ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags12g20
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC104283.2| Oryza sativa (japonica cultivar-group) chromosome... 100 9e-18
2dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 100 9e-18
3gb|AY108180.1| Zea mays PCO134590 mRNA sequence 88 4e-14
4gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome 44 0.48
5ref|XM_544109.2| PREDICTED: Canis familiaris similar to valosin ... 44 0.48
6gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome 44 0.48
7gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome 42 1.9
8ref|NM_025054.3| Homo sapiens valosin containing protein (p97)/p... 42 1.9
9gb|AC107823.11| Mus musculus chromosome 8, clone RP23-184K1, com... 42 1.9
10gb|AC007928.7| Drosophila melanogaster clone BACR04O02, complete... 42 1.9
11ref|XM_865738.1| PREDICTED: Bos taurus similar to valosin contai... 42 1.9
12ref|XM_588521.2| PREDICTED: Bos taurus similar to valosin contai... 42 1.9
13gb|BC003902.1| Mus musculus membrane interacting protein of RGS1... 42 1.9
14gb|CP000233.1| Lactobacillus salivarius subsp. salivarius UCC118... 42 1.9
15gb|AC145807.2| Xenopus tropicalis clone CH216-9P15, complete seq... 42 1.9
16gb|AC107798.10| Mus musculus chromosome 8, clone RP23-4D24, comp... 42 1.9
17ref|XM_805219.1| Trypanosoma cruzi strain CL Brener ATP-dependen... 42 1.9
18ref|XM_804142.1| Trypanosoma cruzi strain CL Brener pre-mRNA spl... 42 1.9
19gb|AC090154.19| Homo sapiens chromosome 8, clone RP11-705C3, com... 42 1.9
20ref|XM_776166.1| PREDICTED: Strongylocentrotus purpuratus simila... 42 1.9
21gb|AC132807.3| Homo sapiens chromosome 3 clone RP11-147G2, compl... 42 1.9
22ref|XM_786004.1| PREDICTED: Strongylocentrotus purpuratus simila... 42 1.9
23ref|XM_778916.1| PREDICTED: Strongylocentrotus purpuratus simila... 42 1.9
24gb|AC165086.4| Mus musculus BAC clone RP23-209B2 from chromosome... 42 1.9
25emb|CR936659.1| Homo sapiens mRNA; cDNA DKFZp686G038 (from clone... 42 1.9
26emb|AL834476.1|HSM805579 Homo sapiens mRNA; cDNA DKFZp762E2011 (... 42 1.9
27emb|AL832606.2|HSM803916 Homo sapiens mRNA; cDNA DKFZp451F1917 (... 42 1.9
28gb|AC104297.1| Homo sapiens chromosome 3 clone RP11-8D23, comple... 42 1.9
29dbj|AK150807.1| Mus musculus bone marrow macrophage cDNA, RIKEN ... 42 1.9
30dbj|AK005361.1| Mus musculus adult male cerebellum cDNA, RIKEN f... 42 1.9
31ref|NM_001026098.2| Caenorhabditis elegans UNCoordinated family ... 42 1.9
32ref|NM_001026095.2| Caenorhabditis elegans UNCoordinated family ... 42 1.9
33ref|NM_171907.3| Caenorhabditis elegans UNCoordinated family mem... 42 1.9
34ref|NM_068497.3| Caenorhabditis elegans UNCoordinated family mem... 42 1.9
35ref|NM_001026097.2| Caenorhabditis elegans UNCoordinated family ... 42 1.9
