length = 3209 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 269 caatgatgatgaagatgaag 288 |||||||||||||||||||| Sbjct: 1779 caatgatgatgaagatgaag 1798
>ref|XM_706922.1| Candida albicans SC5314 hypothetical protein (CaO19.8264), mRNA Length = 2913 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 269 caatgatgatgaagatgaag 288 |||||||||||||||||||| Sbjct: 1155 caatgatgatgaagatgaag 1174
>ref|XM_706921.1| Candida albicans SC5314 hypothetical protein (CaO19.8263), mRNA Length = 426 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 269 caatgatgatgaagatgaag 288 |||||||||||||||||||| Sbjct: 52 caatgatgatgaagatgaag 33
>ref|XM_706901.1| Candida albicans SC5314 hypothetical protein (CaO19.649), mRNA Length = 2913 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 269 caatgatgatgaagatgaag 288 |||||||||||||||||||| Sbjct: 1155 caatgatgatgaagatgaag 1174
>ref|XM_706900.1| Candida albicans SC5314 hypothetical protein (CaO19.648), mRNA Length = 426 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 269 caatgatgatgaagatgaag 288 |||||||||||||||||||| Sbjct: 52 caatgatgatgaagatgaag 33
>gb|AC122487.3| Mus musculus BAC clone RP24-381E21 from chromosome 17, complete sequence Length = 149666 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 aacaatgatgatgaagatga 286 |||||||||||||||||||| Sbjct: 64308 aacaatgatgatgaagatga 64289
>ref|XM_994701.1| PREDICTED: Mus musculus RIKEN cDNA 2310066E14 gene (2310066E14Rik), mRNA Length = 4141 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 269 caatgatgatgaagatgaag 288 |||||||||||||||||||| Sbjct: 2710 caatgatgatgaagatgaag 2729
>ref|XM_915483.2| PREDICTED: Mus musculus RIKEN cDNA 2310066E14 gene, transcript variant 4 (2310066E14Rik), mRNA Length = 4282 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 269 caatgatgatgaagatgaag 288 |||||||||||||||||||| Sbjct: 2851 caatgatgatgaagatgaag 2870
>ref|XM_486159.3| PREDICTED: Mus musculus RIKEN cDNA 2310066E14 gene, transcript variant 1 (2310066E14Rik), mRNA Length = 4282 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 269 caatgatgatgaagatgaag 288 |||||||||||||||||||| Sbjct: 2851 caatgatgatgaagatgaag 2870
>gb|AC114825.4| Mus musculus BAC clone RP24-104P22 from chromosome 3, complete sequence Length = 202237 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 494 gaggctagcagctggtgagt 513 |||||||||||||||||||| Sbjct: 166344 gaggctagcagctggtgagt 166363
>emb|BX908750.17| Zebrafish DNA sequence from clone DKEY-193E13 in linkage group 2, complete sequence Length = 171327 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 499 tagcagctggtgagtggttt 518 |||||||||||||||||||| Sbjct: 10592 tagcagctggtgagtggttt 10573
>ref|XM_808334.1| Trypanosoma cruzi strain CL Brener mucin-associated surface protein (MASP) (Tc00.1047053510371.70) partial mRNA Length = 816 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 271 atgatgatgaagatgaagtg 290 |||||||||||||||||||| Sbjct: 365 atgatgatgaagatgaagtg 384
>gb|AC127419.3| Mus musculus BAC clone RP24-242N1 from chromosome 8, complete sequence Length = 167099 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 269 caatgatgatgaagatgaag 288 |||||||||||||||||||| Sbjct: 109983 caatgatgatgaagatgaag 110002
>emb|Z49066.1|CEC04H4 Caenorhabditis elegans Cosmid C04H4, complete sequence Length = 33421 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 271 atgatgatgaagatgaagtg 290 |||||||||||||||||||| Sbjct: 29769 atgatgatgaagatgaagtg 29750
>gb|AC160933.3| Mus musculus BAC clone RP24-172H5 from chromosome 3, complete sequence Length = 158302 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 494 gaggctagcagctggtgagt 513 |||||||||||||||||||| Sbjct: 56978 gaggctagcagctggtgagt 56997
>gb|AC145574.5| Mus musculus BAC clone RP24-411C16 from chromosome 6, complete sequence Length = 147836 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 aacaatgatgatgaagatga 286 |||||||||||||||||||| Sbjct: 71957 aacaatgatgatgaagatga 71938
>emb|AL512655.17| Human DNA sequence from clone RP11-536C2 on chromosome 13, complete sequence Length = 146002 Score = 40.1 bits (20), Expect = 7.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 340 gtgtagagcatgctcatgttttgcttccacca 371 ||||| || |||||||||||||||||| |||| Sbjct: 117429 gtgtacagtatgctcatgttttgcttcaacca 117460
>emb|AL353148.8| Human DNA sequence from clone RP11-298H24 on chromosome 10 Contains a novel gene, complete sequence Length = 181308 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 233 aaccaggaaggaactgattccttt 256 |||||||||| ||||||||||||| Sbjct: 116119 aaccaggaagaaactgattccttt 116096
