ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags12g10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_550320.1| Oryza sativa (japonica cultivar-group), mRNA 605 e-170
2dbj|AK103230.1| Oryza sativa (japonica cultivar-group) cDNA clon... 605 e-170
3gb|AY105079.1| Zea mays PCO107820 mRNA sequence 355 9e-95
4dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 174 2e-40
5dbj|AP002523.1| Oryza sativa (japonica cultivar-group) genomic D... 174 2e-40
6gb|AC130811.22| Medicago truncatula clone mth2-26b4, complete se... 80 8e-12
7ref|NM_112954.2| Arabidopsis thaliana UBP14 (UBIQUITIN-SPECIFIC ... 78 3e-11
8gb|AY140096.1| Arabidopsis thaliana ubiquitin-specific protease ... 78 3e-11
9gb|AF302664.1|AF302664 Arabidopsis thaliana ubiquitin-specific p... 78 3e-11
10dbj|AP002034.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 76 1e-10
11gb|AC092100.5| Homo sapiens BAC clone RP11-666G4 from 7, complet... 44 0.44
12ref|XM_447083.1| Candida glabrata CBS138, CAGL0H06611g partial mRNA 42 1.7
13emb|CR812469.6| Zebrafish DNA sequence from clone DKEY-286F3 in ... 42 1.7
14emb|CR380954.1| Candida glabrata strain CBS138 chromosome H comp... 42 1.7
15gb|AC159151.3| Equus caballus clone CH241-268N6, complete sequence 42 1.7
16gb|AC073417.6| Homo sapiens BAC clone RP11-320I1 from 2, complet... 42 1.7
17gb|AC139720.1| Homo sapiens BAC clone RP11-223C24 from 4, comple... 42 1.7
18gb|DP000020.1| Equus caballus target 1 genomic scaffold 42 1.7
19emb|AL627211.13| Mouse DNA sequence from clone RP23-104G20 on ch... 42 1.7
20gb|AC102569.34| Mus musculus chromosome 12, clone RP23-226F7, co... 40 6.8
21gb|AC129186.3| Mus musculus BAC clone RP23-415I21 from chromosom... 40 6.8
22emb|CR293522.9| Zebrafish DNA sequence from clone DKEY-29I3 in l... 40 6.8
23ref|XM_950071.1| Theileria annulata strain Ankara hypothetical p... 40 6.8
24emb|AL593856.8| Human DNA sequence from clone RP11-8J9 on chromo... 40 6.8
25gb|AC087286.12| Homo sapiens chromosome 15, clone RP11-815J21, c... 40 6.8
26emb|AL109807.16|HSJ1185K9 Human DNA sequence from clone RP5-1185... 40 6.8
27emb|CR388002.6| Zebrafish DNA sequence from clone DKEY-75M8 in l... 40 6.8
28emb|BX927346.12| Zebrafish DNA sequence from clone CH211-168M18 ... 40 6.8
29emb|BX511162.8| Zebrafish DNA sequence from clone DKEY-240B22 in... 40 6.8
30gb|L47316.1|L47300S18 Rattus norvegicus ATP-citrate lyase (ACL) ... 40 6.8
31emb|BX294178.13| Zebrafish DNA sequence from clone CH211-271C18 ... 40 6.8
32emb|BX469907.11| Zebrafish DNA sequence from clone DKEY-32D10 in... 40 6.8
33gb|AC158354.2| Mus musculus BAC clone RP24-160P23 from chromosom... 40 6.8
34gb|AC007883.3| Homo sapiens BAC clone RP11-508L23 from 2, comple... 40 6.8
35gb|AC142097.1| Homo sapiens chromosome 8, clone XXfos-800530D9, ... 40 6.8
36gb|AC124243.3| Homo sapiens chromosome 8, clone CTD-3077F2, comp... 40 6.8
37gb|AC006380.2|AC006380 Homo sapiens BAC clone RP11-463M14 from 7... 40 6.8
38gb|AC098811.3| Papio anubis clone RP41-367L14, complete sequence 40 6.8
39emb|BX470088.11| Zebrafish DNA sequence from clone DKEY-171E12 i... 40 6.8
40emb|CR293523.11| Zebrafish DNA sequence from clone DKEY-104J7 in... 40 6.8
41emb|BX936320.11| Zebrafish DNA sequence from clone CH211-112L17 ... 40 6.8
42emb|BX005202.14| Zebrafish DNA sequence from clone DKEY-224N5 in... 40 6.8
43emb|CR376776.19| Zebrafish DNA sequence from clone CH211-13I23, ... 40 6.8
44dbj|AP006253.1| Homo sapiens genomic DNA, chromosome 8, clone:RP... 40 6.8
45emb|BX927237.15| Zebrafish DNA sequence from clone DKEY-29J9 in ... 40 6.8
46gb|CP000224.1| Drosophila melanogaster genomic scaffold 21100002... 40 6.8
47gb|L09208.1|ADLGPROC Adelaide River virus Gns protein gene, comp... 40 6.8
48gb|L09206.1|ADLGPROA Adelaide River virus G protein and Gns prot... 40 6.8
49dbj|AB020860.1| Homo sapiens genomic DNA of 8p21.3-p22 anti-onco... 40 6.8 
>ref|XM_550320.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2910