36dbj|AK004583.1| Mus musculus adult male lung cDNA, RIKEN full-le... 42 1.9
37dbj|AP006878.1| Thermococcus kodakarensis KOD1 DNA, complete genome 42 1.9
38gb|AF212860.1|AF212860 Mus musculus membrane interacting protein... 42 1.9
39gb|BC012498.1| Homo sapiens valosin containing protein (p97)/p47... 42 1.9
40gb|AE003705.3| Drosophila melanogaster chromosome 3R, section 43... 42 1.9
41ref|NM_019580.3| Mus musculus membrane interacting protein of RG... 42 1.9
42gb|BC094799.1| Homo sapiens valosin containing protein (p97)/p47... 42 1.9
43gb|AC152412.2| Mus musculus BAC clone RP23-383B18 from 7, comple... 42 1.9
44emb|X97283.1|GCINTALPH G.cydonium mRNA for integrin alpha subunit 42 1.9
45dbj|AB058753.1| Homo sapiens mRNA for KIAA1850 protein, partial cds 42 1.9
46gb|AE017344.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 7.5
47gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 7.5
48ref|XM_415137.1| PREDICTED: Gallus gallus similar to F-box and l... 40 7.5
49ref|XM_959425.1| Neurospora crassa OR74A hypothetical protein (N... 40 7.5
50ref|XM_329348.1| Neurospora crassa OR74A hypothetical protein (N... 40 7.5
51gb|AY176327.1| Staphylococcus phage K, complete genome 40 7.5
52ref|XM_389032.1| Gibberella zeae PH-1 chromosome 2 hypothetical ... 40 7.5
53ref|XM_566789.1| Cryptococcus neoformans var. neoformans JEC21 h... 40 7.5
54ref|XM_812428.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 7.5
55gb|AC023684.4| Drosophila melanogaster X BAC RP98-7P13 (Roswell ... 40 7.5
56gb|BC055234.1| Danio rerio AE binding protein 2, mRNA (cDNA clon... 40 7.5
57ref|NM_213494.1| Danio rerio AE binding protein 2 (aebp2), mRNA 40 7.5
58gb|AC104604.7| Drosophila melanogaster X BAC RP98-18K5 (Roswell ... 40 7.5
59ref|NM_131995.1| Drosophila melanogaster CG15784-RA (CG15784), mRNA 40 7.5
60ref|XM_697583.1| PREDICTED: Danio rerio hypothetical protein LOC... 40 7.5
61emb|BX511060.7| Zebrafish DNA sequence from clone CH211-210L19 i... 40 7.5
62emb|CR391251.1| Gallus gallus finished cDNA, clone ChEST700c1 40 7.5
63gb|AC095046.3| Homo sapiens BAC clone RP11-147K21 from 4, comple... 40 7.5
64gb|AY954969.1| Bacteriophage G1, complete genome 40 7.5
65emb|BX897690.13| Zebrafish DNA sequence from clone CH211-197O9 i... 40 7.5
66gb|AF100360.1|AF100360 Influenza B virus B/Aichi/5/88 segment 5 ... 40 7.5
67gb|AE003434.4| Drosophila melanogaster chromosome X, section 18 ... 40 7.5
68emb|AL928889.14| Mouse DNA sequence from clone RP23-271L22 on ch... 40 7.5
69gb|AF005739.1|AF005739 Influenza B virus B/Panama/45/90 nucleopr... 40 7.5 
>gb|AC104283.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1607_F09,
             complete sequence
          Length = 95755