>gb|AC129852.5| Homo sapiens X BAC RP11-540E20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 170072 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 341 tgtagagcatgctcatgttt 360 |||||||||||||||||||| Sbjct: 67154 tgtagagcatgctcatgttt 67135
>emb|Z54354.1|SPAC2G11 S.pombe chromosome I cosmid c2G11 Length = 36162 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 269 caatgatgatgaagatgaag 288 |||||||||||||||||||| Sbjct: 34682 caatgatgatgaagatgaag 34701
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 318 gtgttcattccttatgttggtggt 341 ||||||||||||| |||||||||| Sbjct: 4804281 gtgttcattccttgtgttggtggt 4804258
>ref|NM_205139.1| Gallus gallus SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 (SMARCA2), mRNA Length = 4707 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 263 cgaaaacaatgatgatgaagatga 286 ||||| |||||||||||||||||| Sbjct: 4476 cgaaagcaatgatgatgaagatga 4499
>dbj|BA000032.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromosome 2, complete sequence Length = 1877212 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 tgctgatagatgagcttaaa 158 |||||||||||||||||||| Sbjct: 429550 tgctgatagatgagcttaaa 429569
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 cctcgccccccttcgccgcc 50 |||||||||||||||||||| Sbjct: 4755222 cctcgccccccttcgccgcc 4755203
>ref|NM_137510.2| Drosophila melanogaster CG30122-RB (CG30122), mRNA Length = 4617 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 263 cgaaaacaatgatgatgaagatga 286 ||||||||||||||| |||||||| Sbjct: 2180 cgaaaacaatgatgaagaagatga 2203
>gb|AC099028.1| Drosophila melanogaster, chromosome 2R, region 55F-56X, BAC clone BACR08F09, complete sequence Length = 192358 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 263 cgaaaacaatgatgatgaagatga 286 ||||||||||||||| |||||||| Sbjct: 10921 cgaaaacaatgatgaagaagatga 10898
>dbj|AK052316.1| Mus musculus 13 days embryo heart cDNA, RIKEN full-length enriched library, clone:D330027C19 product:similar to CDNA FLJ13725 FIS, CLONE PLACE3000009, WEAKLY SIMILAR TO DNA-DIRECTED RNA POLYMERASE II LARGEST SUBUNIT (EC 2.7.7.6) [Homo sapiens], full insert sequence Length = 3876 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 269 caatgatgatgaagatgaag 288 |||||||||||||||||||| Sbjct: 2597 caatgatgatgaagatgaag 2616
>ref|NM_001018492.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPAC2G11.14), partial mRNA Length = 2940 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 269 caatgatgatgaagatgaag 288 |||||||||||||||||||| Sbjct: 2109 caatgatgatgaagatgaag 2128
>ref|NM_182172.3| Caenorhabditis elegans DH11.5b (DH11.5) mRNA, complete cds Length = 1547 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 271 atgatgatgaagatgaagtg 290 |||||||||||||||||||| Sbjct: 292 atgatgatgaagatgaagtg 273
>ref|NM_063271.3| Caenorhabditis elegans DH11.5a (DH11.5) mRNA, complete cds Length = 1648 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 271 atgatgatgaagatgaagtg 290 |||||||||||||||||||| Sbjct: 292 atgatgatgaagatgaagtg 273
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 290 gcttcttgcaatggctgaagaatt 313 |||| ||||||||||||||||||| Sbjct: 2569043 gcttattgcaatggctgaagaatt 2569066
>gb|AC009850.10|AC009850 Drosophila melanogaster, chromosome 2R, region 55E-55F, BAC clone BACR27L09, complete sequence Length = 173059 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 263 cgaaaacaatgatgatgaagatga 286 ||||||||||||||| |||||||| Sbjct: 171952 cgaaaacaatgatgaagaagatga 171929
>gb|AC019201.6| Homo sapiens BAC clone RP11-383I5 from 2, complete sequence Length = 168011 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 gaaccaggaaggaactgatt 251 |||||||||||||||||||| Sbjct: 58536 gaaccaggaaggaactgatt 58517
>dbj|BA000031.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromosome 1, complete sequence Length = 3288558 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 tgctgatagatgagcttaaa 158 |||||||||||||||||||| Sbjct: 672378 tgctgatagatgagcttaaa 672397
>gb|BT003578.1| Drosophila melanogaster LD24631 full insert cDNA Length = 2519 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 263 cgaaaacaatgatgatgaagatga 286 ||||||||||||||| |||||||| Sbjct: 274 cgaaaacaatgatgaagaagatga 297
>ref|XM_214666.3| PREDICTED: Rattus norvegicus similar to mKIAA1930 protein (predicted) (LOC291974), mRNA Length = 4234 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 269 caatgatgatgaagatgaag 288 |||||||||||||||||||| Sbjct: 2784 caatgatgatgaagatgaag 2803