 Score =  605 bits (305), Expect = e-170
 Identities = 449/497 (90%)
 Strand = Plus / Plus

                                                                        
Query: 1    aacaattactgctgatttggaaggagcagacgtttactcatacccggaagacgatagcgt 60
            |||||||||||||||||| |||| ||||||||||| ||||||||| ||||| ||||||||
Sbjct: 824  aacaattactgctgatttagaagcagcagacgttttctcatacccagaagatgatagcgt 883

                                                                        
Query: 61   tgaagatccaatattagctcagcacttgtcacattttggtattgatttttcttcactcca 120
            |||||||||| ||||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 884  tgaagatccactattagcgcagcatttgtcacattttggtattgatttttcttcactcca 943

                                                                        
Query: 121  aaagactgagatgactactgctgaaagagaacttgaccacaacactaattttgattggaa 180
            |||||| ||||||||||||||||||||||| ||||| |||||||| |||| ||| |||||
Sbjct: 944  aaagaccgagatgactactgctgaaagagagcttgatcacaacacaaattatgactggaa 1003

                                                                        
Query: 181  tagaatacaagaaagtggcaaagatgccgaacctttatatgggccgggctatactggcct 240
            |||||||||||||||||||||||||||||||| |||||| || || || |||||||||||
Sbjct: 1004 tagaatacaagaaagtggcaaagatgccgaacttttatacggccctggttatactggcct 1063

                                                                        
Query: 241  tgtaaaccttggaaatagttgctacatggcttcagtgatgcaagttatgttttcaactca 300
            |||||| ||||||||||||||||| ||||| ||||| |||||||||||||||||||||||
Sbjct: 1064 tgtaaatcttggaaatagttgctatatggcctcagtaatgcaagttatgttttcaactca 1123

                                                                        
Query: 301  tccctttatatcacggtactttgagaagcagagcttgaaagctgcgtttgcaatttctca 360
            ||| ||||||||||| ||||||||||||||||||||||||||||| ||||||||| | | 
Sbjct: 1124 tccttttatatcacgctactttgagaagcagagcttgaaagctgcatttgcaattgcccc 1183

                                                                        
Query: 361  agctgatccaacgttggacttaaacatgcaaatgacaaagttggcccatggtatgctctc 420
            |||||||||||| |||||||| ||||||||||||||||||||||| ||||| ||||||||
Sbjct: 1184 agctgatccaacattggacttgaacatgcaaatgacaaagttggctcatggaatgctctc 1243

                                                                        
Query: 421  tggtaaatattctgcacccagtccagagggacaggaaggaatacgtccccgtatgtttaa 480
            ||| ||||| ||||  || | ||  |||||||| ||||||||||  || |||||||||||
Sbjct: 1244 tggcaaatactctgtgccaaatcaggagggacaagaaggaatacaccctcgtatgtttaa 1303

                             
Query: 481  gtcagtaattgcagcaa 497
            | |||| ||||| ||||
Sbjct: 1304 gacagttattgctgcaa 1320
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>dbj|AK103230.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033123D13, full
            insert sequence
          Length = 2910

 Score =  605 bits (305), Expect = e-170
 Identities = 449/497 (90%)
 Strand = Plus / Plus

                                                                        
Query: 1    aacaattactgctgatttggaaggagcagacgtttactcatacccggaagacgatagcgt 60
            |||||||||||||||||| |||| ||||||||||| ||||||||| ||||| ||||||||
Sbjct: 824  aacaattactgctgatttagaagcagcagacgttttctcatacccagaagatgatagcgt 883

                                                                        
Query: 61   tgaagatccaatattagctcagcacttgtcacattttggtattgatttttcttcactcca 120
            |||||||||| ||||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 884  tgaagatccactattagcgcagcatttgtcacattttggtattgatttttcttcactcca 943

                                                                        
Query: 121  aaagactgagatgactactgctgaaagagaacttgaccacaacactaattttgattggaa 180
            |||||| ||||||||||||||||||||||| ||||| |||||||| |||| ||| |||||
Sbjct: 944  aaagaccgagatgactactgctgaaagagagcttgatcacaacacaaattatgactggaa 1003