 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 92/106 (86%)
 Strand = Plus / Minus

                                                                         
Query: 332   ctcttgctctagccgttgctgatgaaatgcgcaagatctacacgaaagagttaggcccca 391
             ||||||||| ||| ||||||||||| ||||| || |||||||||||||||||||| ||||
Sbjct: 51088 ctcttgctcaagctgttgctgatgagatgcgtaaaatctacacgaaagagttagggccca 51029

                                                           
Query: 392   caccagtgccacttactgttcttggtcaagcagtagctgaagaaga 437
              ||| |||||||||| ||||| |||| ||||| |  ||||||||||
Sbjct: 51028 aacctgtgccacttattgttcctggtgaagcaatcactgaagaaga 50983



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 57/62 (91%)
 Strand = Plus / Minus

                                                                         
Query: 247   aggtctaccacatctgtgattcctgcggttgaagttgagcctcaaggatgttcatttaat 306
             ||||||||| |||||||||||||||| |||||||||||| | | ||||||||||||||||
Sbjct: 51296 aggtctaccgcatctgtgattcctgctgttgaagttgaggccccaggatgttcatttaat 51237

               
Query: 307   cc 308
             ||
Sbjct: 51236 cc 51235



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 56/67 (83%)
 Strand = Plus / Minus

                                                                         
Query: 22    ttgaagcggaacccttatatacagccaattccatcttctttgatgtcaaagaaggacaag 81
             ||||||||||| || ||| |||| ||| | || |||||||| | | |||||||||| |||
Sbjct: 51769 ttgaagcggaatccatatgtacaaccagtcccgtcttctttaacgacaaagaaggataag 51710

                    
Query: 82    aagaagt 88
             |||||||
Sbjct: 51709 aagaagt 51703
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 92/106 (86%)
 Strand = Plus / Minus

                                                                           
Query: 332     ctcttgctctagccgttgctgatgaaatgcgcaagatctacacgaaagagttaggcccca 391
               ||||||||| ||| ||||||||||| ||||| || |||||||||||||||||||| ||||
Sbjct: 2484066 ctcttgctcaagctgttgctgatgagatgcgtaaaatctacacgaaagagttagggccca 2484007

                                                             
Query: 392     caccagtgccacttactgttcttggtcaagcagtagctgaagaaga 437
                ||| |||||||||| ||||| |||| ||||| |  ||||||||||
Sbjct: 2484006 aacctgtgccacttattgttcctggtgaagcaatcactgaagaaga 2483961



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 57/62 (91%)
 Strand = Plus / Minus

                                                                           
Query: 247     aggtctaccacatctgtgattcctgcggttgaagttgagcctcaaggatgttcatttaat 306
               ||||||||| |||||||||||||||| |||||||||||| | | ||||||||||||||||
Sbjct: 2484274 aggtctaccgcatctgtgattcctgctgttgaagttgaggccccaggatgttcatttaat 2484215

                 
Query: 307     cc 308
               ||
Sbjct: 2484214 cc 2484213



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 56/67 (83%)
 Strand = Plus / Minus

                                                                           
Query: 22      ttgaagcggaacccttatatacagccaattccatcttctttgatgtcaaagaaggacaag 81
               ||||||||||| || ||| |||| ||| | || |||||||| | | |||||||||| |||
Sbjct: 2484747 ttgaagcggaatccatatgtacaaccagtcccgtcttctttaacgacaaagaaggataag 2484688

                      
Query: 82      aagaagt 88
               |||||||
Sbjct: 2484687 aagaagt 2484681
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>gb|AY108180.1| Zea mays PCO134590 mRNA sequence
          Length = 1538

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 149/184 (80%)
 Strand = Plus / Plus

                                                                       
Query: 265 attcctgcggttgaagttgagcctcaaggatgttcatttaatcctccacatgaagcccat 324
           |||||||| |||||||||||||||  |||||||||||||||||| |||   ||||| |||
Sbjct: 635 attcctgctgttgaagttgagcctgcaggatgttcatttaatcccccattcgaagcgcat 694

                                                                       
Query: 325 caagatgctcttgctctagccgttgctgatgaaatgcgcaagatctacacgaaagagtta 384
           |||||| ||||||||| ||| || || |||||||  |||||    |||| ||||||| | 
Sbjct: 695 caagattctcttgctcaagctgtagcagatgaaaaacgcaaagagtacatgaaagagctg 754

                                                                       
Query: 385 ggccccacaccagtgccacttactgttcttggtcaagcagtagctgaagaagacaaattt 444
           || || ||||| || ||||| |  |||| |||| ||||  |||| |||||||| ||||||
Sbjct: 755 gggccaacacctgtaccactcatagttcctggtgaagctatagccgaagaagataaattt 814

               
Query: 445 tttc 448
           ||||
Sbjct: 815 tttc 818



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 44/52 (84%)
 Strand = Plus / Plus

                                                               
Query: 102 aaagaaaaagcaactgcaggagtcacgggaagaaaaaagtgttcccatggaa 153
           |||||| ||| || |||||||| ||| || ||| ||||||||||| ||||||
Sbjct: 497 aaagaagaagaaattgcaggagacacagggagagaaaagtgttcctatggaa 548
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>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                         
Query: 70      aagaaggacaagaagaagttcaagaagcacgcaaagaaaaag 111
               |||||||||||||||||   ||||||| | ||||||||||||
Sbjct: 2461900 aagaaggacaagaagaaagacaagaagaaggcaaagaaaaag 2461859
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>ref|XM_544109.2| PREDICTED: Canis familiaris similar to valosin containing protein
            (p97)/p47 complex interacting protein 1 (LOC486980), mRNA
          Length = 5229

