>ref|XM_475514.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1845

 Score =  137 bits (69), Expect = 5e-29
 Identities = 135/157 (85%)
 Strand = Plus / Plus

                                                                        
Query: 143  tttcacctagcagctctgtggacagcatgtgctctgtgatttctggggtttcaacagcat 202
            |||| |||||||| |||||||||||| || | |||||| ||||||||| ||||||||| |
Sbjct: 1169 tttcgcctagcagttctgtggacagcttgagttctgtggtttctggggcttcaacagctt 1228

                                                                        
Query: 203  ccactgtagggagagcgagtcatacatctgagacctttagtacaaggtcatcttcattgt 262
            ||||||||||||    ||| ||||||||||||| ||| |||||| |||| |||||||| |
Sbjct: 1229 ccactgtagggaagatgagccatacatctgagagcttcagtacacggtcttcttcattat 1288

                                                 
Query: 263  ccccttccaccagaaagagcaatgaccaccctccaac 299
            ||||||||  |||||| |||||||||||| |||||||
Sbjct: 1289 ccccttccctcagaaatagcaatgaccacgctccaac 1325

>gb|AC093088.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1001_G01,
             complete sequence
          Length = 122768

 Score =  137 bits (69), Expect = 5e-29
 Identities = 135/157 (85%)
 Strand = Plus / Plus

                                                                         
Query: 143   tttcacctagcagctctgtggacagcatgtgctctgtgatttctggggtttcaacagcat 202
             |||| |||||||| |||||||||||| || | |||||| ||||||||| ||||||||| |
Sbjct: 93374 tttcgcctagcagttctgtggacagcttgagttctgtggtttctggggcttcaacagctt 93433

                                                                         
Query: 203   ccactgtagggagagcgagtcatacatctgagacctttagtacaaggtcatcttcattgt 262
             ||||||||||||    ||| ||||||||||||| ||| |||||| |||| |||||||| |
Sbjct: 93434 ccactgtagggaagatgagccatacatctgagagcttcagtacacggtcttcttcattat 93493

                                                  
Query: 263   ccccttccaccagaaagagcaatgaccaccctccaac 299
             ||||||||  |||||| |||||||||||| |||||||
Sbjct: 93494 ccccttccctcagaaatagcaatgaccacgctccaac 93530

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score =  137 bits (69), Expect = 5e-29
 Identities = 135/157 (85%)
 Strand = Plus / Plus

                                                                           
Query: 143     tttcacctagcagctctgtggacagcatgtgctctgtgatttctggggtttcaacagcat 202
               |||| |||||||| |||||||||||| || | |||||| ||||||||| ||||||||| |
Sbjct: 1137763 tttcgcctagcagttctgtggacagcttgagttctgtggtttctggggcttcaacagctt 1137822

                                                                           
Query: 203     ccactgtagggagagcgagtcatacatctgagacctttagtacaaggtcatcttcattgt 262
               ||||||||||||    ||| ||||||||||||| ||| |||||| |||| |||||||| |
Sbjct: 1137823 ccactgtagggaagatgagccatacatctgagagcttcagtacacggtcttcttcattat 1137882

                                                    
Query: 263     ccccttccaccagaaagagcaatgaccaccctccaac 299
               ||||||||  |||||| |||||||||||| |||||||
Sbjct: 1137883 ccccttccctcagaaatagcaatgaccacgctccaac 1137919

>dbj|AK101222.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033031D02, full
            insert sequence
          Length = 2241

 Score =  137 bits (69), Expect = 5e-29
 Identities = 135/157 (85%)
 Strand = Plus / Plus

                                                                        
Query: 143  tttcacctagcagctctgtggacagcatgtgctctgtgatttctggggtttcaacagcat 202
            |||| |||||||| |||||||||||| || | |||||| ||||||||| ||||||||| |
Sbjct: 1303 tttcgcctagcagttctgtggacagcttgagttctgtggtttctggggcttcaacagctt 1362