                                                                        
Query: 181  tagaatacaagaaagtggcaaagatgccgaacctttatatgggccgggctatactggcct 240
            |||||||||||||||||||||||||||||||| |||||| || || || |||||||||||
Sbjct: 1004 tagaatacaagaaagtggcaaagatgccgaacttttatacggccctggttatactggcct 1063

                                                                        
Query: 241  tgtaaaccttggaaatagttgctacatggcttcagtgatgcaagttatgttttcaactca 300
            |||||| ||||||||||||||||| ||||| ||||| |||||||||||||||||||||||
Sbjct: 1064 tgtaaatcttggaaatagttgctatatggcctcagtaatgcaagttatgttttcaactca 1123

                                                                        
Query: 301  tccctttatatcacggtactttgagaagcagagcttgaaagctgcgtttgcaatttctca 360
            ||| ||||||||||| ||||||||||||||||||||||||||||| ||||||||| | | 
Sbjct: 1124 tccttttatatcacgctactttgagaagcagagcttgaaagctgcatttgcaattgcccc 1183

                                                                        
Query: 361  agctgatccaacgttggacttaaacatgcaaatgacaaagttggcccatggtatgctctc 420
            |||||||||||| |||||||| ||||||||||||||||||||||| ||||| ||||||||
Sbjct: 1184 agctgatccaacattggacttgaacatgcaaatgacaaagttggctcatggaatgctctc 1243

                                                                        
Query: 421  tggtaaatattctgcacccagtccagagggacaggaaggaatacgtccccgtatgtttaa 480
            ||| ||||| ||||  || | ||  |||||||| ||||||||||  || |||||||||||
Sbjct: 1244 tggcaaatactctgtgccaaatcaggagggacaagaaggaatacaccctcgtatgtttaa 1303

                             
Query: 481  gtcagtaattgcagcaa 497
            | |||| ||||| ||||
Sbjct: 1304 gacagttattgctgcaa 1320
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>gb|AY105079.1| Zea mays PCO107820 mRNA sequence
          Length = 2648

 Score =  355 bits (179), Expect = 9e-95
 Identities = 371/435 (85%)
 Strand = Plus / Plus

                                                                        
Query: 1    aacaattactgctgatttggaaggagcagacgtttactcatacccggaagacgatagcgt 60
            |||||||||||||||||||||||  ||||| |||| ||| ||||| ||||| ||||| ||
Sbjct: 750  aacaattactgctgatttggaagcggcagatgttttctcgtaccctgaagatgatagtgt 809

                                                                        
Query: 61   tgaagatccaatattagctcagcacttgtcacattttggtattgatttttcttcactcca 120
            |||||||||  |||||||||||||||| |||||||||||||| |||||||||||||||||
Sbjct: 810  tgaagatccgctattagctcagcacttatcacattttggtatcgatttttcttcactcca 869

                                                                        
Query: 121  aaagactgagatgactactgctgaaagagaacttgaccacaacactaattttgattggaa 180
            |||||||||||||||||||||||| || ||||||||    ||||| |||| ||| |||||
Sbjct: 870  aaagactgagatgactactgctgagagggaacttgatgctaacacaaattatgactggaa 929

                                                                        
Query: 181  tagaatacaagaaagtggcaaagatgccgaacctttatatgggccgggctatactggcct 240
            |||||||||||||||||| ||||| || || | | | | ||| || ||||||||||| ||
Sbjct: 930  tagaatacaagaaagtggaaaagacgctgagcttctgtttggacccggctatactggtct 989

                                                                        
Query: 241  tgtaaaccttggaaatagttgctacatggcttcagtgatgcaagttatgttttcaactca 300
            ||  || ||||| ||||||||||| ||||||||| | |||||||| ||||||||||  ||
Sbjct: 990  tgcgaatcttgggaatagttgctatatggcttcaataatgcaagtcatgttttcaatcca 1049

                                                                        
Query: 301  tccctttatatcacggtactttgagaagcagagcttgaaagctgcgtttgcaatttctca 360
            ||| || |||||| ||||||| ||||| ||||| ||||||||||| ||||||| | | | 
Sbjct: 1050 tcctttcatatcaaggtacttcgagaaacagagtttgaaagctgcatttgcaactgcacc 1109

                                                                        
Query: 361  agctgatccaacgttggacttaaacatgcaaatgacaaagttggcccatggtatgctctc 420
             |||||||||||  | ||| ||||||||||| |||||||  | || |||||| |||||||
Sbjct: 1110 cgctgatccaacagtagacctaaacatgcaactgacaaaactagcgcatggtttgctctc 1169