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 198  taaaggggctgctttgcccaaa 219
            ||||||||||||||||||||||
Sbjct: 1368 taaaggggctgctttgcccaaa 1389
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>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome
          Length = 7215267

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 87      gttcaagaagcacgcaaagaaa 108
               ||||||||||||||||||||||
Sbjct: 2055659 gttcaagaagcacgcaaagaaa 2055638
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>gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome
          Length = 2364842

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 505     ggcgatggagaccaggatgctgact 529
               |||||||||||||||||||| ||||
Sbjct: 1361582 ggcgatggagaccaggatgccgact 1361558
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>ref|NM_025054.3| Homo sapiens valosin containing protein (p97)/p47 complex interacting
            protein 1 (VCPIP1), mRNA
          Length = 8192

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 199  aaaggggctgctttgcccaaa 219
            |||||||||||||||||||||
Sbjct: 1343 aaaggggctgctttgcccaaa 1363
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>gb|AC107823.11| Mus musculus chromosome 8, clone RP23-184K1, complete sequence
          Length = 190966

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 238  aataaaaataggtctaccaca 258
            |||||||||||||||||||||
Sbjct: 7165 aataaaaataggtctaccaca 7145
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>gb|AC007928.7| Drosophila melanogaster clone BACR04O02, complete sequence
          Length = 176395

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 345   cgttgctgatgaaatgcgcaa 365
             |||||||||||||||||||||
Sbjct: 66330 cgttgctgatgaaatgcgcaa 66350
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>ref|XM_865738.1| PREDICTED: Bos taurus similar to valosin containing protein (p97)/p47
            complex interacting protein 1, transcript variant 2
            (LOC539643), mRNA
          Length = 5552

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 199  aaaggggctgctttgcccaaa 219
            |||||||||||||||||||||
Sbjct: 1340 aaaggggctgctttgcccaaa 1360
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>ref|XM_588521.2| PREDICTED: Bos taurus similar to valosin containing protein (p97)/p47
            complex interacting protein 1, transcript variant 1
            (LOC539643), mRNA
          Length = 5416

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 199  aaaggggctgctttgcccaaa 219
            |||||||||||||||||||||
Sbjct: 1320 aaaggggctgctttgcccaaa 1340
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>gb|BC003902.1| Mus musculus membrane interacting protein of RGS16, mRNA (cDNA
           clone MGC:6768 IMAGE:3601420), complete cds
          Length = 1520

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 52  ccatcttctttgatgtcaaag 72
           |||||||||||||||||||||
Sbjct: 556 ccatcttctttgatgtcaaag 576
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>gb|CP000233.1| Lactobacillus salivarius subsp. salivarius UCC118, complete genome
          Length = 1827111

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 69     aaagaaggacaagaagaagtt 89
              |||||||||||||||||||||
Sbjct: 924820 aaagaaggacaagaagaagtt 924800
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>gb|AC145807.2| Xenopus tropicalis clone CH216-9P15, complete sequence
          Length = 225808

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 216    caaaaagggaatgaaaaggct 236
              |||||||||||||||||||||
Sbjct: 154327 caaaaagggaatgaaaaggct 154347
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>gb|AC107798.10| Mus musculus chromosome 8, clone RP23-4D24, complete sequence
          Length = 234420

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 238    aataaaaataggtctaccaca 258
              |||||||||||||||||||||
Sbjct: 215472 aataaaaataggtctaccaca 215452
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>ref|XM_805219.1| Trypanosoma cruzi strain CL Brener ATP-dependent RNA helicase
           (Tc00.1047053511731.50) partial mRNA
          Length = 2934

