| Clone Name | bags12g20 |
|---|---|
| Clone Library Name | barley_pub |
>GSR2_ARATH (O22892) Protein At2g40430| Length = 442 Score = 103 bits (258), Expect = 3e-22 Identities = 56/144 (38%), Positives = 81/144 (56%) Frame = +1 Query: 19 VLKRNPYIQPIPSSLMSXXXXXXXXXXXXXXQLQESREEKSVPMEEDSTETNLDIWGGDA 198 +LK+NP++Q +PSS E + K V D+WG D+ Sbjct: 77 ILKKNPFVQLVPSSKPKLKKSKKTIVI-------EDKAPKQVQKSVGDDSVMADLWGDDS 129 Query: 199 KGAALPKKGMKRLNKNRSTTSVIPAVEVEPQGCSFNPPHEAHQDALALAVADEMRKIYTK 378 KG + +++ KN S+I AVE+E GCS+NP E+HQD LA AVA EM+K+Y Sbjct: 130 KGEH--ESNPRKIFKN---PSIISAVEIEHPGCSYNPTTESHQDMLAEAVAQEMQKVYKT 184 Query: 379 ELGPTPVPLTVLGQAVAEEDKFFL 450 ELGP PVPLT+ G ++E++++FL Sbjct: 185 ELGPAPVPLTIEGDTLSEDERYFL 208
>GSCR2_HUMAN (Q9NZM5) Glioma tumor suppressor candidate region gene 2 protein| (p60) Length = 478 Score = 46.6 bits (109), Expect = 5e-05 Identities = 28/76 (36%), Positives = 38/76 (50%) Frame = +1 Query: 217 KKGMKRLNKNRSTTSVIPAVEVEPQGCSFNPPHEAHQDALALAVADEMRKIYTKELGPTP 396 KKG+KR + + S PAVEV P G S+NP E HQ L+ A E+++ E Sbjct: 219 KKGVKRPARLHTKPSQAPAVEVAPAGASYNPSFEDHQTLLSAAHEVELQRQKEAEKLERQ 278 Query: 397 VPLTVLGQAVAEEDKF 444 + L QA +E F Sbjct: 279 LALPATEQAATQESTF 294
>GSCR2_CAEEL (Q9NEU5) Hypothetical protein Y39B6A.33 in chromosome V| Length = 438 Score = 33.5 bits (75), Expect = 0.42 Identities = 14/41 (34%), Positives = 25/41 (60%) Frame = +1 Query: 247 RSTTSVIPAVEVEPQGCSFNPPHEAHQDALALAVADEMRKI 369 +S TS++PAV++ G S+NP +Q+ +A +E + I Sbjct: 173 KSITSLLPAVQIAEGGASYNPESAEYQEYVAKIAGEEQKLI 213
>CH60_BIFAN (Q93M78) 60 kDa chaperonin (Protein Cpn60) (groEL protein) (Heat| shock protein 60) Length = 537 Score = 32.0 bits (71), Expect = 1.2 Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 6/75 (8%) Frame = +1 Query: 157 DSTETNLDIWGGDAKGAALPKKGM----KRLNKNRSTTS--VIPAVEVEPQGCSFNPPHE 318 + E + ++ G +A GAA+ G+ K++ +N + VI V P+G FN + Sbjct: 422 EKVEKDFNLEGDEATGAAIVFSGIEAPIKQIAENAGLSGAVVIDKVRSLPEGEGFNAATD 481 Query: 319 AHQDALALAVADEMR 363 ++D +A V D ++ Sbjct: 482 TYEDLMAAGVTDPVK 496
>EP300_HUMAN (Q09472) E1A-associated protein p300 (EC 2.3.1.48)| Length = 2414 Score = 31.2 bits (69), Expect = 2.1 Identities = 17/50 (34%), Positives = 31/50 (62%) Frame = +1 Query: 112 QLQESREEKSVPMEEDSTETNLDIWGGDAKGAALPKKGMKRLNKNRSTTS 261 +L++ EE+ EE+++ + D+ GD+K A KK K+ +KN+S+ S Sbjct: 1519 ELEQEEEERK--REENTSNESTDVTKGDSKNA--KKKNNKKTSKNKSSLS 1564
>CH60_BIFLO (Q8G879) 60 kDa chaperonin (Protein Cpn60) (groEL protein)| Length = 541 Score = 30.8 bits (68), Expect = 2.7 Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 6/75 (8%) Frame = +1 Query: 157 DSTETNLDIWGGDAKGAALPKKGM----KRLNKNRSTTS--VIPAVEVEPQGCSFNPPHE 318 + TE + G +A GAA+ + + K++ +N + VI V P G FN + Sbjct: 425 EKTEAVTSLTGEEATGAAIVFRAIEAPIKQIAENAGVSGDVVINTVRSLPDGEGFNAATD 484 Query: 319 AHQDALALAVADEMR 363 ++D LA V D ++ Sbjct: 485 TYEDLLAAGVTDPVK 499
>SYL_CHLTE (Q8KBY2) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)| (LeuRS) Length = 807 Score = 30.0 bits (66), Expect = 4.6 Identities = 16/45 (35%), Positives = 28/45 (62%) Frame = -2 Query: 190 HPRCRGSSQLNPLPWEHFFLPVTPAVAFSLRAS*TSSCPSLTSKK 56 + RC+G + L+P+ W+ F L PA F+++ T + P LT++K Sbjct: 64 YKRCQGHNVLHPMGWDAFGL---PAEQFAIK---TGTHPRLTTEK 102
>MDTO_ECOLI (P32715) Multidrug resistance protein mdtO| Length = 683 Score = 29.6 bits (65), Expect = 6.0 Identities = 14/39 (35%), Positives = 21/39 (53%) Frame = -3 Query: 279 FNRRNHRCGRPIFIKPFHSLFGQSSPFSISTPDVEVRLS 163 F R HR G F +++GQ+ P + P+V VRL+ Sbjct: 118 FLMRTHRLGLVFFAVAIVAIYGQTFPAMLDYPEVVVRLT 156
>MDTO_ECO57 (Q8X5R8) Multidrug resistance protein mdtO| Length = 683 Score = 29.6 bits (65), Expect = 6.0 Identities = 14/39 (35%), Positives = 21/39 (53%) Frame = -3 Query: 279 FNRRNHRCGRPIFIKPFHSLFGQSSPFSISTPDVEVRLS 163 F R HR G F +++GQ+ P + P+V VRL+ Sbjct: 118 FLMRTHRLGLVFFAVAIVAIYGQTFPAMLDYPEVVVRLT 156 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.311 0.129 0.362 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 59,876,063 Number of Sequences: 219361 Number of extensions: 1006661 Number of successful extensions: 2145 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 2100 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2143 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4545742239 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.8 bits)