                           
Query: 421  tggtaaatattctgc 435
            |||||||||||||||
Sbjct: 1170 tggtaaatattctgc 1184
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  174 bits (88), Expect = 2e-40
 Identities = 124/136 (91%)
 Strand = Plus / Plus

                                                                           
Query: 123     agactgagatgactactgctgaaagagaacttgaccacaacactaattttgattggaata 182
               |||| ||||||||||||||||||||||| ||||| |||||||| |||| ||| |||||||
Sbjct: 3988328 agaccgagatgactactgctgaaagagagcttgatcacaacacaaattatgactggaata 3988387

                                                                           
Query: 183     gaatacaagaaagtggcaaagatgccgaacctttatatgggccgggctatactggccttg 242
               |||||||||||||||||||||||||||||| |||||| || || || |||||||||||||
Sbjct: 3988388 gaatacaagaaagtggcaaagatgccgaacttttatacggccctggttatactggccttg 3988447

                               
Query: 243     taaaccttggaaatag 258
               |||| |||||||||||
Sbjct: 3988448 taaatcttggaaatag 3988463



 Score =  147 bits (74), Expect = 4e-32
 Identities = 92/98 (93%)
 Strand = Plus / Plus

                                                                           
Query: 27      cagacgtttactcatacccggaagacgatagcgttgaagatccaatattagctcagcact 86
               ||||||||| ||||||||| ||||| |||||||||||||||||| ||||||| ||||| |
Sbjct: 3988019 cagacgttttctcatacccagaagatgatagcgttgaagatccactattagcgcagcatt 3988078

                                                     
Query: 87      tgtcacattttggtattgatttttcttcactccaaaag 124
               ||||||||||||||||||||||||||||||||||||||
Sbjct: 3988079 tgtcacattttggtattgatttttcttcactccaaaag 3988116



 Score =  107 bits (54), Expect = 3e-20
 Identities = 72/78 (92%)
 Strand = Plus / Plus

                                                                           
Query: 317     tactttgagaagcagagcttgaaagctgcgtttgcaatttctcaagctgatccaacgttg 376
               ||||||||||||||||||||||||||||| ||||||||| | | |||||||||||| |||
Sbjct: 3988712 tactttgagaagcagagcttgaaagctgcatttgcaattgccccagctgatccaacattg 3988771

                                 
Query: 377     gacttaaacatgcaaatg 394
               ||||| ||||||||||||
Sbjct: 3988772 gacttgaacatgcaaatg 3988789



 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 57/61 (93%)
 Strand = Plus / Plus

                                                                           
Query: 257     agttgctacatggcttcagtgatgcaagttatgttttcaactcatccctttatatcacgg 316
               |||||||| ||||| ||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 3988546 agttgctatatggcctcagtaatgcaagttatgttttcaactcatccttttatatcacgg 3988605

                
Query: 317     t 317
               |
Sbjct: 3988606 t 3988606



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                        
Query: 394     gacaaagttggcccatggtatgctctctggtaaatattctg 434
               |||||||||||| ||||| ||||||||||| ||||| ||||
Sbjct: 3989333 gacaaagttggctcatggaatgctctctggcaaatactctg 3989373



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 44/51 (86%)
 Strand = Plus / Plus

                                                                  
Query: 447     agggacaggaaggaatacgtccccgtatgtttaagtcagtaattgcagcaa 497
               ||||||| ||||||||||  || |||||||||||| |||| ||||| ||||
Sbjct: 3990157 agggacaagaaggaatacaccctcgtatgtttaagacagttattgctgcaa 3990207



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 1       aacaattactgctgatttggaaggagcag 29
               |||||||||||||||||| |||| |||||
Sbjct: 3987162 aacaattactgctgatttagaagcagcag 3987190
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>dbj|AP002523.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0013F10
          Length = 163095

 Score =  174 bits (88), Expect = 2e-40
 Identities = 124/136 (91%)
 Strand = Plus / Plus

                                                                          
Query: 123    agactgagatgactactgctgaaagagaacttgaccacaacactaattttgattggaata 182
              |||| ||||||||||||||||||||||| ||||| |||||||| |||| ||| |||||||
Sbjct: 110232 agaccgagatgactactgctgaaagagagcttgatcacaacacaaattatgactggaata 110291

                                                                          
Query: 183    gaatacaagaaagtggcaaagatgccgaacctttatatgggccgggctatactggccttg 242
              |||||||||||||||||||||||||||||| |||||| || || || |||||||||||||
Sbjct: 110292 gaatacaagaaagtggcaaagatgccgaacttttatacggccctggttatactggccttg 110351

