ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags12h24 |
|---|---|
| Clone Library Name | barley_pub |
>CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 266 Score = 75.9 bits (185), Expect = 3e-14 Identities = 36/44 (81%), Positives = 40/44 (90%) Frame = +1 Query: 46 GKSVKNVASSALFGEARVTMRKTAAKAKQVSSGSPWYGADRVLY 177 GK+VKN+ SSAL G+ARV MRKTAAKAKQVSS SPWYG+DRVLY Sbjct: 15 GKAVKNLPSSALIGDARVNMRKTAAKAKQVSSSSPWYGSDRVLY 58
>CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 265 Score = 63.5 bits (153), Expect = 1e-10 Identities = 32/37 (86%), Positives = 33/37 (89%), Gaps = 1/37 (2%) Frame = +1 Query: 70 SSALFGEARVTMRKTAAKAK-QVSSGSPWYGADRVLY 177 SSALFGEAR+TMRKTAAK K SSGSPWYGADRVLY Sbjct: 21 SSALFGEARITMRKTAAKPKPAASSGSPWYGADRVLY 57
>CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloroplast precursor| (LHCII type I CAB-M9) (LHCP) Length = 265 Score = 62.8 bits (151), Expect = 2e-10 Identities = 37/45 (82%), Positives = 38/45 (84%), Gaps = 1/45 (2%) Frame = +1 Query: 46 GKSVKNVASSALFGEARVTMRKTAAKAK-QVSSGSPWYGADRVLY 177 GK+V NV SS LFGEARVTMRKTAAKAK SSGSPWYG DRVLY Sbjct: 15 GKAV-NVPSS-LFGEARVTMRKTAAKAKPAASSGSPWYGPDRVLY 57
>CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 265 Score = 60.5 bits (145), Expect = 1e-09 Identities = 35/45 (77%), Positives = 38/45 (84%), Gaps = 1/45 (2%) Frame = +1 Query: 46 GKSVKNVASSALFGEARVTMRKTAAKAK-QVSSGSPWYGADRVLY 177 GK+V NV SS+ FGEARVTMRKTAAKAK +SGSPWYG DRVLY Sbjct: 15 GKAV-NVPSSS-FGEARVTMRKTAAKAKPAAASGSPWYGPDRVLY 57
>CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 261 Score = 60.1 bits (144), Expect = 2e-09 Identities = 26/37 (70%), Positives = 32/37 (86%) Frame = +1 Query: 67 ASSALFGEARVTMRKTAAKAKQVSSGSPWYGADRVLY 177 A++ +FGE R+TMRK+AAK K +SGSPWYGADRVLY Sbjct: 17 AAAKVFGEGRITMRKSAAKPKPAASGSPWYGADRVLY 53
>CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloroplast precursor| (LHCII type I CAB-40) (LHCP) Length = 267 Score = 59.7 bits (143), Expect = 2e-09 Identities = 30/45 (66%), Positives = 36/45 (80%), Gaps = 1/45 (2%) Frame = +1 Query: 46 GKSVK-NVASSALFGEARVTMRKTAAKAKQVSSGSPWYGADRVLY 177 GK+VK + +SS + G +VTMRKTA+KAK VSSGSPWYG DRV Y Sbjct: 15 GKAVKLSPSSSEITGNGKVTMRKTASKAKTVSSGSPWYGPDRVKY 59
>CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloroplast precursor| (LHCII type I CAB-16) (LHCP) Length = 266 Score = 59.3 bits (142), Expect = 3e-09 Identities = 30/45 (66%), Positives = 36/45 (80%), Gaps = 1/45 (2%) Frame = +1 Query: 46 GKSVK-NVASSALFGEARVTMRKTAAKAKQVSSGSPWYGADRVLY 177 GK+VK + +SS + G +VTMRKTA+KAK VSSGSPWYG DRV Y Sbjct: 14 GKAVKLSPSSSEVTGNGKVTMRKTASKAKPVSSGSPWYGPDRVKY 58
>CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloroplast precursor| (LHCII type I CAB-48) (LHCP) Length = 264 Score = 58.9 bits (141), Expect = 4e-09 Identities = 26/33 (78%), Positives = 28/33 (84%) Frame = +1 Query: 79 LFGEARVTMRKTAAKAKQVSSGSPWYGADRVLY 177 +FGE R+TMRKTAAK K SGSPWYGADRVLY Sbjct: 24 VFGEGRITMRKTAAKPKPARSGSPWYGADRVLY 56
>CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloroplast precursor| (LHCII type I CAB-3C) (LHCP) Length = 267 Score = 58.9 bits (141), Expect = 4e-09 Identities = 30/45 (66%), Positives = 34/45 (75%), Gaps = 1/45 (2%) Frame = +1 Query: 46 GKSVK-NVASSALFGEARVTMRKTAAKAKQVSSGSPWYGADRVLY 177 GK+VK + +SS + G RVTMRKTA KAK SSGSPWYG DRV Y Sbjct: 15 GKAVKLSPSSSEITGNGRVTMRKTATKAKPASSGSPWYGPDRVKY 59
>CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloroplast precursor| (LHCII type I CAB-E) (LHCP) Length = 266 Score = 58.2 bits (139), Expect = 6e-09 Identities = 30/45 (66%), Positives = 35/45 (77%), Gaps = 1/45 (2%) Frame = +1 Query: 46 GKSVK-NVASSALFGEARVTMRKTAAKAKQVSSGSPWYGADRVLY 177 GK+VK + +SS + G +VTMRKTA KAK VSSGSPWYG DRV Y Sbjct: 14 GKAVKLSPSSSEVTGNGKVTMRKTANKAKPVSSGSPWYGPDRVKY 58
>CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloroplast precursor| (LHCII type I CAB-25) (LHCP) Length = 266 Score = 57.4 bits (137), Expect = 1e-08 Identities = 27/44 (61%), Positives = 31/44 (70%) Frame = +1 Query: 46 GKSVKNVASSALFGEARVTMRKTAAKAKQVSSGSPWYGADRVLY 177 GK+V +SS + G + TMRKT KAK VSSGSPWYG DRV Y Sbjct: 15 GKAVNVPSSSQITGNGKATMRKTVTKAKPVSSGSPWYGPDRVKY 58
>CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloroplast precursor| (LHCII type I CAB-50) (LHCP) Length = 267 Score = 56.6 bits (135), Expect = 2e-08 Identities = 28/45 (62%), Positives = 34/45 (75%), Gaps = 1/45 (2%) Frame = +1 Query: 46 GKSVK-NVASSALFGEARVTMRKTAAKAKQVSSGSPWYGADRVLY 177 GK+VK + +SS + G +VTMRKT KAK +SSGSPWYG DRV Y Sbjct: 15 GKAVKLSPSSSEITGNGKVTMRKTVTKAKPLSSGSPWYGPDRVKY 59
>CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chloroplast precursor| (LHCII type I CAB-22L) (LHCP) Length = 267 Score = 56.6 bits (135), Expect = 2e-08 Identities = 29/45 (64%), Positives = 33/45 (73%), Gaps = 1/45 (2%) Frame = +1 Query: 46 GKSVK-NVASSALFGEARVTMRKTAAKAKQVSSGSPWYGADRVLY 177 GK VK + +SS + G + TMRKTA KAK VSSGSPWYG DRV Y Sbjct: 15 GKVVKLSPSSSEITGNGKATMRKTATKAKPVSSGSPWYGPDRVKY 59
>CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chloroplast precursor| (LHCII type I CAB-91R) (LHCP) Length = 267 Score = 56.2 bits (134), Expect = 2e-08 Identities = 28/45 (62%), Positives = 33/45 (73%), Gaps = 1/45 (2%) Frame = +1 Query: 46 GKSVK-NVASSALFGEARVTMRKTAAKAKQVSSGSPWYGADRVLY 177 GK+VK + +SS + G + TMRKT KAK VSSGSPWYG DRV Y Sbjct: 15 GKAVKFSPSSSEITGNGKATMRKTVTKAKPVSSGSPWYGPDRVKY 59
>CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type I CAB-13) (LHCP) Length = 266 Score = 55.8 bits (133), Expect = 3e-08 Identities = 27/44 (61%), Positives = 31/44 (70%) Frame = +1 Query: 46 GKSVKNVASSALFGEARVTMRKTAAKAKQVSSGSPWYGADRVLY 177 GK+V +SS + +VTMRKT KAK VSSGSPWYG DRV Y Sbjct: 15 GKAVNVPSSSEITRNGKVTMRKTVTKAKPVSSGSPWYGPDRVKY 58
>CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloroplast precursor| (LHCII type I CAB-C) (LHCP) Length = 267 Score = 55.5 bits (132), Expect = 4e-08 Identities = 28/45 (62%), Positives = 35/45 (77%), Gaps = 1/45 (2%) Frame = +1 Query: 46 GKSVK-NVASSALFGEARVTMRKTAAKAKQVSSGSPWYGADRVLY 177 GK+VK + +SS + G +VTMRKTA+KAK VSS SPWYG +RV Y Sbjct: 15 GKAVKLSPSSSEITGNGKVTMRKTASKAKPVSSSSPWYGPNRVKY 59
>CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 267 Score = 55.1 bits (131), Expect = 5e-08 Identities = 27/45 (60%), Positives = 31/45 (68%), Gaps = 1/45 (2%) Frame = +1 Query: 46 GKSVK-NVASSALFGEARVTMRKTAAKAKQVSSGSPWYGADRVLY 177 GK+VK +S + GE R+TMRKTA K K V S SPWYG DRV Y Sbjct: 15 GKAVKLGPTASEIIGEGRITMRKTAGKPKTVQSSSPWYGPDRVKY 59
>CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chloroplast precursor| (LHCII type I CAB-22R) (LHCP) Length = 267 Score = 53.9 bits (128), Expect = 1e-07 Identities = 27/45 (60%), Positives = 32/45 (71%), Gaps = 1/45 (2%) Frame = +1 Query: 46 GKSVK-NVASSALFGEARVTMRKTAAKAKQVSSGSPWYGADRVLY 177 GK+VK + +SS + G +VTMRKT KAK SS SPWYG DRV Y Sbjct: 15 GKAVKLSSSSSEITGNGKVTMRKTVTKAKPASSSSPWYGPDRVKY 59
>CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloroplast precursor| (LHCII type I CAB-7) (LHCP) Length = 267 Score = 52.0 bits (123), Expect = 4e-07 Identities = 26/45 (57%), Positives = 31/45 (68%), Gaps = 1/45 (2%) Frame = +1 Query: 46 GKSVK-NVASSALFGEARVTMRKTAAKAKQVSSGSPWYGADRVLY 177 G +VK + +SS + G + MRKT KAK VSSGSPWYG DRV Y Sbjct: 15 GNAVKLSPSSSEITGNGKAIMRKTVTKAKPVSSGSPWYGPDRVKY 59
>CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 262 Score = 51.6 bits (122), Expect = 6e-07 Identities = 22/32 (68%), Positives = 24/32 (75%) Frame = +1 Query: 82 FGEARVTMRKTAAKAKQVSSGSPWYGADRVLY 177 FGE R+TMRKT K K +SGSPWYG DRV Y Sbjct: 23 FGEGRITMRKTVGKPKVAASGSPWYGPDRVKY 54
>CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloroplast| precursor (LHCII type I CAB-AB80) (LHCP) Length = 269 Score = 51.2 bits (121), Expect = 7e-07 Identities = 26/44 (59%), Positives = 28/44 (63%) Frame = +1 Query: 46 GKSVKNVASSALFGEARVTMRKTAAKAKQVSSGSPWYGADRVLY 177 GK +K SS G AR TMRK+A K SSGSPWYG DRV Y Sbjct: 18 GKQLKLNPSSQELGAARFTMRKSATTKKVASSGSPWYGPDRVKY 61
>CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (CAB-140) (LHCP) Length = 267 Score = 51.2 bits (121), Expect = 7e-07 Identities = 28/45 (62%), Positives = 33/45 (73%), Gaps = 1/45 (2%) Frame = +1 Query: 46 GKSVK-NVASSALFGEARVTMRKTAAKAKQVSSGSPWYGADRVLY 177 GK+VK + A+S + G RVTMRKT AK K SGSPWYG+DRV Y Sbjct: 15 GKAVKLSPAASEVLGSGRVTMRKTVAKPKG-PSGSPWYGSDRVKY 58
>CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 264 Score = 51.2 bits (121), Expect = 7e-07 Identities = 28/45 (62%), Positives = 35/45 (77%), Gaps = 1/45 (2%) Frame = +1 Query: 46 GKSVKNVASSA-LFGEARVTMRKTAAKAKQVSSGSPWYGADRVLY 177 GK+VKN++SS+ + G+ARV+MRKTAA K GSPWYG DRV Y Sbjct: 15 GKAVKNLSSSSEVQGDARVSMRKTAATKKV---GSPWYGPDRVKY 56
>CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chloroplast| precursor (LHCII type I CAB-165/180) Length = 267 Score = 49.3 bits (116), Expect = 3e-06 Identities = 27/45 (60%), Positives = 32/45 (71%), Gaps = 1/45 (2%) Frame = +1 Query: 46 GKSVK-NVASSALFGEARVTMRKTAAKAKQVSSGSPWYGADRVLY 177 GK+V + A+S + G RVTMRKT AK K SGSPWYG+DRV Y Sbjct: 15 GKAVNLSPAASEVLGSGRVTMRKTVAKPKG-PSGSPWYGSDRVKY 58
>CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast precursor| (LHCII type I CAB-8) Length = 268 Score = 48.5 bits (114), Expect = 5e-06 Identities = 27/46 (58%), Positives = 29/46 (63%), Gaps = 2/46 (4%) Frame = +1 Query: 46 GKSVKNVA--SSALFGEARVTMRKTAAKAKQVSSGSPWYGADRVLY 177 GK V+ A SS G AR TMRK+A K SSGSPWYG DRV Y Sbjct: 15 GKPVETSANPSSQELGGARFTMRKSATTKKVASSGSPWYGPDRVKY 60
>CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 256 Score = 47.8 bits (112), Expect = 8e-06 Identities = 25/44 (56%), Positives = 30/44 (68%) Frame = +1 Query: 46 GKSVKNVASSALFGEARVTMRKTAAKAKQVSSGSPWYGADRVLY 177 G+++K S+ G RV+MRKTA K VSSGSPWYG DRV Y Sbjct: 15 GQAMKLAPSTPELGVGRVSMRKTAPKT--VSSGSPWYGPDRVKY 56
>CB2F_LYCES (P14277) Chlorophyll a-b binding protein 3B, chloroplast precursor| (LHCII type I CAB-3B) (LHCP) (Fragments) Length = 267 Score = 45.8 bits (107), Expect = 3e-05 Identities = 23/37 (62%), Positives = 28/37 (75%), Gaps = 1/37 (2%) Frame = +1 Query: 46 GKSVK-NVASSALFGEARVTMRKTAAKAKQVSSGSPW 153 GK+VK + +SS + G R+TMRKTAAK K SSGSPW Sbjct: 15 GKAVKLSPSSSEISGNGRITMRKTAAKPKPASSGSPW 51
>CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) (Fragment) Length = 255 Score = 45.4 bits (106), Expect = 4e-05 Identities = 22/31 (70%), Positives = 25/31 (80%) Frame = +1 Query: 85 GEARVTMRKTAAKAKQVSSGSPWYGADRVLY 177 G A+ TMRKTA+K+ VSSGSPWYG DRV Y Sbjct: 19 GNAKFTMRKTASKS--VSSGSPWYGPDRVKY 47
>CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloroplast precursor| (LHCII type I CAB-3) (LHCP) Length = 263 Score = 45.4 bits (106), Expect = 4e-05 Identities = 27/44 (61%), Positives = 30/44 (68%) Frame = +1 Query: 46 GKSVKNVASSALFGEARVTMRKTAAKAKQVSSGSPWYGADRVLY 177 GK+VK S+ G RV+MRKT K QVSSGSPWYG DRV Y Sbjct: 16 GKAVKLGPSAPEVG--RVSMRKTVTK--QVSSGSPWYGPDRVKY 55
>CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 266 Score = 45.4 bits (106), Expect = 4e-05 Identities = 25/45 (55%), Positives = 30/45 (66%), Gaps = 1/45 (2%) Frame = +1 Query: 46 GKSVK-NVASSALFGEARVTMRKTAAKAKQVSSGSPWYGADRVLY 177 GK+VK + +S +FG RVTMRKT SGSPWYG+DRV Y Sbjct: 15 GKAVKLSPGASEVFGTGRVTMRKTVKPTGP--SGSPWYGSDRVKY 57
>CB2E_LYCES (P14276) Chlorophyll a-b binding protein 3A, chloroplast precursor| (LHCII type I CAB-3A) (LHCP) (Fragments) Length = 267 Score = 45.1 bits (105), Expect = 5e-05 Identities = 23/37 (62%), Positives = 27/37 (72%), Gaps = 1/37 (2%) Frame = +1 Query: 46 GKSVKNVASSA-LFGEARVTMRKTAAKAKQVSSGSPW 153 GK+VK SS+ + G R+TMRKTAAK K SSGSPW Sbjct: 15 GKTVKLAPSSSEITGNGRITMRKTAAKPKPASSGSPW 51
>CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) (Fragment) Length = 245 Score = 45.1 bits (105), Expect = 5e-05 Identities = 23/36 (63%), Positives = 26/36 (72%) Frame = +1 Query: 70 SSALFGEARVTMRKTAAKAKQVSSGSPWYGADRVLY 177 S+ G RV+MRKTA+K VSSGSPWYG DRV Y Sbjct: 4 STPQLGVGRVSMRKTASKT--VSSGSPWYGPDRVKY 37
>CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast precursor| (Allergen Api g 3) Length = 264 Score = 44.3 bits (103), Expect = 9e-05 Identities = 26/45 (57%), Positives = 29/45 (64%), Gaps = 1/45 (2%) Frame = +1 Query: 46 GKSVKNVASSA-LFGEARVTMRKTAAKAKQVSSGSPWYGADRVLY 177 GK+VK SS+ LFG RV+MRKT K S SPWYG DRV Y Sbjct: 15 GKAVKVAPSSSELFGNGRVSMRKTV---KAPVSDSPWYGPDRVKY 56
>CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 member 1B,| chloroplast precursor (Chlorophyll a-b binding protein type II 1B) (CAB) (LHCP) Length = 274 Score = 43.1 bits (100), Expect = 2e-04 Identities = 22/36 (61%), Positives = 24/36 (66%), Gaps = 1/36 (2%) Frame = +1 Query: 73 SALFGEARVTMRKTAAKAKQVS-SGSPWYGADRVLY 177 + + GEARVTMRK K S S SPWYG DRVLY Sbjct: 31 AGVHGEARVTMRKATTKKLTASASTSPWYGPDRVLY 66
>CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloroplast precursor| (LHCII type I CAB-1B) (LHCP) Length = 265 Score = 42.4 bits (98), Expect = 3e-04 Identities = 23/45 (51%), Positives = 30/45 (66%), Gaps = 1/45 (2%) Frame = +1 Query: 46 GKSVK-NVASSALFGEARVTMRKTAAKAKQVSSGSPWYGADRVLY 177 G++VK + ++S + G R+TMRK A AK S SPWYG DRV Y Sbjct: 15 GQAVKLSPSASEISGNGRITMRK--AVAKSAPSSSPWYGPDRVKY 57
>CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloroplast precursor| (LHCII type I CAB-21) (LHCP) Length = 265 Score = 42.4 bits (98), Expect = 3e-04 Identities = 23/45 (51%), Positives = 31/45 (68%), Gaps = 1/45 (2%) Frame = +1 Query: 46 GKSVK-NVASSALFGEARVTMRKTAAKAKQVSSGSPWYGADRVLY 177 G++VK + ++ + G RV+MRKT AK V+S SPWYG DRV Y Sbjct: 15 GQAVKLSPSAPEITGNGRVSMRKTVAKP--VASSSPWYGPDRVKY 57
>CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 member 1A,| chloroplast precursor (Chlorophyll a-b binding protein type II 1A) (CAB) (LHCP) Length = 278 Score = 42.0 bits (97), Expect = 5e-04 Identities = 21/32 (65%), Positives = 23/32 (71%), Gaps = 1/32 (3%) Frame = +1 Query: 85 GEARVTMRK-TAAKAKQVSSGSPWYGADRVLY 177 GEAR+TMRK T K+ S SPWYG DRVLY Sbjct: 39 GEARLTMRKATGKKSVAASIDSPWYGPDRVLY 70
>CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloroplast precursor| (LHCII type II CAB-1A) (LHCP) Length = 278 Score = 41.2 bits (95), Expect = 8e-04 Identities = 20/32 (62%), Positives = 23/32 (71%), Gaps = 1/32 (3%) Frame = +1 Query: 85 GEARVTMRK-TAAKAKQVSSGSPWYGADRVLY 177 GEAR+TMRK T K+ S SPWYG DRV+Y Sbjct: 39 GEARLTMRKATGRKSVAASIDSPWYGPDRVMY 70
>CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 member F3,| chloroplast precursor (DE Chlorophyll a-b binding protein type I F3) (CAB-F3) (LHCP) Length = 265 Score = 34.7 bits (78), Expect = 0.072 Identities = 20/43 (46%), Positives = 24/43 (55%) Frame = +1 Query: 49 KSVKNVASSALFGEARVTMRKTAAKAKQVSSGSPWYGADRVLY 177 K V ++ GEARV M +KA SGS WYG+DR LY Sbjct: 18 KPVNELSRKVGAGEARVQMMAPKSKAP---SGSIWYGSDRPLY 57
>CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloroplast precursor| (LHCII type I CAB-4) (LHCP) Length = 265 Score = 34.3 bits (77), Expect = 0.094 Identities = 17/32 (53%), Positives = 19/32 (59%) Frame = +1 Query: 82 FGEARVTMRKTAAKAKQVSSGSPWYGADRVLY 177 FGE R+TMR+T A Q S WYG DR Y Sbjct: 30 FGEGRITMRRTVKSAPQ----SIWYGEDRPKY 57
>CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 269 Score = 33.1 bits (74), Expect = 0.21 Identities = 16/27 (59%), Positives = 20/27 (74%) Frame = +1 Query: 88 EARVTMRKTAAKAKQVSSGSPWYGADR 168 EARVTMR+T +K+ S + WYGADR Sbjct: 33 EARVTMRRTVSKS--AGSDTIWYGADR 57
>CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloroplast precursor| (LHCII type II CAB-215) (LHCP) Length = 265 Score = 32.0 bits (71), Expect = 0.47 Identities = 16/32 (50%), Positives = 19/32 (59%) Frame = +1 Query: 82 FGEARVTMRKTAAKAKQVSSGSPWYGADRVLY 177 FG+AR TMR+T A + S WYG DR Y Sbjct: 30 FGQARFTMRRTVKSAPE----SIWYGPDRPKY 57
>CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloroplast precursor| (LHCII type I CAB-37) (LHCP) Length = 265 Score = 30.4 bits (67), Expect = 1.4 Identities = 16/32 (50%), Positives = 17/32 (53%) Frame = +1 Query: 82 FGEARVTMRKTAAKAKQVSSGSPWYGADRVLY 177 FG R TMR+T A Q S WYG DR Y Sbjct: 30 FGGGRATMRRTVKSAPQ----SIWYGEDRPKY 57
>CB2C_LYCES (P14275) Chlorophyll a-b binding protein 1C, chloroplast precursor| (LHCII type I CAB-1C) (LHCP) (Fragments) Length = 265 Score = 30.0 bits (66), Expect = 1.8 Identities = 17/37 (45%), Positives = 24/37 (64%), Gaps = 1/37 (2%) Frame = +1 Query: 46 GKSVK-NVASSALFGEARVTMRKTAAKAKQVSSGSPW 153 G++VK + ++S + G R+TMRK A AK S SPW Sbjct: 15 GQAVKLSPSASEISGNGRITMRK--AVAKSAPSSSPW 49
>CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloroplast precursor| (LHCII type I CAB-5) (LHCP) (Fragment) Length = 237 Score = 28.9 bits (63), Expect = 4.0 Identities = 16/32 (50%), Positives = 17/32 (53%) Frame = +1 Query: 82 FGEARVTMRKTAAKAKQVSSGSPWYGADRVLY 177 F RVTMR+T A Q S WYG DR Y Sbjct: 2 FEGGRVTMRRTVKSAPQ----SIWYGEDRPKY 29
>CB2A_LYCES (P14274) Chlorophyll a-b binding protein 1A, chloroplast precursor| (LHCII type I CAB-1A) (LHCP) (Fragments) Length = 265 Score = 28.1 bits (61), Expect = 6.8 Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 1/37 (2%) Frame = +1 Query: 46 GKSVK-NVASSALFGEARVTMRKTAAKAKQVSSGSPW 153 G++VK + ++S G R+TMRK A AK S SPW Sbjct: 15 GQAVKLSPSASENSGNGRITMRK--AVAKSAPSSSPW 49
>CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloroplast precursor| (LHCII type I CAB-36) (LHCP) Length = 265 Score = 28.1 bits (61), Expect = 6.8 Identities = 15/32 (46%), Positives = 16/32 (50%) Frame = +1 Query: 82 FGEARVTMRKTAAKAKQVSSGSPWYGADRVLY 177 F R TMR+T A Q S WYG DR Y Sbjct: 30 FNGGRATMRRTVKSAPQ----SIWYGEDRPKY 57
>ZN469_HUMAN (Q96JG9) Zinc finger protein 469 (Fragment)| Length = 2469 Score = 27.7 bits (60), Expect = 8.8 Identities = 12/19 (63%), Positives = 12/19 (63%) Frame = +2 Query: 107 GRPLQRPSKFHRAAHGTEP 163 GRPL RP K A HG EP Sbjct: 2414 GRPLLRPPKRGTAVHGAEP 2432 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.311 0.122 0.340 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 23,518,643 Number of Sequences: 219361 Number of extensions: 327333 Number of successful extensions: 875 Number of sequences better than 10.0: 48 Number of HSP's better than 10.0 without gapping: 857 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 861 length of database: 80,573,946 effective HSP length: 34 effective length of database: 73,115,672 effective search space used: 1754776128 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits)