                                                                        
Query: 203  ccactgtagggagagcgagtcatacatctgagacctttagtacaaggtcatcttcattgt 262
            ||||||||||||    ||| ||||||||||||| ||| |||||| |||| |||||||| |
Sbjct: 1363 ccactgtagggaagatgagccatacatctgagagcttcagtacacggtcttcttcattat 1422

                                                 
Query: 263  ccccttccaccagaaagagcaatgaccaccctccaac 299
            ||||||||  |||||| |||||||||||| |||||||
Sbjct: 1423 ccccttccctcagaaatagcaatgaccacgctccaac 1459

>emb|CR626942.6| Zebrafish DNA sequence from clone DKEY-189F18 in linkage group 17,
             complete sequence
          Length = 113259

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 161   tggacagcatgtgctctgtgat 182
             ||||||||||||||||||||||
Sbjct: 64958 tggacagcatgtgctctgtgat 64979

>emb|AL845444.9| Zebrafish DNA sequence from clone DKEY-12F4 in linkage group 17, complete
              sequence
          Length = 200306

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 161    tggacagcatgtgctctgtgat 182
              ||||||||||||||||||||||
Sbjct: 128593 tggacagcatgtgctctgtgat 128614

>gb|AC150752.4| Bos taurus  BAC CH240-288E20 (Children's Hospital Oakland Research
             Institute Bovine BAC Library (male)) complete sequence
          Length = 165924

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 255   ttcattgtccccttccaccagaaag 279
             ||||||||||||||| |||||||||
Sbjct: 23372 ttcattgtccccttctaccagaaag 23348

>gb|L23648.1| Caenorhabditis elegans cosmid F44B9, complete sequence
          Length = 36327

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 339  ttcaagaacattttttgataa 359
            |||||||||||||||||||||
Sbjct: 3644 ttcaagaacattttttgataa 3664

>emb|AL357057.19| Human DNA sequence from clone RP11-802N13 on chromosome 6 Contains part
             of the CLIC5 gene for chloride intracellular channel 5,
             complete sequence
          Length = 58133

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 324   tgcagaaggacaggcttcaag 344
             |||||||||||||||||||||
Sbjct: 39465 tgcagaaggacaggcttcaag 39445

>gb|AC093574.3| Homo sapiens chromosome 3 clone RP11-178K11, complete sequence
          Length = 151993

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 395   atggttttaagccatctagtt 415
             |||||||||||||||||||||
Sbjct: 52199 atggttttaagccatctagtt 52219

>gb|AC012087.10|AC012087 Homo sapiens 3 BAC RP11-317L10,RP11-150K6,RP11-68D12 (Roswell Park
             Cancer Institute Human BAC Library) complete sequence
          Length = 194635

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 395   atggttttaagccatctagtt 415
             |||||||||||||||||||||
Sbjct: 38728 atggttttaagccatctagtt 38708

>emb|AL772314.9| Zebrafish DNA sequence from clone DKEY-89B17 in linkage group 19,
             complete sequence
          Length = 185640

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 533   agagctcttggattccatcta 553
             |||||||||||||||||||||
Sbjct: 29623 agagctcttggattccatcta 29643

>emb|CR974592.5| Mouse DNA sequence from clone RP23-56C15 on chromosome 12, complete
              sequence
          Length = 201549

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 340    tcaagaacattttttgataat 360
              |||||||||||||||||||||
Sbjct: 139088 tcaagaacattttttgataat 139068

>gb|AC104241.7| Homo sapiens chromosome 11, clone RP11-45A12, complete sequence
          Length = 147821

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 398   gttttaagccatctagttta 417
             ||||||||||||||||||||
Sbjct: 60649 gttttaagccatctagttta 60630

>gb|AC121097.6| Mus musculus chromosome 13, clone RP24-449F13, complete sequence
          Length = 217251

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 345    aacattttttgataatgtgaaatc 368
              ||||||||||| ||||||||||||
Sbjct: 163164 aacattttttgttaatgtgaaatc 163141