                              
Query: 243    taaaccttggaaatag 258
              |||| |||||||||||
Sbjct: 110352 taaatcttggaaatag 110367



 Score =  147 bits (74), Expect = 4e-32
 Identities = 92/98 (93%)
 Strand = Plus / Plus

                                                                          
Query: 27     cagacgtttactcatacccggaagacgatagcgttgaagatccaatattagctcagcact 86
              ||||||||| ||||||||| ||||| |||||||||||||||||| ||||||| ||||| |
Sbjct: 109923 cagacgttttctcatacccagaagatgatagcgttgaagatccactattagcgcagcatt 109982

                                                    
Query: 87     tgtcacattttggtattgatttttcttcactccaaaag 124
              ||||||||||||||||||||||||||||||||||||||
Sbjct: 109983 tgtcacattttggtattgatttttcttcactccaaaag 110020



 Score =  107 bits (54), Expect = 3e-20
 Identities = 72/78 (92%)
 Strand = Plus / Plus

                                                                          
Query: 317    tactttgagaagcagagcttgaaagctgcgtttgcaatttctcaagctgatccaacgttg 376
              ||||||||||||||||||||||||||||| ||||||||| | | |||||||||||| |||
Sbjct: 110616 tactttgagaagcagagcttgaaagctgcatttgcaattgccccagctgatccaacattg 110675

                                
Query: 377    gacttaaacatgcaaatg 394
              ||||| ||||||||||||
Sbjct: 110676 gacttgaacatgcaaatg 110693



 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 57/61 (93%)
 Strand = Plus / Plus

                                                                          
Query: 257    agttgctacatggcttcagtgatgcaagttatgttttcaactcatccctttatatcacgg 316
              |||||||| ||||| ||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 110450 agttgctatatggcctcagtaatgcaagttatgttttcaactcatccttttatatcacgg 110509

               
Query: 317    t 317
              |
Sbjct: 110510 t 110510



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                       
Query: 394    gacaaagttggcccatggtatgctctctggtaaatattctg 434
              |||||||||||| ||||| ||||||||||| ||||| ||||
Sbjct: 111237 gacaaagttggctcatggaatgctctctggcaaatactctg 111277



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 44/51 (86%)
 Strand = Plus / Plus

                                                                 
Query: 447    agggacaggaaggaatacgtccccgtatgtttaagtcagtaattgcagcaa 497
              ||||||| ||||||||||  || |||||||||||| |||| ||||| ||||
Sbjct: 112061 agggacaagaaggaatacaccctcgtatgtttaagacagttattgctgcaa 112111



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 1      aacaattactgctgatttggaaggagcag 29
              |||||||||||||||||| |||| |||||
Sbjct: 109066 aacaattactgctgatttagaagcagcag 109094
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>gb|AC130811.22| Medicago truncatula clone mth2-26b4, complete sequence
          Length = 139970

 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 67/76 (88%)
 Strand = Plus / Plus

                                                                         
Query: 123   agactgagatgactactgctgaaagagaacttgaccacaacactaattttgattggaata 182
             ||||||| |||||||| ||||||| |||||| ||||| || || |||||||| |||||||
Sbjct: 31376 agactgaaatgactacggctgaaaaagaactcgaccaaaataccaattttgagtggaata 31435

                             
Query: 183   gaatacaagaaagtgg 198
             |||| |||||||||||
Sbjct: 31436 gaatccaagaaagtgg 31451
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>ref|NM_112954.2| Arabidopsis thaliana UBP14 (UBIQUITIN-SPECIFIC PROTEASE 14);
           ubiquitin-specific protease AT3G20630 (UBP14) mRNA,
           complete cds
          Length = 2394

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 72/83 (86%)
 Strand = Plus / Plus

                                                                       
Query: 122 aagactgagatgactactgctgaaagagaacttgaccacaacactaattttgattggaat 181
           |||||||| ||||| |||||||||||||||||||| || || || |||||||||||||| 
Sbjct: 811 aagactgaaatgacaactgctgaaagagaacttgatcaaaatacaaattttgattggaac 870

                                  
Query: 182 agaatacaagaaagtggcaaaga 204
            | |||||||| ||||| |||||
Sbjct: 871 cgtatacaagagagtggaaaaga 893
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>gb|AY140096.1| Arabidopsis thaliana ubiquitin-specific protease 14 (UBP14),
           putative (At3g20625:At3g20630) mRNA, complete cds
          Length = 2664

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 72/83 (86%)
 Strand = Plus / Plus