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 77  acaagaagaagttcaagaagc 97
           |||||||||||||||||||||
Sbjct: 399 acaagaagaagttcaagaagc 419
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>ref|XM_804142.1| Trypanosoma cruzi strain CL Brener pre-mRNA splicing factor
           ATP-dependent RNA helicase (Tc00.1047053506831.79)
           partial mRNA
          Length = 1225

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 77  acaagaagaagttcaagaagc 97
           |||||||||||||||||||||
Sbjct: 378 acaagaagaagttcaagaagc 398
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>gb|AC090154.19| Homo sapiens chromosome 8, clone RP11-705C3, complete sequence
          Length = 144615

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 199   aaaggggctgctttgcccaaa 219
             |||||||||||||||||||||
Sbjct: 47389 aaaggggctgctttgcccaaa 47369
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>ref|XM_776166.1| PREDICTED: Strongylocentrotus purpuratus similar to arginyl-tRNA
            synthetase (LOC575790), mRNA
          Length = 1998

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 74   aggacaagaagaagttcaaga 94
            |||||||||||||||||||||
Sbjct: 1355 aggacaagaagaagttcaaga 1375
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>gb|AC132807.3| Homo sapiens chromosome 3 clone RP11-147G2, complete sequence
          Length = 171678

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 50   ttccatcttctttgatgtcaa 70
            |||||||||||||||||||||
Sbjct: 6268 ttccatcttctttgatgtcaa 6288
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>ref|XM_786004.1| PREDICTED: Strongylocentrotus purpuratus similar to CG32527-PB,
           isoform B (LOC586213), mRNA
          Length = 1857

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 53  catcttctttgatgtcaaaga 73
           |||||||||||||||||||||
Sbjct: 511 catcttctttgatgtcaaaga 491
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>ref|XM_778916.1| PREDICTED: Strongylocentrotus purpuratus similar to CG5824-PA
            (LOC578764), mRNA
          Length = 2607

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 70   aagaaggacaagaagaagttcaaga 94
            |||||||| ||||||||||||||||
Sbjct: 1028 aagaaggagaagaagaagttcaaga 1052
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>gb|AC165086.4| Mus musculus BAC clone RP23-209B2 from chromosome 7, complete sequence
          Length = 195905

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 52     ccatcttctttgatgtcaaag 72
              |||||||||||||||||||||
Sbjct: 152548 ccatcttctttgatgtcaaag 152568
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>emb|CR936659.1| Homo sapiens mRNA; cDNA DKFZp686G038 (from clone DKFZp686G038)
          Length = 9990

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 199  aaaggggctgctttgcccaaa 219
            |||||||||||||||||||||
Sbjct: 1374 aaaggggctgctttgcccaaa 1394
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>emb|AL834476.1|HSM805579 Homo sapiens mRNA; cDNA DKFZp762E2011 (from clone DKFZp762E2011)
          Length = 3287

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 199 aaaggggctgctttgcccaaa 219
           |||||||||||||||||||||
Sbjct: 647 aaaggggctgctttgcccaaa 667
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>emb|AL832606.2|HSM803916 Homo sapiens mRNA; cDNA DKFZp451F1917 (from clone DKFZp451F1917)
          Length = 5135

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 199  aaaggggctgctttgcccaaa 219
            |||||||||||||||||||||
Sbjct: 1262 aaaggggctgctttgcccaaa 1282
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>gb|AC104297.1| Homo sapiens chromosome 3 clone RP11-8D23, complete sequence
          Length = 151504

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 50    ttccatcttctttgatgtcaa 70
             |||||||||||||||||||||
Sbjct: 67826 ttccatcttctttgatgtcaa 67806
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>dbj|AK150807.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length
           enriched library, clone:I830015K01 product:membrane
           interacting protein of RGS16, full insert sequence
          Length = 1549

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 52  ccatcttctttgatgtcaaag 72
           |||||||||||||||||||||
Sbjct: 619 ccatcttctttgatgtcaaag 639
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>dbj|AK005361.1| Mus musculus adult male cerebellum cDNA, RIKEN full-length enriched
           library, clone:1500035L01 product:membrane interacting
           protein of RGS16, full insert sequence
          Length = 1530