>emb|CR377220.10| Zebrafish DNA sequence from clone DKEY-279E10 in linkage group 1,
             complete sequence
          Length = 169012

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 165   cagcatgtgctctgtgattt 184
             ||||||||||||||||||||
Sbjct: 45983 cagcatgtgctctgtgattt 46002

>gb|AC115632.4| Mus musculus BAC clone RP24-136O10 from chromosome 13, complete sequence
          Length = 166481

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 345    aacattttttgataatgtgaaatc 368
              ||||||||||| ||||||||||||
Sbjct: 134107 aacattttttgttaatgtgaaatc 134130

>emb|CR714937.2|CNS0GELH Tetraodon nigroviridis full-length cDNA
          Length = 1009

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 453 cgagaaatctgttgaacaaa 472
           ||||||||||||||||||||
Sbjct: 167 cgagaaatctgttgaacaaa 186

>gb|AC162282.6| Mus musculus chromosome 8, clone RP23-154H18, complete sequence
          Length = 217566

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 444   ttttgatgccgagaaatctg 463
             ||||||||||||||||||||
Sbjct: 63722 ttttgatgccgagaaatctg 63703

>emb|AL691523.6| Human DNA sequence from clone RP13-531C17 on chromosome 1 Contains the
             5' end of the gene for glycine- glutamate-
             thienylcyclohexylpiperidine-binding protein (KIAA0562),
             the DFFB gene for DNA fragmentation factor 40kDa beta
             polypeptide (caspase-activated DNase), the 3' end of the
             gene for a novel protein and three CpG islands, complete
             sequence
          Length = 69982

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 398   gttttaagccatctagttta 417
             ||||||||||||||||||||
Sbjct: 23675 gttttaagccatctagttta 23694

>emb|AL162414.11| Human DNA sequence from clone RP11-202G18 on chromosome 9 Contains a
             novel gene, complete sequence
          Length = 176689

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 101   atcaaagaaataagattcac 120
             ||||||||||||||||||||
Sbjct: 29243 atcaaagaaataagattcac 29262

>gb|AC107743.14| Mus musculus chromosome 1, clone RP23-326A12, complete sequence
          Length = 221645

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 569   ctgcatctcttacatttgagcaag 592
             |||||||||||| |||||||||||
Sbjct: 59428 ctgcatctcttatatttgagcaag 59451

>emb|AL031407.3|HS436K10 Human DNA sequence from clone RP3-436K10 on chromosome 6p22.1-23,
            complete sequence
          Length = 165139

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 398  gttttaagccatctagttta 417
            ||||||||||||||||||||
Sbjct: 5746 gttttaagccatctagttta 5765

>gb|AC010186.6| Homo sapiens 12p12-21.3-21.8 BAC RP11-705C15 (Roswell Park Cancer
             Institute Human BAC Library) complete sequence
          Length = 74801

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 457   aaatctgttgaacaaaaagc 476
             ||||||||||||||||||||
Sbjct: 25033 aaatctgttgaacaaaaagc 25014

>gb|AC102625.8| Mus musculus chromosome 8, clone RP23-453E3, complete sequence
          Length = 167288

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 444   ttttgatgccgagaaatctg 463
             ||||||||||||||||||||
Sbjct: 58777 ttttgatgccgagaaatctg 58796

>gb|CP000016.1| Candidatus Blochmannia pennsylvanicus str. BPEN, complete genome
          Length = 791654

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 348    attttttgataatgtgaaat 367
              ||||||||||||||||||||
Sbjct: 161062 attttttgataatgtgaaat 161081


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,481,866
Number of Sequences: 3902068
Number of extensions: 5481866
Number of successful extensions: 99713
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 99634
Number of HSP's gapped (non-prelim): 75
length of query: 592
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 569
effective length of database: 17,143,297,704
effective search space: 9754536393576
effective search space used: 9754536393576
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)