                                                                       
Query: 122 aagactgagatgactactgctgaaagagaacttgaccacaacactaattttgattggaat 181
           |||||||| ||||| |||||||||||||||||||| || || || |||||||||||||| 
Sbjct: 873 aagactgaaatgacaactgctgaaagagaacttgatcaaaatacaaattttgattggaac 932

                                  
Query: 182 agaatacaagaaagtggcaaaga 204
            | |||||||| ||||| |||||
Sbjct: 933 cgtatacaagagagtggaaaaga 955
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>gb|AF302664.1|AF302664 Arabidopsis thaliana ubiquitin-specific protease 14 (UBP14) mRNA,
           complete cds
          Length = 2394

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 72/83 (86%)
 Strand = Plus / Plus

                                                                       
Query: 122 aagactgagatgactactgctgaaagagaacttgaccacaacactaattttgattggaat 181
           |||||||| ||||| |||||||||||||||||||| || || || |||||||||||||| 
Sbjct: 811 aagactgaaatgacaactgctgaaagagaacttgatcaaaatacaaattttgattggaac 870

                                  
Query: 182 agaatacaagaaagtggcaaaga 204
            | |||||||| ||||| |||||
Sbjct: 871 cgtatacaagagagtggaaaaga 893
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>dbj|AP002034.1| Arabidopsis thaliana genomic DNA, chromosome 3, BAC clone: F3H11
          Length = 33442

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 71/82 (86%)
 Strand = Plus / Minus

                                                                       
Query: 123 agactgagatgactactgctgaaagagaacttgaccacaacactaattttgattggaata 182
           ||||||| ||||| |||||||||||||||||||| || || || ||||||||||||||  
Sbjct: 321 agactgaaatgacaactgctgaaagagaacttgatcaaaatacaaattttgattggaacc 262

                                 
Query: 183 gaatacaagaaagtggcaaaga 204
           | |||||||| ||||| |||||
Sbjct: 261 gtatacaagagagtggaaaaga 240
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>gb|AC092100.5| Homo sapiens BAC clone RP11-666G4 from 7, complete sequence
          Length = 122099

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 105   atttttcttcactccaaaagactgagatga 134
             |||||||||  |||||||||||||||||||
Sbjct: 50132 atttttcttttctccaaaagactgagatga 50103
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>ref|XM_447083.1| Candida glabrata CBS138, CAGL0H06611g partial mRNA
          Length = 3849

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 411  gtatgctctctggtaaatatt 431
            |||||||||||||||||||||
Sbjct: 1497 gtatgctctctggtaaatatt 1477
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>emb|CR812469.6| Zebrafish DNA sequence from clone DKEY-286F3 in linkage group 5, complete
              sequence
          Length = 162086

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 393    tgacaaagttggcccatggta 413
              |||||||||||||||||||||
Sbjct: 138803 tgacaaagttggcccatggta 138783
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>emb|CR380954.1| Candida glabrata strain CBS138 chromosome H complete sequence
          Length = 1050361

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 411    gtatgctctctggtaaatatt 431
              |||||||||||||||||||||
Sbjct: 654968 gtatgctctctggtaaatatt 654948
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>gb|AC159151.3| Equus caballus clone CH241-268N6, complete sequence
          Length = 123244

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 381   taaacatgcaaatgacaaagt 401
             |||||||||||||||||||||
Sbjct: 56566 taaacatgcaaatgacaaagt 56586
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>gb|AC073417.6| Homo sapiens BAC clone RP11-320I1 from 2, complete sequence
          Length = 35688

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 373  gttggacttaaacatgcaaat 393
            |||||||||||||||||||||
Sbjct: 9146 gttggacttaaacatgcaaat 9126
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>gb|AC139720.1| Homo sapiens BAC clone RP11-223C24 from 4, complete sequence
          Length = 160940

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 166    taattttgattggaatagaat 186
              |||||||||||||||||||||
Sbjct: 129161 taattttgattggaatagaat 129141
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>gb|DP000020.1| Equus caballus target 1 genomic scaffold
          Length = 1907055

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 381     taaacatgcaaatgacaaagt 401
               |||||||||||||||||||||
Sbjct: 1840377 taaacatgcaaatgacaaagt 1840397
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>emb|AL627211.13| Mouse DNA sequence from clone RP23-104G20 on chromosome 4, complete
             sequence
          Length = 216944

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 80    cagcacttgtcacattttggt 100
             |||||||||||||||||||||
Sbjct: 97134 cagcacttgtcacattttggt 97114
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>gb|AC102569.34| Mus musculus chromosome 12, clone RP23-226F7, complete sequence
          Length = 167957