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 52  ccatcttctttgatgtcaaag 72
           |||||||||||||||||||||
Sbjct: 598 ccatcttctttgatgtcaaag 618
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>ref|NM_001026098.2| Caenorhabditis elegans UNCoordinated family member (unc-44) (unc-44)
            mRNA, complete cds
          Length = 3142

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 69   aaagaaggacaagaagaagtt 89
            |||||||||||||||||||||
Sbjct: 1724 aaagaaggacaagaagaagtt 1744
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>ref|NM_001026095.2| Caenorhabditis elegans UNCoordinated family member (unc-44) (unc-44)
            mRNA, complete cds
          Length = 6247

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 69   aaagaaggacaagaagaagtt 89
            |||||||||||||||||||||
Sbjct: 1724 aaagaaggacaagaagaagtt 1744
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>ref|NM_171907.3| Caenorhabditis elegans UNCoordinated family member (unc-44) (unc-44)
            mRNA, complete cds
          Length = 5653

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 69   aaagaaggacaagaagaagtt 89
            |||||||||||||||||||||
Sbjct: 1724 aaagaaggacaagaagaagtt 1744
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>ref|NM_068497.3| Caenorhabditis elegans UNCoordinated family member (unc-44) (unc-44)
            mRNA, complete cds
          Length = 5731

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 69   aaagaaggacaagaagaagtt 89
            |||||||||||||||||||||
Sbjct: 1724 aaagaaggacaagaagaagtt 1744
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>ref|NM_001026097.2| Caenorhabditis elegans UNCoordinated family member (unc-44) (unc-44)
            mRNA, complete cds
          Length = 21112

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 69   aaagaaggacaagaagaagtt 89
            |||||||||||||||||||||
Sbjct: 1724 aaagaaggacaagaagaagtt 1744
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>dbj|AK004583.1| Mus musculus adult male lung cDNA, RIKEN full-length enriched
           library, clone:1200003M13 product:membrane interacting
           protein of RGS16, full insert sequence
          Length = 1538

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 52  ccatcttctttgatgtcaaag 72
           |||||||||||||||||||||
Sbjct: 610 ccatcttctttgatgtcaaag 630
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>dbj|AP006878.1| Thermococcus kodakarensis KOD1 DNA, complete genome
          Length = 2088737

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 69     aaagaaggacaagaagaagttcaag 93
              ||||||||| |||||||||||||||
Sbjct: 153608 aaagaaggaaaagaagaagttcaag 153584
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>gb|AF212860.1|AF212860 Mus musculus membrane interacting protein of RGS16 (Mir16) mRNA,
           complete cds
          Length = 1065

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 52  ccatcttctttgatgtcaaag 72
           |||||||||||||||||||||
Sbjct: 578 ccatcttctttgatgtcaaag 598
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>gb|BC012498.1| Homo sapiens valosin containing protein (p97)/p47 complex interacting
            protein 1, mRNA (cDNA clone IMAGE:4510049), with apparent
            retained intron
          Length = 2443

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 199  aaaggggctgctttgcccaaa 219
            |||||||||||||||||||||
Sbjct: 1308 aaaggggctgctttgcccaaa 1328
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>gb|AE003705.3| Drosophila melanogaster chromosome 3R, section 43 of 118 of the
             complete sequence
          Length = 216741

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 345   cgttgctgatgaaatgcgcaa 365
             |||||||||||||||||||||
Sbjct: 18754 cgttgctgatgaaatgcgcaa 18734
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>ref|NM_019580.3| Mus musculus membrane interacting protein of RGS16 (Mir16), mRNA
          Length = 1530

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 52  ccatcttctttgatgtcaaag 72
           |||||||||||||||||||||
Sbjct: 598 ccatcttctttgatgtcaaag 618
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>gb|BC094799.1| Homo sapiens valosin containing protein (p97)/p47 complex interacting
            protein 1, mRNA (cDNA clone MGC:104761 IMAGE:4823131),
            complete cds
          Length = 3941

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 199  aaaggggctgctttgcccaaa 219
            |||||||||||||||||||||
Sbjct: 1270 aaaggggctgctttgcccaaa 1290
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>gb|AC152412.2| Mus musculus BAC clone RP23-383B18 from 7, complete sequence
          Length = 196399