>gb|AC174081.1| Mus musculus BAC clone RP24-376P15 from chromosome 6, complete sequence Length = 153392 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 aacaatgatgatgaagatga 286 |||||||||||||||||||| Sbjct: 153201 aacaatgatgatgaagatga 153182
>dbj|AP003224.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0010B10 Length = 155263 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 450 atgaaagaaaacgacattgt 469 |||||||||||||||||||| Sbjct: 51364 atgaaagaaaacgacattgt 51345
>dbj|AP005288.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1008_C03 Length = 103297 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 290 gcttcttgcaatggctgaagaatt 313 |||| ||||||||||||||||||| Sbjct: 47826 gcttattgcaatggctgaagaatt 47849
>emb|X91638.1|GGBRMPROT G.gallus mRNA for BRM protein Length = 4707 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 263 cgaaaacaatgatgatgaagatga 286 ||||| |||||||||||||||||| Sbjct: 4476 cgaaagcaatgatgatgaagatga 4499
>dbj|AK121963.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033108C09, full insert sequence Length = 3120 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 290 gcttcttgcaatggctgaagaatt 313 |||| ||||||||||||||||||| Sbjct: 2009 gcttattgcaatggctgaagaatt 2032
>dbj|AK105609.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-B03, full insert sequence Length = 3169 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 290 gcttcttgcaatggctgaagaatt 313 |||| ||||||||||||||||||| Sbjct: 2017 gcttattgcaatggctgaagaatt 2040
>gb|AE003798.3| Drosophila melanogaster chromosome 2R, section 52 of 73 of the complete sequence Length = 242365 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 263 cgaaaacaatgatgatgaagatga 286 ||||||||||||||| |||||||| Sbjct: 7385 cgaaaacaatgatgaagaagatga 7362
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 cctcgccccccttcgccgcc 50 |||||||||||||||||||| Sbjct: 4759240 cctcgccccccttcgccgcc 4759221
>dbj|AK122573.1| Mus musculus mRNA for mKIAA1930 protein Length = 4085 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 269 caatgatgatgaagatgaag 288 |||||||||||||||||||| Sbjct: 2690 caatgatgatgaagatgaag 2709
>gb|BC099098.1| Rattus norvegicus similar to mKIAA1930 protein, mRNA (cDNA clone IMAGE:7459580), partial cds Length = 3082 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 269 caatgatgatgaagatgaag 288 |||||||||||||||||||| Sbjct: 1647 caatgatgatgaagatgaag 1666
>emb|BX465204.5| Zebrafish DNA sequence from clone CH211-160N19 in linkage group 22, complete sequence Length = 168776 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 499 tagcagctggtgagtggttt 518 |||||||||||||||||||| Sbjct: 9861 tagcagctggtgagtggttt 9842
>gb|AC004429.1|AC004429 Drosophila melanogaster DNA sequence (P1 DS01552 (D182)), complete sequence Length = 51536 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 263 cgaaaacaatgatgatgaagatga 286 ||||||||||||||| |||||||| Sbjct: 5960 cgaaaacaatgatgaagaagatga 5937
>gb|AC127693.4| Mus musculus BAC clone RP23-135G19 from 17, complete sequence Length = 223894 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 aacaatgatgatgaagatga 286 |||||||||||||||||||| Sbjct: 212991 aacaatgatgatgaagatga 212972
>dbj|AP006378.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT44A10, TM0223, complete sequence Length = 101752 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 269 caatgatgatgaagatgaag 288 |||||||||||||||||||| Sbjct: 24321 caatgatgatgaagatgaag 24340
>dbj|AP003484.2| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-734C14, complete sequence Length = 206750 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 tcagttgcgcctgaactcca 189 |||||||||||||||||||| Sbjct: 83256 tcagttgcgcctgaactcca 83275 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,811,691 Number of Sequences: 3902068 Number of extensions: 4811691 Number of successful extensions: 114592 Number of sequences better than 10.0: 118 Number of HSP's better than 10.0 without gapping: 118 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 114030 Number of HSP's gapped (non-prelim): 556 length of query: 532 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 509 effective length of database: 17,143,297,704 effective search space: 8725938531336 effective search space used: 8725938531336 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