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 106   tttttcttcactccaaaaga 125
             ||||||||||||||||||||
Sbjct: 17947 tttttcttcactccaaaaga 17928
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>gb|AC129186.3| Mus musculus BAC clone RP23-415I21 from chromosome 16, complete
             sequence
          Length = 209432

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 282   aagttatgttttcaactcatccct 305
             |||||||||||||||||| |||||
Sbjct: 85817 aagttatgttttcaactcctccct 85840
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>emb|CR293522.9| Zebrafish DNA sequence from clone DKEY-29I3 in linkage group 7, complete
              sequence
          Length = 196250

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 394    gacaaagttggcccatggta 413
              ||||||||||||||||||||
Sbjct: 185904 gacaaagttggcccatggta 185923
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>ref|XM_950071.1| Theileria annulata strain Ankara hypothetical protein (TA04725)
            partial mRNA
          Length = 3558

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 168  attttgattggaatagaata 187
            ||||||||||||||||||||
Sbjct: 1185 attttgattggaatagaata 1166
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>emb|AL593856.8| Human DNA sequence from clone RP11-8J9 on chromosome 1 Contains the
            5' end of the ATPAF1 gene for ATP synthase mitochondrial
            F1 complex assembly factor 1, a secreted protein of
            unknown function (SPUF) pseudogene, three novel genes,
            gene KIAA0494, a novel pseudogene and the 5' end of the
            CYP4B1 gene for cytochrome P450 family 4 subfamily B
            polypeptide 1, complete sequence
          Length = 157373

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 74   ttagctcagcacttgtcaca 93
            ||||||||||||||||||||
Sbjct: 8100 ttagctcagcacttgtcaca 8119
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>gb|AC087286.12| Homo sapiens chromosome 15, clone RP11-815J21, complete sequence
          Length = 193549

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 8      actgctgatttggaaggagc 27
              ||||||||||||||||||||
Sbjct: 141374 actgctgatttggaaggagc 141355
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>emb|AL109807.16|HSJ1185K9 Human DNA sequence from clone RP5-1185K9 on chromosome 20 Contains a
             novel gene, complete sequence
          Length = 114007

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 114   cactccaaaagactgagatgacta 137
             ||||||| ||||||||||||||||
Sbjct: 50492 cactccacaagactgagatgacta 50515
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>emb|CR388002.6| Zebrafish DNA sequence from clone DKEY-75M8 in linkage group 1,
             complete sequence
          Length = 228120

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 394   gacaaagttggcccatggta 413
             ||||||||||||||||||||
Sbjct: 96036 gacaaagttggcccatggta 96055
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>emb|BX927346.12| Zebrafish DNA sequence from clone CH211-168M18 in linkage group 5,
              complete sequence
          Length = 141135

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 394    gacaaagttggcccatggta 413
              ||||||||||||||||||||
Sbjct: 118391 gacaaagttggcccatggta 118372
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>emb|BX511162.8| Zebrafish DNA sequence from clone DKEY-240B22 in linkage group 1,
             complete sequence
          Length = 119612

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 394   gacaaagttggcccatggta 413
             ||||||||||||||||||||
Sbjct: 72930 gacaaagttggcccatggta 72911
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>gb|L47316.1|L47300S18 Rattus norvegicus ATP-citrate lyase (ACL) gene, exon 26
          Length = 377

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 85  cttgtcacattttggtattgattt 108
           |||||| |||||||||||||||||
Sbjct: 185 cttgtcccattttggtattgattt 208
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>emb|BX294178.13| Zebrafish DNA sequence from clone CH211-271C18 in linkage group 7,
             complete sequence
          Length = 131441

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 394   gacaaagttggcccatggta 413
             ||||||||||||||||||||
Sbjct: 16272 gacaaagttggcccatggta 16253
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>emb|BX469907.11| Zebrafish DNA sequence from clone DKEY-32D10 in linkage group 5, complete
              sequence
          Length = 162623

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 394    gacaaagttggcccatggta 413
              ||||||||||||||||||||
Sbjct: 145498 gacaaagttggcccatggta 145479
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>gb|AC158354.2| Mus musculus BAC clone RP24-160P23 from chromosome 12, complete
             sequence
          Length = 178034

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 106   tttttcttcactccaaaaga 125
             ||||||||||||||||||||
Sbjct: 10844 tttttcttcactccaaaaga 10863
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>gb|AC007883.3| Homo sapiens BAC clone RP11-508L23 from 2, complete sequence
          Length = 113189

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 276   tgatgcaagttatgttttca 295
             ||||||||||||||||||||
Sbjct: 19514 tgatgcaagttatgttttca 19533
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>gb|AC142097.1| Homo sapiens chromosome 8, clone XXfos-800530D9, complete sequence
          Length = 40589