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 52    ccatcttctttgatgtcaaag 72
             |||||||||||||||||||||
Sbjct: 45956 ccatcttctttgatgtcaaag 45976
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>emb|X97283.1|GCINTALPH G.cydonium mRNA for integrin alpha subunit
          Length = 3546

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 522  tgctgactctctaactggagagagg 546
            |||||||||||| ||||||||||||
Sbjct: 2242 tgctgactctctgactggagagagg 2266
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>dbj|AB058753.1| Homo sapiens mRNA for KIAA1850 protein, partial cds
          Length = 7189

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 199  aaaggggctgctttgcccaaa 219
            |||||||||||||||||||||
Sbjct: 1343 aaaggggctgctttgcccaaa 1363
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>gb|AE017344.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 4, complete
               sequence
          Length = 1783081

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 69      aaagaaggacaagaagaagt 88
               ||||||||||||||||||||
Sbjct: 1341552 aaagaaggacaagaagaagt 1341533
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>gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 1, complete
               sequence
          Length = 2300533

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 70      aagaaggacaagaagaagttcaag 93
               |||||||| |||||||||||||||
Sbjct: 1167915 aagaaggaaaagaagaagttcaag 1167892
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>ref|XM_415137.1| PREDICTED: Gallus gallus similar to F-box and leucine-rich repeat
            protein 10; protein containing CXXC domain 2 (LOC416844),
            mRNA
          Length = 6198

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 75   ggacaagaagaagttcaaga 94
            ||||||||||||||||||||
Sbjct: 4869 ggacaagaagaagttcaaga 4888
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>ref|XM_959425.1| Neurospora crassa OR74A hypothetical protein (NCU02159.1) partial
           mRNA
          Length = 1110

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 69  aaagaaggacaagaagaagttcaagaag 96
           |||||||||||||||||||  |||||||
Sbjct: 222 aaagaaggacaagaagaaggacaagaag 249
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>ref|XM_329348.1| Neurospora crassa OR74A hypothetical protein (NCU02159.1) partial
           mRNA
          Length = 1110

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 69  aaagaaggacaagaagaagttcaagaag 96
           |||||||||||||||||||  |||||||
Sbjct: 222 aaagaaggacaagaagaaggacaagaag 249
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>gb|AY176327.1| Staphylococcus phage K, complete genome
          Length = 127395

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 234   gcttaataaaaataggtcta 253
             ||||||||||||||||||||
Sbjct: 96556 gcttaataaaaataggtcta 96575
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>ref|XM_389032.1| Gibberella zeae PH-1 chromosome 2 hypothetical protein (FG08856.1)
           partial mRNA
          Length = 1050

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 68  caaagaaggacaagaagaag 87
           ||||||||||||||||||||
Sbjct: 401 caaagaaggacaagaagaag 420
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>ref|XM_566789.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein
            (CNA04350) partial mRNA
          Length = 1731

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 70   aagaaggacaagaagaagttcaag 93
            |||||||| |||||||||||||||
Sbjct: 1588 aagaaggaaaagaagaagttcaag 1611
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>ref|XM_812428.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053506265.150) partial mRNA
          Length = 471

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 67  tcaaagaaggacaagaagaa 86
           ||||||||||||||||||||
Sbjct: 289 tcaaagaaggacaagaagaa 308
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>gb|AC023684.4| Drosophila melanogaster X BAC RP98-7P13 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 178077

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 70     aagaaggacaagaagaagttcaagaagc 97
              ||||||||||||||||||  ||||||||
Sbjct: 158443 aagaaggacaagaagaaggccaagaagc 158416
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>gb|BC055234.1| Danio rerio AE binding protein 2, mRNA (cDNA clone MGC:63755
            IMAGE:2640498), complete cds
          Length = 1841

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 68   caaagaaggacaagaagaag 87
            ||||||||||||||||||||
Sbjct: 1312 caaagaaggacaagaagaag 1293
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>ref|NM_213494.1| Danio rerio AE binding protein 2 (aebp2), mRNA
          Length = 1841

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 68   caaagaaggacaagaagaag 87
            ||||||||||||||||||||
Sbjct: 1312 caaagaaggacaagaagaag 1293
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>gb|AC104604.7| Drosophila melanogaster X BAC RP98-18K5 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 167902

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 70    aagaaggacaagaagaagttcaagaagc 97
             ||||||||||||||||||  ||||||||
Sbjct: 65205 aagaaggacaagaagaaggccaagaagc 65178
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>ref|NM_131995.1| Drosophila melanogaster CG15784-RA (CG15784), mRNA
          Length = 1782

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 70  aagaaggacaagaagaagttcaagaagc 97
           ||||||||||||||||||  ||||||||
Sbjct: 304 aagaaggacaagaagaaggccaagaagc 331
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>ref|XM_697583.1| PREDICTED: Danio rerio hypothetical protein LOC554464 (LOC554464),
            mRNA
          Length = 1833

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 68   caaagaaggacaagaagaag 87
            ||||||||||||||||||||
Sbjct: 1312 caaagaaggacaagaagaag 1293
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>emb|BX511060.7| Zebrafish DNA sequence from clone CH211-210L19 in linkage group 10,
             complete sequence
          Length = 139250

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 210   tttgcccaaaaagggaatga 229
             ||||||||||||||||||||
Sbjct: 36503 tttgcccaaaaagggaatga 36484
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>emb|CR391251.1| Gallus gallus finished cDNA, clone ChEST700c1
          Length = 707

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 75  ggacaagaagaagttcaaga 94
           ||||||||||||||||||||
Sbjct: 680 ggacaagaagaagttcaaga 699
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>gb|AC095046.3| Homo sapiens BAC clone RP11-147K21 from 4, complete sequence
          Length = 156786

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 239    ataaaaataggtctaccaca 258
              ||||||||||||||||||||
Sbjct: 116921 ataaaaataggtctaccaca 116940
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>gb|AY954969.1| Bacteriophage G1, complete genome
          Length = 138715

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 234   gcttaataaaaataggtcta 253
             ||||||||||||||||||||
Sbjct: 61734 gcttaataaaaataggtcta 61753
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>emb|BX897690.13| Zebrafish DNA sequence from clone CH211-197O9 in linkage group 20,
             complete sequence
          Length = 128296

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 189   tggagatgctaaaggggctgcttt 212
             |||||||||||||| |||||||||
Sbjct: 11488 tggagatgctaaagtggctgcttt 11465
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>gb|AF100360.1|AF100360 Influenza B virus B/Aichi/5/88 segment 5 nucleoprotein (NP) gene,
           complete cds
          Length = 1761

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 63  gatgtcaaagaaggacaagaagaa 86
           ||||||||||||||| ||||||||
Sbjct: 409 gatgtcaaagaaggaaaagaagaa 432
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>gb|AE003434.4| Drosophila melanogaster chromosome X, section 18 of 74 of the complete
              sequence
          Length = 303928

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 70     aagaaggacaagaagaagttcaagaagc 97
              ||||||||||||||||||  ||||||||
Sbjct: 107767 aagaaggacaagaagaaggccaagaagc 107794
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>emb|AL928889.14| Mouse DNA sequence from clone RP23-271L22 on chromosome 2, complete
              sequence
          Length = 197191

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 131    aagaaaaaagtgttcccatg 150
              ||||||||||||||||||||
Sbjct: 180322 aagaaaaaagtgttcccatg 180341
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>gb|AF005739.1|AF005739 Influenza B virus B/Panama/45/90 nucleoprotein mRNA, complete cds
          Length = 1687

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 63  gatgtcaaagaaggacaagaagaa 86
           ||||||||||||||| ||||||||
Sbjct: 413 gatgtcaaagaaggaaaagaagaa 436


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,616,268
Number of Sequences: 3902068
Number of extensions: 5616268
Number of successful extensions: 115971
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 115699
Number of HSP's gapped (non-prelim): 269
length of query: 554
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 531
effective length of database: 17,143,297,704
effective search space: 9103091080824
effective search space used: 9103091080824
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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