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 184   aatacaagaaagtggcaaag 203
             ||||||||||||||||||||
Sbjct: 30420 aatacaagaaagtggcaaag 30401
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>gb|AC124243.3| Homo sapiens chromosome 8, clone CTD-3077F2, complete sequence
          Length = 188240

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 184    aatacaagaaagtggcaaag 203
              ||||||||||||||||||||
Sbjct: 161643 aatacaagaaagtggcaaag 161662
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>gb|AC006380.2|AC006380 Homo sapiens BAC clone RP11-463M14 from 7q15.1-p13, complete sequence
          Length = 120429

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 283  agttatgttttcaactcatc 302
            ||||||||||||||||||||
Sbjct: 5733 agttatgttttcaactcatc 5714
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>gb|AC098811.3| Papio anubis clone RP41-367L14, complete sequence
          Length = 182644

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 283   agttatgttttcaactcatc 302
             ||||||||||||||||||||
Sbjct: 26571 agttatgttttcaactcatc 26552
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>emb|BX470088.11| Zebrafish DNA sequence from clone DKEY-171E12 in linkage group 7,
             complete sequence
          Length = 102546

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 394   gacaaagttggcccatggta 413
             ||||||||||||||||||||
Sbjct: 76348 gacaaagttggcccatggta 76329
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>emb|CR293523.11| Zebrafish DNA sequence from clone DKEY-104J7 in linkage group 7,
             complete sequence
          Length = 214581

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 394   gacaaagttggcccatggta 413
             ||||||||||||||||||||
Sbjct: 67312 gacaaagttggcccatggta 67293
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>emb|BX936320.11| Zebrafish DNA sequence from clone CH211-112L17 in linkage group 21,
             complete sequence
          Length = 114670

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 394   gacaaagttggcccatggta 413
             ||||||||||||||||||||
Sbjct: 79200 gacaaagttggcccatggta 79181
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>emb|BX005202.14| Zebrafish DNA sequence from clone DKEY-224N5 in linkage group 13,
             complete sequence
          Length = 220733

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 394   gacaaagttggcccatggta 413
             ||||||||||||||||||||
Sbjct: 27152 gacaaagttggcccatggta 27133
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>emb|CR376776.19| Zebrafish DNA sequence from clone CH211-13I23, complete sequence
          Length = 179675

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 394    gacaaagttggcccatggta 413
              ||||||||||||||||||||
Sbjct: 118571 gacaaagttggcccatggta 118552
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>dbj|AP006253.1| Homo sapiens genomic DNA, chromosome 8, clone:RP11-85A6, complete
             sequence
          Length = 130487

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 184   aatacaagaaagtggcaaag 203
             ||||||||||||||||||||
Sbjct: 55114 aatacaagaaagtggcaaag 55095
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>emb|BX927237.15| Zebrafish DNA sequence from clone DKEY-29J9 in linkage group 21, complete
              sequence
          Length = 208942

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 394    gacaaagttggcccatggta 413
              ||||||||||||||||||||
Sbjct: 179264 gacaaagttggcccatggta 179245
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>gb|CP000224.1| Drosophila melanogaster genomic scaffold 211000022280794
          Length = 474727

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 93     attttggtattgatttttct 112
              ||||||||||||||||||||
Sbjct: 360155 attttggtattgatttttct 360174
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>gb|L09208.1|ADLGPROC Adelaide River virus Gns protein gene, complete cds
          Length = 1867

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 89  tcacattttggtattgattt 108
           ||||||||||||||||||||
Sbjct: 828 tcacattttggtattgattt 809
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>gb|L09206.1|ADLGPROA Adelaide River virus G protein and Gns protein genes, complete cds's
          Length = 3914

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 89   tcacattttggtattgattt 108
            ||||||||||||||||||||
Sbjct: 2861 tcacattttggtattgattt 2842
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>dbj|AB020860.1| Homo sapiens genomic DNA of 8p21.3-p22 anti-oncogene of hepatocellular
             colorectal and non-small cell lung cancer , segment 3/11
          Length = 100000

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 184   aatacaagaaagtggcaaag 203
             ||||||||||||||||||||
Sbjct: 83914 aatacaagaaagtggcaaag 83895


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,943,217
Number of Sequences: 3902068
Number of extensions: 4943217
Number of successful extensions: 103379
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 103207
Number of HSP's gapped (non-prelim): 167
length of query: 502
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 480
effective length of database: 17,147,199,772
effective search space: 8230655890560
effective search space used: 8230655890560
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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